GtRNAdb

tRNAscan-SE Analysis of Mycobacterium tuberculosis CDC1551

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tRNAs Sorted by Genome Locusplain text version

Sequence
Name
tRNA
#
tRNA BoundstRNA
Isotype
AnticodonUpstream
Region
Downstream
Region
Intron BoundsScores First-Pass
Scanner
Begin EndBegin EndTotal (Cove) HMM2' Str
Mycobacterium_tuberculosis_CDC1551 1 10887 10963 Ile GAT    0 0 88.31 65.7322.58 Both
Mycobacterium_tuberculosis_CDC1551 2 11112 11187 Ala TGC    0 0 91.66 72.2419.42 Both
Mycobacterium_tuberculosis_CDC1551 3 25626 25711 Leu CAG    0 0 64.37 40.5923.78 Both
Mycobacterium_tuberculosis_CDC1551 4 659561 659644 Tyr GTA    0 0 60.56 32.7827.78 Both
Mycobacterium_tuberculosis_CDC1551 5 732939 733011 Thr GGT    0 0 77.85 52.6625.19 Both
Mycobacterium_tuberculosis_CDC1551 6 733048 733124 Met CAT    0 0 89.68 68.5321.15 Both
Mycobacterium_tuberculosis_CDC1551 7 734969 735041 Trp CCA    0 0 79.38 56.1823.20 Both
Mycobacterium_tuberculosis_CDC1551 8 923908 923984 Glu TTC    0 0 59.25 36.5722.68 Both
Mycobacterium_tuberculosis_CDC1551 9 924019 924095 Asp GTC    0 0 95.56 76.7418.82 Both
Mycobacterium_tuberculosis_CDC1551 10 924122 924198 Phe GAA    0 0 90.33 68.8121.52 Both
Mycobacterium_tuberculosis_CDC1551 11 1113550 1113625 Ala CGC    0 0 92.08 70.6821.40 Both
Mycobacterium_tuberculosis_CDC1551 12 1177442 1177515 Leu TAA    0 0 63.13 45.0218.11 Both
Mycobacterium_tuberculosis_CDC1551 13 1513943 1514026 Leu TAG    0 0 63.59 33.2530.34 Both
Mycobacterium_tuberculosis_CDC1551 14 1937415 1937488 Pro GGG    0 0 79.83 58.4421.39 Both
Mycobacterium_tuberculosis_CDC1551 15 2400679 2400767 Leu GAG    0 0 60.27 30.2929.98 Both
Mycobacterium_tuberculosis_CDC1551 16 2762387 2762457 Gly TCC    0 0 74.56 54.0220.54 Both
Mycobacterium_tuberculosis_CDC1551 17 2789664 2789737 Arg TCT    0 0 69.26 48.4020.86 Both
Mycobacterium_tuberculosis_CDC1551 18 2823342 2823417 His GTG    0 0 82.48 62.6419.84 Both
Mycobacterium_tuberculosis_CDC1551 19 2830982 2831054 Lys CTT    0 0 83.50 60.1023.40 Both
Mycobacterium_tuberculosis_CDC1551 20 2965897 2965972 Gly GCC    0 0 89.46 67.6421.82 Both
Mycobacterium_tuberculosis_CDC1551 21 2965999 2966072 Cys GCA    0 0 76.31 52.4223.89 Both
Mycobacterium_tuberculosis_CDC1551 22 2966086 2966160 Val GAC    0 0 87.89 63.8224.07 Both
Mycobacterium_tuberculosis_CDC1551 23 4118797 4118873 Pro CGG    0 0 76.17 53.5522.62 Both
Mycobacterium_tuberculosis_CDC1551 24 4160659 4160747 Ser GGA    0 0 65.42 41.9723.45 Both
Mycobacterium_tuberculosis_CDC1551 25 4214980 4214894 Ser TGA    0 0 65.11 34.0831.03 Both
Mycobacterium_tuberculosis_CDC1551 26 4209369 4209281 Ser GCT    0 0 56.66 24.1432.52 Both
Mycobacterium_tuberculosis_CDC1551 27 4209250 4209178 Arg ACG    0 0 74.09 53.6720.42 Both
Mycobacterium_tuberculosis_CDC1551 28 4191530 4191441 Ser CGA    0 0 68.38 32.2736.11 Both
Mycobacterium_tuberculosis_CDC1551 29 4073679 4073604 Thr CGT    0 0 91.14 64.5526.59 Both
Mycobacterium_tuberculosis_CDC1551 30 3554348 3554272 Met CAT    0 0 88.77 65.3523.42 Both
Mycobacterium_tuberculosis_CDC1551 31 3427703 3427631 Ala GGC    0 0 82.28 62.1120.17 Both
Mycobacterium_tuberculosis_CDC1551 32 3343108 3343037 Gln CTG    0 0 55.97 27.1928.78 Both
Mycobacterium_tuberculosis_CDC1551 33 3342997 3342922 Glu CTC    0 0 62.17 39.7622.41 Both
Mycobacterium_tuberculosis_CDC1551 34 2965712 2965638 Val CAC    0 0 80.53 57.5622.97 Both
Mycobacterium_tuberculosis_CDC1551 35 2762250 2762174 Pro TGG    0 0 89.79 67.9221.87 Both
Mycobacterium_tuberculosis_CDC1551 36 2615324 2615252 Asn GTT    0 0 78.73 54.8823.85 Both
Mycobacterium_tuberculosis_CDC1551 37 2577683 2577610 Met CAT    0 0 90.06 73.3616.70 Both
Mycobacterium_tuberculosis_CDC1551 38 2507942 2507868 Val TAC    0 0 79.93 59.3820.55 Both
Mycobacterium_tuberculosis_CDC1551 39 1818995 1818919 Leu CAA    0 0 56.45 34.7221.73 Both
Mycobacterium_tuberculosis_CDC1551 40 1445806 1445731 Arg CCG    0 0 78.92 58.8320.09 Both
Mycobacterium_tuberculosis_CDC1551 41 1138191 1138120 Gln TTG    0 0 49.46 20.9428.52 Both
Mycobacterium_tuberculosis_CDC1551 42 1025406 1025334 Arg CCT    0 0 74.23 50.1824.05 Both
Mycobacterium_tuberculosis_CDC1551 43 923784 923709 Lys TTT    0 0 82.20 64.4417.76 Both
Mycobacterium_tuberculosis_CDC1551 44 852854 852780 Thr TGT    0 0 77.79 54.4723.32 Both
Mycobacterium_tuberculosis_CDC1551 45 386334 386261 Gly CCC    0 0 73.32 51.8621.46 Both


The Genomic tRNA Database is curated by Todd Lowe and Patricia Chan. Please email lowe@soe.ucsc.edu with any questions and comments. To submit corrections, please use our Bug and Request Tracking System.