Supplemental Table 2C. Aeropyrum pernix sRNA Genomic Loci

Coordinates for main chromosome of Ape, original 6/99 release of genome sequence.

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Name Start Coord End Coord Strand Notes
sR5 77284 77356 +  
sR1 143608 143554 -  
sR17 145450 145508 +  
sR9 171314 171247 -  
sR16 235743 235684 -  
sR21 277650 277588 -  
sR3 428622 428685 +  
sR20 501775 501713 -  
sR23 509163 509109 - 70 nt from sR7
sR7 509234 509293 +  
sR12 637701 637780 +  
sR22 679270 679333 +  
sR2 722994 722940 -  
sR11 840962 840899 -  
sR6 864975 864911 -  
sR10 1067434 1067490 +  
sR8 1177558 1177490 -  
sR19 1178234 1178296 +  
sR18 1230972 1230908 -  
sR14 1338310 1338243 -  
sR15 1357409 1357473 +  
sR13 1430207 1430281 +  
sR4 1462421 1462478 +  

Locus coordinates include 5' flanking sequence (4 nt upstream of C box) and 3' flanking sequence (2 nt downstream of D box). These are only general estimates of bounds based on sRNA molecules characterized from other species.