Three sRNAs were identified by Gaspin et al. (sR38, sR34, sR39) that were not described in Omer et al.. These sRNAs were given the next three unused consecutive names (sR58-sR60) above the Omer et al. sRNA names to allow one consistent naming system (referred to as Lowe/Eddy on this website). Thirteen sRNAs were identified in Omer et al. (sR22, sR25, sR27, sR30, sR31, sR32, sR40, sR41, sR46, sR49, sR53, sR56, sR57) that were not described in Gaspin et al..
Note: Genome locus coordinates within Gaspin et al. (Table 1) are incorrect for 24 of the 46 sRNA genes (all sRNAs on the negative strand) according to the current version of the P. abyssi genome. Consequently, determination of overlapping gene identifications between the Gaspin et al. set and the Omer et al. P. abyssi sRNAs is only possible by direct sequence comparison, or use of the tables below.
Sorted by Gaspin et al. sRNA number
Sorted by Lowe/Eddy sRNA number
Note (11/29/00): More corrections to the mapping table: Gaspin et al. sR43 corresponds to Omer et al. sR43 (not sR58/61). Gaspin et al. sR38 now corresponds to Lowe/Eddy sR58. All text & tables have been updated accordingly.
Note (7/25/00): What formerly was being called sR58 was actually already identified and named by Omer et al. as sR37. Now, Gaspin et al. sR28 correctly corresponds to Omer et al. sR37 (not sR58). To fill the gap in numbering, sR61 became sR58. The text and tables on this page reflect the corrected sR numbers.