GtRNAdb
>> tRNAscan-SE
>> Lowe Lab
 
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tRNAscan-SE Analysis of Populus trichocarpa (June 2004 Version 1.0)

>> Main Overview
>> tRNAs by Isotype
>> tRNAs by Locus
>> Secondary Structures
>> tRNA Alignments
>> FASTA Seqs
>> Run Options/Stats
>> Analysis Notes
>> Genome DB
>> Genome Seq
Structurally Aligned tRNAs (by Isotype & Anticodon)


Structural alignments are generated by aligning tRNA sequences against
domain-specific tRNA covariance models with the use of
COVE.




[Ala]
[Arg]
[Asn]
[Asp]
[Cys]
[Gln]
[Glu]
[Gly]
[His]
[Ile]
[Leu]
[Lys]
[Met]
[Phe]
[Pro]
[Ser]
[Thr]
[Trp]
[Tyr]
[Val]

[Suppressor]
[Selenocysteine]








Ala tRNAs




>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCACCTCCA scaffold13262.trna4-AlaAGC Sc: 68.73  
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA scaffold6371.trna1-AlaAGC Sc: 68.12  
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA scaffold29.trna4-AlaAGC Sc: 68.12  
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA scaffold133.trna3-AlaAGC Sc: 68.12  
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA scaffold12850.trna1-AlaAGC Sc: 68.12  
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA lgXVII.trna5-AlaAGC Sc: 68.12  
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA lgXVI.trna6-AlaAGC Sc: 68.12  
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA lgXVI.trna12-AlaAGC Sc: 68.12  
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA lgXVI.trna11-AlaAGC Sc: 68.12  
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA lgXIII.trna1-AlaAGC Sc: 68.12  
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA lgXI.trna10-AlaAGC Sc: 68.12  
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA lgVII.trna22-AlaAGC Sc: 68.12  
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA lgVII.trna16-AlaAGC Sc: 68.12  
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA lgVI.trna34-AlaAGC Sc: 68.12  
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA lgV.trna25-AlaAGC Sc: 68.12  
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA lgIII.trna34-AlaAGC Sc: 68.12  
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA lgIII.trna19-AlaAGC Sc: 68.12  
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA lgIII.trna11-AlaAGC Sc: 68.12  
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA lgIII.trna10-AlaAGC Sc: 68.12  
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA lgI.trna22-AlaAGC Sc: 68.12  
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA lgI.trna1-AlaAGC Sc: 68.12  
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCTGCATCTCCA lgXIII.trna9-AlaAGC Sc: 65.95  

>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>.>>>.......<<<.<<<<<<<<.
GGGGGTATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAG...........GtCATCGGTTCGATCCCGTTTACCTCCA scaffold2924.trna1-AlaGGC Sc: 60.65  

>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GGGGGTGTAGCTCATATGGTAGAGCGCTCGCTTCGCATGCGAGAG...........GcACGGGGTTCGATTCCCCGCACCTCCA lgXV.trna24-AlaCGC Sc: 65.14  
GGGGGTGTAGCTCATATGGTAGAGCGCTCGCTTCGCATGCGAGAG...........GcACGGGGTTCGATTCCCCGCACCTCCA lgXII.trna2-AlaCGC Sc: 65.14  
GGGGATGTAGCTCATATGGTAGAGCGCTCGCTTCGCATGCGAGAG...........GcACGGGGTTCGATTCCCCGCATCTCCA lgXIV.trna5-AlaCGC Sc: 64.52  
GGGGTTGTAGCTCATATGGTAGAGCGCTCGCTTCGCATGCGAGAG...........GcACGGGGTTCGATTCCCCGCAGCTCCA lgIII.trna13-AlaCGC Sc: 63.43  
GGGGTTGTAGCTCATATGGTAGAGCGCTCGCTTCGCATGCGAGAG...........GcACGGGGTTCGATTCCCCGCAGCTCCA lgI.trna55-AlaCGC Sc: 63.43  
GGGGGTGTAGCTCAAATGGTAGAGCGCTCGCTTCGCATGTGAGAG...........GcACGGGGATCGATACCCCGCACTTCCA scaffold20723.trna4-AlaCGC Sc: 56.20  

>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAG...........GtACAGGGTTCGATCCCCTGCATCTCCA scaffold836.trna1-AlaTGC Sc: 69.90  
GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAG...........GtACAGGGTTCGATCCCCTGCATCTCCA lgXVIII.trna7-AlaTGC Sc: 69.90  
GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAG...........GtACAGGGTTCGATCCCCTGCATCTCCA lgXIX.trna5-AlaTGC Sc: 69.90  
GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAG...........GtACAGGGTTCGATCCCCTGCATCTCCA lgXIII.trna8-AlaTGC Sc: 69.90  
GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAG...........GtACAGGGTTCGATCCCCTGCATCTCCA lgXIII.trna4-AlaTGC Sc: 69.90  
GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAG...........GtACAGGGTTCGATCCCCTGCATCTCCA lgIX.trna16-AlaTGC Sc: 69.90  
GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAG...........GtACAGGGTTCGATCCCCTGCATCTCCA lgIII.trna26-AlaTGC Sc: 69.90  
GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAG...........GcACGGGGTTCGATCCCCCGCATCTCCA scaffold13163.trna1-AlaTGC Sc: 66.31  
GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAG...........GcACGGGGTTCGATCCCCCGCATCTCCA lgXVI.trna5-AlaTGC Sc: 66.31  
GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAG...........GcACGGGGTTCGATCCCCCGCATCTCCA lgXIV.trna6-AlaTGC Sc: 66.31  
GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAG...........GcACGGGGTTCGATCCCCCGCATCTCCA lgVI.trna9-AlaTGC Sc: 66.31  
GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAG...........GcACGGGGTTCGATCCCCCGCATCTCCA lgIX.trna33-AlaTGC Sc: 66.31  
GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAG...........GcACGGGGTTCGATCCCCCGCATCTCCA lgII.trna26-AlaTGC Sc: 66.31  
GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAG...........GcACGGGGTTCGATCCCCCGCATCTCCA lgI.trna48-AlaTGC Sc: 66.31  
GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAG...........GcACGGGGTTCGATCCCCCGCATCTCCA lgI.trna47-AlaTGC Sc: 66.31  
GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAG...........GcACGGGGTTCGATCCCCCGCATCTCCA lgI.trna19-AlaTGC Sc: 66.31  
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>.>>>.......<<<.<<<<<<<<.
GGGGGATTAGCTCAGCTGGGAGAGCACCTGCTTTGCAAGCAGGGG...........GtCGTCGGTTCGATCCCGTCATCCTCCA scaffold7095.trna2-AlaTGC Sc: 65.43  
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GGGGGTGTAGCTCAGACGGTAGAGCGCTCGCTTTGCATGCGAGAG...........GcACGGGGATCGATACCCCGCACCTCCA scaffold20723.trna2-AlaTGC Sc: 64.23  
GGGGATGTAGCTCAAATAGTAGAGCGCTCGCTTTGCATGCGAGAG...........GtACAGGGTTCGATCCCCTGCATCTCCA lgVI.trna33-AlaTGC Sc: 61.98  
..>>>.>..>>>>........<<<<.>>>>>.......<<<<<................>>.>>.......<<.<<<.<<<...
GCGGACGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAG...........GtACAAGGTTAGATCCCCTGCATTCTAT scaffold70.trna4-AlaTGC Sc: 34.67  Pseudo
..>..>>..>>>>........<<<<.>>.>>.......<<.<<................>>>.>.......<.<<<<<..<...
CTAATTGTAGCTCAAATGGTAGAGCGCT.GCTTTGCATGCGAGAG...........GtACAGTGTTCGATCCCCTGCATCTCCA scaffold70.trna6-AlaTGC Sc: 28.86  Pseudo
CTAATTGTAGCTCAAATGGTAGAGCGCT.GCTTTGCATGCGAGAG...........GtACAGTGTTCGATCCCCTGCATCTCCA scaffold70.trna5-AlaTGC Sc: 28.86  Pseudo
CTAATTGTAGCTCAAATGGTAGAGCGCT.GCTTTGCATGCGAGAG...........GtACAGTGTTCGATCCCCTGCATCTCCA scaffold311.trna1-AlaTGC Sc: 28.86  Pseudo





Arg tRNAs




>>>>>>>..>>>.............<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GACTCCATGGCCCAAT.GGAt.A.AGGCGCTGGTCTACGAAACCAGAG...........AtTCTGGGTTCGATCCCCAGTGGAGTCG lgIX.trna15-ArgACG Sc: 75.05  
GACTCCGTGGCCCAAT.GGAt.A.AGGCGCTGGTCTACGGAACCAGAG...........AtTCTGGGTTCGATCCCCAGCGGAGTCG scaffold1646.trna1-ArgACG Sc: 74.06  
GACTCCGTGGCCCAAT.GGAt.A.AGGCGCTGGTCTACGGAACCAGAG...........AtTCTGGGTTCGATCCCCAGCGGAGTCG lgIV.trna8-ArgACG Sc: 74.06  
GACTCCATGGCCCAAT.GGAt.A.AGGCGCTGGTCTACGGAACCAGAG...........AtTCTGGGTTCGATCCCCAGTGGAGTCG scaffold193.trna1-ArgACG Sc: 73.66  
GACTCCATGGCCCAAT.GGAt.A.AGGCGCTGGTCTACGGAACCAGAG...........AtTCTGGGTTCGATCCCCAGTGGAGTCG lgX.trna32-ArgACG Sc: 73.66  
GACTCCATGGCCCAAT.GGAt.A.AGGCGCTGGTCTACGGAACCAGAG...........AtTCTGGGTTCGATCCCCAGTGGAGTCG lgVIII.trna16-ArgACG Sc: 73.66  
GACTCCATGGCCCAAT.GGAt.A.AGGCGCTGGTCTACGGAACCAGAG...........AtTCTGGGTTCGATCCCCAGTGGAGTCG lgV.trna2-ArgACG Sc: 73.66  
GACTCCATGGCCCAAT.GGAt.A.AGGCGCTGGTCTACGGAACCAGAG...........AtTCTGGGTTCGATCCCCAGTGGAGTCG lgIII.trna18-ArgACG Sc: 73.66  
GGTCCTGTGGCGCAAC.GGAt.A.ACGCGTCTGACTACGGATCAGAAG...........AtTCCAGGTTCGAATCCTGGCAGGATCG scaffold13262.trna1-ArgACG Sc: 73.61  
>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GCGGCTGTAGCTCAGTTGGAt.A.GAGTACTTGGCTACGAACCAAGGG...........GtCGTGGGTTCGAATCCTGCCAGCCGCG scaffold18487.trna1-ArgACG Sc: 73.21  
>>>>>>>..>>>.............<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GACTCCATGGCCCAAT.GGAt.A.AGGTGCTGGTCTACGGAACCAGAG...........AtTCTGGGTTCGATCCCCAGTGGAGTCG lgI.trna59-ArgACG Sc: 72.19  
>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GCGGCTGTAGCTCAGCTGGAt.A.GAGTACTTGGCTACGAACCAAGGG...........GtCGTGGGTTCGATTCCTGCCAGCCGCA scaffold14734.trna2-ArgACG Sc: 71.00  
GCGGCTGTAGCTCAGCTGGAt.A.GAGTACTTGGCTACGAACCAAGGG...........GtCGTGGGTTCGATTCCTGCCAGCCGCA scaffold14734.trna1-ArgACG Sc: 71.00  
GCGGCTGTAGCTCAGCTGGAt.A.GAGTACTTGGCTACGAACCAAGGG...........GtCGTGGGTTCGATTCCTGCCAGCCGCA scaffold11359.trna1-ArgACG Sc: 71.00  
>>>.>>>..>>>.............<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<.<<<.
GTCCCCGTGGCCCAAT.GGAt.A.AGGCATCCGCCTACGAAGCGGGAG...........AtTGCGGGTTCGAGTCCCGTCGGAGACT scaffold19297.trna2-ArgACG Sc: 65.99  
GTCCCCGTGGCCCAAT.GGAt.A.AGGCATCCGCCTACGAAGCGGGAG...........AtTGCGGGTTCGAGTCCCGTCGGAGACT scaffold19297.trna1-ArgACG Sc: 65.99  
>>>>..>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<..<<<<.
GGGCCTGTAGCTCAGA.GGAttA.GAGCACGTGGCTACGAACCACGGT...........GtCGGGGGTTCGAATCCCTCCTCGCCCA scaffold16867.trna1-ArgACG Sc: 61.16  
GGGCCTGTAGCTCAGA.GGAttA.GAGCACGTGGCTACGAACCACGGT...........GtCGGGGGTTCGAATCCCTCCTCGCCCA scaffold14076.trna1-ArgACG Sc: 61.16  
>>.>..>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<..<.<<.
GGCCCTGTAGCTCAGA.GGAttA.GAGCACGTGGCTACGAACCACGGT...........GtCGGGGGTTCGAATCCCTCCTCGCCCA scaffold16838.trna1-ArgACG Sc: 56.41  
>>>>..>..>>>>...........<<<<.>>>>>.......<<<<<.................>>>.........<<<.<..<<<<.
GGGCCTGTAGCTCAGA.GGAttA.GAGCACGTGGCTACGAACCATGGT...........GtCAAGGCTTCGAATCCCTCCTCGCCCA scaffold173.trna1-ArgACG Sc: 44.58  
>>>>.....>>>>...........<<<<.>.>.>.......<.<.<.................>>>>.......<<<<....<<<<.
GGGCTTTTAGCTTAGAGGGTt.A.GAGTATATAGCTACGAACCACGAT...........GtCAGGGGTTCGAATCCCTCCTCGCCCA lgII.trna35-ArgACG Sc: 33.94  Pseudo
>>>......>>>>...........<<<<.>>>>>.......<<<<<................>>.>>.......<<.<<....<<<.
GGGGTTATAGCTCAGA.AGAttA.GAGCATGTGGTTACGAACCACGAT...........GtGGGGGGTTCGAATCCATCCTTGCCCA lgIX.trna25-ArgACG Sc: 28.23  Pseudo


>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GATCGCATAGCGGAGT.GGAt.A.TCGCGTTAGACTCCGAATCTAAAG...........GtCGTGGGTTCGAATCCCACTGCGATCG lgVIII.trna5-ArgCCG Sc: 83.85  
GCGGCTGTAGCTCAGT.GGAt.A.GAGTATTGGCCTCCGAAGCCAAGG...........GtCGTGGGTTCGATCCCCGCCAGCCGCA scaffold11214.trna1-ArgCCG Sc: 79.42  
GATCGCGTGGCCTAAT.GGAt.A.AGGCGCTCGCCTCCGGAGCGGGAG...........AtTGTGGGTTCGAGTCCCACCGTGATCG lgVI.trna18-ArgCCG Sc: 70.60  
GATCGCGTGGCCTAAT.GGAt.A.AGGCGCTCGCCTCCGGAGCGGGAG...........AtTGTGGGTTCGAGTCCCATCGCGATCG lgVII.trna11-ArgCCG Sc: 69.19  
GATCGCGTGGCCTAAT.GGAt.A.AGGCGCTCGCCTCCGGAGCGGGAG...........AtTGTGGGTTCGAGTCCCATCGCGATCG lgV.trna21-ArgCCG Sc: 69.19  
>>>..>>..>>.>...........<.<<.>>>.>.......<.<<<................>>>>>.......<<<<<<<..<<<.
GATCTCATAGCGGAGT.GGAt.A.TGGCGTTAGACTCCGGATATAAAG...........GtCGTGGGTTCGAATCCCACTGCTATCG lgX.trna27-ArgCCG Sc: 58.09  
>>.>>>...>>>>...........<<<<.>>>>.........<<<<................>>.>>.......<<.<<.<<<.<<.
GGTTCCATGGCGCAAT.GGT..A.GCGCGTCTGTCTCCGGTTCAGAAG...........GtTGCATGTTCTATTCACGTCGGGTTCA scaffold40.trna1-ArgCCG Sc: 46.12  Pseudo

>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GACCGCATAGCGCAGT.GGAttA.GCGCGTTTGACTTCGGATCAAAAG...........GtCGTGGGTTCGACTCCCACTGTGGTCG scaffold17779.trna1-ArgTCG Sc: 82.11  
GACCGCATAGCGCAGT.GGAttA.GCGCGTTTGACTTCGGATCAAAAG...........GtCGTGGGTTCGACTCCCACTGTGGTCG scaffold152.trna2-ArgTCG Sc: 82.11  
GACCGCATAGCGCAGT.GGAttA.GCGCGTTTGACTTCGGATCAAAAG...........GtCGTGGGTTCGACTCCCACTGTGGTCG lgX.trna23-ArgTCG Sc: 82.11  
GACCGCATAGCGCAGT.GGAttA.GCGCGTTTGACTTCGGATCAAAAG...........GtCGTGGGTTCGACTCCCACTGTGGTCG lgVIII.trna1-ArgTCG Sc: 82.11  
GACCGCATAGCGCAGT.GGAttA.GCGCGTTTGACTTCGGATCAAAAG...........GtCGTGGGTTCGACTCCCACTGTGGTCG lgVI.trna25-ArgTCG Sc: 82.11  
GACCGCATAGCGCAGT.GGAttA.GCGCGTTTGACTTCGGATCAAAAG...........GtCGTGGGTTCGACTCCCACTGTGGTCG lgIX.trna17-ArgTCG Sc: 82.11  
GACCGCATAGCGCAGT.GGAttA.GCGCGTTTGACTTCGGATCAAAAG...........GtCGTGGGTTCGACTCCCACTGTGGTCG lgI.trna49-ArgTCG Sc: 82.11  
GACCGCATAGCGCAGT.GGAttA.GCGCGTCTGACTTCGGATCAGAAG...........GtCGTGGGTTCGACTCCCACTGTGGTCG scaffold163.trna3-ArgTCG Sc: 81.86  
GACCGCATAGCGCAGT.GGAttA.GCGCGTCTGACTTCGGATCAGAAG...........GtCGTGGGTTCGACTCCCACTGTGGTCG scaffold163.trna2-ArgTCG Sc: 81.86  

>>>>>.>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<.<<<<<.
GCGCCTGTAGCTCAGT.GGAt.A.GAGCGTCTGTTTCCTAAGCAGAAG...........GtCATAGGTTCGACCCCTATCTGGCGCG lgXVIII.trna15-ArgCCT Sc: 74.13  
GCGCCTGTAGCTCAGT.GGAt.A.GAGCGTCTGTTTCCTAAGCAGAAG...........GtCATAGGTTCGACCCCTATCTGGCGCG lgXVIII.trna14-ArgCCT Sc: 74.13  
GCGCCTGTAGCTCAGT.GGAt.A.GAGCGTCTGTTTCCTAAGCAGAAG...........GtCATAGGTTCGACCCCTATCTGGCGCG lgVI.trna22-ArgCCT Sc: 74.13  
GCGCCTGTAGCTCAGT.GGAt.A.GAGCGTCTGTTTCCTAAGCAGAAA...........GtCGTAGGTTCGACCCCTACCTGGCGCG scaffold130.trna3-ArgCCT Sc: 72.63  
GCGCCTGTAGCTCAGT.GGAt.A.GAGCGTCTGTTTCCTAAGCAGAAA...........GtCGTAGGTTCGACCCCTACCTGGCGCG lgVI.trna15-ArgCCT Sc: 72.63  
GCGCCTGTAGCTCAGT.GGAt.A.GAGCGTCTGTTTCCTAAGCAGAAA...........GtCGTAGGTTCGACCCCTACCTGGCGCG lgIX.trna10-ArgCCT Sc: 72.63  
GCGCCTGTAGCTCAGT.GGAt.A.GAGCGTCTGTTTCCTAAGCAGAAA...........GtCGTAGGTTCGACCCCTACCTGGCGCG lgIII.trna39-ArgCCT Sc: 72.63  
GCGTCTGTAGCTCAGT.GGAt.A.GAGCGTCTGTTTCCTAAGCAGAAA...........GtCGTAGGTTCGACCCCTACCTGACGCG scaffold40.trna2-ArgCCT Sc: 72.14  
GCGTCTGTAGCTCAGT.GGAt.A.GAGCGTCTGTTTCCTAAGCAGAAA...........GtCGTAGGTTCGACCCCTACCTGACGCG lgII.trna12-ArgCCT Sc: 72.14  
GCGCCTGTAGCTCAGT.GGAt.A.GAGCGTCTGTTTCCTAAGCAGAAA...........GtCATAGGTTCGACCCCTATCTGGCGCG lgXV.trna19-ArgCCT Sc: 70.50  
GCGCCTGTAGCTCAGT.GGAt.A.GAGCGTCTGTTTCCTAAGCAGAAA...........GtCATAGGTTCGACCCCTATCTGGCGCG lgXII.trna19-ArgCCT Sc: 70.50  

>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GCGCCCATGGCCTAAT.GGAt.A.AGGCGCTTGACTTCTAATCAAGCG...........AtTGTGGGTTCGAGTCCCACTGGGCGTG lgIII.trna5-ArgTCT Sc: 73.60  
GCGCCCATGGCCTAAT.GGAt.A.AGGCGCTTGACTTCTAATCAAGCG...........AtTGTGGGTTCGAGTCCCACTGGGCGTG lgI.trna13-ArgTCT Sc: 73.60  
CTGCCCGTAGCTCAACCGGAt.A.GAGCAATTGCCTTCTAAGCAATAG...........GtCGGGGGTTCGAGTCCCTCCGGGCAGG scaffold7924.trna1-ArgTCT Sc: 72.44  
GCGCTCGTGGCCTAAT.GGAt.A.AGGCGTCTGACTTCTAATCAGACG...........AtTGTGGGTTCGAGTCCCACCGAGCGTG scaffold515.trna1-ArgTCT Sc: 71.91  
GCGCTCGTGGCCTAAT.GGAt.A.AGGCGTCTGACTTCTAATCAGACG...........AtTGTGGGTTCGAGTCCCACCGAGCGTG scaffold287.trna1-ArgTCT Sc: 71.91  
GCGCTCGTGGCCTAAT.GGAt.A.AGGCGTCTGACTTCTAATCAGACG...........AtTGTGGGTTCGAGTCCCACCGAGCGTG scaffold10675.trna1-ArgTCT Sc: 71.91  
GCGCTCGTGGCCTAAT.GGAt.A.AGGCGTCTGACTTCTAATCAGACG...........AtTGTGGGTTCGAGTCCCACCGAGCGTG lgII.trna22-ArgTCT Sc: 71.91  
GCGCCCATGGCCTAAT.GGAt.A.AGGCGTCTGACTTCTAATCAGGCG...........AtTGTGGGTTCGAGTCCCACTGGGCGTG lgII.trna38-ArgTCT Sc: 70.00  
GCGCCCGTGGCCTAAT.GGAt.A.AGGCGTCTGACTTCTAATCAGGCG...........AcTGTGGGTTCGAATCCCACCGGGCGTG lgIX.trna11-ArgTCT Sc: 67.95  
GCGCCCGTGGCCTAAT.GGAt.A.AGGCGTCTGACTTCTAATCAGGCG...........AcTGTGGGTTCGAGTCCCACCGGGCGTG scaffold130.trna4-ArgTCT Sc: 66.30  
GCGCCCGTGGCCTAAT.GGAt.A.AGGCGTCTGACTTCTAATCAGGCG...........AcTGTGGGTTCGAGTCCCACCGGGCGTG scaffold121.trna1-ArgTCT Sc: 66.30  
GCGCCCGTGGCCTAAT.GGAt.A.AGGCGTCTGACTTCTAATCAGGCG...........AcTGTGGGTTCGAGTCCCACCGGGCGTG lgVI.trna3-ArgTCT Sc: 66.30  
GTACCCGTGGCCTAAT.GGAt.A.AGGCGTCTGACTTCTAATCAGGCG...........AcTGTGGGTTCGAGTCCCACCGGGTATG lgXIV.trna11-ArgTCT Sc: 64.86  





Asn tRNAs





>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GCCTCCGTGGCGCAAT.GGTtA.GCGCGTTCGGCTGTTAACCGAAAG...........GtTGGTGGTTCGACCCCACCCGGGGGCG scaffold15635.trna2-AsnGTT Sc: 83.95  
GCTGGAATAGCTCAGTTGGTtA.GAGCGTGTGGCTGTTAACCACAAG...........GtCGGAGGTTCAAGCCCTCCTTCTAGCG scaffold193.trna3-AsnGTT Sc: 81.83  
GCTGGAATAGCTCAGTTGGTtA.GAGCGTGTGGCTGTTAACCACAAG...........GtCGGAGGTTCAAGCCCTCCTTCTAGCG scaffold193.trna2-AsnGTT Sc: 81.83  
GCTGGAATAGCTCAGTTGGTtA.GAGCGTGTGGCTGTTAACCACAAG...........GtCGGAGGTTCAAGCCCTCCTTCTAGCG lgXVIII.trna6-AsnGTT Sc: 81.83  
GCTGGAATAGCTCAGTTGGTtA.GAGCGTGTGGCTGTTAACCACAAG...........GtCGGAGGTTCAAGCCCTCCTTCTAGCG lgXII.trna28-AsnGTT Sc: 81.83  
GCTGGAATAGCTCAGTTGGTtA.GAGCGTGTGGCTGTTAACCACAAG...........GtCGGAGGTTCAAGCCCTCCTTCTAGCG lgIV.trna19-AsnGTT Sc: 81.83  
GCTGGAGTAGCTCAGTTGGTtA.GAGCGTGTGGCTGTTAACCACAAG...........GtCGAAGGTTCAAGCCCTTCCTCTAGCG lgI.trna51-AsnGTT Sc: 81.73  
GCTGGAATAGCTCAGTTGGTtA.GAGCGTGTGGCTGTTAACCACAAG...........GtCGAAGGTTCAAGCCCTTCTTCTAGCG lgIX.trna45-AsnGTT Sc: 81.33  
GCTGGAGTAGCTCAGTTGGTtA.GAGCGTATGGCTGTTAACCATAAG...........GtCGGAGGTTCGACCCCTTCCTCTAGCG lgIII.trna8-AsnGTT Sc: 81.02  
GCTGGAGTAGCTCAGTTGGTtA.GAGCGTGTGGCTGTTAACCACAAG...........GtCGAAGGTTCAACCCCTTCCTCTAGCG scaffold9277.trna1-AsnGTT Sc: 80.45  
GCTGGAGTAGCTCAGTTGGTtA.GAGCGTGTGGCTGTTAACCACAAG...........GtCGAAGGTTCAACCCCTTCCTCTAGCG lgVIII.trna24-AsnGTT Sc: 80.45  
GCTGGAGTAGCTCAGTTGGTtA.GAGCGTGTGGCTGTTAACCACAAG...........GtCGAAGGTTCAAGCCCTTCTTCTAGCG lgIX.trna43-AsnGTT Sc: 78.10  
GCTGGAGTAGCTCAGTTGGTtA.GAGCGTGTGGCTGTTAACCACAAG...........GtCGAAGGTTCAAGCCCTTCTTCTAGCG lgIV.trna12-AsnGTT Sc: 78.10  
GCTGGAATAGCTCAGTTGGCtA.GAGCGTGTGGCTGTTAACCACAAG...........GtCGGAGGTTCAAGCCCTCCTTCTAGCG scaffold66.trna1-AsnGTT Sc: 77.92  
GCTGGAATAGCTCAGTTGGCtA.GAGCGTGTGGCTGTTAACCACAAG...........GtCGGAGGTTCAAGCCCTCCTTCTAGCG lgXV.trna22-AsnGTT Sc: 77.92  
GCTGGAATAGCTCAGTTGGCtA.GAGCGTGTGGCTGTTAACCACAAG...........GtCGGAGGTTCAAGCCCTCCTTCTAGCG lgVIII.trna30-AsnGTT Sc: 77.92  
GCTGGAATAGCTCAGTTGGCtA.GAGCGTGTGGCTGTTAACCACAAG...........GtCGGAGGTTCAAGCCCTCCTTCTAGCG lgVIII.trna26-AsnGTT Sc: 77.92  
GCTGGAATAGCTCAGTTGGCtA.GAGCGTGTGGCTGTTAACCACAAG...........GtCGGAGGTTCAAGCCCTCCTTCTAGCG lgIX.trna48-AsnGTT Sc: 77.92  
GCTGGAATAGCTCAGTTGGCtA.GAGCGTGTGGCTGTTAACCACAAG...........GtCGGAGGTTCAAGCCCTCCTTCTAGCG lgII.trna21-AsnGTT Sc: 77.92  
GCTGGAATAGCTCAGTTGGCtA.GAGCGTGTGGCTGTTAACCACAAG...........GtCGGAGGTTCAAGCCCTCCTTCTAGCG lgI.trna60-AsnGTT Sc: 77.92  
TCCTCAGTAGCTCAGT.GGT.A.GAGCGGTCGGCTGTTAACTGACTG...........GtCGTAGGTTCGAATCCTACTTGGGGAG scaffold3446.trna1-AsnGTT Sc: 77.16  
TCCTCAGTAGCTCAGT.GGT.A.GAGCGGTCGGCTGTTAACTGACTG...........GtCGTAGGTTCGAATCCTACTTGGGGAG scaffold3365.trna1-AsnGTT Sc: 77.16  
TCCTCAGTAGCTCAGT.GGT.A.GAGCGGTCGGCTGTTAACTGACTG...........GtCGTAGGTTCGAATCCTACTTGGGGAG scaffold21726.trna1-AsnGTT Sc: 77.16  
TCCTCAGTAGCTCAGT.GGT.A.GAGCGGTCGGCTGTTAACTGACTG...........GtCGTAGGTTCGAATCCTACTTGGGGAG scaffold16361.trna1-AsnGTT Sc: 77.16  
TCCTCAGTAGCTCAGT.GGT.A.GAGCGGTCGGCTGTTAACTGACTG...........GtCGTAGGTTCGAATCCTACTTGGGGAG scaffold12244.trna1-AsnGTT Sc: 77.16  
TCCTCAGTAGCTCAGT.GGT.A.GAGCGGTCGGCTGTTAACTGACTG...........GtCGTAGGTTCGAATCCTACTTGGGGAG scaffold12093.trna1-AsnGTT Sc: 77.16  
TCCTCAGTAGCTCAGT.GGT.A.GAGCGGTCGGCTGTTAACTGACTG...........GtCGTAGGTTCGAATCCTACTTGGGGAG lgVIII.trna15-AsnGTT Sc: 77.16  
GCTGGAGTAGCTCAGTTGGCtA.GAGCGTGTGGCTGTTAACCACAAG...........GtCGGAGGTTCAAGCCCTCCTTCTAGCG lgX.trna7-AsnGTT Sc: 74.69  
.>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<.................>>>>.......<<<<.<<<<<<..
TCCTCAGTAGCTCAGT.GGT.A.GAGCGGTCGGCTGTTAACTGACTA...........GtCATAGGTTCAAATCCTACTTGGGGTA scaffold169.trna1-AsnGTT Sc: 60.64  
>>.>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<.<<.
TCCTCAGTAGCTCAGC.GGT.A.GAGCGGTCGGCTGTTAACTGACTG...........GtCGTAGGTTCGCATCCTACTTGGAGAG lgI.trna10-AsnGTT Sc: 59.72  
.>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>.>.......<.<<<<<<<<<..
TCCTCAGTAGCTCAGT.GGT.A.GAGCGGTCGGCAGTTAACTGACTG...........GtCGTAGGTTCGAATCATACTTGGGGTG scaffold3153.trna1-AsnGTT Sc: 57.61  
>>>>>>>...>>............<<..>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GGCATCATGTCAGAGT.GGTtA.ATGTGAGGTACTGTTAATACCTTT...........TtCAGGGGTTCAATTCCTCTTGGTGCCT scaffold10589.trna1-AsnGTT Sc: 47.62  
>>>>>>>..>>>............<<<...>>>.......<<<...................>>>.........<<<.<<<<<<<.
GCTGGAGTAGCTAAGTTGGTtA.GAGCGCATGGTTGTTAACCGAAAG...........GcCGAAGGCTCAAACACTTGCTCTAGCG lgII.trna5-AsnGTT Sc: 32.77  Pseudo
>>>>>>>..>..>..........<..<.>>>>>.......<<<<<................>>>.>.......<.<<<<<<<<<<.
GTTGGAGTAGCTCAGCTAGTtA.GTCCGTGTGGCTGTTAATCATAAG...........CtTGAAAGTTCAAACCCTTCCTCTAGCT lgI.trna30-AsnGTT Sc: 28.58  Pseudo





Asp tRNAs





>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GGAGTGGTAGTTCAGTTGGTtA.GAATACCGGCCTGTCACGCCGGGG...........GtCGCGGGTTCGAGTCCCGTCCACTCCG scaffold2924.trna3-AspGTC Sc: 80.86  
TCCTCGGTAGTATAGT.GGTcA.GTATCCCCGCCTGTCACGCGGGAG...........A.CCGGGGTTCGATTCCCCGCCGGGGAG scaffold5338.trna1-AspGTC Sc: 75.39  
TCCTCGGTAGTATAGT.GGTcA.GTATCTTCGCCTGTCACGCGAGAG...........A.CCGGGGTTCGATTCCCCGCCGGGGAG scaffold20723.trna5-AspGTC Sc: 72.30  
GTCGTTGTAGTATAGT.GGTgA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG scaffold88.trna2-AspGTC Sc: 70.78  
GTCGTTGTAGTATAGT.GGTgA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG scaffold57.trna2-AspGTC Sc: 70.78  
GTCGTTGTAGTATAGT.GGTgA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG scaffold200.trna3-AspGTC Sc: 70.78  
GTCGTTGTAGTATAGT.GGTgA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG scaffold200.trna2-AspGTC Sc: 70.78  
GTCGTTGTAGTATAGT.GGTgA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG scaffold124.trna4-AspGTC Sc: 70.78  
GTCGTTGTAGTATAGT.GGTgA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG scaffold124.trna3-AspGTC Sc: 70.78  
GTCGTTGTAGTATAGT.GGTgA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG lgXI.trna21-AspGTC Sc: 70.78  
GTCGTTGTAGTATAGT.GGTgA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG lgX.trna14-AspGTC Sc: 70.78  
GTCGTTGTAGTATAGT.GGTgA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG lgX.trna10-AspGTC Sc: 70.78  
GTCGTTGTAGTATAGT.GGTgA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG lgVIII.trna28-AspGTC Sc: 70.78  
GTCGTTGTAGTATAGT.GGTgA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG lgVI.trna30-AspGTC Sc: 70.78  
GTCGTTGTAGTATAGT.GGTgA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG lgV.trna15-AspGTC Sc: 70.78  
GTCGTTGTAGTATAGT.GGTgA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG lgV.trna14-AspGTC Sc: 70.78  
GTCGTTGTAGTATAGT.GGTgA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG lgV.trna13-AspGTC Sc: 70.78  
GTCGTTGTAGTATAGT.GGTgA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG lgIV.trna22-AspGTC Sc: 70.78  
GTCGTTGTAGTATAGT.GGTgA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG lgIV.trna2-AspGTC Sc: 70.78  
GTCGTTGTAGTATAGT.GGTgA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG lgIV.trna1-AspGTC Sc: 70.78  
GTCGTTGTAGTATAGT.GGTgA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG lgIII.trna7-AspGTC Sc: 70.78  
GTCGTTGTAGTATAGT.GGTgA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG lgII.trna2-AspGTC Sc: 70.78  
GTCGTTGTAGTATAGT.GGTgA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG lgI.trna35-AspGTC Sc: 70.78  
GTCGTTGTAGTATAGT.GGTaA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG scaffold18127.trna1-AspGTC Sc: 69.46  
GTCGTTGTAGTATAGT.GGTaA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG scaffold1700.trna1-AspGTC Sc: 69.46  
GTCGTTGTAGTATAGT.GGTaA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG lgXV.trna15-AspGTC Sc: 69.46  
GTCGTTGTAGTATAGT.GGTaA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG lgXII.trna27-AspGTC Sc: 69.46  
GTCGTTGTAGTATAGT.GGTaA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG lgXII.trna15-AspGTC Sc: 69.46  
GTCGTTGTAGTATAGT.GGTaA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG lgXI.trna22-AspGTC Sc: 69.46  
GTCGTTGTAGTATAGT.GGTaA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG lgVIII.trna34-AspGTC Sc: 69.46  
GTCGTTGTAGTATAGT.GGTaA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG lgVII.trna3-AspGTC Sc: 69.46  
GTCGTTGTAGTATAGT.GGTaA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG lgVI.trna13-AspGTC Sc: 69.46  
GTCGTTGTAGTATAGT.GGTaA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG lgIII.trna31-AspGTC Sc: 69.46  
GTCGTTGTAGTATAGT.GGTaA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAGCGGCA lgIV.trna3-AspGTC Sc: 68.75  
GGGATTGTAGTTCAATCGGTcA.GAGCACCGCCCTGTCAAGGCGGAA...........GcTGCGGGTTCGAGCCCCGTCAGTCCCG scaffold666.trna1-AspGTC Sc: 60.73  
GGGATTGTAGTTCAATCGGTcA.GAGCACCGCCCTGTCAAGGCGGAA...........GcTGCGGGTTCGAGCCCCGTCAGTCCCG scaffold626.trna1-AspGTC Sc: 60.73  
GGGATTGTAGTTTAATTGGTcA.GAGCACCGCCCTGTCAAGGCGGAA...........GcTGCGGGTTCGAGCCTTGTCAGTCCCG lgVII.trna20-AspGTC Sc: 47.56  
>>>>>>>..>>>>..........<<<<.>>.>>.......<<.<<................>>..>.......<..<<<<<<<<<.
GGGATTGTAGTTCAATTGGTcA.GAGCACCACCCTGTCAAGGCGGAA...........GcTGCATGTTCGAGCCCCGTCAGTCCCG scaffold11540.trna1-AspGTC Sc: 41.63  Pseudo





Cys tRNAs





>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<.
GGGTCCATAGCTCAGTGGTA.GAGCAATTGACTGCAGATCAATAG...........GtCACCGGTTCGAACCCGGT.TGGGCCCT lgIX.trna26-CysGCA Sc: 79.11  
GGGTCCATAGCTCAGTGGTA.GAGCATTTGACTGCAGATCAAGAG...........GtCACCGGTTCGAACCCGGT.TGGGCCCT scaffold133.trna1-CysGCA Sc: 78.18  
GGGTCCATAGCTCAGTGGTA.GAGCATTTGACTGCAGATCAAGAG...........GtCACCGGTTCGAACCCGGT.TGGGCCCT lgXIV.trna17-CysGCA Sc: 78.18  
GGGTCCATAGCTCAGTGGTA.GAGCATTTGACTGCAGATCAAGAG...........GtCACCGGTTCGAACCCGGT.TGGGCCCT lgXIII.trna19-CysGCA Sc: 78.18  
GGGTCCATAGCTCAGTGGTA.GAGCATTTGACTGCAGATCAAGAG...........GtCACCGGTTCGAACCCGGT.TGGGCCCT lgVI.trna8-CysGCA Sc: 78.18  
GGGTCCATAGCTCAGTGGTA.GAGCATTTGACTGCAGATCAAGAG...........GtCACCGGTTCGAACCCGGT.TGGGCCCT lgIII.trna32-CysGCA Sc: 78.18  
GGGTCCATAGCTCAGTGGTA.GAGCATTTGACTGCAGATCAAGAG...........GtCACCGGTTCGAACCCGGT.TGGGCCCT lgII.trna27-CysGCA Sc: 78.18  
GGGTCCTTAGCTCAGTGGTA.GAGCATTTGACTGCAGATCAAGAG...........GtCACCGGTTCGAACCCGGT.AGGGCCCT scaffold152.trna1-CysGCA Sc: 77.60  
GGGTCCTTAGCTCAGTGGTA.GAGCATTTGACTGCAGATCAAGAG...........GtCACCGGTTCGAACCCGGT.AGGGCCCT lgXVI.trna22-CysGCA Sc: 77.60  
GGGTCCTTAGCTCAGTGGTA.GAGCATTTGACTGCAGATCAAGAG...........GtCACCGGTTCGAACCCGGT.AGGGCCCT lgIX.trna24-CysGCA Sc: 77.60  
GGGTCCTTAGCTCAGTGGTA.GAGCATTTGACTGCAGATCAAGAG...........GtCACCGGTTCGAACCCGGT.AGGGCCCT lgI.trna52-CysGCA Sc: 77.60  
GGGGGTATAGCTCAGTGGTA.GAGCATTCGACTGCAGATCGAGAG...........GtCCCCGGTTCAAACCCGGG.TGCCCCCT scaffold13262.trna2-CysGCA Sc: 76.52  
>>>>>>>..>>>..........<<<.>>>>>.......<<<<<................>>>.>.......<.<<<.<<<<<<<.
GGCGACATGGCCGAGTGGTA.AGGCGGGGGACTGCAAATCCTTT............TtTCCTAGTTCAAATCCGGG.TGTCGCCT scaffold15198.trna1-CysGCA Sc: 58.88  
>>>>>>>..>>>>........<<<<.>.>>>.......<<<.<................>>>>>.......<<<<<.<<<<<<<.
GGCTAGGTAACATAATGGAA.ATGTATCGGACTGCAAATCCTGGA...........A.TGACGGTTCGACCCCGTC.CTTGGCCT scaffold19948.trna1-CysGCA Sc: 40.08  
GGCTAGGTAACATAATGGAA.ATGTATCGGACTGCAAATCCTGGA...........A.TGACGGTTCGACCCCGTC.CTTGGCCT lgXIV.trna4-CysGCA Sc: 40.08  
>..>>>>..>>>..........<<<.>>>>.........<<<<................>>..>.......<..<<.<<<<..<.
GGCGACATTGCCAAGTGGTA.AGGCGGGGGACTGCAAACCCTTT............TtCCCCAGTTCAAATCCAGG.TGTCAACC scaffold87.trna1-CysGCA Sc: 30.02  Pseudo
..>>>>>..>>>..........<<<.>>>>>.......<<<<<.................>>>>.......<<<<..<<<<<...
ACCGACATAGCCGAGTGATA.AGGCTGGGGACTGCAAATCCTTT............TtTCCCAGTTCAAATTTGGA.TGTCGCCT lgII.trna40-CysGCA Sc: 27.57  





Gln tRNAs




>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<..................>>>>>.......<<<<<.<<<<<<<.
GGTCCCATGGTCTAGT.GGTcA.GGACATTGGACTCTGAATCCAGTA.............A.CCCGAGTTCAAATCTCGG.TGGGACCT scaffold66.trna3-GlnCTG Sc: 71.93  
GGTCCCATGGTCTAGT.GGTcA.GGACATTGGACTCTGAATCCAGTA.............A.CCCGAGTTCAAATCTCGG.TGGGACCT lgXIII.trna14-GlnCTG Sc: 71.93  
GGTCCCATGGTCTAGT.GGTcA.GGACATTGGACTCTGAATCCAGTA.............A.CCCGAGTTCAAATCTCGG.TGGGACCT lgIV.trna4-GlnCTG Sc: 71.93  
GGTTCCATGGTCTAGT.GGTcA.GGACATTGGACTCTGAATCCAGTA.............A.CCCGAGTTCAAATCTCGG.TGGAACCT lgI.trna56-GlnCTG Sc: 71.44  
GGTCCCATGGTGTAAT.GGTtA.GCACTCAGGACTCTGAATCCTGCG.............A.TCCGAGTTCAAGTCTCGG.TGGGACCT scaffold13262.trna6-GlnCTG Sc: 71.20  
GGTCCCGTGGTCTAGT.GGTgA.GGACATTGGACTCTGAATCCAGTA.............A.CCCGAGTTCAAATCTCGG.CGGGACCT lgIV.trna14-GlnCTG Sc: 70.84  
GGTTCCATGGTCTAGC.GGTtA.GGACATTAGACTCTGAATCTAGTA.............A.CCCGAGTTCAATTCTCGG.TGGAACCT scaffold29.trna2-GlnCTG Sc: 70.59  
GGTTCCATGGTCTAGT.GGTcA.GGACATTGGACTCTGAATCCAGTA.............A.CCCGAGTTCAAGTCTCGG.TGGAACCT lgXV.trna25-GlnCTG Sc: 69.79  
GGTTCCATGGTCTAGT.GGTcA.GGACATTGGACTCTGAATCCAGTA.............A.CCCGAGTTCAAGTCTCGG.TGGAACCT lgIII.trna14-GlnCTG Sc: 69.79  
GGTCCCATGGTCTAGT.GGTaA.GGACATTGGACTCTGAATCCAGTA.............A.CCCGAGTTCAAATCTCGG.TGGGACCT scaffold120.trna1-GlnCTG Sc: 69.12  
GGTTCCATGGTCTAGT.GGTaA.GGACATTGGACTCTGAATCCAGTA.............A.CCCGAGTTCAAATCTCGG.TGGAACCT lgII.trna16-GlnCTG Sc: 68.64  

>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<..................>>>>>.......<<<<<.<<<<<<<.
GGTTCTATGGTGTAGT.GGTtA.GCACTCTGGACTTTGAATCCAGCG.............A.CCTGGGTTCGACTCCCGG.TAGGACCT scaffold134.trna2-GlnTTG Sc: 74.09  
GGTTCTATGGTGTAGT.GGTtA.GCACTCTGGACTTTGAATCCAGCG.............A.CCTGGGTTCGACTCCCGG.TAGGACCT scaffold12860.trna1-GlnTTG Sc: 74.09  
GGTTCTATGGTGTAGT.GGTtA.GCACTCTGGACTTTGAATCCAGCG.............A.CCTGGGTTCGACTCCCGG.TAGGACCT lgXV.trna12-GlnTTG Sc: 74.09  
GGTTCTATGGTGTAGT.GGTtA.GCACTCTGGACTTTGAATCCAGCG.............A.CCTGGGTTCGACTCCCGG.TAGGACCT lgXII.trna10-GlnTTG Sc: 74.09  
GGTTCTATGGTGTAGT.GGTtA.GCACTCTGGACTTTGAATCCAGCG.............A.CCTGGGTTCGACTCCCGG.TAGGACCT lgV.trna8-GlnTTG Sc: 74.09  
GGTTCTATGGTGTAGT.GGTtA.GCACTCTGGACTTTGAATCCAGCG.............A.CCTGGGTTCGACTCCCGG.TAGGACCT lgV.trna18-GlnTTG Sc: 74.09  
GGTTCTATGGTGTAGT.GGTtA.GCACTCTGGACTTTGAATCCAGCG.............A.CCTGGGTTCGACTCCCGG.TAGGACCT lgIX.trna5-GlnTTG Sc: 74.09  
GGTTCTATGGTGTAGT.GGTtA.GCACTCTGGACTTTGAATCCAGCG.............A.CCTGGGTTCGACTCCCGG.TAGGACCT lgIV.trna17-GlnTTG Sc: 74.09  
GGTTCTATGGTGTAGT.GGTtA.GCACTCTGGACTTTGAATCCAGCG.............A.CCTGGGTTCGACTCCCGG.TAGGACCT lgIII.trna24-GlnTTG Sc: 74.09  
GGTTCTATGGTGTAGT.GGTtA.GCACTCTGGACTTTGAATCCAGCG.............A.CCTGGGTTCGACTCCCGG.TAGGACCT lgII.trna6-GlnTTG Sc: 74.09  
GGTTCTATGGTGTAGT.GGTtA.GCACTCTGGACTTTGAATCCAGCG.............A.CCTGGGTTCGACTCCCGG.TAGGACCT lgII.trna39-GlnTTG Sc: 74.09  
GGTCCCATGGTGTAAT.GGTgA.GCACTCTGGACTTTGAATCCAGCG.............A.TCCGAGTTCGAGTCTCGG.TGGGACCT scaffold12679.trna1-GlnTTG Sc: 70.28  
>>>>>>>..>>>............<<<..>>>>.......<<<<...................>>>>>.......<<<<<.<<<<<<<.
TGGGGCGTGGCCAAGC.GGT.A.AGGCAACGGGTTTTGATCCCGCCA.............TtCGGAGGTTCGAATCCTTC.CGTCCCAG scaffold4751.trna2-GlnTTG Sc: 52.77  
>>>>>>>..>>>............<<<.>>>>>.......<<<<<..................>>>>>.......<<<<<.<<<<<<<.
TGGAGTATAGCCAAGT.GGT.A.AGGCATCGGTTTTTGGTACCGGC.AT...........G.CAAAGGTTCGAATCCTTT.TACTCCAG scaffold438.trna2-GlnTTG Sc: 51.09  
TGGAGTATAGCCAAGT.GGT.A.AGGCATCGGTTTTTGGTACCGGC.AT...........G.CAAAGGTTCGAATCCTTT.TACTCCAG scaffold297.trna2-GlnTTG Sc: 51.09  
TGGAGTATAGCCAAGT.GGT.A.AGGCATCGGTTTTTGGTACCGGC.AT...........G.CAAAGGTTCGAATCCTTT.TACTCCAG scaffold1103.trna1-GlnTTG Sc: 51.09  
TGGAGTATAGCCAAGT.GGT.A.AGGCATCGGTTTTTGGTACCGGC.AT...........G.CAAAGGTTCGAATCCTTT.TACTCCAG scaffold1007.trna2-GlnTTG Sc: 51.09  
AGGGGAGTCGCCAAGTTGGTaA.AGGCACCGGATTTTGATTCCGGC.AT...........G.CGAGGGTTCGAGTCCTTC.CTCCCCTG scaffold5802.trna1-GlnTTG Sc: 44.32  
AGGGGAGTCGCCAAGTTGGTaA.AGGCACCGGATTTTGATTCCGGC.AT...........G.CGAGGGTTCGAGTCCTTC.CTCCCCTG scaffold3361.trna1-GlnTTG Sc: 44.32  





Glu tRNAs




>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.
TCCGTTGTAGTCTAGTTGGTt.A.GGATACTCGGCTCTCACCCGAGAG...........ACCCGGGTTCAAGTCCCGGCAACGGAA scaffold57.trna7-GluCTC Sc: 79.78  
TCCGTTGTAGTCTAGTTGGTt.A.GGATACTCGGCTCTCACCCGAGAG...........ACCCGGGTTCAAGTCCCGGCAACGGAA scaffold187.trna1-GluCTC Sc: 79.78  
TCCGTTGTAGTCTAGTTGGTt.A.GGATACTCGGCTCTCACCCGAGAG...........ACCCGGGTTCAAGTCCCGGCAACGGAA scaffold14777.trna1-GluCTC Sc: 79.78  
TCCGTTGTAGTCTAGTTGGTt.A.GGATACTCGGCTCTCACCCGAGAG...........ACCCGGGTTCAAGTCCCGGCAACGGAA scaffold134.trna1-GluCTC Sc: 79.78  
TCCGTTGTAGTCTAGTTGGTt.A.GGATACTCGGCTCTCACCCGAGAG...........ACCCGGGTTCAAGTCCCGGCAACGGAA lgXVI.trna10-GluCTC Sc: 79.78  
TCCGTTGTAGTCTAGTTGGTt.A.GGATACTCGGCTCTCACCCGAGAG...........ACCCGGGTTCAAGTCCCGGCAACGGAA lgXIV.trna22-GluCTC Sc: 79.78  
TCCGTTGTAGTCTAGTTGGTt.A.GGATACTCGGCTCTCACCCGAGAG...........ACCCGGGTTCAAGTCCCGGCAACGGAA lgXIII.trna7-GluCTC Sc: 79.78  
TCCGTTGTAGTCTAGTTGGTt.A.GGATACTCGGCTCTCACCCGAGAG...........ACCCGGGTTCAAGTCCCGGCAACGGAA lgV.trna6-GluCTC Sc: 79.78  
TCCGTTGTAGTCTAGTTGGTt.A.GGATACTCGGCTCTCACCCGAGAG...........ACCCGGGTTCAAGTCCCGGCAACGGAA lgIX.trna36-GluCTC Sc: 79.78  
TCCGTTGTAGTCTAGTTGGTt.A.GGATACTCGGCTCTCACCCGAGAG...........ACCCGGGTTCAAGTCCCGGCAACGGAA lgI.trna36-GluCTC Sc: 79.78  
TCCGTTGTAGTCTAGTTGGTc.A.GGATACTCGGCTCTCACCCGAGAG...........ACCCGGGTTCAAGTCCCGGCAACGGAA lgXI.trna18-GluCTC Sc: 77.70  
TCCGTTGTAGTCTAGTTGGTc.A.GGATACTCGGCTCTCACCCGAGAG...........ACCCGGGTTCAAGTCCCGGCAACGGAA lgVIII.trna12-GluCTC Sc: 77.70  
TCCGTTGTAGTCTAGTTGGTc.A.GGATATTCGGCTCTCACCCGAAAG...........ACCCGGGTTCAAGTCCCGGCAACGGAA scaffold10316.trna1-GluCTC Sc: 77.31  
TCCGTTGTAGTCTAGTTGGTc.A.GGATATTCGGCTCTCACCCGAAAG...........ACCCGGGTTCAAGTCCCGGCAACGGAA lgV.trna10-GluCTC Sc: 77.31  
TCCGTTGTAGTCTAGTTGGTc.A.GGATATTCGGCTCTCACCCGAAAG...........ACCCGGGTTCAAGTCCCGGCAACGGAA lgII.trna44-GluCTC Sc: 77.31  
TCCGTTGTAGTCTAGTTGGTt.A.GGATACTCGGCTCTCACCCGAGCG...........ACCCGGGTTCAAGTCCCGGCAACGGAA scaffold18402.trna1-GluCTC Sc: 77.21  
TCCGTTGTAGTCTAGTTGGTt.A.GGATACTCGGCTCTCACCCGAGCG...........ACCCGGGTTCAAGTCCCGGCAACGGAA lgVII.trna5-GluCTC Sc: 77.21  
TCCGTTGTAGTCTAGTTGGTt.A.GGATACTCGGCTCTCACCCGAGCG...........ACCCGGGTTCAAGTCCCGGCAACGGAA lgIV.trna23-GluCTC Sc: 77.21  
TCCGTTGTAGTCTAGTTGGTt.A.GGATACTCGGCTCTCACCCGAGCG...........ACCCGGGTTCAAGTCCCGGCAACGGAA lgIV.trna16-GluCTC Sc: 77.21  
TCCGTTGTAGTCTAGTTGGTt.A.GGATACTCGGCTCTCACCCGAGCG...........ACCCGGGTTCAAGTCCCGGCAACGGAA lgII.trna32-GluCTC Sc: 77.21  
TCCGTTGTAGTCTAGCTGGTc.A.GGATACTCGGCTCTCACCCGAGAG...........ACCCGGGTTCAAGTCCCGGCAACGGAA lgXI.trna19-GluCTC Sc: 75.25  
TCCGTTGTAGTCTAGTAGGTc.A.GGATACTCGGCTCTCACCCGAGAG...........ACCCGGGTTCAAGTCCCGGCAACGGAA lgVI.trna27-GluCTC Sc: 73.14  
>>>>>>>..>>>>...........<<<<.>.>>>.......<<<.<...............>>>>>.......<<<<<<<<<<<<.
TCCGTTGTAGTCTAGTTGGTc.A.GGATACTCGGCTCTCACCCGCGAG...........ACCCGGGTTCAAGTCCCGGCAACGGAA lgVI.trna26-GluCTC Sc: 71.18  
>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.
TCCGTTGTAGTCTAGTTGGTc.G.GGATATTCGGCTCTCACCCGAAAG...........ACCCGGGTTCAAGTCCCGGCAACGGAA lgV.trna11-GluCTC Sc: 69.44  

>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.
TCCGTTGTCGTCCAGC.GGTt.A.GGATATCTGGCTTTCACCCAGGAG...........ACCCGGGTTCGATTCCCGGCAACGGAA scaffold57.trna3-GluTTC Sc: 72.60  
TCCGTTGTCGTCCAGC.GGTt.A.GGATATCTGGCTTTCACCCAGGAG...........ACCCGGGTTCGATTCCCGGCAACGGAA scaffold41.trna1-GluTTC Sc: 72.60  
TCCGTTGTCGTCCAGC.GGTt.A.GGATATCTGGCTTTCACCCAGGAG...........ACCCGGGTTCGATTCCCGGCAACGGAA scaffold133.trna5-GluTTC Sc: 72.60  
TCCGTTGTCGTCCAGC.GGTt.A.GGATATCTGGCTTTCACCCAGGAG...........ACCCGGGTTCGATTCCCGGCAACGGAA lgXVIII.trna8-GluTTC Sc: 72.60  
TCCGTTGTCGTCCAGC.GGTt.A.GGATATCTGGCTTTCACCCAGGAG...........ACCCGGGTTCGATTCCCGGCAACGGAA lgXVIII.trna4-GluTTC Sc: 72.60  
TCCGTTGTCGTCCAGC.GGTt.A.GGATATCTGGCTTTCACCCAGGAG...........ACCCGGGTTCGATTCCCGGCAACGGAA lgXIII.trna3-GluTTC Sc: 72.60  
TCCGTTGTCGTCCAGC.GGTt.A.GGATATCTGGCTTTCACCCAGGAG...........ACCCGGGTTCGATTCCCGGCAACGGAA lgVII.trna9-GluTTC Sc: 72.60  
TCCGTTGTCGTCCAGC.GGTt.A.GGATATCTGGCTTTCACCCAGGAG...........ACCCGGGTTCGATTCCCGGCAACGGAA lgV.trna9-GluTTC Sc: 72.60  
TCCGTTGTCGTCCAGC.GGTt.A.GGATATCTGGCTTTCACCCAGGAG...........ACCCGGGTTCGATTCCCGGCAACGGAA lgIX.trna6-GluTTC Sc: 72.60  
TCCGTTGTCGTCCAGC.GGTt.A.GGATATCTGGCTTTCACCCAGGAG...........ACCCGGGTTCGATTCCCGGCAACGGAA lgIX.trna34-GluTTC Sc: 72.60  
TCCGTTGTCGTCCAGC.GGTt.A.GGATATCTGGCTTTCACCCAGGAG...........ACCCGGGTTCGATTCCCGGCAACGGAA lgII.trna43-GluTTC Sc: 72.60  
TCCGTTGTCGTCCAGC.GGTt.A.GGATATCTGGCTTTCACCCAGGAG...........ACCCGGGTTCGATTCCCGGCAACGGAA lgII.trna42-GluTTC Sc: 72.60  
TCCGTTGTCGTCCAGC.GGTt.A.GGATATCTGGCTTTCACCCAGGAG...........ACCCGGGTTCGATTCCCGGCAACGGAA lgI.trna20-GluTTC Sc: 72.60  
>>>>>>>..>>>>...........<<<<.>>>.>.......<.<<<...............>>>>>.......<<<<<<<<<<<<.
GTCCCTTTCGTCCAGT.GGTt.A.GGACATCGTCTTTTCATGTCGAAG...........ACACGGGTTCGATTCCCGTAAGGGATA scaffold635.trna5-GluTTC Sc: 65.98  
>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.
GCGCCCATCGTCTAGC.GGTctA.GGACGCCGCCCTTTCACGGCGGAA...........ACAGGGGTTCGATTCCCCTTGGGCGTA scaffold7222.trna1-GluTTC Sc: 63.52  
GTCCCCATCGTCTAGA.GGCctA.GGACATCGCCCTTTCACGGCGGTA...........ACCGGGGTTCGAATCCCCGTGGGGACG scaffold21940.trna1-GluTTC Sc: 58.29  
GACCCTATCGTCTAGA.GGCctA.GGACATCACCCTTTCACGGTGAGT...........ACCGGGGTTCGAATCCCCGTAGGGTCG scaffold2924.trna2-GluTTC Sc: 55.38  
GCCCTCATCGTCTAGT.GGTtcA.GGACATCTCTCTTTCAAGGAGGCA...........GCGGGGAGTCAACTTCCCCTGGGGGTA lgIX.trna1-GluTTC Sc: 39.98  





Gly tRNAs





>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<.
GCATCGGTGGTTCAGT.GGT..A.GAATGCTCGCCTGCCACGCGGGCG...........G.CCCGGGTTCGATTCCCGG.CCGATGCA scaffold13262.trna3-GlyGCC Sc: 82.25  
>>>>>>>..>>.>...........<.<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<.
GCACCAGTGGTCTAGT.GGT..A.GAATAGTACCCTGCCACGGTACAG...........A.CCCGGGTTCGATTCCCGG.CTGGTGCA scaffold773.trna1-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGT.GGT..A.GAATAGTACCCTGCCACGGTACAG...........A.CCCGGGTTCGATTCCCGG.CTGGTGCA scaffold70.trna1-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGT.GGT..A.GAATAGTACCCTGCCACGGTACAG...........A.CCCGGGTTCGATTCCCGG.CTGGTGCA scaffold57.trna6-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGT.GGT..A.GAATAGTACCCTGCCACGGTACAG...........A.CCCGGGTTCGATTCCCGG.CTGGTGCA scaffold4449.trna2-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGT.GGT..A.GAATAGTACCCTGCCACGGTACAG...........A.CCCGGGTTCGATTCCCGG.CTGGTGCA scaffold1077.trna1-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGT.GGT..A.GAATAGTACCCTGCCACGGTACAG...........A.CCCGGGTTCGATTCCCGG.CTGGTGCA lgXVI.trna14-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGT.GGT..A.GAATAGTACCCTGCCACGGTACAG...........A.CCCGGGTTCGATTCCCGG.CTGGTGCA lgXV.trna11-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGT.GGT..A.GAATAGTACCCTGCCACGGTACAG...........A.CCCGGGTTCGATTCCCGG.CTGGTGCA lgXV.trna10-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGT.GGT..A.GAATAGTACCCTGCCACGGTACAG...........A.CCCGGGTTCGATTCCCGG.CTGGTGCA lgXIX.trna3-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGT.GGT..A.GAATAGTACCCTGCCACGGTACAG...........A.CCCGGGTTCGATTCCCGG.CTGGTGCA lgXIII.trna11-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGT.GGT..A.GAATAGTACCCTGCCACGGTACAG...........A.CCCGGGTTCGATTCCCGG.CTGGTGCA lgXII.trna9-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGT.GGT..A.GAATAGTACCCTGCCACGGTACAG...........A.CCCGGGTTCGATTCCCGG.CTGGTGCA lgXII.trna8-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGT.GGT..A.GAATAGTACCCTGCCACGGTACAG...........A.CCCGGGTTCGATTCCCGG.CTGGTGCA lgXII.trna25-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGT.GGT..A.GAATAGTACCCTGCCACGGTACAG...........A.CCCGGGTTCGATTCCCGG.CTGGTGCA lgXI.trna7-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGT.GGT..A.GAATAGTACCCTGCCACGGTACAG...........A.CCCGGGTTCGATTCCCGG.CTGGTGCA lgIX.trna35-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGT.GGT..A.GAATAGTACCCTGCCACGGTACAG...........A.CCCGGGTTCGATTCCCGG.CTGGTGCA lgIV.trna5-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGT.GGT..A.GAATAGTACCCTGCCACGGTACAG...........A.CCCGGGTTCGATTCCCGG.CTGGTGCA lgIV.trna21-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGT.GGT..A.GAATAGTACCCTGCCACGGTACAG...........A.CCCGGGTTCGATTCCCGG.CTGGTGCA lgII.trna29-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGT.GGT..A.GAATAGTACCCTGCCACGGTACAG...........A.CCCGGGTTCGATTCCCGG.CTGGTGCA lgI.trna21-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGT.GGT..A.GAATAGTACCCTGCCACGGTACAG...........A.CCCGGGTTCGACTCCCGG.CTGGTGCA scaffold4449.trna1-GlyGCC Sc: 68.86  
>>>>>>>..>>.>...........<.<<.>>>.>.......<.<<<................>>>>>.......<<<<<.<<<<<<<.
GCACCAGTGGTCTAGT.GGT..A.GAATAGTAACCTGCCACGGTACAG...........A.CCCGGGTTCGATTCCCGG.CTGGTGCA lgII.trna41-GlyGCC Sc: 66.36  
>>>>.>>..>>.>...........<.<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<.<<<<.
GCACCAGTGGTCTAGT.GGT..A.GAATAGTACCCTGCCACGGTACAG...........A.CCCGGGTTCGATTCCCGG.CTTGTGCA lgXIII.trna18-GlyGCC Sc: 65.03  
>>>>>>>..>>.>...........<.<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<.
GCACCAGTGGTCTAGT.GGT..A.GAATAGTACCCTGCCACGGTACAG...........A.CCCGGGTTCGCTTCCCGG.CTGGTGCA lgII.trna10-GlyGCC Sc: 63.64  
>>>>>>...>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<..<<<<<<.
GCGGAAATAGCTTAAT.GGT..A.GAGCATAGCCTTGCCAAGGCTGAG...........GtTGAGGGTTCAAGTCCCTC.CTTCCGCT scaffold438.trna1-GlyGCC Sc: 59.63  
GCGGAAATAGCTTAAT.GGT..A.GAGCATAGCCTTGCCAAGGCTGAG...........GtTGAGGGTTCAAGTCCCTC.CTTCCGCT scaffold297.trna1-GlyGCC Sc: 59.63  
GCGGAAATAGCTTAAT.GGT..A.GAGCATAGCCTTGCCAAGGCTGAG...........GtTGAGGGTTCAAGTCCCTC.CTTCCGCT scaffold1007.trna1-GlyGCC Sc: 59.63  
>.>.>>>..>..>...........<..<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<.<.<.
GGGCCGG.GGGGCAGCGGGCgtA.GAATGCTCGCCTGCCACGCGGGCG...........G.CCCGGGTTCGATTCCCGG.CCGATGCA scaffold15635.trna1-GlyGCC Sc: 33.44  Pseudo
.>>>>>>..>.................<.>>>>>.......<<<<<..................>>>.......<<<...<<<<<<..
ATGGATATAGTCGAAT.GGT..A.AATTTTCTCTTTGCCAAGGAGAAG...........A.CACGGGTTCGATTCCCTC.TATTCACC lgIX.trna22-GlyGCC Sc: 32.00  
>>.>.....>>...............<<.>>.>.........<.<<................>>>>>.......<<<<<....<.<<.
GGGGTCCTGGCAGAGC.GGT..T.AGGCGCGCTCCTGCCACTGCCGAG...........GtTGGGGGTTCGACCCCCTT.CTTCGTCG lgI.trna2-GlyGCC Sc: 21.32  Pseudo

>>>>>>>..>>>.............<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<.
GCGCATCTAGTGTAGT.GGT..A.TCATAGTACCCTCCCACGGTACTG...........A.CCGGGGTTCGATTCCCCG.GATGCGCA scaffold132.trna1-GlyCCC Sc: 68.61  
GCGCATCTAGTGTAGT.GGT..A.TCATAGTACCCTCCCACGGTACTG...........A.CCGGGGTTCGATTCCCCG.GATGCGCA lgXV.trna3-GlyCCC Sc: 68.61  
GCGCATCTAGTGTAGT.GGT..A.TCATAGTACCCTCCCACGGTACTG...........A.CCGGGGTTCGATTCCCCG.GATGCGCA lgXIV.trna8-GlyCCC Sc: 68.61  
GCGCATCTAGTGTAGT.GGT..A.TCATAGTACCCTCCCACGGTACTG...........A.CCGGGGTTCGATTCCCCG.GATGCGCA lgXIV.trna19-GlyCCC Sc: 68.61  
GCGCATCTAGTGTAGT.GGT..A.TCATAGTACCCTCCCACGGTACTG...........A.CCGGGGTTCGATTCCCCG.GATGCGCA lgXII.trna24-GlyCCC Sc: 68.61  
GCGCATCTAGTGTAGT.GGT..A.TCATAGTACCCTCCCACGGTACTG...........A.CCGGGGTTCGATTCCCCG.GATGCGCA lgXII.trna16-GlyCCC Sc: 68.61  
GCGCATCTAGTGTAGT.GGT..A.TCATAGTACCCTCCCACGGTACTG...........A.CCGGGGTTCGATTCCCCG.GATGCGCA lgXI.trna11-GlyCCC Sc: 68.61  

>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<.
GCGTTTGTAGTCCAAC.GGTt.A.GGATAATTGCCTTCCAAGCAATAG...........A.CCCGGGTTCGACTCCCGG.CAAACGCA lgXV.trna8-GlyTCC Sc: 74.33  
GCGTTTGTAGTCCAAC.GGTt.A.GGATAATTGCCTTCCAAGCAATAG...........A.CCCGGGTTCGACTCCCGG.CAAACGCA lgVI.trna28-GlyTCC Sc: 74.33  
GCGTTTGTAGTCCAAC.GGTt.A.GGATAATTGCCTTCCAAGCAATAG...........A.CCCGGGTTCGACTCCCGG.CAAACGCA lgI.trna6-GlyTCC Sc: 74.33  
GCGTTTGTAGTCCAAC.GGTt.A.GGATAATTGCCTTCCAAGCAATAG...........A.CCCGGGTTCGACTCCCGG.CAGACGCA scaffold8400.trna1-GlyTCC Sc: 73.14  
GCGTTTGTAGTCCAAC.GGTt.A.GGATAATTGCCTTCCAAGCAATAG...........A.CCCGGGTTCGACTCCCGG.CAGACGCA scaffold4003.trna1-GlyTCC Sc: 73.14  
GCGTTTGTAGTCCAAC.GGTt.A.GGATAATTGCCTTCCAAGCAATAG...........A.CCCGGGTTCGACTCCCGG.CAGACGCA lgXVIII.trna2-GlyTCC Sc: 73.14  
GCGTTTGTAGTCCAAC.GGTt.A.GGATAATTGCCTTCCAAGCAATAG...........A.CCCGGGTTCGACTCCCGG.CAGACGCA lgXVI.trna21-GlyTCC Sc: 73.14  
GCGTTTGTAGTCCAAC.GGTt.A.GGATAATTGCCTTCCAAGCAATAG...........A.CCCGGGTTCGACTCCCGG.CAGACGCA lgXIX.trna2-GlyTCC Sc: 73.14  
GCGTTTGTAGTCCAAC.GGTt.A.GGATAATTGCCTTCCAAGCAATAG...........A.CCCGGGTTCGACTCCCGG.CAGACGCA lgXIX.trna1-GlyTCC Sc: 73.14  
GCGTTTGTAGTCCAAC.GGTt.A.GGATAATTGCCTTCCAAGCAATAG...........A.CCCGGGTTCGACTCCCGG.CAGACGCA lgIX.trna3-GlyTCC Sc: 73.14  
GCGTTTGTAGTCCAAC.GGTt.A.GGATAATTGCCTTCCAAGCAATAG...........A.CCCGGGTTCGACTCCCGG.CAGACGCA lgIX.trna29-GlyTCC Sc: 73.14  
GCGTTTGTAGTCCAAC.GGTt.A.GGATAATTGCCTTCCAAGCAATAG...........A.CCCGGGTTCGACTCCCGG.CAGACGCA lgIX.trna20-GlyTCC Sc: 73.14  
GCGTTTGTAGTCCAAC.GGTt.A.GGATAATTGCCTTCCAAGCAATAG...........A.CCCGGGTTCGACTCCCGG.CAGACGCA lgIII.trna29-GlyTCC Sc: 73.14  
GCGTTTGTAGTCCAAC.GGTt.A.GGATAATTGCCTTCCAAGCAATAG...........A.CCCGGGTTCGACTCCCGG.CAGACGCA lgI.trna61-GlyTCC Sc: 73.14  
GCGTTTGTAGTCCAAC.GGTt.A.GGATAATTGCCTTCCAAGCAATAG...........A.CCCGGGTTCGACTCCCGG.CAGACGCA lgI.trna17-GlyTCC Sc: 73.14  
GCGTTTGTAGTCCAAC.GGTc.A.GGATAATTGCCTTCCAAGCAATAG...........A.CCCGGGTTCGACTCCCGG.CAAACGCA lgI.trna50-GlyTCC Sc: 72.24  
GCGTTTGTAGTCCAAC.GGTc.A.GGATAATTGCCTTCCAAGCAATAG...........A.CCCGGGTTCGACTCCCGG.CAGACGCA lgVI.trna17-GlyTCC Sc: 71.06  
GCGTTTGTAGTCCAAC.GGTt.A.GGATAATTGCCTTCCAAGCAATAG...........A.TCCGGGTTCGACTCCCGG.CAGACGCA scaffold66.trna5-GlyTCC Sc: 70.48  
GCGTTTGTAGTCCAAC.GGTc.A.GGATAATTGCCTTCCAAGCAATAG...........A.TCCGGGTTCGACTCCCGG.CAGACGCA lgXVIII.trna3-GlyTCC Sc: 68.39  
>>>>>>>..>>>>...........<<<<..>>>>.......<<<<.................>>>>>.......<<<<<.<<<<<<<.
GCGGGAGTAGTTCAAT.GGT..A.GAACCCTAGCCTTCCAAGCTAATG...........A.CGCGGGTTCGATTCCCGT.CTCCCGCT scaffold11214.trna3-GlyTCC Sc: 66.40  
GCGGGTGTAGCTCAAT.GGT..A.GAGCAGAAGCCTTCCAAGCTTACG...........A.CGAGGGTTCGATTCCCTT.CACCCGCT scaffold3183.trna2-GlyTCC Sc: 64.15  





His tRNAs





>>>>>>>..>>>>............<<<<.>>>>>.......<<<<<...................>>>>>.......<<<<<...<<<<<<<.
GTGGCTGTAGCTCAGTTGGT..A..GAGTCCAGGATTGTGATTCCTGTT..............GtCGTGGGTTCGAGCCCCAT...CAGCCACC scaffold9629.trna2-HisGTG Sc: 66.26  
GTGGCTGTAGCTCAGTTGGT..A..GAGTCCAGGATTGTGATTCCTGTT..............GtCGTGGGTTCGAGCCCCAT...CAGCCACC scaffold9629.trna1-HisGTG Sc: 66.26  
GTGGCTGTAGTTTAGT.GGTg.A..GAATTCCACGTTGTGGCCGTGGAG..............A.CCTGGGCTCGAATCCCAG...CAGCCACA scaffold57.trna5-HisGTG Sc: 63.70  
GTGGCTGTAGTTTAGT.GGTg.A..GAATTCCACGTTGTGGCCGTGGAG..............A.CCTGGGCTCGAATCCCAG...CAGCCACA lgXI.trna3-HisGTG Sc: 63.70  
GTGGCTGTAGTTTAGT.GGTg.A..GAATTCCACGTTGTGGCCGTGGAG..............A.CCTGGGCTCGAATCCCAG...CAGCCACA lgVIII.trna6-HisGTG Sc: 63.70  
GTGGCTGTAGTTTAGT.GGTg.A..GAATTCCACGTTGTGGCCGTGGAG..............A.CCTGGGCTCGAATCCCAG...CAGCCACA lgIII.trna17-HisGTG Sc: 63.70  
GTGGCTGTAGTTTAGT.GGTg.A..GAATTCCACGTTGTGGCCGTGGAG..............A.CCTGGGCTCGAATCCCAG...CAGCCACA lgI.trna28-HisGTG Sc: 63.70  
GTGGCTGTAGTTTAGT.GGTa.A..GAATTCCACGTTGTGGCCGTGGAG..............A.CCTGGGCTCGAATCCCAG...CAGCCACA lgX.trna28-HisGTG Sc: 62.38  
GTGGCTGTAGTTTAGT.GGTa.A..GAATTCCACGTTGTGGCCGTGGAG..............A.CCTGGGCTCGAATCCCAG...CAGCCACA lgX.trna19-HisGTG Sc: 62.38  
GTGGCTGTAGTTTAGT.GGTa.A..GAATTCCACGTTGTGGCCGTGGAG..............A.CCTGGGCTCGAATCCCAG...CAGCCACA lgX.trna16-HisGTG Sc: 62.38  
GTGGCTGTAGTTTAGT.GGTa.A..GAATTCCACGTTGTGGCCGTGGAG..............A.CCTGGGCTCGAATCCCAG...CAGCCACA lgVIII.trna39-HisGTG Sc: 62.38  
GTGGCTGTAGTTTAGT.GGTa.A..GAATTCCACGTTGTGGCCGTGGAG..............A.CCTGGGCTCGAATCCCAG...CAGCCACA lgVIII.trna37-HisGTG Sc: 62.38  
GTGGCTGTAGTTTAGT.GGTa.A..GAATTCCACGTTGTGGCCGTGGAG..............A.CCTGGGCTCGAATCCCAG...CAGCCACA lgVII.trna4-HisGTG Sc: 62.38  
>.>>>>>..>>>>............<<<<.>>>>>.......<<<<<...................>>>>>.......<<<<<...<<<<<.<.
GTGGCTGTAGTTTAGT.GGTa.A..GAATTCCACGTTGTGGCCGTGGAG..............A.CCTGGGCTCGAATCCCAG...CAGCCTCA scaffold1591.trna1-HisGTG Sc: 56.89  
GTGGCTGTAGTTTAGT.GGTa.A..GAATTCCACGTTGTGGCCGTGGAG..............A.CCTGGGCTCGAATCCCAG...CAGCCTCA lgVIII.trna31-HisGTG Sc: 56.89  
>>>>>>>..>>>..............<<<.>>>>>.......<<<<<...................>>>>>.......<<<<<...<<<<<<<.
GCGGATGTAGCCAAGT.GGAtcA..AGGCAGTGGATTGTGAATCCACC.AT............G.CGCGGGTTCAATTCCCGT...CATTCGCC scaffold3402.trna2-HisGTG Sc: 53.21  
GCGGATGTAGCCAAGT.GGAtcA..AGGCAGTGGATTGTGAATCCACC.AT............G.CGCGGGTTCAATTCCCGT...CATTCGCC scaffold18642.trna1-HisGTG Sc: 53.21  
GCGGATGTAGCCAAGT.GGAtcA..AGGCAGTGGATTGTGAATCCACC.AC............G.CGCGGGTTCAATCCCCGT...CGTTCGCC scaffold431.trna1-HisGTG Sc: 50.71  
>>>>>>>.....>............<....>>>>>.......<<<<<...................>>>>>.......<<<<<...<<<<<<<.
GTGGCTGTA...CAA..GGT..A..GAATTCTACGTTGTGGCCGTAGAG..............A.CCTGGGCTCGAATCCCAG...CAGCCACA lgXIV.trna7-HisGTG Sc: 34.05  
>>>>.....>>.>............<.<<.>>>>>.......<<<<<...................>>>>>.......<<<<<......<<<<.
GGCT.....GTACAA..GGT..A..GAATTCTACGTTGTGGCCGTAGAG..............A.CCTGGGCTCGAATCCCAG...C..AGCCA scaffold18795.trna1-HisGTG Sc: 26.93  Pseudo
>>..>>>..>>>..............<<<.>>>>>.......<<<<<...................>..>>.......<<..<...<<<..<<.
GTGCATGTAGTCAAGT.GGAtcA..AGGTAGTGGATTGTGAATCCACCATGT...........G.CG..GGTTCAATTCCTAT...CATTAACC scaffold201.trna1-HisGTG Sc: 22.13  Pseudo





Ile tRNAs




>>>>>>>..>>>>..........<<<<.>>>>>...............................<<<<<................>>>>>.......<<<<.<.<<<<<<<.
GGCCTATTAGCTCAGTTGGTtA.GAGCGTCGTGCTAATA...................A.....CGCGAAG...........GtCGCAGGTTCGAAACCTG.C.ATAGGCCA scaffold10221.trna1-IleAAT Sc: 85.07  
GGCCTATTAGCTCAGTTGGTtA.GAGCGTCGTGCTAATA...................A.....CGCGAAG...........GtCGCAGGTTCGAAACCTG.C.ATGGGCCA scaffold155.trna1-IleAAT Sc: 83.89  
GGCCTATTAGCTCAGTTGGTtA.GAGCGTCGTGCTAATA...................A.....CGCGAAG...........GtCGCAGGTTCGAAACCTG.C.ATGGGCCA lgXVII.trna1-IleAAT Sc: 83.89  
GGCCTATTAGCTCAGTTGGTtA.GAGCGTCGTGCTAATA...................A.....CGCGAAG...........GtCGCAGGTTCGAAACCTG.C.ATGGGCCA lgXVI.trna24-IleAAT Sc: 83.89  
GGCCTATTAGCTCAGTTGGTtA.GAGCGTCGTGCTAATA...................A.....CGCGAAG...........GtCGCAGGTTCGAAACCTG.C.ATGGGCCA lgXIV.trna12-IleAAT Sc: 83.89  
GGCCTATTAGCTCAGTTGGTtA.GAGCGTCGTGCTAATA...................A.....CGCGAAG...........GtCGCAGGTTCGAAACCTG.C.ATGGGCCA lgXII.trna3-IleAAT Sc: 83.89  
GGCCTATTAGCTCAGTTGGTtA.GAGCGTCGTGCTAATA...................A.....CGCGAAG...........GtCGCAGGTTCGAAACCTG.C.ATGGGCCA lgXI.trna20-IleAAT Sc: 83.89  
GGCCTATTAGCTCAGTTGGTtA.GAGCGTCGTGCTAATA...................A.....CGCGAAG...........GtCGCAGGTTCGAAACCTG.C.ATGGGCCA lgX.trna9-IleAAT Sc: 83.89  
GGCCTATTAGCTCAGTTGGTtA.GAGCGTCGTGCTAATA...................A.....CGCGAAG...........GtCGCAGGTTCGAAACCTG.C.ATGGGCCA lgX.trna25-IleAAT Sc: 83.89  
GGCCTATTAGCTCAGTTGGTtA.GAGCGTCGTGCTAATA...................A.....CGCGAAG...........GtCGCAGGTTCGAAACCTG.C.ATGGGCCA lgVIII.trna3-IleAAT Sc: 83.89  
GGCCTATTAGCTCAGTTGGTtA.GAGCGTCGTGCTAATA...................A.....CGCGAAG...........GtCGCAGGTTCGAAACCTG.C.ATGGGCCA lgVIII.trna27-IleAAT Sc: 83.89  
GGCCTATTAGCTCAGTTGGTtA.GAGCGTCGTGCTAATA...................A.....CGCGAAG...........GtCGCAGGTTCGAAACCTG.C.ATGGGCCA lgVII.trna24-IleAAT Sc: 83.89  
GGCCTATTAGCTCAGTTGGTtA.GAGCGTCGTGCTAATA...................A.....CGCGAAG...........GtCGCAGGTTCGAAACCTG.C.ATGGGCCA lgIX.trna9-IleAAT Sc: 83.89  
GGCCTATTAGCTCAGTTGGTtA.GAGCGTCGTGCTAATA...................A.....CGCGAAG...........GtCGCAGGTTCGAAACCTG.C.ATGGGCCA lgIX.trna44-IleAAT Sc: 83.89  
GGCCTATTAGCTCAGTTGGTtA.GAGCGTCGTGCTAATA...................A.....CGCGAAG...........GtCGCAGGTTCGAAACCTG.C.ATGGGCCA lgIX.trna31-IleAAT Sc: 83.89  
GGCCTATTAGCTCAGTTGGTtA.GAGCGTCGTGCTAATA...................A.....CGCGAAG...........GtCGCAGGTTCGAAACCTG.C.ATGGGCCA lgIX.trna30-IleAAT Sc: 83.89  
GGCCTATTAGCTCAGTTGGTtA.GAGCGTCGTGCTAATA...................A.....CGCGAAG...........GtCGCAGGTTCGAAACCTG.C.ATGGGCCA lgIV.trna11-IleAAT Sc: 83.89  
GGCCTATTAGCTCAGTTGGTtA.GAGCGTCGTGCTAATA...................A.....CGCGAAG...........GtCGCAGGTTCGAAACCTG.C.ATGGGCCA lgII.trna20-IleAAT Sc: 83.89  
>>>>>>>..>>>>..........<<<<.>>>>>...............................<<<<<................>.>>>.......<<<..<.<<<<<<<.
GGCCCATTAGCTCAGTTGGTtA.GAGCGTCGTGCTAATA...................A.....CGCGAAG...........GtCGTGGGTTCGATCCCCC.C.ATGGGCCA scaffold5338.trna2-IleAAT Sc: 82.79  
>>>>>>>..>>>>..........<<<<.>>>>>...............................<<<<<................>>>>>.......<<<<.<.<<<<<<<.
GGCCTATTAGCTCAGCTGGTtA.GAGCGTCGTGCTAATA...................A.....CGCGAAG...........GtCGCAGGTTCGAAACCTG.C.ATGGGCCA lgV.trna20-IleAAT Sc: 81.44  
GGCCTATTAGCTCAGCTGGTtA.GAGCGTCGTGCTAATA...................A.....CGCGAAG...........GtCGCAGGTTCGAGACCTG.C.ATGGGCCA scaffold57.trna8-IleAAT Sc: 79.79  
>>>>>>>..>>>>..........<<<<.>>>>>...............................<<<<<................>>>.>.......<.<<.<.<<<<<<<.
GGCCTATTAGCTCAGTTGGTtA.GAGCGTCGTGCTAATA...................A.....CGCGAAG...........GtCGCAGGTTCGAAACGTG.C.ATGGGCCA lgXVI.trna13-IleAAT Sc: 76.24  
>>>>>>...>>>>..........<<<<.>>.>>...............................<<.<<................>>>>>.......<<<<.<..<<<<<<.
TAGTAGGTGGCTCAAT.GGTaA.GAGTTTGAGACTAATGgatttgctt..........C.....TCCTATG...........AtTTCAGGTTCGAACCTTGtG.GTTGCTAA lgIII.trna21-IleAAT Sc: 23.59  

>>>>>>>..>>>>..........<<<<.>>>>>...............................<<<<<................>>>>>.......<<<<.<.<<<<<<<.
GGGTCTGTAGCTCAGCTGGTtA.GAGCACCGTCTTGATA...................A.....GGCGGGG...........GtCGTTGGTTCGAGCCCAA.C.TAGACCCA scaffold7095.trna1-IleGAT Sc: 70.28  
>>>>>>>..>>>>..........<<<<..>>>>...............................<<<<.................>>>>>.......<<<<.<.<<<<<<<.
TCGACCTTAGCTCAGT.GGCgA.GAGCAGAGGGCTGATT...................C.....CTCT.AG...........GtCGCTGGTTCGATTCCGG.C.AGGTCGAG lgXV.trna7-IleGAT Sc: 54.13  
>>>>>>>..>>>............<<<.>>.....................................<<................>>>>>.......<<<<.<.<<<<<<<.
GCATCCATGGCTGAAT.GGTtA.AAGCGAT......GGA...................T.....A..ATA............G.AGTGGGTTCGATTCCTG.C.TGGATGCA scaffold653.trna1-IleGAT Sc: 33.75  
GCATCCATGGCTGAAT.GGTtA.AAGCGAT......GGA...................T.....A..ATA............G.AGTGGGTTCGATTCCTG.C.TGGATGCA scaffold451.trna4-IleGAT Sc: 33.75  
GCATCCATGGCTGAAT.GGTtA.AAGCGAT......GGA...................T.....A..ATA............G.AGTGGGTTCGATTCCTG.C.TGGATGCA scaffold451.trna3-IleGAT Sc: 33.75  

>>>>>>>..>>>>..........<<<<.>>>>>...............................<<<<<................>>>>>.......<<<<.<.<<<<<<<.
GGTCCCGTAGCTCAGTTGGTtA.GAGCGTTGGTCTTATG...................A.....GCCGAAG...........GtCGCGGGTTCGAGCCCCG.C.CGGGACCA scaffold9690.trna1-IleTAT Sc: 85.40  
GGTCCCGTAGCTCAGTTGGTtA.GAGCGTTGGTCTTATG...................A.....GCCGAAG...........GtCGCGGGTTCGAGCCCCG.C.CGGGACCA scaffold164.trna1-IleTAT Sc: 85.40  
GGTCCCGTAGCTCAGTTGGTtA.GAGCGTTGGTCTTATG...................A.....GCCGAAG...........GtCGCGGGTTCGAGCCCCG.C.CGGGACCA lgXI.trna6-IleTAT Sc: 85.40  
GGTCCCGTAGCTCAGTTGGTtA.GAGCGTTGGTCTTATG...................A.....GCCGAAG...........GtCGCGGGTTCGAGCCCCG.C.CGGGACCA lgXI.trna17-IleTAT Sc: 85.40  
GGTCCCGTAGCTCAGTTGGTtA.GAGCGTTGGTCTTATG...................A.....GCCGAAG...........GtCGCGGGTTCGAGCCCCG.C.CGGGACCA lgVI.trna32-IleTAT Sc: 85.40  
GGTCCCGTAGCTCAGTTGGTtA.GAGCGTTGGTCTTATG...................A.....GCCGAAG...........GtCGCGGGTTCGAGCCCCG.C.CGGGACCA lgIX.trna14-IleTAT Sc: 85.40  
GGTCCCGTAGCTCAGTTGGTtA.GAGCGTTGGTCTTATG...................A.....GCCGAAG...........GtCGCGGGTTCGAGCCCCG.C.CGGGACCA lgI.trna45-IleTAT Sc: 85.40  
GGTCCCGTAGCTCAGTTGGTtA.GAGCGTTGGTCTTATG...................A.....GCCGAAG...........GtCGCGGGTTCGAGCCCCG.C.CGGGACCA lgI.trna32-IleTAT Sc: 85.40  
GCTCCAGTGGCGCAATCGGTtA.GCGCGTGGTACTTATAtggcagtaactgttgggcaA.....TGCCGAG...........GtTGTGAGTTCAAGCCTCA.C.CTGGAGCA scaffold15441.trna3-IleTAT Sc: 62.87  
>>>>>>>...>>>..........<<<..>>>>>...............................<<<<<................>>>>>.......<<<<.<.<<<<<<<.
GTGGCTGTACTTTAAT.GGT...AAATTCCATGCTTATG...................Tgg...CGTGGAG...........A.CCTGGGCTCGAATCCCA.G.CAGTCACA lgXVI.trna19-IleTAT Sc: 34.51  





Leu tRNAs




>>>>>>>...>>>...............<<<.>>>>>.................<<.<<<..>>................<<...>>>>>.......<<<..<..<.....<<<<<<<.
GTTGAGA.TGGCCGAGTT.GGTctA..AGGCGCCAGATTAAGG..........TTC.TGGT.CCGA............AAGGG.CGTGGGTTCAAATCCC..A..C.....TCTCAACA scaffold7153.trna1-LeuAAG Sc: 69.68  
GTTGAGA.TGGCCGAGTT.GGTctA..AGGCGCCAGATTAAGG..........TTC.TGGT.CCGA............AAGGG.CGTGGGTTCAAATCCC..A..C.....TCTCAACA scaffold66.trna6-LeuAAG Sc: 69.68  
GTTGAGA.TGGCCGAGTT.GGTctA..AGGCGCCAGATTAAGG..........TTC.TGGT.CCGA............AAGGG.CGTGGGTTCAAATCCC..A..C.....TCTCAACA lgXVIII.trna11-LeuAAG Sc: 69.68  
GTTGAGA.TGGCCGAGTT.GGTctA..AGGCGCCAGATTAAGG..........TTC.TGGT.CCGA............AAGGG.CGTGGGTTCAAATCCC..A..C.....TCTCAACA lgXVII.trna2-LeuAAG Sc: 69.68  
GTTGAGA.TGGCCGAGTT.GGTctA..AGGCGCCAGATTAAGG..........TTC.TGGT.CCGA............AAGGG.CGTGGGTTCAAATCCC..A..C.....TCTCAACA lgXVI.trna15-LeuAAG Sc: 69.68  
GTTGAGA.TGGCCGAGTT.GGTctA..AGGCGCCAGATTAAGG..........TTC.TGGT.CCGA............AAGGG.CGTGGGTTCAAATCCC..A..C.....TCTCAACA lgXIV.trna3-LeuAAG Sc: 69.68  
GTTGAGA.TGGCCGAGTT.GGTctA..AGGCGCCAGATTAAGG..........TTC.TGGT.CCGA............AAGGG.CGTGGGTTCAAATCCC..A..C.....TCTCAACA lgVII.trna14-LeuAAG Sc: 69.68  
GTTGAGA.TGGCCGAGTT.GGTctA..AGGCGCCAGATTAAGG..........TTC.TGGT.CCGA............AAGGG.CGTGGGTTCAAATCCC..A..C.....TCTCAACA lgVII.trna13-LeuAAG Sc: 69.68  
GTTGAGA.TGGCCGAGTT.GGTctA..AGGCGCCAGATTAAGG..........TTC.TGGT.CCGA............AAGGG.CGTGGGTTCAAATCCC..A..C.....TCTCAACA lgVII.trna12-LeuAAG Sc: 69.68  
GTTGAGA.TGGCCGAGTT.GGTctA..AGGCGCCAGATTAAGG..........TTC.TGGT.CCGA............AAGGG.CGTGGGTTCAAATCCC..A..C.....TCTCAACA lgVI.trna7-LeuAAG Sc: 69.68  
GTTGAGA.TGGCCGAGTT.GGTctA..AGGCGCCAGATTAAGG..........TTC.TGGT.CCGA............AAGGG.CGTGGGTTCAAATCCC..A..C.....TCTCAACA lgV.trna23-LeuAAG Sc: 69.68  
GTTGAGA.TGGCCGAGTT.GGTctA..AGGCGCCAGATTAAGG..........TTC.TGGT.CCGA............AAGGG.CGTGGGTTCAAATCCC..A..C.....TCTCAACA lgV.trna22-LeuAAG Sc: 69.68  
GTTGAGA.TGGCCGAGTT.GGTctA..AGGCGCCAGATTAAGG..........TTC.TGGT.CCGA............AAGGG.CGTGGGTTCAAATCCC..A..C.....TCTCAACA lgII.trna30-LeuAAG Sc: 69.68  
GTTGAGA.TGGCCGAGTT.GGTctA..AGGCGCCAGATTAAGG..........TTC.TGGT.CCGA............AAGGG.CGTGGGTTCAAATCCC..A..C.....TCTCAACA lgI.trna24-LeuAAG Sc: 69.68  
GTGGAGA.TGGCCGAGTT.GGTctA..AGGCGCCAGATTAAGG..........TTC.TGGT.CCGA............AAGGG.CGTGGGTTCAAATCCC..A..C.....TCTCCACA lgXII.trna6-LeuAAG Sc: 68.97  
>>>>>>....>>.>.............<.<<.>>>>>.................<<.<<<.........................>>>>>.......<<<..<..<......<<<<<<.
TAGTAGG.TGGTCTAGT..GGTa.A..GAACTTGGGACTAAGAagtttgctt.TTC.CTGTG....................GtCTCAGGTTCGAGCCCT..Gt.G.....GTTGCTAA lgXI.trna9-LeuAAG Sc: 32.01  
>>>>>>....>.>>.............<<.<.>>>>>.................<<.<<<.........................>>>>>.......<<<..<..<......<<<<<<.
TAGTAGG.TGGCTCAGT..GGTa.A..GAACGTGGGACTAAGGggtttgctc.TTC.CTGTG....................GtCTCAGGTTCGAGCCCT..Gt.G.....GTTGCTAA lgI.trna40-LeuAAG Sc: 31.83  
>>>>>>....>>>>.............<<<<.>>>>>.................<<.<<<.........................>>>>>.......<<<..<..<......<<<<<<.
TAGTAGG.TGGCTCAGT..GGTa.A..GAGTTTGGGATCAAGGggtttg....CTC.CCAC.......TGTG..........GtCTCAGGTTCGAACCCT..Gt.G.....GTTACTAA lgVII.trna18-LeuAAG Sc: 31.26  
TAGTAGA.TGGCTCAGT..GATa.A..GAGTTTAGGACTAAGGggtttgttc.CTC.CTGTG....................AtTTCAGGTTCGAACCCT..Gt.G.....GTTGCTAA scaffold148.trna1-LeuAAG Sc: 29.69  
.>>>>.....>>.>.............<.<<.>>>>>.................<<.<<<.........................>>>>>.......<<<..<..<.......<<<<..
CGGTATG.TGGCCCAGT..GGTa.A..GAGCTTGGGACTAAGAggtttgttc.CTC.CTATG....................AtCTCAGGTTCGAGCCCT..Gt.G.....GTTGCTAA lgXVI.trna4-LeuAAG Sc: 29.61  Pseudo
>>>>>>....>>.>.............<.<<..>>>>.................<<.<<..........................>>>>>.......<<<..<..<......<<<<<<.
TAGTAGG.TGGCCTAGT..GGTa.A..GAGCTTGGGACTAAGGggtttg....CTC.CCTA.......TGTG..........GtCTCAGGTTCGAACCCT..Gt.A.....GTTGCTAA scaffold258.trna1-LeuAAG Sc: 28.57  
>>>>>>....>>.>.............<.<<.>>>>>.................<<.<<<.........................>>>>>.......<<<..<..<......<<<<<<.
TAGTAGG.TGGTCTAGT..GGTa.A..GAACTTGGGATTAAGGggtttgttt.CTC.CTGTG....................GtCTCAGGTTCGAGCCCT..Gt.G.....GTTGTTAA lgI.trna31-LeuAAG Sc: 28.55  
>>>>......>>>>.............<<<<.>>>>>.................<<.<<<..........................>>>>.......<<<..<...........<<<<.
GCAAG...TGGCTCAGT..GGTa.A..GAGCTTGGGACTAAGGggtttgctc.CTT.CTGTG....................GtCTCAGGTTCGAGCCCT..G..T.....G.GTTGCT lgI.trna11-LeuAAG Sc: 28.07  
>>.>.>....>>>>.............<<<<.>>>>>.................<<.<<<.........................>>>>>.......<<<..<..<......<.<.<<.
TAATTGG.TGGTTTAGT..GGTa.A..GAACTTGGGGTTAAGAggtttgctt.CCC.CTGTG....................GtCTCAGGTTCGAGCCCT..Gt.G.....GTTACTAA scaffold15838.trna1-LeuAAG Sc: 26.29  
>.>>>>>...>>>>.............<<<<.>>>>...................<.<<<.........................>>>>>.......<<<..<..<.....<<<<<.<.
TAGGTGA.TGGCTTAGT..GGTa.A..AAGCTTAGGACTAAGAagtttgctt.CCT.CTATG....................GtCTCAGGTTCGAGCCCTatG..G.....TTGCTCAT lgVII.trna6-LeuAAG Sc: 25.51  
.>>>>>....>>>>.............<<<<.>>>>>.................<<.<<<..........................>>>>.......<<<..<.........<<<<<..
AGGTGG..TGGCTCAGT..GGTa.A..GAGTTTGGGACTAAGAggtttgctc.CTT.CTGTG....................GtCTCAGGTTCGAGCCCT..G..Tg....GTTGCTCA scaffold8505.trna1-LeuAAG Sc: 24.85  
>>>>>>>...>>>>.............<<<<.>>>>>.................<<.<<<.........................>>>>>.......<<<..<..<.....<<<<<<<.
TAGGTGA.TGGCTCAGT..GGTa.A..GAGTTTGGGACCAAGAtgtttgttt.CTT.CTGTG....................GtTTCAGGTTCGAGCCCT..GtgG.....TTGCTTAT scaffold64.trna2-LeuAAG Sc: 24.72  Pseudo
>>>>>>>...>>>...............<<<..>>>>.................<<.<<..........................>>>>>.......<<<..<..<.....<<<<<<<.
TAAGTGG.TGGCTCAAT..GGTa.A..AAGCTTGGGACTAAGAggtttg....CTC.CCTC.......TATG..........GtTTCAGGTTCGAATCCT..GcgA.....TTGCTTAT lgXV.trna21-LeuAAG Sc: 24.52  
>>>>>>....>>.>.............<.<<..>>>>.................<<.<<..........................>>>>>.......<<<..<..<......<<<<<<.
TAGTAGG.TGGTCCAGT..GGTa.A..GAGCTTGGGACTAAGGggtttg....CTC.CCCT.......TCTG..........GtTTCAGGTTCGAGCCCT..Gt.G.....GTTGCTAA lgXVI.trna8-LeuAAG Sc: 23.98  
>.>>>.....>>.>.............<.<<.>>>>>.................<<.<<<..........................>>>>.......<<<..<..........<<<.<.
GTCGG...TGGCCCAGT..GGTa.A..GAGCTTAGGATCAAGGgatttgctc.CTC.CTGTG....................GtCTCAGGTTCGAGTCCT..G..T.....GGTTGCTA scaffold644.trna1-LeuAAG Sc: 23.65  Pseudo
>>.>>>....>>>>.............<<<<..>>>>.................<<.<<..........................>>>>>.......<<<..<..<......<<<.<<.
TAATAGG.TGGCTCAGT..GGTa.A..GAGCTTGGGATTAAGAagtttg....CTC.CCCTG......TG............GtCTCAGGTTCGAGCCTT..Gt.G.....GTTGCTAA lgXVII.trna4-LeuAAG Sc: 23.27  Pseudo
>>>>>>>...>>>>.............<<<<.>>>>>.................<<.<<<.........................>>.>>.......<<...<..<.....<<<<<<<.
TAAGTGG.TGGCTCAGT..GGTa.A..GAGCTTGGGACTAAGAgatttgctt.TTT.CTGTG....................GtCTCAGGTTCGAGCCTC..Gt.A.....TTGCTTAT lgXI.trna4-LeuAAG Sc: 23.26  
.>>>>>....>>>>.............<<<<..>>>>.................<<.<<...........................>>>>.......<<<..<.........<<<<<..
AGGTGG..TGGCTCAGT..GGTa.A..GAGCTTGGGACTAAGAggtttg....TTC.CCTC.......TGTG..........GtCTCAGGTTCGAGCCCT..G..T.g...GTTGCTCA scaffold40.trna4-LeuAAG Sc: 23.26  
AGGTGG..TGGCTCAGT..GGTa.A..GAGCTTGGGACTAAGAggtttg....TTC.CCTC.......TGTG..........GtCTCAGGTTCGAGCCCT..G..T.g...GTTGCTCA scaffold40.trna3-LeuAAG Sc: 23.26  
>>>>>>>...>>.>.............<.<<.>>>>>.................<<.<<<.........................>>>>>.......<<<..<..<.....<<<<<<<.
TAGGTGG.TGGCCCAGT..GGTa.A..GAGCTTGGGACCAAGAagtttgct..CTCtCTATG....................GtCCCAGGTTCGAACCCT..GtgG.....TTATTTAT lgXVII.trna6-LeuAAG Sc: 23.06  
.>>>>>....>>.>.............<.<<..>>>>.................<<.<<...........................>>>>.......<<<..<.........<<<<<..
AGGTGG..TGGCCCAGT..GGTa.A..GAGCTTGGGACTAAGGggtttg....CTC.CCTC.......TTAG..........GtCTCAGGTTCGAACCCT..G..T.g...GTCGCTCA scaffold1228.trna1-LeuAAG Sc: 22.96  
>>>..>....>>.>.............<.<<..>>>>.................<<.<<..........................>>>>>.......<<<..<..<......<..<<<.
GAGGTGG.TGGTCCAGT..GGTa.A..GAACTTGGGATTAAGAgattta....CTC.CCTC.......TATG..........GtCTCAGGTTCGAACCCT..Gt.G.....GTTGCTCA lgIX.trna18-LeuAAG Sc: 22.60  Pseudo
>>>>>>....>>>>.............<<<<.>>>>>.................<<.<<<..........................>>>>.......<<<..<.........<<<<<<.
GGGTGG..TGGTTCAGT..GGTa.A..GAATTTAGGACCAAGAagtttgctc.CTT.CTGTA....................AtCTCAGGTTCGAGCCCT..G..Tg....GTTGCTTA lgX.trna3-LeuAAG Sc: 22.56  Pseudo
>>.>>>....>>.>.............<.<<..>>>>.................<<.<<...........................>>>>.......<<<..<.........<<<.<<.
GATTGG..TGGCCCAGT..GGTa.A..GAGCTTGGGGCTAAGGggtttgctc.CCT.CTTAG....................GtCTCAGGTTCGAACCCT..G..Tg....GTCGCTCA lgIII.trna20-LeuAAG Sc: 22.53  
>>.>>>....>>.>.............<.<<.>>>>...................<.<<<.........................>>>>>.......<<<..<..<......<<<.<<.
TAATAGG.TGGCCCAGT..GGTa.A..GAGCTTGGGACTAAGAggtttattc.CCC.CTGCG....................GtCTCAGGTTCGAGCCCT..Gt.G.....GTTGCTAA scaffold455.trna1-LeuAAG Sc: 22.40  Pseudo
TAATAGG.TGGCCCAGT..GGTa.A..GAGCTTGGGACTAAGAggtttattc.CCC.CTGCG....................GtCTCAGGTTCGAGCCCT..Gt.G.....GTTGCTAA scaffold137.trna1-LeuAAG Sc: 22.40  Pseudo
>>>>>>....>>.>.............<.<<.>>>.>.................<..<<<.........................>>>>>.......<<<..<..<......<<<<<<.
TAGTAGG.TGGTCCAGT..GATa.A..GAACTTGGAACTAAGAgatttgctc.TTC.CTATG....................GtCTCAGGTTCGAGCCCT..Gt.G.....ATTGCTAA scaffold41.trna2-LeuAAG Sc: 21.93  
.>>>>>....>>>>.............<<<<..>>>>.................<<.<<...........................>>>>.......<<<..<.........<<<<<..
AGGTGG..TGGCTCAGT..GGTa.A..GAGCTTGGGACCAAGAgatttg....CTC.CCTC.......TGTG..........GtCTCAGGTTCGAGTCCT..G..T.g...GTTGCTCA lgXV.trna5-LeuAAG Sc: 21.71  
>>>>>>....>>>>.............<<<<..>>>>.................<<.<<..........................>>>>>.......<<<..<..<......<<<<<<.
TAGTAAG.TGACTCAGT..GGTa.A..GAGTTTGGGATCAAGGggtttg....CTC.CCCC.......TGTG..........GtCTCAGGTTCGAGTCCT..Gt.G.....GTTGCTAA lgXVIII.trna5-LeuAAG Sc: 21.56  
>>>>>>....>>.>.............<.<<.>>>>>.................<<.<<<.........................>>>.>.......<.<..<..<......<<<<<<.
TAGTAGG.TGGCCTAGT..GGTa.A..GAGCTTAGGATTAAGGggtttgct..CTC.CTGTG....................AtCTCAAGTTCGAACCAT..Gt.A.....GTTGCTGA lgI.trna46-LeuAAG Sc: 21.30  Pseudo
.>>>>>....>>>>.............<<<<..>>>>.................<<.<<...........................>>>>.......<<<..<.........<<<<<..
AGGTGG..TGGCTCAGT..GGTa.A..GAGTTTGGGACCAAGAggtttg....CTC.CCTC.......TGTG..........GtCTCAGGTTCGAATCCT..G..T.g...GTTGCTCA scaffold18780.trna1-LeuAAG Sc: 21.26  
AGGTGG..TGGCTCAGT..GGTa.A..GAGTTTGGGACCAAGAggtttg....CTC.CCTC.......TGTG..........GtCTCAGGTTCGAATCCT..G..T.g...GTTGCTCA scaffold168.trna1-LeuAAG Sc: 21.26  
AGGTGG..TGGCTCAGT..GGTa.A..GAGCTTGGGACCAAGAggtttg....CTC.CCTC.......TGTG..........GtCTCAGGTTCGAGTCCT..G..T.g...GTTGCTCA lgI.trna62-LeuAAG Sc: 21.07  
>>>>>>....>.>>.............<<.<.>>.>>.................<<..<<.........................>>>>>.......<<<..<..<......<<<<<<.
TAGCAAG.TGGCTCAGT..GGTa.A..GAATTTGAGATTAAGGagtttgctc.CTC.CTGTG....................GtTTCAGGTTCGAGCCCT..Ga.G.....GTTGCTAA scaffold107.trna1-LeuAAG Sc: 20.92  Pseudo
>>.>>.....>>.>.............<.<<..>>>>.................<<.<<...........................>>>>.......<<<..<..........<<.<<.
GGTCG...TGGCCCAGT..GGTa.A..GAGCTTGGGACTAAGAgatttg....CTC.CCTC.......TGTG..........GtCTCAGGTTCGAGCCCT..G..T.g...GTTGCTCA lgXII.trna20-LeuAAG Sc: 20.81  Pseudo
>>.>>>>...>>.>.............<.<<..>>>>.................<<.<<...........................>>>>.......<<<..<........<<<<.<<.
ATAGGTGgTGGCCCAGT..GGTa.A..GAGCTTGGGACTAAGGggtttg....CTC.CCTC.......TTAG..........GtCTCAGGTTCGAACCCT..G..T.gga.CGCTCATA scaffold2929.trna1-LeuAAG Sc: 20.73  
.>>>>>....>>>>.............<<<<.>..>>.................<<...<..........................>>>>.......<<<..<.........<<<<<..
AGGTGG..TGGCTCAGT..GGTa.A..GAGCTTG.GACTAAGAggtttgctccCTC.T.GTG....................GtCTCAGGTTCGAACCCT..G..Tg....GTTACTCA lgXII.trna1-LeuAAG Sc: 20.67  
>>.>>>....>>>>.............<<<<.>>>>>.................<<.<<<.........................>>>.>.......<.<..<..<......<<<.<<.
TAATAGG.TGGCTCCGT..GGTa.A..GAGCATGAGATTAAGAggtttgttt.TTC.TTATG....................GtCTCAAGTTCAAACCCT..Gt.G.....GTTGCTAA lgXIX.trna4-LeuAAG Sc: 20.58  
>>>>>>....>>.>.............<.<<..>>>>.................<<.<<..........................>>>>>.......<<<..<..<......<<<<<<.
TAGTAGG.TGGCCCAGT..GGTa.A..GAGTTTGAGACTAAGAggttta....CTC.TCCC.......TGTG..........GtCTCAGGTTTGAGCCCT..Gt.G.....GTTGCTAA scaffold87.trna2-LeuAAG Sc: 20.57  Pseudo
>>..>.....>>.>.............<.<<..>>>>.................<<.<<...........................>>>>.......<<<..<..........<..<<.
GGTGG...TGGCCCAGT..GGTa.A..GAGCTTGGGACTAAGAggtttg....CTC.CCTC.......TTAG..........GtCTCAGGTTCGAACCCT..G..T.g...GACGCTCA lgVI.trna20-LeuAAG Sc: 20.00  Pseudo


>>>>>>>...>>>...............<<<.>>>>>.................<<.<<<..>>................<<...>>>>>.......<<<..<..<.....<<<<<<<.
GTCAAGA.TGGCCGAGTT.GGTctA..AGGCGCCAGTTTCAGG..........TAC.TGGT.CCGA............AAGGG.CATGGGTTCGAATCCC..A..T.....TCTTGACA lgXVI.trna3-LeuCAG Sc: 68.57  
GTCAAGA.TGGCCGAGTT.GGTctA..AGGCGCCAGTTTCAGG..........TAC.TGGT.CCGA............AAGGG.CATGGGTTCGAATCCC..A..T.....TCTTGACA lgXVI.trna2-LeuCAG Sc: 68.57  
GTCAAGA.TGGCCGAGTT.GGTctA..AGGCGCCAGTTTCAGG..........TAC.TGGT.CCGA............AAGGG.CATGGGTTCGAATCCC..A..T.....TCTTGACA lgXV.trna4-LeuCAG Sc: 68.57  
GTCAAGA.TGGCCGAGTT.GGTctA..AGGCGCCAGTTTCAGG..........TAC.TGGT.CCGA............AAGGG.CATGGGTTCGAATCCC..A..T.....TCTTGACA lgVI.trna35-LeuCAG Sc: 68.57  
GTCAAGA.TGGCCGAGTT.GGTctA..AGGCGCCAGTTTCAGG..........TAC.TGGT.CCGA............AAGGG.CATGGGTTCGAATCCC..A..T.....TCTTGACA lgIV.trna6-LeuCAG Sc: 68.57  
GTCAAGA.TGGCCGAGCT.GGTctA..AGGCGCCAGTTTCAGG..........TAC.TGGT.CCGA............AAGGG.CATGGGTTCGAATCCC..A..T.....TCTTGACA lgXII.trna22-LeuCAG Sc: 66.12  

>>>>>>>...>>>...............<<<.>>>>>.................<<.<<<..>>>>............<<<<...>>>>>.......<<<..<..<.....<<<<<<<.
GGCAGCG.TGGCCGAGC..GGTctA..AGGCGCTGGTTTTAGG..........CAC.CAGT.CTCCC..........CGGAGA.CGTGGGTTCGAATCCC..A..C.....CGCTGTCA scaffold12679.trna5-LeuTAG Sc: 72.56  
>>>>>>>...>>>...............<<<.>>>>>.................<<.<<<..>>................<<...>>>>>.......<<<..<..<.....<<<<<<<.
GACAGTT.TGGCCGAGT..GGTctA..AGGCGCCAGATTTAGG..........CTC.TGGT.CCGA............AAGGG.CGTGGGTTCAAATCCC..A..C.....AGCTGTCA scaffold3963.trna2-LeuTAG Sc: 68.72  
GACAGTT.TGGCCGAGT..GGTctA..AGGCGCCAGATTTAGG..........CTC.TGGT.CCGA............AAGGG.CGTGGGTTCAAATCCC..A..C.....AGCTGTCA scaffold3963.trna1-LeuTAG Sc: 68.72  
GACAGTT.TGGCCGAGT..GGTctA..AGGCGCCAGATTTAGG..........CTC.TGGT.CCGA............AAGGG.CGTGGGTTCAAATCCC..A..C.....AGCTGTCA scaffold130.trna1-LeuTAG Sc: 68.72  
GACAGTT.TGGCCGAGT..GGTctA..AGGCGCCAGATTTAGG..........CTC.TGGT.CCGA............AAGGG.CGTGGGTTCAAATCCC..A..C.....AGCTGTCA lgXV.trna6-LeuTAG Sc: 68.72  
GACAGTT.TGGCCGAGT..GGTctA..AGGCGCCAGATTTAGG..........CTC.TGGT.CCGA............AAGGG.CGTGGGTTCAAATCCC..A..C.....AGCTGTCA lgXV.trna2-LeuTAG Sc: 68.72  
GACAGTT.TGGCCGAGT..GGTctA..AGGCGCCAGATTTAGG..........CTC.TGGT.CCGA............AAGGG.CGTGGGTTCAAATCCC..A..C.....AGCTGTCA lgXII.trna4-LeuTAG Sc: 68.72  
GACAGTT.TGGCCGAGT..GGTctA..AGGCGCCAGATTTAGG..........CTC.TGGT.CCGA............AAGGG.CGTGGGTTCAAATCCC..A..C.....AGCTGTCA lgV.trna16-LeuTAG Sc: 68.72  
GACAGTT.TGGCCGAGT..GGTctA..AGGCGCCAGATTTAGG..........CTC.TGGT.CCGA............AAGGG.CGTGGGTTCAAATCCC..A..C.....AGCTGTCA lgIX.trna7-LeuTAG Sc: 68.72  
GACAGTT.TGGCCGAGT..GGTctA..AGGCGCCAGATTTAGG..........CTC.TGGT.CCGA............AAGGG.CGTGGGTTCAAATCCC..A..C.....AGCTGTCA lgII.trna3-LeuTAG Sc: 68.72  
>>>>>>>...>>>...............<<<.>>>>>.................<<.<<<..>>>..............<<<...>>>>>.......<<<..<..<.....<<<<<<<.
GCCGCCA.TGGTGAAATC.GGT..Ag.ACACGCTGCTCTTAGG..........AAG.CAGT.GCTA............GAGCA.TCTCGGTTCGAGTCCG..A..G.....TGGCGGCA scaffold13864.trna1-LeuTAG Sc: 55.62  
GCCGCCA.TGGTGAAATC.GGT..Ag.ACACGCTGCTCTTAGG..........AAG.CAGT.GCTA............GAGCA.TCTCGGTTCGAGTCCG..A..G.....TGGCGGCA scaffold1199.trna1-LeuTAG Sc: 55.62  

>>>>>>>...>>>...............<<<.>>>>>.................<<.<<<..>>>>............<<<<...>>>>>.......<<<..<..<.....<<<<<<<.
GTCAGGA.TGGCCGAGT..GGTctA..AGGCGCCAGACTCAAG..........TTC.TGGT.CCTC..GTGA......GAGGG.CGTGGGTTCAAATCCC..A..C.....TTCTGACA lgV.trna17-LeuCAA Sc: 73.19  
GTCAGGA.TGGCCGAGT..GGTctA..AGGCGCCAGACTCAAG..........TTC.TGGT.CCTC..GTGA......GAGGG.CGTGGGTTCAAATCCC..A..C.....TTCTGACA lgIII.trna9-LeuCAA Sc: 73.19  
GTCAGGA.TGGCCGAGT..GGTctA..AGGCGCCAGACTCAAG..........TTC.TGGT.CCTC..GTGA......GAGGG.CGTGGGTTCAAATCCC..A..C.....TTCTGACA lgIII.trna33-LeuCAA Sc: 73.19  
GTCAGGA.TGGCCGAGT..GGTctA..AGGCGCCAGACTCAAG..........TTC.TGGT.CCTC..GTGA......GAGGG.CGTGGGTTCAAATCCC..A..C.....TTCTGACA lgIII.trna12-LeuCAA Sc: 73.19  
GTCAGGA.TGGCCGAGT..GGTctA..AGGCGCCAGACTCAAG..........TTC.TGGT.CCTC..GTGA......GAGGG.CGTGGGTTCAAATCCC..A..C.....TTCTGACA lgII.trna4-LeuCAA Sc: 73.19  
GTCAGGA.TGGCCGAGT..GGTctA..AGGCGCCAGACTCAAG..........TTC.TGGT.CCTC..GTGA......GAGGG.CGTGGGTTCAAATCCC..A..C.....TTCTGACA lgII.trna15-LeuCAA Sc: 73.19  
GTCAGGA.TGGCCGAGT..GGTctA..AGGCGCCAGACTCAAG..........TTC.TGGT.CCTC..GTGA......GAGGG.CGTGGGTTCAAATCCC..A..C.....TTCTGACA lgI.trna9-LeuCAA Sc: 73.19  
GTCAGGA.TGGCCGAGT..GGTctA..AGGCGCCAGACTCAAG..........TTC.TGGT.CTTC..GTGA......GAGGG.CGTGGGTTCAAATCCC..A..C.....TTCTGACA lgIII.trna36-LeuCAA Sc: 71.45  
GTCAGGA.TGGCCGAGT..GGTctA..AGGCGCCAGACTCAAG..........TTC.TGGT.CTTC..GTGA......GAGGG.CGTGGGTTCAAATCCC..A..C.....TTCTGACA lgI.trna53-LeuCAA Sc: 71.45  
GTCAGGA.TGGCCGAGT..GGTctA..AGGCGCCAGACTCAAG..........TTC.TGGT.CTTC..GAAA......GAGGG.CGTGGGTTCAAATCCC..A..C.....TTCTGACA lgVI.trna14-LeuCAA Sc: 70.82  
GTCAGGA.TGGCCGAGT..GGTctA..AGGCGCCAGACTCAAG..........TTC.TGGT.CTTCGA........GAGAGGG.CGTGGGTTCAAATCCC..A..C.....TTCTGACA lgVII.trna8-LeuCAA Sc: 70.52  
>>.>>>>...>>>...............<<<.>>>>>.................<<.<<<..>>>>............<<<<...>>>>>.......<<<..<..<.....<<<<.<<.
GTAAGGA.TGGCCGAGT..GGTctA..AGGCGCCAGACTCAAG..........TTC.TGGT.CCTC..GTGA......GAGGG.CGTGGGTTCAAATCCC..A..C.....TTCTGACA lgXII.trna13-LeuCAA Sc: 66.13  
>>>>>>>...>>>...............<<<.>>>>>.................<<.<<<..>>>..............<<<...>>>>>.......<<<..<..<.....<<<<<<<.