GtRNAdb

tRNAscan-SE Analysis of Rattus norvegicus (rn4 Nov 2004)

>> Main Overview
>> tRNAs by Isotype
>> tRNAs by Locus
>> Secondary Structures
>> tRNA Alignments
>> FASTA Seqs
>> Run Options/Stats
>> Analysis Notes
>> Genome DB
>> Genome Seq
tRNAs Sorted by tRNA Isoacceptor Type (text)
--------------------------------------------------------------------------------------------------------------------------------
chr6    	4358	138677394	138677323	Ala	AGC	naaattggag	aaaaaaaaaa	0	0	23.86	18.22	5.64 Bo
chr16   	4069	16681718	16681651	Ala	AGC	ngcggggttg	gaaaaaaagg	0	0	24.43	13.46	10.97 Bo
chr1    	6722	211515213	211515280	Ala	AGC	caaggggttg	angannnnnn	0	0	25.89	18.57	7.32 Bo
chr1    	5061	172198072	172198144	Ala	AGC	atgtgagggg	aaaaaaaaaa	0	0	26.80	20.44	6.36 Bo
chr17   	4624	22037203	22037131	Ala	AGC	agtctcgagg	aaaaagaaaa	0	0	31.68	19.71	11.97 Bo
chr4    	7766	76006848	76006778	Ala	AGC	aaaagaggct	agcaccaaga	0	0	33.33	23.20	10.13 Bo
chr17   	3793	51714582	51714510	Ala	AGC	tactcatggg	aaatagaaaa	0	0	33.69	26.15	7.54 Bo
chr4    	8511	54100398	54100326	Ala	AGC	aaactagggg	aaaaaaaaaa	0	0	36.04	26.62	9.42 Bo
chr7    	1896	57006214	57006281	Ala	AGC	ccaggggttg	gaaaaaaaga	0	0	36.66	27.94	8.72 Bo
chr17   	3719	58251394	58251322	Ala	AGC	ggccttgggg	aaaaaaaaaa	0	0	37.02	25.05	11.97 Bo
chr6    	1992	76903134	76903201	Ala	AGC	gtgagggttg	gaaaaaaaaa	0	0	39.65	27.41	12.24 Bo
chr2    	1130	48196462	48196535	Ala	AGC	ggagaagggg	annnnnnnnn	0	0	40.69	32.33	8.36 Bo
chrX    	1311	51880806	51880878	Ala	AGC	caagaacggg	aaaaaaaaag	0	0	42.60	26.72	15.88 Bo
chr18   	435	21805830	21805904	Ala	AGC	tgtttttggg	aaaaaaaaaa	0	0	43.05	33.16	9.89 Bo
chr5    	4414	150235588	150235660	Ala	AGC	gtgataaggg	aaaaaaaaaa	0	0	43.99	28.24	15.75 Bo
chr4    	8134	62635933	62635860	Ala	AGC	aataaagggg	aaaaaaaaaa	0	0	44.98	36.80	8.18 Bo
chr17   	3868	49022824	49022752	Ala	AGC	ttcttacatt	catgttctca	0	0	55.70	34.35	21.35 Bo
chr4    	9144	12812547	12812473	Ala	AGC	gtacagcggg	aaaaagaaaa	0	0	55.95	41.71	14.24 Eu
chr3    	7396	145096112	145096040	Ala	AGC	tagtgagggg	aaaaaaaaaa	0	0	56.34	28.52	27.82 Eu
chr10   	7459	97496222	97496151	Ala	AGC	aatatgatgg	agaggggcgg	0	0	57.13	40.69	16.44 Bo
chr11   	4511	13690752	13690681	Ala	AGC	gccaggggtt	aataataata	0	0	57.20	47.01	10.19 Eu
chr4    	3883	158840050	158840124	Ala	AGC	aattccgggg	aaagaaaaga	0	0	57.27	41.34	15.93 Eu
chr17   	1608	48913402	48913474	Ala	AGC	ttatcagctc	gttattacct	0	0	57.79	33.77	24.02 Bo
chr17   	1609	48914725	48914797	Ala	AGC	ttatcagctc	gttattacct	0	0	57.79	33.77	24.02 Bo
chr1    	6234	206096562	206096634	Ala	AGC	aattatggct	cgcatagttt	0	0	58.48	35.52	22.96 Bo
chr18   	934	31717868	31717940	Ala	AGC	tgatcagctc	gttattacct	0	0	59.41	35.54	23.87 Bo
chr17   	3877	48894226	48894154	Ala	AGC	gccatcagga	gttttgcatc	0	0	63.06	39.95	23.11 Bo
chr2    	2057	104709489	104709561	Ala	AGC	cactcgtgga	attttcttcc	0	0	63.68	41.02	22.66 Bo
chr6    	7600	25473989	25473917	Ala	AGC	cactacagct	cttccttttg	0	0	63.68	41.02	22.66 Bo
chr17   	3815	51166529	51166458	Ala	AGC	ctccgtgtgg	gttttcgaga	0	0	77.18	53.38	23.80 Bo
chr17   	3817	51154095	51154024	Ala	AGC	cttccgtgtc	gtattttcaa	0	0	77.18	53.38	23.80 Bo
chr17   	1675	51142794	51142865	Ala	AGC	gttcgccagc	ttctagccat	0	0	77.42	52.26	25.16 Bo
chr17   	3819	51141803	51141732	Ala	AGC	gtccgccagc	ttctaaccgt	0	0	77.42	52.26	25.16 Bo
chr17   	3821	51129505	51129434	Ala	AGC	tctgggcagt	gatttttgat	0	0	81.40	56.28	25.12 Bo

chrX    	6350	24826889	24826818	Ala	CGC	gacaggggtt	cccccaaaaa	0	0	59.63	51.53	8.10 Eu
chr3    	1329	38939140	38939211	Ala	CGC	cttcaggctg	agcagccgta	0	0	73.12	53.51	19.61 Bo
chr17   	3820	51133645	51133574	Ala	CGC	tggtgtaggt	aagctttttc	0	0	74.81	51.23	23.58 Bo
chr17   	1601	48886623	48886694	Ala	CGC	tatatcagct	gttccttttt	0	0	78.91	55.32	23.59 Bo

chr1    	14851	80284541	80284472	Ala	GGC	gtgaggggct	tattaaaaat	0	0	36.29	22.52	13.77 Bo
chr5    	7515	159700583	159700512	Ala	GGC	aaagggagcc	aaatggaagg	0	0	55.75	43.23	12.52 Bo

chrX    	2708	123636082	123636153	Ala	TGC	agtgaggctt	agctttttgt	0	0	56.08	43.72	12.36 Eu
chrX    	2734	124073897	124073968	Ala	TGC	tagggggctt	agcttttgct	0	0	56.52	43.17	13.35 Eu
chrX    	2713	123802940	123803011	Ala	TGC	agtgaggctt	agctttttgt	0	0	59.04	45.69	13.35 Eu
chrX    	2716	123816637	123816708	Ala	TGC	agtggggctt	agccttttgt	0	0	59.04	45.69	13.35 Eu
chrX    	2726	123917250	123917321	Ala	TGC	agtgaggctt	agctttttgt	0	0	59.04	45.69	13.35 Eu
chrX    	2741	124154044	124154115	Ala	TGC	atggaggctt	agctttttgc	0	0	59.04	45.69	13.35 Eu
chrX    	2743	124157696	124157767	Ala	TGC	atggaggctt	agctttttgc	0	0	59.04	45.69	13.35 Eu
chrX    	4149	124191272	124191201	Ala	TGC	agtgaggctt	agccttttgt	0	0	59.04	45.69	13.35 Eu
chrX    	4163	123860170	123860099	Ala	TGC	agtgaggctt	agctttttgt	0	0	59.04	45.69	13.35 Eu
chrX    	4158	123950104	123950033	Ala	TGC	agagaggctt	agctttttgt	0	0	64.24	45.55	18.69 Eu
chrX    	4146	124233994	124233923	Ala	TGC	ctgccagctt	ggtgttccct	0	0	66.70	43.11	23.59 Bo
chr17   	3818	51144042	51143971	Ala	TGC	ttcaggtaca	tcttttgagc	0	0	71.73	48.45	23.28 Bo
chr12   	4747	32314698	32314627	Ala	TGC	gttttcgtca	ctttttagtt	0	0	72.71	49.12	23.59 Bo
chr10   	12027	34100221	34100150	Ala	TGC	gagagcaggt	ggtggttgta	0	0	74.45	50.86	23.59 Bo
chr12   	2135	32319862	32319933	Ala	TGC	aaaagcacca	gtttattttt	0	0	74.45	50.86	23.59 Bo
--------------------------------------------------------------------------------------------------------------------------------
chr2    	9397	104708525	104708453	Arg	ACG	cctcatgaat	agcttttgga	0	0	67.96	51.06	16.90 Bo
chr17   	1630	50135647	50135719	Arg	ACG	ttatcgtggc	gccttgcgtt	0	0	68.07	51.18	16.89 Bo
chr8    	4697	128302562	128302490	Arg	ACG	cctcagcact	aaatgtgcgt	0	0	68.07	51.18	16.89 Bo
chr15   	1035	32584669	32584741	Arg	ACG	taatgtctgc	ttgggactgg	0	0	72.37	52.49	19.88 Bo
chr17   	1587	48805700	48805772	Arg	ACG	atctagagat	gcatccttat	0	0	72.37	52.49	19.88 Bo
chr17   	1599	48878835	48878907	Arg	ACG	tacgtgtacg	gaggtgtgcc	0	0	72.37	52.49	19.88 Bo

chr10   	5710	96366401	96366473	Arg	CCG	atcccgtggt	cacgctaact	0	0	65.49	49.24	16.25 Bo
chr10   	12841	12816654	12816582	Arg	CCG	gccggcgtag	ctgcttgtat	0	0	68.22	53.54	14.68 Bo
chr17   	1679	51173891	51173963	Arg	CCG	cttgccacct	gtgtgctttt	0	0	69.88	52.79	17.09 Bo

chr10   	4326	83368889	83368961	Arg	CCT	ctacaagtgg	gaaggatcta	0	0	60.25	50.83	9.42 Bo
chr4    	1504	66107274	66107346	Arg	CCT	agtactagaa	gtgctttttt	0	0	67.28	54.18	13.10 Bo
chr10   	12842	12814793	12814721	Arg	CCT	ctccctgtca	agaggttgtg	0	0	71.53	57.48	14.05 Bo
chr10   	7193	105490790	105490718	Arg	CCT	tttttatcgc	gtgctctctt	0	0	73.41	55.84	17.57 Bo
chrX    	2426	99786934	99787006	Arg	CCT	tgctgtgtta	taagtttgtg	0	0	73.52	52.02	21.50 Bo
chr1    	15620	59448946	59448874	Arg	CCT	atgtaggtgg	gaagagtctg	0	0	73.88	56.31	17.57 Bo
chr10   	12851	12786779	12786707	Arg	CCT	gggactagct	ggttgagact	0	0	73.88	56.31	17.57 Bo
chr10   	1419	36365946	36366018	Arg	CCT	atgtaggtgg	gaagagtctg	0	0	73.88	56.31	17.57 Bo
chr10   	6097	105490367	105490439	Arg	CCT	cgtgctgtgg	gaagagtctg	0	0	73.88	56.31	17.57 Bo

chr17   	1585	48801858	48801930	Arg	TCG	ctccatgtgg	atctggatag	0	0	69.08	49.20	19.88 Bo
chr17   	3825	51102805	51102733	Arg	TCG	aactcagagc	gcaatttttg	0	0	69.08	49.20	19.88 Bo
chr17   	1584	48780592	48780664	Arg	TCG	ctgttcctgt	gcaacacttt	0	0	69.55	49.67	19.88 Bo
chr10   	6098	105491185	105491257	Arg	TCG	gccgtaggta	aaatattttc	0	0	70.52	51.50	19.02 Bo
chr1    	3877	135213410	135213482	Arg	TCG	ttatgctgac	gatcatggtt	0	0	76.93	58.34	18.59 Bo

chr1    	8839	252317325	252317253	Arg	TCT	ggagggaaga	gaagttgttt	0	0	65.99	55.51	10.48 Eu
chr13   	2313	89592276	89592349	Arg	TCT	gtgtggtgag	gtcacctggc	0	0	76.29	56.97	19.32 Bo
chr1    	10113	214863230	214863145	Arg	TCT	agacacacct	cttttatttt	214863193	214863181	70.50	50.05	20.45 Bo
chr2    	6477	218939987	218939903	Arg	TCT	tccaacaggt	cgacgtttta	218939950	218939939	71.18	52.88	18.30 Bo
chr17   	1622	49055270	49055368	Arg	TCT	ctttatgaat	ttgttttcat	49055308	49055332	50.24	30.73	19.51 Bo
chr17   	1650	50268584	50268669	Arg	TCT	caaccaagtg	ggtatctttt	50268621	50268633	71.85	52.77	19.08 Bo
chr10   	10827	55882920	55882834	Arg	TCT	cccgccaggt	attttatttt	55882883	55882870	71.15	50.70	20.45 Bo
chr14   	2730	93468545	93468630	Arg	TCT	gcaggaagct	ctctttttct	93468582	93468594	71.63	51.18	20.45 Bo
--------------------------------------------------------------------------------------------------------------------------------
chr11   	746	36915452	36915526	Asn	GTT	tgtgtggctt	tcatgtgttt	0	0	34.41	19.32	15.09 Bo
chr1    	6224	206036638	206036710	Asn	GTT	aaaaacaagt	tctcatggct	0	0	62.10	45.82	16.28 Bo
chr10   	9278	75730211	75730138	Asn	GTT	atattctagt	agtacctctc	0	0	67.33	50.47	16.86 Eu
chr6    	177	5871309	5871382	Asn	GTT	aaaggtaacc	acaagtatag	0	0	76.67	58.04	18.63 Bo
chr2    	4111	191138918	191138991	Asn	GTT	ctctccctgt	tctcgtggct	0	0	80.50	57.23	23.27 Bo
chr2    	4120	191199119	191199192	Asn	GTT	agattcatat	agccttttaa	0	0	80.50	57.23	23.27 Bo
chr10   	8581	86451598	86451525	Asn	GTT	aaccatcgcc	gtttgtatat	0	0	82.24	58.97	23.27 Bo
chr12   	353	6310286	6310359	Asn	GTT	tggcagctgg	gcagctttca	0	0	82.24	58.97	23.27 Bo
chr13   	3824	86881813	86881740	Asn	GTT	agcatcacct	gtgggagcat	0	0	82.24	58.97	23.27 Bo
chr17   	2846	92696407	92696334	Asn	GTT	gagcaccaaa	ccctagcttt	0	0	82.24	58.97	23.27 Bo
chr2    	4134	191308127	191308200	Asn	GTT	taccctgcat	gtgccttttg	0	0	82.24	58.97	23.27 Bo
chr2    	7267	191278100	191278027	Asn	GTT	cttcaacacc	acggcgcctg	0	0	82.24	58.97	23.27 Bo
chr7    	9441	10971496	10971423	Asn	GTT	tcacaatgtc	actatgattc	0	0	82.24	58.97	23.27 Bo
chr2    	4115	191152216	191152289	Asn	GTT	ttgtccttgt	agtacctttc	0	0	83.49	61.01	22.48 Bo
--------------------------------------------------------------------------------------------------------------------------------
chr1    	6165	204873337	204873416	Asp	ATC	agtgaggaac	gaagaaaaac	204873373	204873382	36.09	16.23	19.86 Bo

chrX    	6496	21193436	21193365	Asp	GTC	ttataagtca	acattgaagt	0	0	65.23	46.47	18.76 Bo
chr10   	2458	55793253	55793324	Asp	GTC	ttcagcttat	gaagtgtact	0	0	72.92	48.38	24.54 Bo
chr12   	2132	32315227	32315298	Asp	GTC	gaatggctag	gctgcgcatg	0	0	72.92	48.38	24.54 Bo
chr12   	2134	32318545	32318616	Asp	GTC	tcagctctct	attgtcaaac	0	0	72.92	48.38	24.54 Bo
chr13   	2185	86984063	86984134	Asp	GTC	acagatgtcg	acataaggag	0	0	72.92	48.38	24.54 Bo
chr13   	3804	86965427	86965356	Asp	GTC	gtctctgtcg	acattgaagt	0	0	72.92	48.38	24.54 Bo
chr13   	3807	86956231	86956160	Asp	GTC	gctgtcgtcg	acatgatgtc	0	0	72.92	48.38	24.54 Bo
chr13   	3813	86933996	86933925	Asp	GTC	gctgtcgtcg	acatgatgtc	0	0	72.92	48.38	24.54 Bo
chr13   	3816	86914172	86914101	Asp	GTC	gctgtcgtcg	acatgatgtc	0	0	72.92	48.38	24.54 Bo
chr13   	3823	86885269	86885198	Asp	GTC	attacggttg	acgcgtaact	0	0	72.92	48.38	24.54 Bo
chr13_random	20	467102 	467031 	Asp	GTC	gctgtcgtcg	acatgatgtc	0	0	72.92	48.38	24.54 Bo
chr13_random	23	458960 	458889 	Asp	GTC	gctgtcgtcg	acatgatgtc	0	0	72.92	48.38	24.54 Bo
chr13_random	3	449532 	449603 	Asp	GTC	gctgtcgtcg	acatgatgtc	0	0	72.92	48.38	24.54 Bo
chr7    	8741	30481850	30481779	Asp	GTC	gctgtgcagt	gcataatgac	0	0	72.92	48.38	24.54 Bo
chr7    	8813	28123233	28123162	Asp	GTC	tcctcacagc	gttgtaaaca	0	0	74.76	50.21	24.55 Bo
--------------------------------------------------------------------------------------------------------------------------------
chr4    	5896	152934622	152934551	Cys	GCA	aagttaagca	tatcctctca	0	0	55.50	37.47	18.03 Bo
chr4    	7721	76406431	76406360	Cys	GCA	cggtatcagt	tctcatgtga	0	0	63.68	50.18	13.50 Bo
chr4    	1748	76293618	76293689	Cys	GCA	cctcagccat	attggtatct	0	0	67.15	49.33	17.82 Bo
chr4    	1751	76311167	76311238	Cys	GCA	atatataagt	accttttgtc	0	0	67.56	53.27	14.29 Bo
chr14   	5625	33031565	33031494	Cys	GCA	acgagtcact	ttccatagat	0	0	72.04	57.94	14.10 Bo
chr4    	1744	76266477	76266548	Cys	GCA	cggtatcagt	tttcatgtga	0	0	73.11	53.94	19.17 Bo
chr10   	8571	86518196	86518125	Cys	GCA	gagaaggtga	tccttttgtt	0	0	73.73	55.81	17.92 Bo
chr4    	1742	76251506	76251577	Cys	GCA	actggtcagt	tatttatgtc	0	0	74.20	55.02	19.18 Bo
chr4    	1743	76265462	76265533	Cys	GCA	gtaaacaggt	accacacatt	0	0	74.20	55.02	19.18 Bo
chr4    	1745	76269475	76269546	Cys	GCA	ataaacaggt	gcctttcttt	0	0	74.20	55.02	19.18 Bo
chr4    	1759	76430081	76430152	Cys	GCA	taaagcagaa	tcttattgtc	0	0	74.20	55.02	19.18 Bo
chr4    	1760	76431060	76431131	Cys	GCA	cctacaaagt	tgctttaata	0	0	74.20	55.02	19.18 Bo
chr4    	7715	76442918	76442847	Cys	GCA	tggtaccagt	tatttatgtc	0	0	74.20	55.02	19.18 Bo
chr4    	7717	76417977	76417906	Cys	GCA	ataaacaggt	accacacatt	0	0	74.20	55.02	19.18 Bo
chr4    	7718	76416996	76416925	Cys	GCA	tggtaccaat	ttttgtctga	0	0	74.20	55.02	19.18 Bo
chr4    	7719	76410205	76410134	Cys	GCA	ataaacaggt	tcctaaggtt	0	0	74.20	55.02	19.18 Bo
chr4    	7720	76407443	76407372	Cys	GCA	ataaacaggt	aacaaaagtt	0	0	74.20	55.02	19.18 Bo
chr4    	7722	76400408	76400337	Cys	GCA	ataaacaggt	aacaaaagtt	0	0	74.20	55.02	19.18 Bo
chr4    	7723	76399393	76399322	Cys	GCA	tggtaccagt	tttcatgtga	0	0	74.20	55.02	19.18 Bo
chr4    	7725	76368700	76368629	Cys	GCA	ataaacaggt	accacacatt	0	0	74.20	55.02	19.18 Bo
chr4    	7726	76367709	76367638	Cys	GCA	tgataccagt	tttcatgtga	0	0	74.20	55.02	19.18 Bo
chr4    	7727	76364827	76364756	Cys	GCA	ataaacaggt	accacacatt	0	0	74.20	55.02	19.18 Bo
chr4    	7732	76334350	76334279	Cys	GCA	gcaagggcaa	ttaggtatct	0	0	74.20	55.02	19.18 Bo
chr4    	7733	76321168	76321097	Cys	GCA	gcaagaaggt	tgccagattc	0	0	74.20	55.02	19.18 Bo
chr4    	7737	76257954	76257883	Cys	GCA	taaagcagaa	tcttattgtc	0	0	74.20	55.02	19.18 Bo
chr4    	7738	76256990	76256919	Cys	GCA	cctataaggt	tgttttaata	0	0	74.20	55.02	19.18 Bo
chr8    	3546	109466766	109466837	Cys	GCA	ctgtctcact	gtgcactctt	0	0	74.20	55.02	19.18 Bo
chr4    	1750	76309093	76309164	Cys	GCA	ataagcaggt	attttttccc	0	0	74.26	55.02	19.24 Bo
chr4    	7731	76335929	76335858	Cys	GCA	ataaacaggt	tccctttttt	0	0	76.09	55.45	20.64 Bo
chr4    	7735	76313789	76313718	Cys	GCA	atggcaggaa	agtaattgtg	0	0	76.09	55.45	20.64 Bo
chr4    	7730	76342129	76342058	Cys	GCA	tattagtaaa	actcataatt	0	0	77.16	54.50	22.66 Bo
chr10   	8562	86551819	86551748	Cys	GCA	gtggccgtgc	cggagtcttt	0	0	77.18	59.26	17.92 Bo
chr6    	7701	24004888	24004817	Cys	GCA	agtggtcact	tttcacagac	0	0	77.65	58.48	19.17 Bo
chr8    	3547	109470191	109470262	Cys	GCA	gttggccacg	gagttaggct	0	0	77.65	58.48	19.17 Bo
chr10   	4742	86550029	86550100	Cys	GCA	caccagcaga	tgatgtttgt	0	0	77.71	58.47	19.24 Bo
chr10   	8526	86750732	86750661	Cys	GCA	tcagcggact	cgcggttatc	0	0	77.71	58.47	19.24 Bo
chr10   	8527	86750060	86749989	Cys	GCA	tgccagcaga	gctaggtttt	0	0	77.71	58.47	19.24 Bo
chr4    	1731	76106267	76106338	Cys	GCA	cctaccagca	tcctttccca	0	0	77.71	58.47	19.24 Bo
--------------------------------------------------------------------------------------------------------------------------------
chr2    	4133	191296540	191296611	Gln	CTG	acagtgtatg	ttctgtttac	0	0	68.61	50.02	18.59 Bo
chr2    	4199	192523369	192523440	Gln	CTG	ccacatatat	atctctttag	0	0	69.34	47.76	21.58 Bo
chr2    	7278	191194969	191194898	Gln	CTG	aagctatgtg	ttagtggtga	0	0	69.34	47.76	21.58 Bo
chr17   	1634	50167985	50168056	Gln	CTG	cacactgtgt	gtggtgtttt	0	0	72.91	51.33	21.58 Bo
chr2    	7283	191162142	191162071	Gln	CTG	agtatgcatg	ctctctttac	0	0	72.91	51.33	21.58 Bo
chr10   	10826	55883877	55883806	Gln	CTG	gagaagaggg	taagttttgc	0	0	73.65	50.36	23.29 Bo
chr17   	3809	51212243	51212172	Gln	CTG	taggtagggt	ttttgcattt	0	0	73.65	50.36	23.29 Bo
chr8    	2102	68979855	68979926	Gln	CTG	ccttcgtgct	gctcttttct	0	0	73.65	50.36	23.29 Bo
chr17   	1646	50252520	50252591	Gln	CTG	aaagtcgtgg	agtttgtttt	0	0	75.10	51.81	23.29 Bo

chr17   	1673	51114973	51115044	Gln	TTG	atcttttgtc	acaaaggctc	0	0	65.84	45.89	19.95 Bo
chr17   	3897	48788506	48788435	Gln	TTG	cagtgtcatg	aatgttaatt	0	0	68.31	52.31	16.00 Bo
chr17   	3898	48787972	48787901	Gln	TTG	cctcatgtgt	gttttccttt	0	0	68.31	52.31	16.00 Bo
chrX    	426	20899098	20899169	Gln	TTG	gcagcaaggt	tggaacgact	0	0	69.27	50.05	19.22 Bo
chr10   	8827	84570942	84570871	Gln	TTG	gccgccagca	cactgaacct	0	0	73.77	50.83	22.94 Bo
--------------------------------------------------------------------------------------------------------------------------------
chr4    	7749	76128886	76128815	Glu	CTC	gtatgaaatt	gttaagtttg	0	0	57.48	45.28	12.20 Bo
chr13   	3806	86964312	86964242	Glu	CTC	taatacatac	gcctctcttc	0	0	61.98	46.40	15.58 Bo
chr1    	16347	27529475	27529404	Glu	CTC	cccagcaagc	gtactgtttt	0	0	76.61	53.94	22.67 Bo
chr10   	11370	43941218	43941147	Glu	CTC	tactatctct	gtacactttt	0	0	76.61	53.94	22.67 Bo
chr13   	2187	86984895	86984966	Glu	CTC	ctactgtccc	gctgcctttt	0	0	76.61	53.94	22.67 Bo
chr13   	3809	86955188	86955117	Glu	CTC	ggacccacgc	gcctctcttc	0	0	76.61	53.94	22.67 Bo
chr13_random	22	466059 	465988 	Glu	CTC	ggacccacgc	gcctctcttc	0	0	76.61	53.94	22.67 Bo
chr13_random	25	457919 	457848 	Glu	CTC	ggacccacgc	gcctctcttc	0	0	76.61	53.94	22.67 Bo
chr17   	1684	51221554	51221625	Glu	CTC	tcttgcgagt	gtagggcttt	0	0	76.61	53.94	22.67 Bo
chr2    	7260	191313129	191313058	Glu	CTC	gcaaccagct	atactgtttt	0	0	76.61	53.94	22.67 Bo

chr16   	1087	36185099	36185170	Glu	TTC	tttatgtgtg	cgtgcttcta	0	0	55.40	41.92	13.48 Bo
chr2    	4117	191171838	191171909	Glu	TTC	ctttcgtcgc	gaccttttga	0	0	72.33	49.66	22.67 Bo
chr2    	4121	191203037	191203108	Glu	TTC	tttctgtgtg	tgtatttcca	0	0	72.33	49.66	22.67 Bo
chr15   	4050	54213535	54213464	Glu	TTC	tcttagaagc	ttctttgggg	0	0	74.37	53.30	21.07 Bo
chr15   	2138	61543594	61543665	Glu	TTC	tagtagcact	cagtatagct	0	0	75.00	51.69	23.31 Bo
chr9    	5628	33173225	33173154	Glu	TTC	taccggcagc	cagctctttt	0	0	75.00	51.69	23.31 Bo
chr1    	3402	109928999	109929070	Glu	TTC	cctcgtcagt	caaaagaccc	0	0	76.26	53.72	22.54 Bo
chr15   	2018	57083848	57083919	Glu	TTC	gcttgtcgtc	cgccaaagtc	0	0	76.26	53.72	22.54 Bo
chr17   	3881	48858994	48858923	Glu	TTC	gagtagaagc	ccttgttctt	0	0	76.26	53.72	22.54 Bo
chr8    	5785	109475673	109475602	Glu	TTC	cagcatcagt	catgagatct	0	0	76.26	53.72	22.54 Bo
--------------------------------------------------------------------------------------------------------------------------------
chr2    	7280	191175297	191175227	Gly	CCC	cttcaagggt	acatcctttt	0	0	73.00	52.95	20.05 Bo
chr2    	7274	191222293	191222223	Gly	CCC	ccctaacggt	gtgcgttctt	0	0	76.37	56.32	20.05 Bo
chr10   	687	15139535	15139605	Gly	CCC	ttactcaaca	tgttcgtttt	0	0	76.98	51.05	25.93 Bo
chr4    	2763	120589740	120589810	Gly	CCC	aatcccaaca	tgtcttttgt	0	0	76.98	51.05	25.93 Bo
chr2    	4110	191127559	191127629	Gly	CCC	tctacaggga	gagtctctgt	0	0	80.05	60.00	20.05 Bo

chr5    	12647	8857149	8857073	Gly	GCC	aaagtcaggg	agaaaaaaaa	0	0	33.64	13.40	20.24 Bo
chr10   	10828	55878347	55878277	Gly	GCC	taactcatct	tatgctgcct	0	0	81.62	61.57	20.05 Bo
chr13   	2163	86893027	86893097	Gly	GCC	cttccgccag	cgctgtcctt	0	0	81.62	61.57	20.05 Bo
chr17   	3835	50442132	50442062	Gly	GCC	cctggtcaag	gatataccac	0	0	81.62	61.57	20.05 Bo
chr19   	1668	40981176	40981246	Gly	GCC	ctacagccaa	cggtctcttt	0	0	81.62	61.57	20.05 Bo
chr19   	3456	40551525	40551455	Gly	GCC	cacagctgga	gagccttttt	0	0	81.62	61.57	20.05 Bo
chr19   	3457	40550763	40550693	Gly	GCC	cacagctgga	gtagcaatat	0	0	81.62	61.57	20.05 Bo
chr3    	10642	38939527	38939457	Gly	GCC	gctcgtgctt	gttccccttt	0	0	81.62	61.57	20.05 Bo
chr13   	2180	86957807	86957877	Gly	GCC	tgtgttcagg	gagtccagtc	0	0	82.15	62.58	19.57 Bo
chr13   	2182	86968689	86968759	Gly	GCC	tacagccagg	aagtttagtc	0	0	82.15	62.58	19.57 Bo
chr13_random	26	455383 	455313 	Gly	GCC	tgtgttcagg	gagtccagtc	0	0	82.15	62.58	19.57 Bo
chr13_random	28	447955 	447885 	Gly	GCC	tgtgttcagg	gagtccagtc	0	0	82.15	62.58	19.57 Bo
chr13_random	30	439916 	439846 	Gly	GCC	tgtgttcagg	gagtccagtc	0	0	82.15	62.58	19.57 Bo
chr13_random	5	460500 	460570 	Gly	GCC	tgtgttcagg	gagtccagtc	0	0	82.15	62.58	19.57 Bo
chr13_random	7	468637 	468707 	Gly	GCC	tgtgttcagg	gagtccagtc	0	0	82.15	62.58	19.57 Bo

chr13   	5237	43882766	43882695	Gly	TCC	gggatctgca	gcatgcccaa	0	0	53.66	43.37	10.29 Bo
chr13   	2186	86984563	86984634	Gly	TCC	cattggcgtt	tggtgtgcct	0	0	71.45	51.65	19.80 Bo
chr13   	3805	86964806	86964735	Gly	TCC	acttcgtgag	gcgggttcaa	0	0	71.45	51.65	19.80 Bo
chr10   	10838	55793753	55793682	Gly	TCC	tctttcacct	agggttagtt	0	0	73.26	52.83	20.43 Bo
chr13   	3808	86955693	86955622	Gly	TCC	cggctgtgcg	gcgtgcccaa	0	0	73.26	52.83	20.43 Bo
chr13   	3822	86886206	86886135	Gly	TCC	gtgttgtgct	gactatactt	0	0	73.26	52.83	20.43 Bo
chr13_random	21	466564 	466493 	Gly	TCC	cggctgtgcg	gcgtgcccaa	0	0	73.26	52.83	20.43 Bo
chr13_random	24	458422 	458351 	Gly	TCC	cggctgtgcg	gcgtgcccaa	0	0	73.26	52.83	20.43 Bo
chr2    	7261	191312733	191312662	Gly	TCC	ttgttagcct	tagggttgcc	0	0	73.26	52.83	20.43 Bo
--------------------------------------------------------------------------------------------------------------------------------
chr19   	3946	33822418	33822347	His	GTG	cgcgtggctc	cgtcgttctt	0	0	64.63	37.18	27.45 Bo
chr2    	4122	191204909	191204980	His	GTG	cacgtggctc	gtgtagtact	0	0	64.63	37.18	27.45 Bo
chr2    	4128	191239061	191239132	His	GTG	cgtgtggttc	tgaccggtga	0	0	64.63	37.18	27.45 Bo
chr2    	7262	191312044	191311973	His	GTG	ccggtggctc	tttggtagta	0	0	64.63	37.18	27.45 Bo
chr2    	7268	191277110	191277039	His	GTG	cgcgtggctc	cgtcgttctt	0	0	64.63	37.18	27.45 Bo
chr3    	3342	109164042	109164113	His	GTG	ccggtagctc	ttgtggcaac	0	0	64.63	37.18	27.45 Bo
chr3    	3352	109413543	109413614	His	GTG	ccggtagctc	ttgtggcaac	0	0	64.63	37.18	27.45 Bo
chr3    	3353	109415549	109415620	His	GTG	ctggtagctc	tttggtagta	0	0	64.63	37.18	27.45 Bo
chr3    	8573	109412998	109412927	His	GTG	ccggtagctc	ttgtggcaac	0	0	64.63	37.18	27.45 Bo
chr3    	8579	109171062	109170991	His	GTG	ccggtagctc	ttgtggcaac	0	0	64.63	37.18	27.45 Bo
chr3    	8580	109169556	109169485	His	GTG	ctggtagctc	ttgtggcaac	0	0	64.63	37.18	27.45 Bo
chr5    	10653	101534013	101533942	His	GTG	tcagtagctc	ggattgagga	0	0	64.63	37.18	27.45 Bo
--------------------------------------------------------------------------------------------------------------------------------
chr3    	8765	106713705	106713634	Ile	AAT	aggagctcca	ccaaagaacg	0	0	47.46	33.56	13.90 Bo
chr5    	5590	160090277	160090350	Ile	AAT	acaagcagtt	aagcctgaga	0	0	57.39	43.26	14.13 Eu
chr17   	3871	48967851	48967777	Ile	AAT	tcgcatgcct	nnnnnnnnnn	0	0	62.00	49.50	12.50 Eu
chr17   	1619	49016304	49016377	Ile	AAT	gctgccaact	tacataattt	0	0	63.77	55.30	8.47 Bo
chr17   	3858	50126997	50126924	Ile	AAT	cttgtgaagt	gaaggagctt	0	0	76.11	57.62	18.49 Bo
chr17   	1654	50319841	50319914	Ile	AAT	tataatatat	gtaaggtatc	0	0	78.44	59.96	18.48 Bo
chr10   	10837	55816648	55816575	Ile	AAT	cttcacatct	gtattttttt	0	0	80.66	62.17	18.49 Bo
chr10   	2454	55789265	55789338	Ile	AAT	taccgtggat	gaccctcaaa	0	0	80.66	62.17	18.49 Bo
chr17   	1602	48887210	48887283	Ile	AAT	tcgcatgcct	agtttctctt	0	0	80.66	62.17	18.49 Bo
chr17   	1652	50299844	50299917	Ile	AAT	tgatacagtt	ctagttgaag	0	0	80.66	62.17	18.49 Bo
chr2    	5727	258004800	258004873	Ile	AAT	cctcgaatct	gaagcgcaag	0	0	80.66	62.17	18.49 Bo
chr6    	3889	135571627	135571700	Ile	AAT	aactccatct	gaagcgcaaa	0	0	80.66	62.17	18.49 Bo

chr17   	1651	50289228	50289321	Ile	TAT	gagaaagcat	tgttttcttc	50289266	50289285	67.58	39.39	28.19 Bo
chr6    	253	7226400	7226492	Ile	TAT	ccacagcgga	cgattctttt	7226438	7226456	67.47	39.28	28.19 Bo
chr1    	2353	83483000	83483093	Ile	TAT	tgcggccgga	cttccttttt	83483038	83483057	68.37	40.18	28.19 Bo
--------------------------------------------------------------------------------------------------------------------------------
chr4    	6361	129262232	129262151	Leu	AAG	agacagtgga	gtagcttagt	0	0	57.92	47.84	10.08 Bo
chr1    	5254	179767371	179767452	Leu	AAG	ttaacagctg	gggtagtttt	0	0	69.84	50.16	19.68 Bo
chr10   	12023	34125238	34125157	Leu	AAG	agtgcatcaa	gtaacttttg	0	0	69.84	50.16	19.68 Bo
chr15   	871	27043544	27043625	Leu	AAG	cgttctcatc	actctgtttt	0	0	69.84	50.16	19.68 Bo
chr17   	3807	51214183	51214102	Leu	AAG	ctatggtagg	ctagcttaat	0	0	71.96	50.58	21.38 Bo
chr17   	3808	51214014	51213933	Leu	AAG	cccgtgtgga	ctagcttaat	0	0	71.96	50.58	21.38 Bo

chr10   	11369	43941542	43941437	Leu	CAA	acagtcgggt	cagctctttt	43941504	43941483	66.47	45.53	20.94 Bo
chr17   	3814	51183870	51183766	Leu	CAA	tccatcgtgt	caactttttt	51183832	51183812	68.79	44.70	24.09 Bo
chr17   	1681	51211655	51211760	Leu	CAA	tgagcagtgt	actatacttt	51211693	51211714	66.82	45.88	20.94 Bo

chr13   	3641	89656256	89656174	Leu	CAG	tgctcagtgt	actagtgttt	0	0	53.73	34.25	19.48 Bo
chr13   	2173	86934579	86934661	Leu	CAG	cagacctgct	agcttgcctt	0	0	66.61	45.10	21.51 Bo
chr13_random	29	440863 	440781 	Leu	CAG	cagacctgct	agcttgcctt	0	0	69.85	42.53	27.32 Eu
chr13   	2162	86886731	86886813	Leu	CAG	tctcctgtgt	aattcctttt	0	0	75.90	46.89	29.01 Bo
chr19   	214	10745624	10745706	Leu	CAG	atctccagtt	agttaaccat	0	0	75.90	46.89	29.01 Bo
chr19   	3207	44733893	44733811	Leu	CAG	tcctccagtt	agtttatctg	0	0	75.90	46.89	29.01 Bo
chr19   	4843	10746059	10745977	Leu	CAG	cactctccaa	aagcttacgt	0	0	75.90	46.89	29.01 Bo
chr13   	2168	86914756	86914838	Leu	CAG	cagacctgct	agcttgcctt	0	0	77.22	46.89	30.33 Bo
chr13   	2179	86956807	86956889	Leu	CAG	cagacctgct	agcttgcctt	0	0	77.22	46.89	30.33 Bo
chr13   	3800	86983592	86983510	Leu	CAG	cctttgtgta	agttttcttt	0	0	77.22	46.89	30.33 Bo
chr13_random	27	448956 	448874 	Leu	CAG	cagacctgct	agcttgcctt	0	0	77.22	46.89	30.33 Bo
chr13_random	4	459537 	459619 	Leu	CAG	cagacctgct	agcttgcctt	0	0	77.22	46.89	30.33 Bo
chr13_random	6	467678 	467760 	Leu	CAG	cagacctgct	agcttgcctt	0	0	77.22	46.89	30.33 Bo
chr17   	1598	48869892	48869974	Leu	CAG	tcctttgtgg	gctgtcattt	0	0	77.22	46.89	30.33 Bo

chr1    	16829	7662461	7662379	Leu	TAA	gcacgcctgc	atgtgaactt	0	0	77.01	48.40	28.61 Bo
chr1    	10114	214862725	214862643	Leu	TAA	cccttcaagt	aatctgcttt	0	0	80.01	46.62	33.39 Bo

chr1    	11779	179686585	179686504	Leu	TAG	agaaatggga	catccctagg	0	0	68.14	45.54	22.60 Bo
chr15   	5097	27067431	27067350	Leu	TAG	caagcggatt	gtgttttctt	0	0	70.94	48.78	22.16 Bo
chr15   	874	27064331	27064412	Leu	TAG	caagcggatt	gtgttttctt	0	0	70.94	48.78	22.16 Bo
chr10   	2467	55883436	55883517	Leu	TAG	tctccatgcg	cgccagagtt	0	0	72.19	50.81	21.38 Bo
--------------------------------------------------------------------------------------------------------------------------------
chr13   	2591	96639986	96640051	Lys	CTT	gggccagaga	cgtggtggct	0	0	23.19	13.18	10.01 Bo
chr5    	2014	87236479	87236551	Lys	CTT	atgtgagcta	ccacctgttg	0	0	42.78	31.70	11.08 Bo
chr1    	8770	253891197	253891125	Lys	CTT	cttcctctac	ccatctgttg	0	0	58.09	41.92	16.17 Eu
chr17   	820	20561012	20561084	Lys	CTT	ccccctatat	ccagttgttg	0	0	60.96	45.63	15.33 Eu
chr2    	2689	141588433	141588505	Lys	CTT	cttgtgtcag	ccaatttatt	0	0	62.11	51.97	10.14 Bo
chr1    	8775	253599596	253599524	Lys	CTT	agaccccatg	ccatctattg	0	0	63.42	55.70	7.72 Eu
chrUn   	406	25395087	25395159	Lys	CTT	ggtgtctttt	ccatctattg	0	0	64.78	42.34	22.44 Bo
chr10   	12028	34099741	34099669	Lys	CTT	tctgcacagc	caagtaaatg	0	0	80.47	57.81	22.66 Bo
chr10   	12844	12797964	12797892	Lys	CTT	ttgctatgca	tagctatttt	0	0	80.47	57.81	22.66 Bo
chr10   	12848	12791274	12791202	Lys	CTT	gagagcagtt	gctacacatt	0	0	80.47	57.81	22.66 Bo
chr10   	12849	12789670	12789598	Lys	CTT	atcgcaggac	agctatcatt	0	0	80.47	57.81	22.66 Bo
chr10   	453	12813474	12813546	Lys	CTT	atttatcgcc	gatacttttg	0	0	80.47	57.81	22.66 Bo
chr2    	4127	191228310	191228382	Lys	CTT	tcacaggagc	catgctttta	0	0	80.47	57.81	22.66 Bo
chr2    	7263	191311217	191311145	Lys	CTT	gacctacaga	cttccctttt	0	0	80.47	57.81	22.66 Bo
chr7    	3002	103651674	103651746	Lys	CTT	aataaacagc	caagcaaatg	0	0	80.47	57.81	22.66 Bo
chr6    	6097	93086789	93086717	Lys	CTT	gctttcgtcc	ttgcgttttt	0	0	80.72	58.28	22.44 Bo
chr8    	6301	95037789	95037717	Lys	CTT	cagtccagct	gttccttttg	0	0	80.72	58.28	22.44 Bo

chr17   	3846	50279294	50279222	Lys	TTT	ctctataaga	aaaggtcaca	0	0	80.08	62.43	17.65 Bo
chr2    	5177	227549029	227549101	Lys	TTT	cactctatga	ctactgtttt	0	0	83.22	63.57	19.65 Bo
chr7    	4533	137550679	137550751	Lys	TTT	gttcgtaaga	gaaggttact	0	0	83.31	61.95	21.36 Bo
chr1    	10115	214861201	214861129	Lys	TTT	atcctcaaga	gaagttgttt	0	0	83.80	62.78	21.02 Bo
chr1    	6856	214857859	214857931	Lys	TTT	tcgctcacga	ctgctgtttt	0	0	83.80	62.78	21.02 Bo
chr10   	10825	55884435	55884363	Lys	TTT	tcctacagga	cttagctttt	0	0	83.80	62.78	21.02 Bo
chr13   	5115	45941046	45940974	Lys	TTT	ggctcagagc	gctgcaaatt	0	0	83.80	62.78	21.02 Bo
chr13   	783	45940583	45940655	Lys	TTT	ctcctccagg	cttctgtttt	0	0	83.80	62.78	21.02 Bo
chr17   	1683	51216033	51216105	Lys	TTT	ccatgtaaga	tcagtgtttt	0	0	83.80	62.78	21.02 Bo
--------------------------------------------------------------------------------------------------------------------------------
chr17   	3869	49012419	49012347	Met	CAT	aggcctcata	gtctcttgca	0	0	61.05	38.17	22.88 Ts
chr17   	3895	48790030	48789959	Met	CAT	ctcacgcgtc	ggtggtacct	0	0	67.60	39.59	28.01 Bo
chr11   	1954	80916500	80916571	Met	CAT	tatagaagct	tgtgatggtc	0	0	68.98	40.96	28.02 Bo
chr17   	1583	48776775	48776846	Met	CAT	tctactagct	tgtgatggtc	0	0	68.98	40.96	28.02 Bo
chr17   	1647	50254996	50255067	Met	CAT	cttgcacaat	tgaaattatt	0	0	68.98	40.96	28.02 Bo
chr17   	3836	50441715	50441644	Met	CAT	tgctagctct	agaagcaatt	0	0	68.98	40.96	28.02 Bo
chr17   	3845	50280080	50280009	Met	CAT	attataatat	gttggcattt	0	0	68.98	40.96	28.02 Bo
chr17   	3856	50191004	50190933	Met	CAT	tcaacatgtt	ttaagctttt	0	0	68.98	40.96	28.02 Bo
chr2    	7573	182749875	182749804	Met	CAT	accagtaggt	tcggagactt	0	0	68.98	40.96	28.02 Bo
chr17   	3806	51216594	51216522	Met	CAT	agaatcactt	acttcttttc	0	0	74.93	54.78	20.15 Bo
chr17   	1682	51214465	51214537	Met	CAT	agcattgggc	gccaacacat	0	0	76.58	56.44	20.14 Bo
chr19   	2927	51837790	51837718	Met	CAT	ttgctaagga	tcctgcatta	0	0	79.85	59.49	20.36 Bo
chr7    	7114	94683015	94682943	Met	CAT	gctcgcaggt	caatactttt	0	0	79.85	59.49	20.36 Bo
--------------------------------------------------------------------------------------------------------------------------------
chr8    	4429	122925818	122925958	Phe	AAA	gctacgggct	cagagtggct	122925854	122925924	34.57	18.67	15.90 Bo

chrX    	2013	88737057	88737130	Phe	GAA	gtacaacaaa	gaggtttact	0	0	75.00	53.38	21.62 Bo
chr1    	6857	214859825	214859897	Phe	GAA	caccatcttc	agtctctgtt	0	0	82.59	59.44	23.15 Bo
chr1    	6855	214853005	214853077	Phe	GAA	cataagcaca	gtggttttgt	0	0	84.19	62.58	21.61 Bo
chr12   	2133	32318090	32318162	Phe	GAA	agcaacggcc	gcttacgttt	0	0	84.19	62.58	21.61 Bo
chr15   	3184	102885295	102885223	Phe	GAA	gaggcgcagc	gctggttttt	0	0	84.19	62.58	21.61 Bo
chr17   	3805	51221008	51220936	Phe	GAA	ctagggtggg	gctattttct	0	0	84.19	62.58	21.61 Bo
chr7    	443	10971619	10971691	Phe	GAA	ccttcacgca	gaggttttta	0	0	84.19	62.58	21.61 Bo
--------------------------------------------------------------------------------------------------------------------------------
chr5    	3091	135471625	135471698	Pro	AGG	caggctaggg	gctaagagca	0	0	26.05	19.88	6.17 Bo
chr13   	5392	35613744	35613666	Pro	AGG	aattcagggg	aaagaaccaa	0	0	29.58	18.86	10.72 Bo
chr1    	1027	41278597	41278669	Pro	AGG	attctcgggg	aaaaagaacc	0	0	29.78	24.39	5.39 Bo
chr20   	3131	43820900	43820834	Pro	AGG	tgggggctgg	gaaaaaagaa	0	0	30.36	20.04	10.32 Bo
chr4    	8470	55986235	55986163	Pro	AGG	tggtttgggg	aaaaaaaaaa	0	0	31.02	20.44	10.58 Bo
chr3    	1932	57887574	57887646	Pro	AGG	agattcgggg	aaaaaaaaaa	0	0	31.73	24.87	6.86 Bo
chr11   	837	42643797	42643862	Pro	AGG	naggggctgg	naaaaaaaga	0	0	31.86	22.34	9.52 Bo
chr4    	7426	87162681	87162609	Pro	AGG	ggcacaaggg	ggaaaaaaaa	0	0	32.16	26.37	5.79 Bo
chr10   	1335	35149230	35149296	Pro	AGG	aaggggttga	aaaaaaagaa	0	0	32.91	26.36	6.55 Bo
chr4    	49	1398743	1398816	Pro	AGG	ccccatgggg	aaaagaaaaa	0	0	33.73	28.06	5.67 Bo
chr13   	524	38142932	38143004	Pro	AGG	cctgatggct	aaaacaggaa	0	0	36.43	20.12	16.31 Bo
chr11_random	64	909736 	909661 	Pro	AGG	agcatggggg	aaaaaaaaaa	0	0	37.13	27.66	9.47 Bo
chr4    	8927	27520572	27520500	Pro	AGG	gggctggggg	aaaaaaaaaa	0	0	37.95	25.98	11.97 Bo
chr7    	4908	141137290	141137362	Pro	AGG	gggggggggg	aaaaaaagan	0	0	39.20	22.70	16.50 Bo
chr19   	2303	53692070	53692138	Pro	AGG	ggatggggtt	gggaaaaaaa	0	0	54.77	48.82	5.95 Bo
chr11   	3745	46458349	46458281	Pro	AGG	tgggggggtt	aaaaaaaaaa	0	0	55.08	44.15	10.93 Eu
chr8    	5188	116458957	116458889	Pro	AGG	tctcggggtt	aaaaaaaaaa	0	0	55.08	44.15	10.93 Eu
chr17   	1527	46178129	46178197	Pro	AGG	aatgggggtt	aaaaaaaaaa	0	0	55.62	50.24	5.38 Eu
chr3    	9826	67131951	67131878	Pro	AGG	aaaggagagg	aaaaaaagaa	0	0	55.93	47.73	8.20 Eu
chr7    	3063	109136203	109136276	Pro	AGG	agaagtgggg	aaaaagaaaa	0	0	56.35	45.26	11.09 Eu
chr8    	5635	112614766	112614698	Pro	AGG	tgaaggggct	aaaaaaagga	0	0	57.30	50.15	7.15 Eu
chr5    	9777	136485721	136485653	Pro	AGG	aagtggggtt	aaaaaaagaa	0	0	58.59	46.58	12.01 Eu
chr2    	2630	140251677	140251748	Pro	AGG	agtcttacat	atctttagct	0	0	70.27	52.02	18.25 Bo
chr1    	12550	156101454	156101383	Pro	AGG	taccgccagt	agtcttttta	0	0	75.92	53.85	22.07 Bo
chr10   	12847	12794079	12794008	Pro	AGG	ctattggtgt	gcttagtatt	0	0	75.92	53.85	22.07 Bo
chr10   	12850	12789256	12789185	Pro	AGG	caatactcaa	tcctgttttt	0	0	75.92	53.85	22.07 Bo
chr13   	1964	81363747	81363818	Pro	AGG	gacgcacatc	aacttttaaa	0	0	75.92	53.85	22.07 Bo
chr15   	5101	27044632	27044561	Pro	AGG	gttacccggt	ttcattttgc	0	0	75.92	53.85	22.07 Bo
chr17   	1603	48888805	48888876	Pro	AGG	ctctctatct	aaattttaat	0	0	75.92	53.85	22.07 Bo
chr4    	1068	56269155	56269226	Pro	AGG	aattgccagt	tgttttatcc	0	0	75.92	53.85	22.07 Bo

chr10   	2457	55792684	55792755	Pro	CGG	gtcacacgtc	catattatct	0	0	76.52	54.46	22.06 Bo
chr10   	452	12797712	12797783	Pro	CGG	gtagctgtgt	tggagggggt	0	0	76.52	54.46	22.06 Bo
chr13   	3982	81364450	81364379	Pro	CGG	cgctgagagc	tggttttgtt	0	0	76.52	54.46	22.06 Bo

chr10   	12843	12812622	12812551	Pro	TGG	tcggcacagt	atctttttaa	0	0	76.15	54.09	22.06 Bo
chr10   	12846	12795177	12795106	Pro	TGG	gctgtgaact	ggtataaagg	0	0	76.15	54.09	22.06 Bo
chr10   	1313	34124422	34124493	Pro	TGG	catatcagct	aaatgtttta	0	0	76.15	54.09	22.06 Bo
chr15   	877	27073277	27073348	Pro	TGG	actgtgctat	tgcacttttt	0	0	76.15	54.09	22.06 Bo
chr2    	2629	140250690	140250761	Pro	TGG	tgtgctcagc	agctatttta	0	0	76.15	54.09	22.06 Bo
chr1    	4473	156100153	156100224	Pro	TGG	tttgatagct	ctcttttcct	0	0	76.24	54.23	22.01 Bo
--------------------------------------------------------------------------------------------------------------------------------
chr1    	1937	78664920	78665005	SeC(e)	TCA	agttgtctct	gggagtatct	0	0	75.67	0.00	0.00 Eu
--------------------------------------------------------------------------------------------------------------------------------
chr17   	3872	48948650	48948577	Ser	ACT	gcttatcagt	tatgtggggt	0	0	54.75	42.78	11.97 Bo

chr15   	956	27757248	27757329	Ser	AGA	aggtgtatat	ataaatatta	0	0	55.97	36.23	19.74 Eu
chr19   	4680	15809527	15809453	Ser	AGA	ggttttgggg	aaaagaaaaa	0	0	60.41	48.34	12.07 Eu
chr17   	1644	50249064	50249145	Ser	AGA	attatgtttt	ggtgttttct	0	0	73.86	51.16	22.70 Bo
chr17   	1586	48805255	48805336	Ser	AGA	tatagcactt	gctgtgggct	0	0	83.71	55.59	28.12 Bo
chr17   	1642	50238970	50239051	Ser	AGA	acctagttgt	ggctatttta	0	0	86.04	54.93	31.11 Bo
chr17   	3849	50257979	50257899	Ser	AGA	ttacttccat	acaatcttat	0	0	86.11	52.38	33.73 Bo
chr10   	2455	55789739	55789820	Ser	AGA	cagaagttct	tctaactttt	0	0	86.58	53.44	33.14 Bo
chr5    	491	24739429	24739510	Ser	AGA	agcatcacca	gtaagagaat	0	0	88.01	56.90	31.11 Bo

chr17   	1629	50134315	50134396	Ser	CGA	gctcgagtga	tatgagaggt	0	0	86.89	57.25	29.64 Bo
chr7    	9814	1742723	1742642	Ser	CGA	agttttggga	gtagctcttc	0	0	89.14	63.50	25.64 Bo
chr10   	2466	55870265	55870346	Ser	CGA	gccgcacgcg	ctagtagttt	0	0	92.58	63.39	29.19 Bo

chr17   	1661	50718562	50718643	Ser	GCT	gtttccatag	acttactatc	0	0	49.32	31.61	17.71 Bo
chr17   	1626	50094248	50094329	Ser	GCT	ggtatgcttt	gtctgccttt	0	0	64.42	45.01	19.41 Eu
chr1    	4976	169229620	169229701	Ser	GCT	gactgaggag	ttggccctta	0	0	67.60	46.64	20.96 Bo
chr4    	6999	108116609	108116528	Ser	GCT	gtttccacag	actgactatc	0	0	84.39	52.32	32.07 Bo
chr10   	10835	55817387	55817306	Ser	GCT	gggaggcatg	tgtgtagcat	0	0	85.34	57.77	27.57 Bo
chr17   	3899	48785806	48785725	Ser	GCT	gtgttgatgt	acgagttgtg	0	0	85.34	57.77	27.57 Bo
chr3    	8934	105553852	105553771	Ser	GCT	gagcttctgg	aaggtgtctt	0	0	85.34	57.77	27.57 Bo
chr1    	10567	207658551	207658470	Ser	GCT	tcctacgtgg	gtcctgtttt	0	0	85.83	58.25	27.58 Bo
chr17   	1635	50170397	50170478	Ser	GCT	gggcagggag	ttggtacctg	0	0	88.12	59.22	28.90 Bo

chr17   	3896	48789578	48789497	Ser	TGA	gctcattctt	tgcttatgtt	0	0	86.82	53.68	33.14 Bo
chr17   	1648	50260833	50260914	Ser	TGA	taagaaggag	gttttatcaa	0	0	87.08	55.97	31.11 Bo
chr11   	2441	85577256	85577175	Ser	TGA	gggggggggt	gtagctcttc	0	0	88.78	63.14	25.64 Bo
chr20   	3731	25800862	25800781	Ser	TGA	cttccccgta	gaagcgggtg	0	0	90.86	62.33	28.53 Bo
--------------------------------------------------------------------------------------------------------------------------------
chr17   	1627	50126024	50126097	Thr	AGT	tgtcagagga	ttagtgctgg	0	0	73.09	53.10	19.99 Bo
chr17   	1674	51137748	51137821	Thr	AGT	aatttgtaag	ctaggagact	0	0	78.34	58.00	20.34 Bo
chr10   	2465	55869773	55869846	Thr	AGT	tgtcgtcgtt	gatttgtgtg	0	0	79.86	60.26	19.60 Bo
chr17   	3843	50319139	50319066	Thr	AGT	cctcagttct	tttttttttt	0	0	81.31	61.75	19.56 Bo
chr17   	3878	48874434	48874361	Thr	AGT	aaagcgtgcc	ttttgtgttt	0	0	83.05	63.49	19.56 Bo
chr1    	14184	87750033	87749960	Thr	AGT	ccgtgcgggc	cacgctgagc	0	0	84.06	64.45	19.61 Bo
chr10   	10836	55817083	55817010	Thr	AGT	atgtcacgta	cgtggctttt	0	0	84.06	64.45	19.61 Bo
chr10   	2456	55790110	55790183	Thr	AGT	tcttggcatt	atgtgtaacc	0	0	84.06	64.45	19.61 Bo
chr12   	5597	21296802	21296680	Thr	AGT	ggaaggcgct	aatgaatgga	21296766	21296716	29.45	23.95	5.50 Bo

chr17   	3822	51122984	51122911	Thr	CGT	ccttccgggt	gagtaatggt	0	0	78.56	62.34	16.22 Bo
chr10   	3238	65894040	65894111	Thr	CGT	tcggctgtca	gcgtttggga	0	0	79.77	59.88	19.89 Bo
chr17   	3826	51055171	51055098	Thr	CGT	atcaccatgt	tctgttttca	0	0	80.32	60.39	19.93 Bo

chr10   	10906	55217260	55217188	Thr	TGT	ctcagtgact	acgagttact	0	0	74.17	51.73	22.44 Bo
chr15   	875	27071309	27071381	Thr	TGT	cggttcgtgt	aagtcaacgt	0	0	78.79	56.36	22.43 Bo
chr10   	1312	34121651	34121723	Thr	TGT	tttcgcgact	accagtaact	0	0	79.46	56.92	22.54 Bo
chr15   	5100	27044984	27044912	Thr	TGT	cacaggtgag	tcggttcttt	0	0	79.46	56.92	22.54 Bo
chr17   	3824	51105660	51105587	Thr	TGT	tgcagcagtt	gtctagctgc	0	0	85.34	65.41	19.93 Bo
--------------------------------------------------------------------------------------------------------------------------------
chr13   	4389	68984298	68984227	Trp	CCA	tctgcaggga	tctatctggg	0	0	62.05	50.98	11.07 Eu
chr7    	8814	28122548	28122477	Trp	CCA	agcccagcag	taagcttttt	0	0	71.65	49.85	21.80 Bo
chr17   	3891	48807784	48807713	Trp	CCA	tctttagggt	gtgttttata	0	0	72.12	51.78	20.34 Bo
chr17   	3892	48799640	48799569	Trp	CCA	ttaaggctgt	agagttttgg	0	0	74.00	52.21	21.79 Bo
chr10   	11179	47571719	47571648	Trp	CCA	agcctgctgt	agttaggttt	0	0	74.80	53.00	21.80 Bo
chr10   	10834	55817856	55817785	Trp	CCA	gtggccggcc	gctccttttt	0	0	74.81	54.94	19.87 Bo
chr10   	2459	55794240	55794311	Trp	CCA	gccagaggga	tctgctttat	0	0	74.81	54.94	19.87 Bo
chr10   	11017	48931291	48931220	Trp	CCA	ctgtatcagc	tgaatacctg	0	0	76.45	54.66	21.79 Bo
--------------------------------------------------------------------------------------------------------------------------------
chr2    	2055	104708864	104708957	Tyr	GTA	aactcatgtc	gacagtaatg	104708901	104708921	74.33	47.92	26.41 Bo
chr2    	2056	104709280	104709369	Tyr	GTA	cttgtcgctc	aagagcttgc	104709317	104709333	72.50	46.09	26.41 Bo
chr6    	7599	25474396	25474308	Tyr	GTA	agcagcggag	cttcgtgcac	25474359	25474344	77.37	50.96	26.41 Bo
chr15   	876	27072188	27072276	Tyr	GTA	cccgtgcttc	gtagcctgta	27072225	27072240	74.16	47.75	26.41 Bo
chr17   	1604	48892341	48892428	Tyr	GTA	gcacgtgtgt	acctatgttt	48892378	48892392	76.21	49.80	26.41 Bo
chr17   	1605	48898706	48898790	Tyr	GTA	tatatacctc	ggtgtctctt	48898743	48898754	77.12	50.71	26.41 Bo
chr17   	3876	48899103	48899019	Tyr	GTA	ttgacatctt	ataccctttt	48899066	48899055	75.85	49.44	26.41 Bo
chr17   	1606	48899937	48900020	Tyr	GTA	tagatggctt	gtggcctttt	48899974	48899984	76.05	49.64	26.41 Bo
--------------------------------------------------------------------------------------------------------------------------------
chr6    	7649	25178120	25178046	Undet	???	gacagcagtg	tgtggtggtt	0	0	23.05	16.07	6.98 Bo
chr2    	2985	158713926	158713999	Undet	???	aaataagggg	aaaaaagaaa	0	0	24.86	17.45	7.41 Bo
chr7    	3147	112934160	112934224	Undet	???	agagaggggt	aaaaaagaaa	0	0	28.84	19.74	9.10 Bo
--------------------------------------------------------------------------------------------------------------------------------
chr4    	8149	62516127	62516059	Unknown	AGN	tcttgggnnn	aaaaaaagaa	0	0	33.22	21.15	12.07 Bo

chr3    	11037	17612537	17612465	Unknown	ANC	tgctaagggg	aaaaaaaaaa	0	0	24.88	16.03	8.85 Bo

chrX    	1692	71935322	71935397	Unknown	ANG	gttcatcagg	aaaaanannn	0	0	25.08	11.34	13.74 Bo
--------------------------------------------------------------------------------------------------------------------------------
chr5    	7576	158232120	158232049	Val	AAC	aaagatggct	gaaaggaaac	0	0	55.85	47.67	8.18 Eu
chrUn   	552	41318563	41318635	Val	AAC	aatcccgggg	agaaaagaaa	0	0	57.86	34.79	23.07 Eu
chr17   	1607	48913124	48913196	Val	AAC	accaatggat	gtcttctttt	0	0	67.39	46.15	21.24 Bo
chr17   	1631	50140595	50140667	Val	AAC	cactaggggt	ctatgttttt	0	0	84.34	60.86	23.48 Bo
chr10   	1308	34091903	34091975	Val	AAC	acaagcgtgg	gcgcttaaat	0	0	86.79	61.60	25.19 Bo
chr10   	1314	34124789	34124861	Val	AAC	acagacatga	gaggttgcat	0	0	86.79	61.60	25.19 Bo
chr2    	9183	117216704	117216632	Val	AAC	aggcagccag	cgatttttat	0	0	86.79	61.60	25.19 Bo
chr3    	10806	31075136	31075064	Val	AAC	actcgcgtgg	gcgcttaaat	0	0	86.79	61.60	25.19 Bo

chr17   	3866	49029511	49029439	Val	CAC	tgcattgtac	gcacttgcta	0	0	59.14	42.75	16.39 Eu
chr17   	3867	49023090	49023018	Val	CAC	gctgtgggaa	gcaccaattt	0	0	63.04	48.99	14.05 Bo
chr17   	1610	48915813	48915885	Val	CAC	tacccgttgt	tctctatttt	0	0	85.55	61.04	24.51 Bo
chr17   	1600	48879492	48879564	Val	CAC	ccagtagcta	gcggtggttt	0	0	85.74	60.55	25.19 Bo
chr10   	1307	34085304	34085376	Val	CAC	aaacagtgcg	gttttagacc	0	0	87.39	62.20	25.19 Bo
chr13   	2189	86992747	86992819	Val	CAC	tagacagcta	gctacttcct	0	0	87.39	62.20	25.19 Bo
chr2    	4114	191150360	191150432	Val	CAC	ccaacaggca	cttggtctcc	0	0	87.39	62.20	25.19 Bo

chr6    	7279	36370036	36369964	Val	TAC	atttcagccc	cgtggtgtac	0	0	57.22	35.84	21.38 Ts
chrX    	4168	123657280	123657209	Val	TAC	agtgaggctt	agctttttgt	0	0	59.08	45.74	13.34 Eu
chrX    	2719	123840775	123840846	Val	TAC	agtgaggctt	agctttttgt	0	0	61.89	45.74	16.15 Eu
chr1    	6858	214863473	214863545	Val	TAC	gcacccgccc	cgtggtgtgc	0	0	82.67	57.63	25.04 Bo
chr1    	6859	214863813	214863885	Val	TAC	tgcagcacgt	ttggagattt	0	0	82.67	57.63	25.04 Bo

The Genomic tRNA Database is curated by Todd Lowe and Patricia Chan. Please email lowe@soe.ucsc.edu with any questions and comments. To submit corrections, please use our Bug and Request Tracking System.