snoRNA: U14
Target rRNA methyl site: Cm414
>> U14 31.70 (11-133) Cmpl: ySc-18S-Cm414 (U14) 13/1 bp Gs-D box: 114 (104) Len: 123 TS
C Box: GUGAUGA Sc: 10.76 (15-21) C-D box dist: 106 bp
D Box: CUGA Sc: 8.05
D'Box: None D box Guide Transit Sc: -1.44
Meth site found: 414 (U14) Guide Seq Sc: 12.44 (22.98 -1.47 -7.36 -1.72)
*
Db seq: 5'- ACAUCCAAGGAAGG -3' ySc-18S (410-424)
|||||| |||||||
Qry seq: 3'- AGUCUGUAGGAUCCUUCC -5' U14 (127-114)
C Box-> Guide Seq Gap Sc: -4.08 (92 bp)
Strong terminal stem: +-[C Box] -N- CACUAGUA - 5' Stem Sc: 7.09 (8 bp)
| ||||||:|
+---[D Box] - GUGAUCGU - 3' Stem Transit Sc: -1.11
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D Bx] Length
>Meth Cm 414 [GUGAUGA] -- 92 bp -- [ 13 / 1 ] 0 [CUGA] 123 bp
>Sc 31.70 [ 10.76 ] -- -4.08 -- [ 22.98 bits ] [8.05]
Seq: >U14 31.70 (11-133) Cmpl: ySc-18S-Cm414 Len: 123
Seq: CACGGUGAUGAAAGACUGGUUCCUUAACAUUCGCAGUUUCCACGGUAGGAGUACGCUUAC
Seq: GAACCCAUCGUUAGUACUCUCGGUGACCGCUCUUCUUUAGAGACCUUCCUAGGAUGUCUG
Seq: AGU
====================================================================================================
snoRNA: U18
Target rRNA methyl site: Am647
>> U18 34.96 (11-112) Cmpl: ySc-25S-Am647 (U18) 15/0 bp Gs-DpBox: 29 (19) Len: 102
C Box: AUGAUGA Sc: 12.73 (15-21) C-D box dist: 85 bp
D Box: CUGA Sc: 8.05
D'Box: AUGA Sc: 3.82 D'box Guide Transit Sc: -0.67
Meth site found: 647 (U18) Guide Seq Sc: 15.67 (25.50 -1.47 -7.36 -1.00)
*
Db seq: 5'- AACACGGACCAAGGA -3' ySc-25S (644-659)
||||||||||||:||
Qry seq: 3'- AGUAUUUGUGCCUGGUUUCU -5' U18 (43-29)
C Box-> Guide Seq Gap Sc: -1.59 (7 bp) Guide Seq-> D Box Gap Sc: -2.16 (58 bp)
Possible terminal stem: +-[C Box] -N-GUGUAUUC - 5' Stem Sc: -0.13 (4 bp)
| |||:
+---[D Box] - CGAUAGCA - 3' Stem Transit Sc: -0.90
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D'Bx] -- -- [D Bx] Length
>Meth Am 647 [AUGAUGA] -- 7 bp -- [ 15 / 0 ] 1 [AUGA] -- 58 bp -- [CUGA] 102 bp
>Sc 34.96 [ 12.73 ] -- -1.59 -- [ 25.50 bits ] [3.82] -2.16 [8.05]
Seq: >U18 34.96 (11-112) Cmpl: ySc-25S-Am647 Len: 102
Seq: GUGAAUGAUGAAUUUAAUUCUUUGGUCCGUGUUUAUGAUGGGAAGUAAGACCCCCGAUAU
Seq: GAGUGACAAAAGAGAUGUGGUUGACUAUCACAGUAUCUGACG
====================================================================================================
snoRNA: U24
Target rRNA methyl site: Am1447
>> U24 32.40 (11-97) Cmpl: ySc-25S-Am1447 (U24) 12/0 bp Gs-DpBox: 28 (18) Len: 87 TS
C Box: AUGAUGU Sc: 7.48 (15-21) C-D box dist: 70 bp
D Box: CUGA Sc: 8.05
D'Box: CAGA Sc: 3.94 D'box Guide Transit Sc: -0.67
Meth site found: 1447 (U24) Guide Seq Sc: 11.88 (21.36 -1.12 -7.36 -1.00)
*
Db seq: 5'- AGUAGCAAAUAU -3' ySc-25S (1444-1455)
||||||||||||
Qry seq: 3'- AGACUUCAUCGUUUAUA -5' U24 (39-28)
C Box-> Guide Seq Gap Sc: -1.59 (6 bp) Guide Seq-> D Box Gap Sc: -2.44 (47 bp)
Strong terminal stem: +-[C Box] -N- ACUUACCG - 5' Stem Sc: 6.84 (7 bp)
| |||||||:
+---[D Box] - UGAAUGGU - 3' Stem Transit Sc: -1.11
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D'Bx] -- -- [D Bx] Length
>Meth Am1447 [AUGAUGU] -- 6 bp -- [ 12 / 0 ] 1 [CAGA] -- 47 bp -- [CUGA] 87 bp
>Sc 32.40 [ 7.48 ] -- -1.59 -- [ 21.36 bits ] [3.94] -2.44 [8.05]
Seq: >U24 32.40 (11-97) Cmpl: ySc-25S-Am1447 Len: 87
Seq: UCAAAUGAUGUAAUAACAUAUUUGCUACUUCAGAUGGAACUUUGAGUUCCGAAUGAGACA
Seq: UACCAAUUAUCACCAAGAUCUCUGAUG
====================================================================================================
snoRNA: U24
Target rRNA methyl site: Cm1435
>> U24 29.82 (11-97) Cmpl: ySc-25S-Cm1435 (U24) 14/0 bp Gs-D box: 78 (68) Len: 87 TS
C Box: AUGAUGU Sc: 7.48 (15-21) C-D box dist: 70 bp
D Box: CUGA Sc: 8.05
D'Box: None D box Guide Transit Sc: -1.44
Meth site found: 1435 (U24) Guide Seq Sc: 11.49 (22.04 -1.47 -7.36 -1.72)
*
Db seq: 5'- AGAUCUUGGUGGUA -3' ySc-25S (1431-1449)
|||||||||||:||
Qry seq: 3'- AGUCUCUAGAACCACUAU -5' U24 (91-78)
C Box-> Guide Seq Gap Sc: -1.50 (56 bp)
Strong terminal stem: +-[C Box] -N- ACUUACCG - 5' Stem Sc: 6.84 (7 bp)
| |||||||:
+---[D Box] - UGAAUGGU - 3' Stem Transit Sc: -1.11
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D Bx] Length
>Meth Cm1435 [AUGAUGU] -- 56 bp -- [ 14 / 0 ] 0 [CUGA] 87 bp
>Sc 29.82 [ 7.48 ] -- -1.50 -- [ 22.04 bits ] [8.05]
Seq: >U24 29.82 (11-97) Cmpl: ySc-25S-Cm1435 Len: 87
Seq: UCAAAUGAUGUAAUAACAUAUUUGCUACUUCAGAUGGAACUUUGAGUUCCGAAUGAGACA
Seq: UACCAAUUAUCACCAAGAUCUCUGAUG
====================================================================================================
snoRNA: snR13
Target rRNA methyl site: Am2278
>> snR13 24.96 (11-117) Cmpl: ySc-25S-Am2278 (snR13) 10/0 bp Gs-DpBox: 30 (20) Len: 107
C Box: AUGAUGA Sc: 12.73 (15-21) C-D box dist: 90 bp
D Box: CUGA Sc: 8.05
D'Box: UCGA Sc: 1.72 D'box Guide Transit Sc: -0.67
Meth site found: 2278 (snR13) Guide Seq Sc: 8.77 (19.60 -1.12 -7.36 -2.35)
*
Db seq: 5'- AGCCAAAUGC -3' ySc-25S (2273-2284)
||||||||||
Qry seq: 3'- AGCUCGGUUUACG -5' snR13 (39-30)
C Box-> Guide Seq Gap Sc: -1.59 (8 bp) Guide Seq-> D Box Gap Sc: -3.16 (69 bp)
No terminal stem: +-[C Box] -N- AUUUUUCC - 5' Stem Sc: -3.17 (0 bp)
| |
+---[D Box] - CCUUUUAA - 3' Stem Transit Sc: -0.90
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D'Bx] -- -- [D Bx] Length
>Meth Am2278 [AUGAUGA] -- 8 bp -- [ 10 / 0 ] -1 [UCGA] -- 69 bp -- [CUGA] 107 bp
>Sc 24.96 [ 12.73 ] -- -1.59 -- [ 19.60 bits ] [1.72] -3.16 [8.05]
Seq: >snR13 24.96 (11-117) Cmpl: ySc-25S-Am2278 Len: 107
Seq: UUAUAUGAUGAAUAUGAGUGCAUUUGGCUCGAGUUGCUGUUUGGCUUUUGCCAAAUCAGU
Seq: AACGGUGUGGAAAAACUCAAGCUACCUUUUUUUACUUUUAUCUGACC
====================================================================================================
snoRNA: snR190
Target rRNA methyl site: Gm2393
>> snR190 12.80 (1-189) Cmpl: ySc-25S-Gm2393 (-) 13/0 bp Gs-DpBox: 22 (22) Len: 189 TS
C Box: CUGAUGA Sc: 8.44 (5-11) C-D box dist: 172 bp
D Box: CUGA Sc: 8.05
D'Box: CCGA Sc: 5.24 D'box Guide Transit Sc: -0.67
No known meth site found Guide Seq Sc: 0.78 (21.35 -1.47 -18.10 -1.00) Len= 13
*
Db seq: 5'- CGGGGAAAGAAGA -3' ySc-25S (2390-2405)
||:||||||||||
Qry seq: 3'- AGCCUGCUCCUUUCUUCU -5' Sc-snR190 (34-22)
C Box-> Guide Seq Gap Sc: -1.59 (10 bp) Guide Seq-> D Box Gap Sc: -8.08 (144 bp)
Terminal stem: +-[C Box] -N- CGG - 5' Stem Sc: 1.74 (3 bp)
| |||
+---[D Box] - GCC - 3' Stem Transit Sc: -1.11
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D'Bx] -- -- [D Bx] Length
>Meth Gm2393 [CUGAUGA] -- 10 bp -- [ 13 / 0 ] 1 [CCGA] -- 144 bp -- [CUGA] 189 bp
>Sc 12.80 [ 8.44 ] -- -1.59 -- [ 21.35 bits ] [5.24] -8.08 [8.05]
====================================================================================================
snoRNA: snR38
Target rRNA methyl site: Gm2812
>> snR38 43.55 (11-105) Cmpl: ySc-25S-Gm2812 (snR38) 13/0 bp Gs-DpBox: 39 (29) Len: 95 TS
C Box: AUGAUGA Sc: 12.73 (15-21) C-D box dist: 78 bp
D Box: CUGA Sc: 8.05
D'Box: CUGA Sc: 7.34 D'box Guide Transit Sc: -0.67
Meth site found: 2812 (snR38) Guide Seq Sc: 14.41 (24.96 -1.47 -7.36 -1.72)
*
Db seq: 5'- ACAGGGAUAACUG -3' ySc-25S (2808-2823)
|||||||||||||
Qry seq: 3'- AGUCUGUCCCUAUUGAC -5' snR38 (51-39)
C Box-> Guide Seq Gap Sc: -1.76 (17 bp) Guide Seq-> D Box Gap Sc: -1.59 (44 bp)
Strong terminal stem: +-[C Box] -N- UACAAAGC - 5' Stem Sc: 6.14 (7 bp)
| |||||||
+---[D Box] - UAUGUUUC - 3' Stem Transit Sc: -1.11
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D'Bx] -- -- [D Bx] Length
>Meth Gm2812 [AUGAUGA] -- 17 bp -- [ 13 / 0 ] 0 [CUGA] -- 44 bp -- [CUGA] 95 bp
>Sc 43.55 [ 12.73 ] -- -1.76 -- [ 24.96 bits ] [7.34] -1.59 [8.05]
Seq: >snR38 43.55 (11-105) Cmpl: ySc-25S-Gm2812 Len: 95
Seq: CAUAAUGAUGAAAAAAAAUUUUAUCAAACAGUUAUCCCUGUCUGAAUGGGUAAUAAUAGG
Seq: UAACCUCUCAUAUGUUGAUAUUUGUAUUUCUGAUA
====================================================================================================
snoRNA: snR39
Target rRNA methyl site: Am805
>> snR39 32.23 (11-99) Cmpl: ySc-25S-Am805 (snR39/snR59) 13/0 bp Gs-D box: 80 (70) Len: 89 TS
C Box: AUGAUGA Sc: 12.73 (15-21) C-D box dist: 72 bp
D Box: CUGA Sc: 8.05
D'Box: None D box Guide Transit Sc: -1.44
Meth site found: 805 (snR39/snR59) Guide Seq Sc: 15.04 (24.87 -1.47 -7.36 -1.00)
*
Db seq: 5'- CGAAAGAUGGUGA -3' ySc-25S (802-816)
|||||||||||||
Qry seq: 3'- AGUCAGCUUUCUACCACU -5' snR39 (92-80)
C Box-> Guide Seq Gap Sc: -1.50 (58 bp)
Terminal stem: +-[C Box] -N- UUUACUCU - 5' Stem Sc: 0.45 (5 bp)
| || |||
+---[D Box] - UUAUAAGA - 3' Stem Transit Sc: -1.11
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D Bx] Length
>Meth Am 805 [AUGAUGA] -- 58 bp -- [ 13 / 0 ] 1 [CUGA] 89 bp
>Sc 32.23 [ 12.73 ] -- -1.50 -- [ 24.87 bits ] [8.05]
Seq: >snR39 32.23 (11-99) Cmpl: ySc-25S-Am805 Len: 89
Seq: UUUUAUGAUGAAAAUCCAUUGUAUCCCAAUACAUAUUCGACUAGUCAUUGACGAUGCUGU
Seq: CGUAACUUAUCACCAUCUUUCGACUGAUU
====================================================================================================
snoRNA: snR39b
Target rRNA methyl site: Gm803
>> snR39b 33.04 (11-105) Cmpl: ySc-25S-Gm803 (snR39b) 14/0 bp Gs-D box: 85 (75) Len: 95
C Box: GUGAUGA Sc: 10.76 (15-21) C-D box dist: 78 bp
D Box: CUGA Sc: 8.05
D'Box: None D box Guide Transit Sc: -1.44
Meth site found: 803 (snR39b) Guide Seq Sc: 18.06 (27.89 -1.47 -7.36 -1.00)
*
Db seq: 5'- CCCGAAAGAUGGUG -3' ySc-25S (800-817)
||||||||||||||
Qry seq: 3'- AGUCGGGGCUUUCUACCAC -5' snR39b (98-85)
C Box-> Guide Seq Gap Sc: -1.50 (63 bp)
Possible terminal stem: +-[C Box] -N- UUUAUUUA - 5' Stem Sc: -0.96 (5 bp)
| | | |||
+---[D Box] - UAUUUAAU - 3' Stem Transit Sc: -0.90
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D Bx] Length
>Meth Gm 803 [GUGAUGA] -- 63 bp -- [ 14 / 0 ] 1 [CUGA] 95 bp
>Sc 33.04 [ 10.76 ] -- -1.50 -- [ 27.89 bits ] [8.05]
Seq: >snR39b 33.04 (11-105) Cmpl: ySc-25S-Gm803 Len: 95
Seq: UUUAGUGAUGAUACUGCCGAUUCUGGCAUUCCAAAAAGUGACUAGCAAAAUUGCGAUGUU
Seq: GUCAACUUAAAUUACACCAUCUUUCGGGGCUGAUA
====================================================================================================
snoRNA: snR40
Target rRNA methyl site: Um896
>> snR40 28.23 (11-107) Cmpl: ySc-25S-Um896 (snR40) 12/0 bp Gs-D box: 89 (79) Len: 97 TS
C Box: AUGACGA Sc: 8.23 (15-21) C-D box dist: 80 bp
D Box: CUGA Sc: 8.05
D'Box: None D box Guide Transit Sc: -1.44
Meth site found: 896 (snR40) Guide Seq Sc: 11.65 (21.13 -1.12 -7.36 -1.00)
*
Db seq: 5'- AAUUUGGGUAUA -3' ySc-25S (893-906)
||||||||||||
Qry seq: 3'- AGUCUUUAAACCCAUAU -5' snR40 (100-89)
C Box-> Guide Seq Gap Sc: -1.50 (67 bp)
Strong terminal stem: +-[C Box] -N-AUGGUAAA - 5' Stem Sc: 4.34 (6 bp)
| ||||||
+---[D Box] - UCCAUUUU - 3' Stem Transit Sc: -1.11
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D Bx] Length
>Meth Um 896 [AUGACGA] -- 67 bp -- [ 12 / 0 ] 1 [CUGA] 97 bp
>Sc 28.23 [ 8.23 ] -- -1.50 -- [ 21.13 bits ] [8.05]
Seq: >snR40 28.23 (11-107) Cmpl: ySc-25S-Um896 Len: 97
Seq: GUAAAUGACGAGAAAAAAGCUGUGCACCAGUCUGAACAUGGAUGCCACAAGUACUCAGGU
Seq: GUCCUAUGAAGCAUUAAGUAUACCCAAAUUUCUGAUC
====================================================================================================
snoRNA: snR40
Target rRNA methyl site: Gm1267
>> snR40 25.91 (11-107) Cmpl: ySc-18S-Gm1267 (snR40) 11/1 bp Gs-DpBox: 29 (19) Len: 97 TS
C Box: AUGACGA Sc: 8.23 (15-21) C-D box dist: 80 bp
D Box: CUGA Sc: 8.05
D'Box: CUGA Sc: 7.34 D'box Guide Transit Sc: -0.67
Meth site found: 1267 (snR40) Guide Seq Sc: 3.48 (12.96 -1.12 -7.36 -1.00)
*
Db seq: 5'- GUGGUGCAUGGC -3' ySc-18S (1266-1278)
|||||||::||
Qry seq: 3'- AGUCUGACCACGUGUCG -5' snR40 (40-29)
C Box-> Guide Seq Gap Sc: -1.59 (7 bp) Guide Seq-> D Box Gap Sc: -2.16 (56 bp)
Strong terminal stem: +-[C Box] -N-AUGGUAAA - 5' Stem Sc: 4.34 (6 bp)
| ||||||
+---[D Box] - UCCAUUUU - 3' Stem Transit Sc: -1.11
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D'Bx] -- -- [D Bx] Length
>Meth Gm1267 [AUGACGA] -- 7 bp -- [ 11 / 1 ] 1 [CUGA] -- 56 bp -- [CUGA] 97 bp
>Sc 25.91 [ 8.23 ] -- -1.59 -- [ 12.96 bits ] [7.34] -2.16 [8.05]
Seq: >snR40 25.91 (11-107) Cmpl: ySc-18S-Gm1267 Len: 97
Seq: GUAAAUGACGAGAAAAAAGCUGUGCACCAGUCUGAACAUGGAUGCCACAAGUACUCAGGU
Seq: GUCCUAUGAAGCAUUAAGUAUACCCAAAUUUCUGAUC
====================================================================================================
snoRNA: snR41
Target rRNA methyl site: Gm1123
>> snR41 33.83 (11-115) Cmpl: ySc-18S-Gm1123 (snR41) 20/1 bp Gs-D box: 88 (78) Len: 105 TS
C Box: AUGAUUA Sc: 7.81 (15-21) C-D box dist: 88 bp
D Box: AUGA Sc: 5.43
D'Box: None D box Guide Transit Sc: -1.44
Meth site found: 1123 (snR41) Guide Seq Sc: 18.96 (31.37 -4.05 -7.36 -1.00)
*
Db seq: 5'- CAAGGCUGAAACUUAAAGGAA -3' ySc-18S (1124-1145)
|||||||||||||||| |:||
Qry seq: 3'- AGUAUGUUCCGACUUUGAAUUGCUUU -5' snR41 (108-88)
C Box-> Guide Seq Gap Sc: -1.50 (66 bp)
Strong terminal stem: +-[C Box] -N- CCCCUCAG - 5' Stem Sc: 5.68 (6 bp)
| |||| | |
+---[D Box] - GGGGUGCC - 3' Stem Transit Sc: -1.11
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D Bx] Length
>Meth Gm1123 [AUGAUUA] -- 66 bp -- [ 20 / 1 ] 1 [AUGA] 105 bp
>Sc 33.83 [ 7.81 ] -- -1.50 -- [ 31.37 bits ] [5.43]
Seq: >snR41 33.83 (11-115) Cmpl: ySc-18S-Gm1123 Len: 105
Seq: CCCUAUGAUUAAAAAUUAUUAAUCAUAUACCAAUUGUUCCGACUGAAUAGUGGUUUAACU
Seq: ACAUGUCGACAACCCUUUUUCGUUAAGUUUCAGCCUUGUAUGAGG
====================================================================================================
snoRNA: snR41
Target rRNA methyl site: Am541
>> snR41 29.76 (11-115) Cmpl: ySc-18S-Am541 (snR41) 11/1 bp Gs-DpBox: 40 (30) Len: 105 TS
C Box: AUGAUUA Sc: 7.81 (15-21) C-D box dist: 88 bp
D Box: AUGA Sc: 5.43
D'Box: CUGA Sc: 7.34 D'box Guide Transit Sc: -0.67
Meth site found: 541 (snR41) Guide Seq Sc: 9.48 (18.96 -1.12 -7.36 -1.00)
*
Db seq: 5'- AGGAACAAUUGG -3' ySc-18S (538-551)
|||||||||||
Qry seq: 3'- AGUCAGCCUUGUUAACC -5' snR41 (51-40)
C Box-> Guide Seq Gap Sc: -1.76 (18 bp) Guide Seq-> D Box Gap Sc: -2.44 (53 bp)
Strong terminal stem: +-[C Box] -N- CCCCUCAG - 5' Stem Sc: 5.68 (6 bp)
| |||| | |
+---[D Box] - GGGGUGCC - 3' Stem Transit Sc: -1.11
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D'Bx] -- -- [D Bx] Length
>Meth Am 541 [AUGAUUA] -- 18 bp -- [ 11 / 1 ] 1 [CUGA] -- 53 bp -- [AUGA] 105 bp
>Sc 29.76 [ 7.81 ] -- -1.76 -- [ 18.96 bits ] [7.34] -2.44 [5.43]
Seq: >snR41 29.76 (11-115) Cmpl: ySc-18S-Am541 Len: 105
Seq: CCCUAUGAUUAAAAAUUAUUAAUCAUAUACCAAUUGUUCCGACUGAAUAGUGGUUUAACU
Seq: ACAUGUCGACAACCCUUUUUCGUUAAGUUUCAGCCUUGUAUGAGG
====================================================================================================
snoRNA: snR47
Target rRNA methyl site: Am2218
>> snR47 29.02 (11-109) Cmpl: ySc-25S-Am2218 (snR47) 12/0 bp Gs-DpBox: 43 (33) Len: 99 TS
C Box: AUGAUGA Sc: 12.73 (15-21) C-D box dist: 82 bp
D Box: CUGA Sc: 8.05
D'Box: CCGA Sc: 5.24 D'box Guide Transit Sc: -0.67
Meth site found: 2218 (snR47) Guide Seq Sc: 8.63 (18.11 -1.12 -7.36 -1.00)
*
Db seq: 5'- UGAAGAAAUUCA -3' ySc-25S (2215-2228)
:|||||||||||
Qry seq: 3'- AGCCUGCUUCUUUAAGU -5' snR47 (54-43)
C Box-> Guide Seq Gap Sc: -3.16 (21 bp) Guide Seq-> D Box Gap Sc: -1.59 (44 bp)
Terminal stem: +-[C Box] -N- AUAUAAAA - 5' Stem Sc: 0.90 (4 bp)
| |||| |
+---[D Box] - UAAUAUAU - 3' Stem Transit Sc: -1.11
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D'Bx] -- -- [D Bx] Length
>Meth Am2218 [AUGAUGA] -- 21 bp -- [ 12 / 0 ] 1 [CCGA] -- 44 bp -- [CUGA] 99 bp
>Sc 29.02 [ 12.73 ] -- -3.16 -- [ 18.11 bits ] [5.24] -1.59 [8.05]
Seq: >snR47 29.02 (11-109) Cmpl: ySc-25S-Am2218 Len: 99
Seq: AUAUAUGAUGAUAUCCUAUAACAACAACAACAUGAAUUUCUUCGUCCGAAUCCUUUAUAG
Seq: GUGGAAACAAACUUUGACAAUAGCUUUUUAACACUGAUA
====================================================================================================
snoRNA: snR47
Target rRNA methyl site: Am619
>> snR47 27.88 (11-109) Cmpl: ySc-18S-Am619 (snR47) 11/0 bp Gs-D box: 92 (82) Len: 99 TS
C Box: AUGAUGA Sc: 12.73 (15-21) C-D box dist: 82 bp
D Box: CUGA Sc: 8.05
D'Box: None D box Guide Transit Sc: -1.44
Meth site found: 619 (snR47) Guide Seq Sc: 10.24 (19.72 -1.12 -7.36 -1.00)
*
Db seq: 5'- GUUAAAAAGCU -3' ySc-18S (616-629)
|||||||||||
Qry seq: 3'- AGUCACAAUUUUUCGA -5' snR47 (102-92)
C Box-> Guide Seq Gap Sc: -1.50 (70 bp)
Terminal stem: +-[C Box] -N- AUAUAAAA - 5' Stem Sc: 0.90 (4 bp)
| |||| |
+---[D Box] - UAAUAUAU - 3' Stem Transit Sc: -1.11
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D Bx] Length
>Meth Am 619 [AUGAUGA] -- 70 bp -- [ 11 / 0 ] 1 [CUGA] 99 bp
>Sc 27.88 [ 12.73 ] -- -1.50 -- [ 19.72 bits ] [8.05]
Seq: >snR47 27.88 (11-109) Cmpl: ySc-18S-Am619 Len: 99
Seq: AUAUAUGAUGAUAUCCUAUAACAACAACAACAUGAAUUUCUUCGUCCGAAUCCUUUAUAG
Seq: GUGGAAACAAACUUUGACAAUAGCUUUUUAACACUGAUA
====================================================================================================
snoRNA: snR48
Target rRNA methyl site: Gm2790
>> snR48 27.62 (11-122) Cmpl: ySc-25S-Gm2790 (snR48) 15/0 bp Gs-DpBox: 43 (33) Len: 112
C Box: AUGAUGA Sc: 12.73 (15-21) C-D box dist: 95 bp
D Box: CUGA Sc: 8.05
D'Box: AUGU Sc: -0.82 D'box Guide Transit Sc: -0.67
Meth site found: 2790 (snR48) Guide Seq Sc: 14.82 (24.65 -1.47 -7.36 -1.00)
*
Db seq: 5'- AGAGGUGCCAGAAAA -3' ySc-25S (2787-2806)
||||:||||||||||
Qry seq: 3'- UGUAAUCUCUACGGUCUUUU -5' snR48 (57-43)
C Box-> Guide Seq Gap Sc: -3.16 (21 bp) Guide Seq-> D Box Gap Sc: -2.44 (54 bp)
No terminal stem: +-[C Box] -N- UACUAUUU - 5' Stem Sc: -1.90 (1 bp)
| | | |
+---[D Box] - UUUUACUA - 3' Stem Transit Sc: -0.90
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D'Bx] -- -- [D Bx] Length
>Meth Gm2790 [AUGAUGA] -- 21 bp -- [ 15 / 0 ] 1 [AUGU] -- 54 bp -- [CUGA] 112 bp
>Sc 27.62 [ 12.73 ] -- -3.16 -- [ 24.65 bits ] [-0.82] -2.44 [8.05]
Seq: >snR48 27.62 (11-122) Cmpl: ySc-25S-Gm2790 Len: 112
Seq: CAUAAUGAUGAUUUCACUUAUACCUAUAUGUUUUUUCUGGCAUCUCUAAUGUUAGGAUGU
Seq: GAAGUUUAAGUACUCUCCAUUCAAUGAAUACAAUUUUUGACAAUAUCUGAUU
====================================================================================================
snoRNA: snR48
Target rRNA methyl site: Gm2788
>> snR48 20.56 (11-122) Cmpl: ySc-25S-Gm2788 (snR48) 17/1 bp Gs-DpBox: 43 (33) Len: 112
C Box: AUGAUGA Sc: 12.73 (15-21) C-D box dist: 95 bp
D Box: CUGA Sc: 8.05
D'Box: GUUA Sc: -2.52 D'box Guide Transit Sc: -0.67
Meth site found: 2788 (snR48) Guide Seq Sc: 9.46 (21.85 -3.32 -7.36 -1.72)
*
Db seq: 5'- GCUAGAGGUGCCAGAAAA -3' ySc-25S (2784-2805)
: |||||:||||||||||
Qry seq: 3'- AUUGUAAUCUCUACGGUCUUUU -5' snR48 (60-43)
C Box-> Guide Seq Gap Sc: -3.16 (21 bp) Guide Seq-> D Box Gap Sc: -2.44 (52 bp)
No terminal stem: +-[C Box] -N- UACUAUUU - 5' Stem Sc: -1.90 (1 bp)
| | | |
+---[D Box] - UUUUACUA - 3' Stem Transit Sc: -0.90
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D'Bx] -- -- [D Bx] Length
>Meth Gm2788 [AUGAUGA] -- 21 bp -- [ 17 / 1 ] 0 [GUUA] -- 52 bp -- [CUGA] 112 bp
>Sc 20.56 [ 12.73 ] -- -3.16 -- [ 21.85 bits ] [-2.52] -2.44 [8.05]
Seq: >snR48 20.56 (11-122) Cmpl: ySc-25S-Gm2788 Len: 112
Seq: CAUAAUGAUGAUUUCACUUAUACCUAUAUGUUUUUUCUGGCAUCUCUAAUGUUAGGAUGU
Seq: GAAGUUUAAGUACUCUCCAUUCAAUGAAUACAAUUUUUGACAAUAUCUGAUU
====================================================================================================
snoRNA: snR50
Target rRNA methyl site: Gm865
>> snR50 31.25 (11-99) Cmpl: ySc-25S-Gm865 (snR50) 12/0 bp Gs-D box: 81 (71) Len: 89
C Box: AUGAUGA Sc: 12.73 (15-21) C-D box dist: 72 bp
D Box: CUGA Sc: 8.05
D'Box: None D box Guide Transit Sc: -1.44
Meth site found: 865 (snR50) Guide Seq Sc: 14.30 (23.78 -1.12 -7.36 -1.00)
*
Db seq: 5'- GUAGCGGUUCUG -3' ySc-25S (862-876)
||||||||||||
Qry seq: 3'- AGUCACAUCGCCAAGAC -5' snR50 (92-81)
C Box-> Guide Seq Gap Sc: -1.50 (59 bp)
No terminal stem: +-[C Box] -N-GAUUUCAU - 5' Stem Sc: -1.14 (2 bp)
| ||
+---[D Box] - UACUAAUG - 3' Stem Transit Sc: -0.90
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D Bx] Length
>Meth Gm 865 [AUGAUGA] -- 59 bp -- [ 12 / 0 ] 1 [CUGA] 89 bp
>Sc 31.25 [ 12.73 ] -- -1.50 -- [ 23.78 bits ] [8.05]
Seq: >snR50 31.25 (11-99) Cmpl: ySc-25S-Gm865 Len: 89
Seq: UAGAAUGAUGAAAGAGGUAGCAAUUUGCAGCAGAUUUUUCGUGAUUGAAUCAAACAAAGA
Seq: UUAACCUUUACAGAACCGCUACACUGAUA
====================================================================================================
snoRNA: snR51
Target rRNA methyl site: Am100
>> snR51 33.76 (11-117) Cmpl: ySc-18S-Am100 (snR51) 16/1 bp Gs-D box: 94 (84) Len: 107 TS
C Box: AUGAUGA Sc: 12.73 (15-21) C-D box dist: 90 bp
D Box: CUGA Sc: 8.05
D'Box: None D box Guide Transit Sc: -1.44
Meth site found: 100 (snR51) Guide Seq Sc: 14.42 (26.09 -3.32 -7.36 -1.00)
*
Db seq: 5'- CUCAUUAAAUCAGUUAU -3' ySc-18S (97-114)
||||||||||||||||
Qry seq: 3'- AGUCUCAGUAAUUUAGUCAAUA -5' snR51 (110-94)
C Box-> Guide Seq Gap Sc: -1.50 (72 bp)
Terminal stem: +-[C Box] -N-UAUUUGAU - 5' Stem Sc: 2.61 (6 bp)
| ||||||
+---[D Box] - AAAACUAG - 3' Stem Transit Sc: -1.11
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D Bx] Length
>Meth Am 100 [AUGAUGA] -- 72 bp -- [ 16 / 1 ] 1 [CUGA] 107 bp
>Sc 33.76 [ 12.73 ] -- -1.50 -- [ 26.09 bits ] [8.05]
Seq: >snR51 33.76 (11-117) Cmpl: ySc-18S-Am100 Len: 107
Seq: UAUUAUGAUGAUUUUUUUAUAUUCACACUGUACUAGAUUGGUCUCUUUAACGAAGGGGCU
Seq: AAUUGAUGACUACAAAAUAAAAAAUAACUGAUUUAAUGACUCUGAAA
====================================================================================================
snoRNA: snR51
Target rRNA methyl site: Um2726
>> snR51 23.02 (11-117) Cmpl: ySc-25S-Um2726 (snR51) 14/1 bp Gs-DpBox: 26 (16) Len: 107 TS
C Box: AUGAUGA Sc: 12.73 (15-21) C-D box dist: 90 bp
D Box: CUGA Sc: 8.05
D'Box: ACUA Sc: -3.74 D'box Guide Transit Sc: -0.67
Meth site found: 2726 (snR51) Guide Seq Sc: 13.07 (22.90 -1.47 -7.36 -1.00)
*
Db seq: 5'- CAGUGUGAAUACAAA -3' ySc-25S (2723-2735)
||||||||||| |||
Qry seq: 3'- AUCAUGUCACACUUAUAUUU -5' snR51 (40-26)
C Box-> Guide Seq Gap Sc: -4.76 (4 bp) Guide Seq-> D Box Gap Sc: -3.16 (66 bp)
Terminal stem: +-[C Box] -N-UAUUUGAU - 5' Stem Sc: 2.61 (6 bp)
| ||||||
+---[D Box] - AAAACUAG - 3' Stem Transit Sc: -1.11
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D'Bx] -- -- [D Bx] Length
>Meth Um2726 [AUGAUGA] -- 4 bp -- [ 14 / 1 ] 1 [ACUA] -- 66 bp -- [CUGA] 107 bp
>Sc 23.02 [ 12.73 ] -- -4.76 -- [ 22.90 bits ] [-3.74] -3.16 [8.05]
Seq: >snR51 23.02 (11-117) Cmpl: ySc-25S-Um2726 Len: 107
Seq: UAUUAUGAUGAUUUUUUUAUAUUCACACUGUACUAGAUUGGUCUCUUUAACGAAGGGGCU
Seq: AAUUGAUGACUACAAAAUAAAAAAUAACUGAUUUAAUGACUCUGAAA
====================================================================================================
snoRNA: snR52
Target rRNA methyl site: Um2918
>> snR52 32.44 (11-102) Cmpl: ySc-25S-Um2918 (snR52?) 11/1 bp Gs-DpBox: 31 (21) Len: 92
C Box: AUGAUGA Sc: 12.73 (15-21) C-D box dist: 75 bp
D Box: CUGA Sc: 8.05
D'Box: CUGA Sc: 7.34 D'box Guide Transit Sc: -0.67
Meth site found: 2918 (snR52?) Guide Seq Sc: 9.91 (19.39 -1.12 -7.36 -1.00)
*
Db seq: 5'- GAUUGUUCACCC -3' ySc-25S (2915-2927)
|||||||||| |
Qry seq: 3'- AGUCUCUAACAAGUGCG -5' snR52 (42-31)
C Box-> Guide Seq Gap Sc: -1.59 (9 bp) Guide Seq-> D Box Gap Sc: -2.44 (49 bp)
No terminal stem: +-[C Box] -N- CAUCUAGU - 5' Stem Sc: -1.90 (1 bp)
| | ||:
+---[D Box] - AAUUUAUU - 3' Stem Transit Sc: -0.90
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D'Bx] -- -- [D Bx] Length
>Meth Um2918 [AUGAUGA] -- 9 bp -- [ 11 / 1 ] 1 [CUGA] -- 49 bp -- [CUGA] 92 bp
>Sc 32.44 [ 12.73 ] -- -1.59 -- [ 19.39 bits ] [7.34] -2.44 [8.05]
Seq: >snR52 32.44 (11-102) Cmpl: ySc-25S-Um2918 Len: 92
Seq: UACUAUGAUGAAUGACAUUAGCGUGAACAAUCUCUGAUACAAAAUCGAAAGAUUUUAGGA
Seq: UUAGAAAAACUUAUGUUGCCUUCCUUCUGAAA
====================================================================================================
snoRNA: snR52
Target rRNA methyl site: Am420
>> snR52 27.84 (11-102) Cmpl: ySc-18S-Am420 (snR52) 13/0 bp Gs-D box: 84 (74) Len: 92
C Box: AUGAUGA Sc: 12.73 (15-21) C-D box dist: 75 bp
D Box: CUGA Sc: 8.05
D'Box: None D box Guide Transit Sc: -1.44
Meth site found: 420 (snR52) Guide Seq Sc: 10.89 (21.44 -1.47 -7.36 -1.72)
*
Db seq: 5'- AAGGAAGGCAGCA -3' ySc-18S (416-432)
||||||||||:||
Qry seq: 3'- AGUCUUCCUUCCGUUGU -5' snR52 (96-84)
C Box-> Guide Seq Gap Sc: -1.50 (62 bp)
No terminal stem: +-[C Box] -N- CAUCUAGU - 5' Stem Sc: -1.90 (1 bp)
| | ||:
+---[D Box] - AAUUUAUU - 3' Stem Transit Sc: -0.90
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D Bx] Length
>Meth Am 420 [AUGAUGA] -- 62 bp -- [ 13 / 0 ] 0 [CUGA] 92 bp
>Sc 27.84 [ 12.73 ] -- -1.50 -- [ 21.44 bits ] [8.05]
Seq: >snR52 27.84 (11-102) Cmpl: ySc-18S-Am420 Len: 92
Seq: UACUAUGAUGAAUGACAUUAGCGUGAACAAUCUCUGAUACAAAAUCGAAAGAUUUUAGGA
Seq: UUAGAAAAACUUAUGUUGCCUUCCUUCUGAAA
====================================================================================================
snoRNA: snR53
Target rRNA methyl site: Am796
>> snR53 29.86 (11-101) Cmpl: ySc-18S-Am796 (snR53) 11/0 bp Gs-DpBox: 28 (18) Len: 91
C Box: AUGAUGA Sc: 12.73 (15-21) C-D box dist: 74 bp
D Box: CUGA Sc: 8.05
D'Box: AUGA Sc: 3.82 D'box Guide Transit Sc: -0.67
Meth site found: 796 (snR53) Guide Seq Sc: 10.84 (20.32 -1.12 -7.36 -1.00)
*
Db seq: 5'- AUUAGCAUGGA -3' ySc-18S (793-803)
|||||||||||
Qry seq: 3'- AGUACUAAUCGUACCU -5' snR53 (38-28)
C Box-> Guide Seq Gap Sc: -1.59 (6 bp) Guide Seq-> D Box Gap Sc: -2.44 (52 bp)
No terminal stem: +-[C Box] -N- UUUUUUUU - 5' Stem Sc: -1.65 (2 bp)
| || |||
+---[D Box] - AAUCUAAA - 3' Stem Transit Sc: -0.90
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D'Bx] -- -- [D Bx] Length
>Meth Am 796 [AUGAUGA] -- 6 bp -- [ 11 / 0 ] 1 [AUGA] -- 52 bp -- [CUGA] 91 bp
>Sc 29.86 [ 12.73 ] -- -1.59 -- [ 20.32 bits ] [3.82] -2.44 [8.05]
Seq: >snR53 29.86 (11-101) Cmpl: ySc-18S-Am796 Len: 91
Seq: UUUGAUGAUGAUUACACUCCAUGCUAAUCAUGAACGUGUUCGAUGUAAAUUUGAAUACGA
Seq: UGAUUAAAAUUGUUGUUUACGCUUUCUGAAA
====================================================================================================
snoRNA: snR54
Target rRNA methyl site: Am973
>> snR54 37.40 (11-96) Cmpl: ySc-18S-Am973 (snR54) 13/0 bp Gs-DpBox: 39 (29) Len: 86 TS
C Box: AUGAUGA Sc: 12.73 (15-21) C-D box dist: 69 bp
D Box: CUGA Sc: 8.05
D'Box: CUGA Sc: 7.34 D'box Guide Transit Sc: -0.67
Meth site found: 973 (snR54) Guide Seq Sc: 13.84 (23.67 -1.47 -7.36 -1.00)
*
Db seq: 5'- AGAACGAAAGUUA -3' ySc-18S (972-988)
|||||||||||||
Qry seq: 3'- AGUCAUCUUGCUUUCAAU -5' snR54 (51-39)
C Box-> Guide Seq Gap Sc: -1.76 (17 bp) Guide Seq-> D Box Gap Sc: -2.76 (34 bp)
Terminal stem: +-[C Box] -N- AAUCUAGA - 5' Stem Sc: 1.73 (6 bp)
| ||| |||
+---[D Box] - AUUAAAUC - 3' Stem Transit Sc: -1.11
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D'Bx] -- -- [D Bx] Length
>Meth Am 973 [AUGAUGA] -- 17 bp -- [ 13 / 0 ] 1 [CUGA] -- 34 bp -- [CUGA] 86 bp
>Sc 37.40 [ 12.73 ] -- -1.76 -- [ 23.67 bits ] [7.34] -2.76 [8.05]
Seq: >snR54 37.40 (11-96) Cmpl: ySc-18S-Am973 Len: 86
Seq: UAAGAUGAUGAUCAACUUUUUAUAUCAAUAACUUUCGUUCUACUGACUGUGAUCAAACGA
Seq: UCUUGUAGAGAACUUUUACUCUGAAU
====================================================================================================
snoRNA: snR55
Target rRNA methyl site: Um1265
>> snR55 22.90 (11-108) Cmpl: ySc-18S-Um1265 (snR55) 12/0 bp Gs-D box: 90 (80) Len: 98
C Box: UUGAUGA Sc: 8.73 (15-21) C-D box dist: 81 bp
D Box: CUGA Sc: 8.05
D'Box: None D box Guide Transit Sc: -1.44
Meth site found: 1265 (snR55) Guide Seq Sc: 9.95 (19.43 -1.12 -7.36 -1.00)
*
Db seq: 5'- UGGUGGUGCAUG -3' ySc-18S (1264-1278)
|||||:||||||
Qry seq: 3'- AGUCUACCACUACGUAC -5' snR55 (101-90)
C Box-> Guide Seq Gap Sc: -1.50 (68 bp)
No terminal stem: +-[C Box] -N- AUUUUUCA - 5' Stem Sc: -1.90 (1 bp)
| | ||
+---[D Box] - UUUUAACC - 3' Stem Transit Sc: -0.90
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D Bx] Length
>Meth Um1265 [UUGAUGA] -- 68 bp -- [ 12 / 0 ] 1 [CUGA] 98 bp
>Sc 22.90 [ 8.73 ] -- -1.50 -- [ 19.43 bits ] [8.05]
Seq: >snR55 22.90 (11-108) Cmpl: ySc-18S-Um1265 Len: 98
Seq: UUAUUUGAUGAAUAGACACCACAAUCGUCUUUUUUUUAUCCGGCGAUGAUUCCUUUGGAA
Seq: UAUGUGCCAUGGAUUACAUCAUGCAUCACCAUCUGAUU
====================================================================================================
snoRNA: snR56
Target rRNA methyl site: Gm1425
>> snR56 34.94 (11-97) Cmpl: ySc-18S-Gm1425 (snR56) 11/0 bp Gs-DpBox: 35 (25) Len: 87
C Box: AUGAUGA Sc: 12.73 (15-21) C-D box dist: 70 bp
D Box: CUGA Sc: 8.05
D'Box: CUGA Sc: 7.34 D'box Guide Transit Sc: -0.67
Meth site found: 1425 (snR56) Guide Seq Sc: 12.13 (21.61 -1.12 -7.36 -1.00)
*
Db seq: 5'- ACAGGUCUGUG -3' ySc-18S (1424-1438)
|||||||||||
Qry seq: 3'- AGUCAUGUCCAGACAC -5' snR56 (45-35)
C Box-> Guide Seq Gap Sc: -2.16 (13 bp) Guide Seq-> D Box Gap Sc: -1.59 (41 bp)
Possible terminal stem: +-[C Box] -N- AAUUUAAC - 5' Stem Sc: -0.34 (5 bp)
| || || |
+---[D Box] - CUUUAACU - 3' Stem Transit Sc: -0.90
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D'Bx] -- -- [D Bx] Length
>Meth Gm1425 [AUGAUGA] -- 13 bp -- [ 11 / 0 ] 1 [CUGA] -- 41 bp -- [CUGA] 87 bp
>Sc 34.94 [ 12.73 ] -- -2.16 -- [ 21.61 bits ] [7.34] -1.59 [8.05]
Seq: >snR56 34.94 (11-97) Cmpl: ySc-18S-Gm1425 Len: 87
Seq: UAACAUGAUGAAAAAAUAUAUUAACACAGACCUGUACUGAACUUUUCGAAGUUUUGCAGA
Seq: UAACAAUAUUGCUUUUUUUCUCUGACU
====================================================================================================
snoRNA: snR57
Target rRNA methyl site: Gm1570
>> snR57 21.93 (11-98) Cmpl: ySc-18S-Gm1570 (snR57) 15/0 bp Gs-D box: 77 (67) Len: 88 TS
C Box: GUGAUUA Sc: 5.84 (15-21) C-D box dist: 71 bp
D Box: AUGA Sc: 5.43
D'Box: None D box Guide Transit Sc: -1.44
Meth site found: 1570 (snR57) Guide Seq Sc: 14.17 (24.00 -1.47 -7.36 -1.00)
*
Db seq: 5'- AACGAGGAAUUCCUA -3' ySc-18S (1568-1589)
|||||:|||||||||
Qry seq: 3'- AGUAUUUGCUUCUUAAGGAU -5' snR57 (91-77)
C Box-> Guide Seq Gap Sc: -2.09 (55 bp)
Terminal stem: +-[C Box] -N- GAAUUGGA - 5' Stem Sc: 1.13 (7 bp)
| : |::|||
+---[D Box] - UCUGGCCU - 3' Stem Transit Sc: -1.11
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D Bx] Length
>Meth Gm1570 [GUGAUUA] -- 55 bp -- [ 15 / 0 ] 1 [AUGA] 88 bp
>Sc 21.93 [ 5.84 ] -- -2.09 -- [ 24.00 bits ] [5.43]
Seq: >snR57 21.93 (11-98) Cmpl: ySc-18S-Gm1570 Len: 88
Seq: AAGCGUGAUUAUAAAAAAUGAUUUAAAUAUUUUUCUGAGGAAGUAUAUGCAGGACAUAUU
Seq: GUGAAUUAGGAAUUCUUCGUUUAUGAUC
====================================================================================================
snoRNA: snR58
Target rRNA methyl site: Cm661
>> snR58 37.69 (11-106) Cmpl: ySc-25S-Cm661 (snR58) 13/0 bp Gs-DpBox: 39 (29) Len: 96
C Box: AUGAUGA Sc: 12.73 (15-21) C-D box dist: 79 bp
D Box: CUGA Sc: 8.05
D'Box: CUGA Sc: 7.34 D'box Guide Transit Sc: -0.67
Meth site found: 661 (snR58) Guide Seq Sc: 14.48 (24.31 -1.47 -7.36 -1.00)
*
Db seq: 5'- AGUCUAACGUCUA -3' ySc-25S (658-674)
|||||||||||||
Qry seq: 3'- AGUCUUCAGAUUGCAGAU -5' snR58 (51-39)
C Box-> Guide Seq Gap Sc: -1.76 (17 bp) Guide Seq-> D Box Gap Sc: -1.59 (44 bp)
No terminal stem: +-[C Box] -N- UUCAUACC - 5' Stem Sc: -0.43 (2 bp)
| ||
+---[D Box] - GUAGGUAU - 3' Stem Transit Sc: -0.90
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D'Bx] -- -- [D Bx] Length
>Meth Cm 661 [AUGAUGA] -- 17 bp -- [ 13 / 0 ] 1 [CUGA] -- 44 bp -- [CUGA] 96 bp
>Sc 37.69 [ 12.73 ] -- -1.76 -- [ 24.31 bits ] [7.34] -1.59 [8.05]
Seq: >snR58 37.69 (11-106) Cmpl: ySc-25S-Cm661 Len: 96
Seq: CUUUAUGAUGAUAUUCUUUACGAACUUUUAGACGUUAGACUUCUGAAGGAGAUUAGACCC
Seq: UCCUAUGGAAGAGAAACUCGUUAAACUUAUCUGAGU
====================================================================================================
snoRNA: snR59
Target rRNA methyl site: Am805
>> snR59 33.01 (11-88) Cmpl: ySc-25S-Am805 (snR39/snR59) 14/0 bp Gs-D box: 69 (59) Len: 78
C Box: AUGAUGA Sc: 12.73 (15-21) C-D box dist: 61 bp
D Box: CUGA Sc: 8.05
D'Box: None D box Guide Transit Sc: -1.44
Meth site found: 805 (snR39/snR59) Guide Seq Sc: 16.65 (27.20 -1.47 -7.36 -1.72)
*
Db seq: 5'- CCGAAAGAUGGUGA -3' ySc-25S (801-816)
||||||||||||||
Qry seq: 3'- AGUCGGCUUUCUACCACU -5' snR59 (82-69)
C Box-> Guide Seq Gap Sc: -2.09 (47 bp)
Possible terminal stem: +-[C Box] -N- UUCUUUCU - 5' Stem Sc: -0.22 (4 bp)
| || ||
+---[D Box] - CUAGUAAA - 3' Stem Transit Sc: -0.90
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D Bx] Length
>Meth Am 805 [AUGAUGA] -- 47 bp -- [ 14 / 0 ] 0 [CUGA] 78 bp
>Sc 33.01 [ 12.73 ] -- -2.09 -- [ 27.20 bits ] [8.05]
Seq: >snR59 33.01 (11-88) Cmpl: ySc-25S-Am805 Len: 78
Seq: CUUAAUGAUGAAAACUAUUCCUUAUUCUCGACUAGUCUUUGACAAUGCUGUCGUUUAAUC
Seq: ACCAUCUUUCGGCUGACU
====================================================================================================
snoRNA: snR60
Target rRNA methyl site: Gm906
>> snR60 35.49 (11-113) Cmpl: ySc-25S-Gm906 (snR60) 19/0 bp Gs-D box: 89 (79) Len: 103
C Box: AUGAUGA Sc: 12.73 (15-21) C-D box dist: 86 bp
D Box: CUGA Sc: 8.05
D'Box: None D box Guide Transit Sc: -1.44
Meth site found: 906 (snR60) Guide Seq Sc: 18.54 (31.67 -4.05 -7.36 -1.72)
*
Db seq: 5'- AUAGGGGCGAAAGACUAAU -3' ySc-25S (902-922)
|||||:|||||||||||||
Qry seq: 3'- AGUCUAUCCUCGCUUUCUGAUUA -5' snR60 (107-89)
C Box-> Guide Seq Gap Sc: -1.50 (67 bp)
Possible terminal stem: +-[C Box] -N-UUGUUUAA - 5' Stem Sc: -0.19 (3 bp)
| |||
+---[D Box] - ACAUUACA - 3' Stem Transit Sc: -0.90
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D Bx] Length
>Meth Gm 906 [AUGAUGA] -- 67 bp -- [ 19 / 0 ] 0 [CUGA] 103 bp
>Sc 35.49 [ 12.73 ] -- -1.50 -- [ 31.67 bits ] [8.05]
Seq: >snR60 35.49 (11-113) Cmpl: ySc-25S-Gm906 Len: 103
Seq: GUUAAUGAUGAUAACCAAAGAUGCAUAGUUCAACUGAUUGAACAUACUAUCGAAAUGAAG
Seq: AUAAAAAUUUCCAUCGAAAUUAGUCUUUCGCUCCUAUCUGAAC
====================================================================================================
snoRNA: snR60
Target rRNA methyl site: Am815
>> snR60 31.52 (11-113) Cmpl: ySc-25S-Am815 (snR60) 10/0 bp Gs-DpBox: 33 (23) Len: 103
C Box: AUGAUGA Sc: 12.73 (15-21) C-D box dist: 86 bp
D Box: CUGA Sc: 8.05
D'Box: CUGA Sc: 7.34 D'box Guide Transit Sc: -0.67
Meth site found: 815 (snR60) Guide Seq Sc: 9.29 (18.77 -1.12 -7.36 -1.00)
*
Db seq: 5'- UGAACUAUGC -3' ySc-25S (812-824)
||||||||||
Qry seq: 3'- AGUCAACUUGAUACG -5' snR60 (42-33)
C Box-> Guide Seq Gap Sc: -2.16 (11 bp) Guide Seq-> D Box Gap Sc: -2.16 (60 bp)
Possible terminal stem: +-[C Box] -N-UUGUUUAA - 5' Stem Sc: -0.19 (3 bp)
| |||
+---[D Box] - ACAUUACA - 3' Stem Transit Sc: -0.90
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D'Bx] -- -- [D Bx] Length
>Meth Am 815 [AUGAUGA] -- 11 bp -- [ 10 / 0 ] 1 [CUGA] -- 60 bp -- [CUGA] 103 bp
>Sc 31.52 [ 12.73 ] -- -2.16 -- [ 18.77 bits ] [7.34] -2.16 [8.05]
Seq: >snR60 31.52 (11-113) Cmpl: ySc-25S-Am815 Len: 103
Seq: GUUAAUGAUGAUAACCAAAGAUGCAUAGUUCAACUGAUUGAACAUACUAUCGAAAUGAAG
Seq: AUAAAAAUUUCCAUCGAAAUUAGUCUUUCGCUCCUAUCUGAAC
====================================================================================================
snoRNA: snR61
Target rRNA methyl site: Am1131
>> snR61 33.76 (11-99) Cmpl: ySc-25S-Am1131 (snR61) 11/0 bp Gs-DpBox: 36 (26) Len: 89
C Box: AUGAUGA Sc: 12.73 (15-21) C-D box dist: 72 bp
D Box: CUGA Sc: 8.05
D'Box: CUGA Sc: 7.34 D'box Guide Transit Sc: -0.67
Meth site found: 1131 (snR61) Guide Seq Sc: 10.96 (21.15 -1.12 -7.36 -1.72)
*
Db seq: 5'- AAGCAGAACUG -3' ySc-25S (1127-1141)
|||||||||||
Qry seq: 3'- AGUCUUCGUCUUGAC -5' snR61 (46-36)
C Box-> Guide Seq Gap Sc: -2.16 (14 bp) Guide Seq-> D Box Gap Sc: -1.59 (43 bp)
No terminal stem: +-[C Box] -N- CAUCUGUU - 5' Stem Sc: -1.23 (2 bp)
| | | :
+---[D Box] - UUUUGUUC - 3' Stem Transit Sc: -0.90
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D'Bx] -- -- [D Bx] Length
>Meth Am1131 [AUGAUGA] -- 14 bp -- [ 11 / 0 ] 0 [CUGA] -- 43 bp -- [CUGA] 89 bp
>Sc 33.76 [ 12.73 ] -- -2.16 -- [ 21.15 bits ] [7.34] -1.59 [8.05]
Seq: >snR61 33.76 (11-99) Cmpl: ySc-25S-Am1131 Len: 89
Seq: UACAAUGAUGAUAAAAUUUACUAUUCAGUUCUGCUUCUGAACCAAAAUAAUAGGAAGAUA
Seq: ACCAAUUUUACCAAAGCUCAAAUCUGAUU
====================================================================================================
snoRNA: snR62
Target rRNA methyl site: Um1886
>> snR62 35.89 (11-110) Cmpl: ySc-25S-Um1886 (snR62) 14/0 bp Gs-DpBox: 37 (27) Len: 100
C Box: AUGAUGA Sc: 12.73 (15-21) C-D box dist: 83 bp
D Box: CUGA Sc: 8.05
D'Box: CUGA Sc: 7.34 D'box Guide Transit Sc: -0.67
Meth site found: 1886 (snR62) Guide Seq Sc: 13.94 (24.48 -1.47 -7.36 -1.72)
*
Db seq: 5'- AUAAUGUAGAUAAG -3' ySc-25S (1882-1898)
||||||||||||||
Qry seq: 3'- AGUCUAUUACAUCUAUUC -5' snR62 (50-37)
C Box-> Guide Seq Gap Sc: -2.16 (15 bp) Guide Seq-> D Box Gap Sc: -2.44 (50 bp)
Possible terminal stem: +-[C Box] -N- UUUUUCUU - 5' Stem Sc: -0.89 (3 bp)
| |||
+---[D Box] - AAAUUUUU - 3' Stem Transit Sc: -0.90
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D'Bx] -- -- [D Bx] Length
>Meth Um1886 [AUGAUGA] -- 15 bp -- [ 14 / 0 ] 0 [CUGA] -- 50 bp -- [CUGA] 100 bp
>Sc 35.89 [ 12.73 ] -- -2.16 -- [ 24.48 bits ] [7.34] -2.44 [8.05]
Seq: >snR62 35.89 (11-110) Cmpl: ySc-25S-Um1886 Len: 100
Seq: UUUUAUGAUGAAUUUAUGUUUUCAAUCUUAUCUACAUUAUCUGAAUUAAUAGCUAACAAU
Seq: AGUUAUAAUGGAAGAUAUACGACUAUCAACAAUUCUGAAA
====================================================================================================
snoRNA: snR63
Target rRNA methyl site: Am2254
>> snR63 23.55 (11-265) Cmpl: ySc-25S-Am2254 (snR63) 12/0 bp Gs-D box: 247 (237) Len: 255
C Box: AUGAUGA Sc: 12.73 (15-21) C-D box dist: 238 bp
D Box: CUGA Sc: 8.05
D'Box: None D box Guide Transit Sc: -1.44
Meth site found: 2254 (snR63) Guide Seq Sc: 12.50 (21.98 -1.12 -7.36 -1.00)
*
Db seq: 5'- GUAACUAUGACU -3' ySc-25S (2251-2265)
||||||||||||
Qry seq: 3'- AGUCACAUUGAUACUGA -5' snR63 (258-247)
C Box-> Guide Seq Gap Sc: -7.40 (225 bp)
Possible terminal stem: +-[C Box] -N-UUUUCAGG - 5' Stem Sc: -2.19 (3 bp)
| |||
+---[D Box] - UUUAUCCA - 3' Stem Transit Sc: -0.90
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D Bx] Length
>Meth Am2254 [AUGAUGA] -- 225 bp -- [ 12 / 0 ] 1 [CUGA] 255 bp
>Sc 23.55 [ 12.73 ] -- -7.40 -- [ 21.98 bits ] [8.05]
Seq: >snR63 23.55 (11-265) Cmpl: ySc-25S-Am2254 Len: 255
Seq: UUUAAUGAUGAAGAUUUUAAUUUUCCGUUGGUCUAUUAAGAACAGAAGUACUUCAAAACU
Seq: ACUUUUUAAGACCAUCCUUUUACAGUAUUUUUUCAAUAUUGUAAAACUUCUCAUUUACUU
Seq: UGUGUCUUUAUGAUCUCAUCGUUCUGGUGGACCAUAAUCAGACGCACGGUAUACUUCGUU
Seq: UCUGUUGGAGAAUAUUGGGAGUCUUUUAAUGUGAUGAGUGGCCAACAUAACCUUAUAGUC
Seq: AUAGUUACACUGAUU
====================================================================================================
snoRNA: snR64
Target rRNA methyl site: Cm2335
>> snR64 34.95 (11-111) Cmpl: ySc-25S-Cm2335 (snR64) 11/0 bp Gs-DpBox: 28 (18) Len: 101 TS
C Box: AUGAUGA Sc: 12.73 (15-21) C-D box dist: 84 bp
D Box: CUGA Sc: 8.05
D'Box: CAGA Sc: 3.94 D'box Guide Transit Sc: -0.67
Meth site found: 2335 (snR64) Guide Seq Sc: 11.57 (21.05 -1.12 -7.36 -1.00)
*
Db seq: 5'- UGUCCCUAUCU -3' ySc-25S (2332-2342)
|||||||||||
Qry seq: 3'- AGACAACAGGGAUAGA -5' snR64 (38-28)
C Box-> Guide Seq Gap Sc: -1.59 (6 bp) Guide Seq-> D Box Gap Sc: -2.16 (62 bp)
Terminal stem: +-[C Box] -N- GUUAGGUG - 5' Stem Sc: 4.18 (7 bp)
| | ||||||
+---[D Box] - CUAUCCAC - 3' Stem Transit Sc: -1.11
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D'Bx] -- -- [D Bx] Length
>Meth Cm2335 [AUGAUGA] -- 6 bp -- [ 11 / 0 ] 1 [CAGA] -- 62 bp -- [CUGA] 101 bp
>Sc 34.95 [ 12.73 ] -- -1.59 -- [ 21.05 bits ] [3.94] -2.16 [8.05]
Seq: >snR64 34.95 (11-111) Cmpl: ySc-25S-Cm2335 Len: 101
Seq: UUGUAUGAUGAGGAACCAGAUAGGGACAACAGAUUCUCAAGUGACGAGGAACAUCUUUUA
Seq: AAGCCCAGUUUUUAGUAGAGCUUAGGGCGCCUUUACUGACU
====================================================================================================
snoRNA: snR65
Target rRNA methyl site: Um2345
>> snR65 33.91 (11-110) Cmpl: ySc-25S-Um2345 (snR65) 11/0 bp Gs-DpBox: 42 (32) Len: 100 TS
C Box: AUGAUGA Sc: 12.73 (15-21) C-D box dist: 83 bp
D Box: CUGA Sc: 8.05
D'Box: CUGA Sc: 7.34 D'box Guide Transit Sc: -0.67
Meth site found: 2345 (snR65) Guide Seq Sc: 10.95 (20.43 -1.12 -7.36 -1.00)
*
Db seq: 5'- UACUAUCUAGC -3' ySc-25S (2342-2357)
|||||||||||
Qry seq: 3'- AGUCUAUGAUAGAUCG -5' snR65 (52-42)
C Box-> Guide Seq Gap Sc: -1.76 (20 bp) Guide Seq-> D Box Gap Sc: -2.44 (47 bp)
Terminal stem: +-[C Box] -N- AAUCUUAA - 5' Stem Sc: 0.81 (4 bp)
| || ||
+---[D Box] - ACCGAUUU - 3' Stem Transit Sc: -1.11
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D'Bx] -- -- [D Bx] Length
>Meth Um2345 [AUGAUGA] -- 20 bp -- [ 11 / 0 ] 1 [CUGA] -- 47 bp -- [CUGA] 100 bp
>Sc 33.91 [ 12.73 ] -- -1.76 -- [ 20.43 bits ] [7.34] -2.44 [8.05]
Seq: >snR65 33.91 (11-110) Cmpl: ySc-25S-Um2345 Len: 100
Seq: UAAAAUGAUGAUUUUUUUAAACACAAUUUAUGCUAGAUAGUAUCUGAAAGCAUUCAAACU
Seq: UUAUGAUUACAGUGUUUUCGACAGUUUUAAAUCUCUGAAC
====================================================================================================
snoRNA: snR66
Target rRNA methyl site: Um2415
>> snR66 36.63 (11-95) Cmpl: ySc-25S-Um2415 (snR66) 12/0 bp Gs-DpBox: 36 (26) Len: 85 TS
C Box: AUGAUGA Sc: 12.73 (15-21) C-D box dist: 68 bp
D Box: CUGA Sc: 8.05
D'Box: CUGA Sc: 7.34 D'box Guide Transit Sc: -0.67
Meth site found: 2415 (snR66) Guide Seq Sc: 12.44 (23.27 -1.12 -7.36 -2.35)
*
Db seq: 5'- GAGCUUGACUCU -3' ySc-25S (2410-2424)
||||||||||||
Qry seq: 3'- AGUCUCGAACUGAGA -5' snR66 (47-36)
C Box-> Guide Seq Gap Sc: -2.16 (14 bp) Guide Seq-> D Box Gap Sc: -1.59 (39 bp)
Terminal stem: +-[C Box] -N- ACUACUUA - 5' Stem Sc: 1.60 (4 bp)
| |||| |
+---[D Box] - CCAUGAUU - 3' Stem Transit Sc: -1.11
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D'Bx] -- -- [D Bx] Length
>Meth Um2415 [AUGAUGA] -- 14 bp -- [ 12 / 0 ] -1 [CUGA] -- 39 bp -- [CUGA] 85 bp
>Sc 36.63 [ 12.73 ] -- -2.16 -- [ 23.27 bits ] [7.34] -1.59 [8.05]
Seq: >snR66 36.63 (11-95) Cmpl: ySc-25S-Um2415 Len: 85
Seq: UCAAAUGAUGAAAUACCAAUGCAACAGAGUCAAGCUCUGAGUUUCAAAAAGAAACAUGGA
Seq: CGAGAUUGCUUUUUUAUUACUGACC
====================================================================================================
snoRNA: snR67
Target rRNA methyl site: Um2721
>> snR67 26.39 (11-92) Cmpl: ySc-25S-Um2721 (snR67) 11/0 bp Gs-D box: 75 (65) Len: 82
C Box: AUGAUGA Sc: 12.73 (15-21) C-D box dist: 65 bp
D Box: CUGA Sc: 8.05
D'Box: None D box Guide Transit Sc: -1.44
Meth site found: 2721 (snR67) Guide Seq Sc: 10.03 (19.51 -1.12 -7.36 -1.00)
*
Db seq: 5'- AUUUUCAGUGU -3' ySc-25S (2718-2730)
|||||||||||
Qry seq: 3'- AGUCUUAAAAGUCACA -5' snR67 (85-75)
C Box-> Guide Seq Gap Sc: -2.09 (53 bp)
No terminal stem: +-[C Box] -N- AAUUACUC - 5' Stem Sc: -1.90 (1 bp)
| | | :
+---[D Box] - AAUUAAUG - 3' Stem Transit Sc: -0.90
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D Bx] Length
>Meth Um2721 [AUGAUGA] -- 53 bp -- [ 11 / 0 ] 1 [CUGA] 82 bp
>Sc 26.39 [ 12.73 ] -- -2.09 -- [ 19.51 bits ] [8.05]
Seq: >snR67 26.39 (11-92) Cmpl: ySc-25S-Um2721 Len: 82
Seq: UAACAUGAUGACUAAGUUGUCGCCCCAAGCGGAUCUUUGAAAUGACUGAUUUUACAAACA
Seq: ACAAACACUGAAAAUUCUGAAA
====================================================================================================
snoRNA: snR67
Target rRNA methyl site: Gm2616
>> snR67 23.72 (11-92) Cmpl: ySc-25S-Gm2616 (snR67) 11/2 bp Gs-DpBox: 28 (18) Len: 82
C Box: AUGAUGA Sc: 12.73 (15-21) C-D box dist: 65 bp
D Box: CUGA Sc: 8.05
D'Box: CGGA Sc: 3.65 D'box Guide Transit Sc: -0.67
Meth site found: 2616 (snR67) Guide Seq Sc: 4.02 (15.21 -1.47 -7.36 -2.35)
*
Db seq: 5'- GGCUGGGGCGGCA -3' ySc-25S (2611-2623)
| |||||||:||
Qry seq: 3'- AGGCGAACCCCGCUGU -5' snR67 (40-28)
C Box-> Guide Seq Gap Sc: -1.59 (6 bp) Guide Seq-> D Box Gap Sc: -1.59 (43 bp)
No terminal stem: +-[C Box] -N- AAUUACUC - 5' Stem Sc: -1.90 (1 bp)
| | | :
+---[D Box] - AAUUAAUG - 3' Stem Transit Sc: -0.90
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D'Bx] -- -- [D Bx] Length
>Meth Gm2616 [AUGAUGA] -- 6 bp -- [ 11 / 2 ] -1 [CGGA] -- 43 bp -- [CUGA] 82 bp
>Sc 23.72 [ 12.73 ] -- -1.59 -- [ 15.21 bits ] [3.65] -1.59 [8.05]
Seq: >snR67 23.72 (11-92) Cmpl: ySc-25S-Gm2616 Len: 82
Seq: UAACAUGAUGACUAAGUUGUCGCCCCAAGCGGAUCUUUGAAAUGACUGAUUUUACAAACA
Seq: ACAAACACUGAAAAUUCUGAAA
====================================================================================================
snoRNA: snR68
Target rRNA methyl site: Am2637
>> snR68 31.86 (11-146) Cmpl: ySc-25S-Am2637 (snR68) 12/0 bp Gs-DpBox: 34 (24) Len: 136 TS
C Box: AUGAUGA Sc: 12.73 (15-21) C-D box dist: 119 bp
D Box: CUGA Sc: 8.05
D'Box: UUGA Sc: 3.82 D'box Guide Transit Sc: -0.67
Meth site found: 2637 (snR68) Guide Seq Sc: 14.00 (23.48 -1.12 -7.36 -1.00)
*
Db seq: 5'- ACGAUAACGCAG -3' ySc-25S (2634-2648)
||||||||||||
Qry seq: 3'- AGUUAUGCUAUUGCGUC -5' snR68 (45-34)
C Box-> Guide Seq Gap Sc: -2.16 (12 bp) Guide Seq-> D Box Gap Sc: -3.16 (90 bp)
Terminal stem: +-[C Box] -N-UAUUUAGG - 5' Stem Sc: 0.35 (6 bp)
| |::|:|
+---[D Box] - AAGGUUCA - 3' Stem Transit Sc: -1.11
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D'Bx] -- -- [D Bx] Length
>Meth Am2637 [AUGAUGA] -- 12 bp -- [ 12 / 0 ] 1 [UUGA] -- 90 bp -- [CUGA] 136 bp
>Sc 31.86 [ 12.73 ] -- -2.16 -- [ 23.48 bits ] [3.82] -3.16 [8.05]
Seq: >snR68 31.86 (11-146) Cmpl: ySc-25S-Am2637 Len: 136
Seq: UAUCAUGAUGAGCAUUUAUUUUACUGCGUUAUCGUAUUGACGGGGGCUGUUUAAGUACAG
Seq: UCUGUUUUAUAAUCUAUAUUCAUUUAUAUUUUAUAUUUCUUACCGAGGAAAUUGACUCUU
Seq: AACAGAUUUGCUGAAA
====================================================================================================
snoRNA: snR69
Target rRNA methyl site: Cm2945
>> snR69 29.17 (11-111) Cmpl: ySc-25S-Cm2945 (snR69) 18/3 bp Gs-DpBox: 38 (28) Len: 101
C Box: AUGAUGA Sc: 12.73 (15-21) C-D box dist: 84 bp
D Box: CUGA Sc: 8.05
D'Box: UCGA Sc: 1.72 D'box Guide Transit Sc: -0.67
Meth site found: 2945 (snR69) Guide Seq Sc: 11.58 (23.99 -4.05 -7.36 -1.00)
*
Db seq: 5'- GAGCUGGGUUUAGACCGUCGU -3' ySc-25S (2942-2959)
|||||||||||| | |:| ||
Qry seq: 3'- AGCUUCUCGACCCAAAUAUCGUAACA -5' snR69 (58-38)
C Box-> Guide Seq Gap Sc: -1.76 (16 bp) Guide Seq-> D Box Gap Sc: -1.59 (42 bp)
Possible terminal stem: +-[C Box] -N-UUGUUUAU - 5' Stem Sc: -1.87 (4 bp)
| ::|| :
+---[D Box] - GUAAUAGA - 3' Stem Transit Sc: -0.90
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D'Bx] -- -- [D Bx] Length
>Meth Cm2945 [AUGAUGA] -- 16 bp -- [ 18 / 3 ] 1 [UCGA] -- 42 bp -- [CUGA] 101 bp
>Sc 29.17 [ 12.73 ] -- -1.76 -- [ 23.99 bits ] [1.72] -1.59 [8.05]
Seq: >snR69 29.17 (11-111) Cmpl: ySc-25S-Cm2945 Len: 101
Seq: GUUUAUGAUGAGACCACGUCCUUAGUGACAAUGCUAUAAACCCAGCUCUUCGAUUCGUUU
Seq: UUAAUGAAAGGGAGAAGAUUUUUUUGUCAAACGCUCUGAGU
====================================================================================================
snoRNA: snR70
Target rRNA methyl site: Cm1637
>> snR70 18.72 (12-175) Cmpl: ySc-25S-Cm1637 (snR70) 10/1 bp Gs-DpBox: 31 (20) Len: 164
C Box: AUGAUGA Sc: 12.73 (16-22) C-D box dist: 147 bp
D Box: CUGA Sc: 8.05
D'Box: CAUA Sc: -1.52 D'box Guide Transit Sc: -0.67
Meth site found: 1637 (snR70) Guide Seq Sc: 10.69 (20.17 -1.12 -7.36 -1.00)
*
Db seq: 5'- CCGCCCUGUCG -3' ySc-25S-Cm1637-iU8 (3-15)
|||||| ||||
Qry seq: 3'- AUACAGGCGGGCCAGC -5' snR70 (41-31)
C Box-> Guide Seq Gap Sc: -1.59 (8 bp) Guide Seq-> D Box Gap Sc: -8.08 (123 bp)
No terminal stem: +-[C Box] -N- AGUUUUCC - 5' Stem Sc: -1.90 (1 bp)
| |: |
+---[D Box] - UUUUUUCG - 3' Stem Transit Sc: -0.90
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D'Bx] -- -- [D Bx] Length
>Meth Cm1637 [AUGAUGA] -- 8 bp -- [ 10 / 1 ] 1 [CAUA] -- 123 bp -- [CUGA] 164 bp
>Sc 18.72 [ 12.73 ] -- -1.59 -- [ 20.17 bits ] [-1.52] -8.08 [8.05]
====================================================================================================
snoRNA: snR71
Target rRNA methyl site: Am2943
>> snR71 21.67 (11-99) Cmpl: ySc-25S-Am2943 (snR71) 9/1 bp Gs-DpBox: 29 (19) Len: 89
C Box: AUGAUGA Sc: 12.73 (15-21) C-D box dist: 72 bp
D Box: CUGA Sc: 8.05
D'Box: CAGA Sc: 3.94 D'box Guide Transit Sc: -0.67
Meth site found: 2943 (snR71) Guide Seq Sc: 2.54 (12.01 -1.12 -7.36 -1.00)
*
Db seq: 5'- AUGAGCUGGG -3' ySc-25S-Am2943 (3-13)
|||||||:|
Qry seq: 3'- AGACUCACUCGACUC -5' snR71 (38-29)
C Box-> Guide Seq Gap Sc: -1.59 (7 bp) Guide Seq-> D Box Gap Sc: -2.44 (50 bp)
No terminal stem: +-[C Box] -N- AUUGUUUA - 5' Stem Sc: -1.65 (2 bp)
| || ||
+---[D Box] - CCAAACAA - 3' Stem Transit Sc: -0.90
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D'Bx] -- -- [D Bx] Length
>Meth Am2943 [AUGAUGA] -- 7 bp -- [ 9 / 1 ] 1 [CAGA] -- 50 bp -- [CUGA] 89 bp
>Sc 21.67 [ 12.73 ] -- -1.59 -- [ 12.01 bits ] [3.94] -2.44 [8.05]
====================================================================================================
snoRNA: snR72
Target rRNA methyl site: Am874
>> snR72 35.56 (11-101) Cmpl: ySc-25S-Am874 (snR72/Z2) 14/0 bp Gs-D box: 81 (71) Len: 91 TS
C Box: GUGAUGA Sc: 10.76 (15-21) C-D box dist: 74 bp
D Box: CUGA Sc: 8.05
D'Box: None D box Guide Transit Sc: -1.44
Meth site found: 874 (snR72/Z2) Guide Seq Sc: 17.48 (27.31 -1.47 -7.36 -1.00)
*
Db seq: 5'- CUGACGUGCAAAUC -3' ySc-25S (871-889)
||||||||||||||
Qry seq: 3'- AGUCUGACUGCACGUUUAG -5' snR72 (94-81)
C Box-> Guide Seq Gap Sc: -1.50 (59 bp)
Terminal stem: +-[C Box] -N- AGUGUUAA - 5' Stem Sc: 3.31 (6 bp)
| ||||||
+---[D Box] - UCACAAGC - 3' Stem Transit Sc: -1.11
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D Bx] Length
>Meth Am 874 [GUGAUGA] -- 59 bp -- [ 14 / 0 ] 1 [CUGA] 91 bp
>Sc 35.56 [ 10.76 ] -- -1.50 -- [ 27.31 bits ] [8.05]
Seq: >snR72 35.56 (11-101) Cmpl: ySc-25S-Am874 Len: 91
Seq: UGAUGUGAUGACAACUUCUUGAGCUAUAUAUUUUCUUGAGAACAUCAAUGAAGAAAACGU
Seq: CUCAUCAAAUGAUUUGCACGUCAGUCUGAUC
====================================================================================================
snoRNA: snR73
Target rRNA methyl site: Cm2956
>> snR73 29.52 (11-113) Cmpl: ySc-25S-Cm2956 (snR73/Z3) 12/1 bp Gs-DpBox: 32 (22) Len: 103
C Box: AUGAUGA Sc: 12.73 (15-21) C-D box dist: 86 bp
D Box: CUGA Sc: 8.05
D'Box: CUGC Sc: 3.40 D'box Guide Transit Sc: -0.67
Meth site found: 2956 (snR73/Z3) Guide Seq Sc: 10.65 (21.20 -1.47 -7.36 -1.72)
*
Db seq: 5'- UAGACCGUCGUGA -3' ySc-25S (2952-2967)
| |||||||||||
Qry seq: 3'- CGUCAACUGGCAGCACU -5' snR73 (44-32)
C Box-> Guide Seq Gap Sc: -1.59 (10 bp) Guide Seq-> D Box Gap Sc: -2.16 (59 bp)
No terminal stem: +-[C Box] -N-UUGUUAAA - 5' Stem Sc: -1.46 (2 bp)
| :| |
+---[D Box] - GCUUUAAU - 3' Stem Transit Sc: -0.90
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D'Bx] -- -- [D Bx] Length
>Meth Cm2956 [AUGAUGA] -- 10 bp -- [ 12 / 1 ] 0 [CUGC] -- 59 bp -- [CUGA] 103 bp
>Sc 29.52 [ 12.73 ] -- -1.59 -- [ 21.20 bits ] [3.40] -2.16 [8.05]
Seq: >snR73 29.52 (11-113) Cmpl: ySc-25S-Cm2956 Len: 103
Seq: GUUUAUGAUGAUUUCCACAUUUCACGACGGUCAACUGCGUUUUUCGAAUGUUUAUCGAUU
Seq: AACUUUGAUGAUAUUUCGCCUGUGACAGGGCGUGGUACUGAGC
====================================================================================================
snoRNA: snR74
Target rRNA methyl site: Am28
>> snR74 33.23 (11-90) Cmpl: ySc-18S-Am28 (snR74/Z4) 13/0 bp Gs-DpBox: 38 (28) Len: 80 TS
C Box: AAGAUGA Sc: 7.48 (15-21) C-D box dist: 63 bp
D Box: CUGA Sc: 8.05
D'Box: CUGA Sc: 7.34 D'box Guide Transit Sc: -0.67
Meth site found: 28 (snR74/Z4) Guide Seq Sc: 14.34 (24.17 -1.47 -7.36 -1.00)
*
Db seq: 5'- CAUAUGCUUGUCU -3' ySc-18S (25-39)
|||||||||||||
Qry seq: 3'- AGUCUGUAUACGAACAGA -5' snR74 (50-38)
C Box-> Guide Seq Gap Sc: -1.76 (16 bp) Guide Seq-> D Box Gap Sc: -2.76 (29 bp)
Terminal stem: +-[C Box] -N- ACGUCGUA - 5' Stem Sc: 2.31 (4 bp)
| |||| : |
+---[D Box] - UGCAAUUU - 3' Stem Transit Sc: -1.11
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D'Bx] -- -- [D Bx] Length
>Meth Am 28 [AAGAUGA] -- 16 bp -- [ 13 / 0 ] 1 [CUGA] -- 29 bp -- [CUGA] 80 bp
>Sc 33.23 [ 7.48 ] -- -1.76 -- [ 24.17 bits ] [7.34] -2.76 [8.05]
Seq: >snR74 33.23 (11-90) Cmpl: ySc-18S-Am28 Len: 80
Seq: GCAGAAGAUGAAACAAAUUACUCAAAUAGACAAGCAUAUGUCUGAUCUUCAUGAUUGAAA
Seq: AGAGCAAUUAGUGUCUGAUG
====================================================================================================
snoRNA: snR75
Target rRNA methyl site: Gm2286
>> snR75 35.02 (11-95) Cmpl: ySc-25S-Gm2286 (snR75/Z5) 11/0 bp Gs-DpBox: 30 (20) Len: 85
C Box: AUGAUGA Sc: 12.73 (15-21) C-D box dist: 68 bp
D Box: CUGA Sc: 8.05
D'Box: CUGA Sc: 7.34 D'box Guide Transit Sc: -0.67
Meth site found: 2286 (snR75/Z5) Guide Seq Sc: 11.64 (21.12 -1.12 -7.36 -1.00)
*
Db seq: 5'- CUCGUCAUCUA -3' ySc-25S (2283-2295)
|||||||||||
Qry seq: 3'- AGUCUGAGCAGUAGAU -5' snR75 (40-30)
C Box-> Guide Seq Gap Sc: -1.59 (8 bp) Guide Seq-> D Box Gap Sc: -1.59 (44 bp)
No terminal stem: +-[C Box] -N- UUUUGGUU - 5' Stem Sc: -2.17 (2 bp)
| |: :
+---[D Box] - AGCUGUUU - 3' Stem Transit Sc: -0.90
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D'Bx] -- -- [D Bx] Length
>Meth Gm2286 [AUGAUGA] -- 8 bp -- [ 11 / 0 ] 1 [CUGA] -- 44 bp -- [CUGA] 85 bp
>Sc 35.02 [ 12.73 ] -- -1.59 -- [ 21.12 bits ] [7.34] -1.59 [8.05]
Seq: >snR75 35.02 (11-95) Cmpl: ySc-25S-Gm2286 Len: 85
Seq: UUUUAUGAUGAGAUAUUUAUAGAUGACGAGUCUGAUCAUUCGUGAAGACACAACUAUUAA
Seq: AAUUACCAUUCAUGCCUUUCUGAAG
====================================================================================================
snoRNA: snR76
Target rRNA methyl site: Cm2195
>> snR76 36.53 (11-111) Cmpl: ySc-25S-Cm2195 (snR76/Z6) 13/1 bp Gs-DpBox: 24 (14) Len: 101 TS
C Box: AUGAGGA Sc: 8.23 (15-21) C-D box dist: 84 bp
D Box: CUGA Sc: 8.05
D'Box: CUGA Sc: 7.34 D'box Guide Transit Sc: -0.67
Meth site found: 2195 (snR76/Z6) Guide Seq Sc: 14.01 (24.56 -1.47 -7.36 -1.72)
*
Db seq: 5'- UGCCCAGUGCUCUG -3' ySc-25S (2191-2200)
||||||||||| ||
Qry seq: 3'- AGUCACGGGUCACGACAC -5' snR76 (37-24)
C Box-> Guide Seq Gap Sc: -4.76 (2 bp) Guide Seq-> D Box Gap Sc: -2.16 (64 bp)
Strong terminal stem: +-[C Box] -N- AGGUAACA - 5' Stem Sc: 7.60 (8 bp)
| ||||||||
+---[D Box] - UCCAUUGU - 3' Stem Transit Sc: -1.11
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D'Bx] -- -- [D Bx] Length
>Meth Cm2195 [AUGAGGA] -- 2 bp -- [ 13 / 1 ] 0 [CUGA] -- 64 bp -- [CUGA] 101 bp
>Sc 36.53 [ 8.23 ] -- -4.76 -- [ 24.56 bits ] [7.34] -2.16 [8.05]
Seq: >snR76 36.53 (11-111) Cmpl: ySc-25S-Cm2195 Len: 101
Seq: GGAAAUGAGGAUCCACAGCACUGGGCACUGAGGGGGAAACAAAUAUCCUUUCAAAUGAGU
Seq: GACAAUGCUUUAGCGGGCCUAGAAAACCCGCGCAACUGAUC
====================================================================================================
snoRNA: snR77
Target rRNA methyl site: Um578
>> snR77 35.79 (11-94) Cmpl: ySc-18S-Um578 (snR77/Z7) 14/0 bp Gs-DpBox: 38 (28) Len: 84 TS
C Box: AUGAUGA Sc: 12.73 (15-21) C-D box dist: 67 bp
D Box: CUGA Sc: 8.05
D'Box: CUGA Sc: 7.34 D'box Guide Transit Sc: -0.67
Meth site found: 578 (snR77/Z7) Guide Seq Sc: 13.15 (22.98 -1.47 -7.36 -1.00)
*
Db seq: 5'- CGGUAAUUCCAGCU -3' ySc-18S (575-590)
|:||||||||||||
Qry seq: 3'- AGUCGGUCAUUAAGGUCGA -5' snR77 (51-38)
C Box-> Guide Seq Gap Sc: -1.76 (16 bp) Guide Seq-> D Box Gap Sc: -2.76 (32 bp)
Terminal stem: +-[C Box] -N- ACUUGUUU - 5' Stem Sc: 0.82 (5 bp)
| |:|||
+---[D Box] - CCUAGCAA - 3' Stem Transit Sc: -1.11
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D'Bx] -- -- [D Bx] Length
>Meth Um 578 [AUGAUGA] -- 16 bp -- [ 14 / 0 ] 1 [CUGA] -- 32 bp -- [CUGA] 84 bp
>Sc 35.79 [ 12.73 ] -- -1.76 -- [ 22.98 bits ] [7.34] -2.76 [8.05]
Seq: >snR77 35.79 (11-94) Cmpl: ySc-18S-Um578 Len: 84
Seq: UCAUAUGAUGAUUAUAACAAAAACAAAAGCUGGAAUUACUGGCUGAACGAGUAUAUGUUG
Seq: AUACGUUUUUGCACUAUCCUGACC
====================================================================================================
snoRNA: snR78
Target rRNA methyl site: Um2419
>> snR78 27.39 (11-92) Cmpl: ySc-25S-Um2419 (snR78/Z8) 12/0 bp Gs-DpBox: 38 (28) Len: 82 TS
C Box: UUGAUGA Sc: 8.73 (15-21) C-D box dist: 65 bp
D Box: CUGA Sc: 8.05
D'Box: CUGA Sc: 7.34 D'box Guide Transit Sc: -0.67
Meth site found: 2419 (snR78/Z8) Guide Seq Sc: 8.77 (18.25 -1.12 -7.36 -1.00)
*
Db seq: 5'- GACUCUAGUUUG -3' ySc-25S (2416-2430)
:|||||||||||
Qry seq: 3'- AGUCUUUGAGAUCAAAC -5' snR78 (49-38)
C Box-> Guide Seq Gap Sc: -1.76 (16 bp) Guide Seq-> D Box Gap Sc: -2.76 (32 bp)
Terminal stem: +-[C Box] -N- CCUUAUUA - 5' Stem Sc: 0.79 (2 bp)
| || |
+---[D Box] - GGUUUUUA - 3' Stem Transit Sc: -1.11
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D'Bx] -- -- [D Bx] Length
>Meth Um2419 [UUGAUGA] -- 16 bp -- [ 12 / 0 ] 1 [CUGA] -- 32 bp -- [CUGA] 82 bp
>Sc 27.39 [ 8.73 ] -- -1.76 -- [ 18.25 bits ] [7.34] -2.76 [8.05]
Seq: >snR78 27.39 (11-92) Cmpl: ySc-25S-Um2419 Len: 82
Seq: UCCCUUGAUGACCAAAAUAAAUUUUUACAAACUAGAGUUUCUGAAUCUUUUGUGAUUAGA
Seq: ACGUUUAUUCUUAUUUCUGAGG
====================================================================================================
snoRNA: snR79
Target rRNA methyl site: Cm1006
>> snR79 31.27 (11-95) Cmpl: ySc-18S-Cm1006 (snR79/Z9) 16/1 bp Gs-D box: 74 (64) Len: 85
C Box: AUGAUGA Sc: 12.73 (15-21) C-D box dist: 68 bp
D Box: CUGA Sc: 8.05
D'Box: None D box Guide Transit Sc: -1.44
Meth site found: 1006 (snR79/Z9) Guide Seq Sc: 14.91 (27.95 -3.32 -7.36 -2.35)
*
Db seq: 5'- GAUACCGUCGUAGUCUU -3' ySc-18S (1003-1021)
|||||||| ||||||||
Qry seq: 3'- AGUCUAUGGCAACAUCAGAA -5' snR79 (90-74)
C Box-> Guide Seq Gap Sc: -2.09 (52 bp)
No terminal stem: +-[C Box] -N- UUUUAUUU - 5' Stem Sc: -2.41 (1 bp)
| | ||
+---[D Box] - AUUUUAUU - 3' Stem Transit Sc: -0.90
>Summary [ C Box ] -- -- [ Cmpl/ Mism ] X [D Bx] Length
>Meth Cm1006 [AUGAUGA] -- 52 bp -- [ 16 / 1 ] -1 [CUGA] 85 bp
>Sc 31.27 [ 12.73 ] -- -2.09 -- [ 27.95 bits ] [8.05]
Seq: >snR79 31.27 (11-95) Cmpl: ySc-18S-Cm1006 Len: 85
Seq: UUUAAUGAUGAUAGCAUGAUUUAUGUUGCUCGAAGUUAAUCGAUGUGAGCACAAUGAUUU
Seq: CUCAAGACUACAACGGUAUCUGAAU
====================================================================================================