Genomic tRNA Database: Leishmania major (Version 5.0)

tRNAscan-SE Analysis of Leishmania major (Version 5.0)

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>> Genome Seq

Predicted tRNA Secondary Structures

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chr17.trna2 (344275-344347)	Length: 73 bp
Type: Ala	Anticodon: AGC at 34-36 (344308-344310)	Score: 60.04
Seq: GGGGATGTAGCTCAGATGGTAGAGCGACCGCTTAGCATGCGGTAGGtATTGGGATCGATACCCAACTTCTCCA
Str: >>>>>.>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<.<<<<<.

chr31.trna1 (203939-204011)	Length: 73 bp
Type: Ala	Anticodon: AGC at 34-36 (203972-203974)	Score: 60.04
Seq: GGGGATGTAGCTCAGATGGTAGAGCGACCGCTTAGCATGCGGTAGGtATTGGGATCGATACCCAACTTCTCCA
Str: >>>>>.>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<.<<<<<.

chr11.trna1 (157119-157190)	Length: 72 bp
Type: Ala	Anticodon: CGC at 33-35 (157151-157153)	Score: 70.10
Seq: GGGCGTGTAGCTCAGTGGTAGAGCGTCCGTTTCGCATACGGAAGGcCTAGGGTTCGATCCCCTACTCGTCCA
Str: >>>>>.>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<.<<<<<.

chr11.trna6 (162800-162729)	Length: 72 bp
Type: Ala	Anticodon: CGC at 33-35 (162768-162766)	Score: 70.10
Seq: GGGCGTGTAGCTCAGTGGTAGAGCGTCCGTTTCGCATACGGAAGGcCTAGGGTTCGATCCCCTACTCGTCCA
Str: >>>>>.>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<.<<<<<.

chr33.trna1 (106939-107010)	Length: 72 bp
Type: Ala	Anticodon: TGC at 33-35 (106971-106973)	Score: 68.42
Seq: GGGCGTGTAGCTCAGTGGTAGAGCGCCTGTTTTGCATACAGGAGGcCTAGGGTTCAAACCCCTACTCGTCCA
Str: >>>>>.>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<.<<<<<.

chr11.trna4 (381490-381561)	Length: 72 bp
Type: Arg	Anticodon: ACG at 33-35 (381522-381524)	Score: 70.89
Seq: GTCCGTGTGGCTCAATGGAAGAGCATCTGACTACGGATCAGAGGGtTGCAGGTTCGAATCCTGTCACGGATG
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr23.trna8 (225817-225746)	Length: 72 bp
Type: Arg	Anticodon: ACG at 33-35 (225785-225783)	Score: 70.89
Seq: GTCCGTGTGGCTCAATGGAAGAGCATCTGACTACGGATCAGAGGGtTGCAGGTTCGAATCCTGTCACGGATG
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr5.trna1 (359954-360025)	Length: 72 bp
Type: Arg	Anticodon: ACG at 33-35 (359986-359988)	Score: 70.89
Seq: GTCCGTGTGGCTCAATGGAAGAGCATCTGACTACGGATCAGAGGGtTGCAGGTTCGAATCCTGTCACGGATG
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr7.trna1 (381478-381407)	Length: 72 bp
Type: Arg	Anticodon: ACG at 33-35 (381446-381444)	Score: 70.89
Seq: GTCCGTGTGGCTCAATGGAAGAGCATCTGACTACGGATCAGAGGGtTGCAGGTTCGAATCCTGTCACGGATG
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr9.trna5 (418949-419020)	Length: 72 bp
Type: Arg	Anticodon: CCG at 33-35 (418981-418983)	Score: 65.42
Seq: GACGTTGTGGCGCAATGGAAGCGCGTCGGATTCCGGATCCGAAGGtTGTGGGTTCGACCCCCATCAGCGTTG
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr33.trna4 (106730-106658)	Length: 73 bp
Type: Arg	Anticodon: CCT at 34-36 (106697-106695)	Score: 78.04
Seq: GCCCTTGTAGCCTAATGGAtATGGCGTTTGCTTCCTAAGCAAAAGGtTGCGGGTTCGAGTCCCGCCAGGGGTA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr23.trna2 (226329-226400)	Length: 72 bp
Type: Arg	Anticodon: TCG at 33-35 (226361-226363)	Score: 73.56
Seq: GGCCTCTTGGCGCAATGGAAGCGCATCAGACTTCGGATCTGAGGGtTGCAGGTTCGAGTCCTGCAGGGGTCG
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr33.trna3 (106862-106790)	Length: 73 bp
Type: Arg	Anticodon: TCT at 34-36 (106829-106827)	Score: 75.36
Seq: GCTCCAGTGGCCTAACGGAtAAGGCTTTGGACTTCTAATCCAAAGAtTGCGGGTTCGAATCCCGCCTGGAGTA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr10.trna2 (533396-533324)	Length: 73 bp
Type: Asn	Anticodon: GTT at 34-36 (533363-533361)	Score: 79.10
Seq: TCCTCCCTGGCGCAGTCGGCAGCGCGTTAGGCTGTTAACCTACAGGtCGTTGGTTCGAATCCAACGGGAGGAG
Str: >>>>>>>..>>>>........<<<<..>>>>.......<<<<......>>>>>.......<<<<<<<<<<<<.

chr34.trna5 (1535020-1535092)	Length: 73 bp
Type: Asn	Anticodon: GTT at 34-36 (1535053-1535055)	Score: 79.10
Seq: TCCTCCCTGGCGCAGTCGGCAGCGCGTTAGGCTGTTAACCTACAGGtCGTTGGTTCGAATCCAACGGGAGGAG
Str: >>>>>>>..>>>>........<<<<..>>>>.......<<<<......>>>>>.......<<<<<<<<<<<<.

chr34.trna8 (1534525-1534453)	Length: 73 bp
Type: Asn	Anticodon: GTT at 34-36 (1534492-1534490)	Score: 79.10
Seq: TCCTCCCTGGCGCAGTCGGCAGCGCGTTAGGCTGTTAACCTACAGGtCGTTGGTTCGAATCCAACGGGAGGAG
Str: >>>>>>>..>>>>........<<<<..>>>>.......<<<<......>>>>>.......<<<<<<<<<<<<.

chr15.trna1 (322953-323024)	Length: 72 bp
Type: Asp	Anticodon: GTC at 34-36 (322986-322988)	Score: 78.09
Seq: TTCTCGGTAGTATAGTGGTtAGTATACCCGCCTGTCACGCGGGTGACCCGGGTTCAATTCCCGGCCGGGAAG
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.

chr17.trna3 (344055-343984)	Length: 72 bp
Type: Asp	Anticodon: GTC at 34-36 (344022-344020)	Score: 78.09
Seq: TTCTCGGTAGTATAGTGGTtAGTATACCCGCCTGTCACGCGGGTGACCCGGGTTCAATTCCCGGCCGGGAAG
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.

chr24.trna5 (681062-680991)	Length: 72 bp
Type: Asp	Anticodon: GTC at 34-36 (681029-681027)	Score: 78.09
Seq: TTCTCGGTAGTATAGTGGTtAGTATACCCGCCTGTCACGCGGGTGACCCGGGTTCAATTCCCGGCCGGGAAG
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.

chr36.trna5 (2469004-2469075)	Length: 72 bp
Type: Cys	Anticodon: GCA at 33-35 (2469036-2469038)	Score: 75.22
Seq: GGATTCATAGCTCAGTGGTAGAGCATTCGGCTGCAGTCCGAATGGtCCCCGGTTCAAACCCGGGTGGGTCCT
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr16.trna1 (455507-455436)	Length: 72 bp
Type: Gln	Anticodon: CTG at 34-36 (455474-455472)	Score: 70.34
Seq: GCTCCTATAGTGTAGCGGTtATCACCTCGGACTCTGAATCCGATAACCCTGGTTCGAGTCCAGGTAGGAGTG
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.

chr24.trna2 (621500-621571)	Length: 72 bp
Type: Gln	Anticodon: CTG at 34-36 (621533-621535)	Score: 70.34
Seq: GCTCCTATAGTGTAGCGGTtATCACCTCGGACTCTGAATCCGATAACCCTGGTTCGAGTCCAGGTAGGAGTG
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.

chr36.trna9 (1607734-1607663)	Length: 72 bp
Type: Gln	Anticodon: CTG at 34-36 (1607701-1607699)	Score: 70.34
Seq: GCTCCTATAGTGTAGCGGTtATCACCTCGGACTCTGAATCCGATAACCCTGGTTCGAGTCCAGGTAGGAGTG
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.

chr23.trna9 (225498-225427)	Length: 72 bp
Type: Gln	Anticodon: TTG at 34-36 (225465-225463)	Score: 81.95
Seq: GGTCCTATAGTGTAGTGGTtATCACTTCGGACTTTGAATCCGAAAACCCAGGTTCGAATCCTGGTAGGACCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.

chr15.trna2 (323136-323065)	Length: 72 bp
Type: Glu	Anticodon: CTC at 34-36 (323103-323101)	Score: 69.92
Seq: TCCGATGTGGTATAGTGGAtAGAACAAGCGGCTCTCACCCGCTAGACCCGGGTTCGATCCCCGGCATCGGAA
Str: >>>>>>>..>>.>........<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.

chr31.trna5 (494829-494758)	Length: 72 bp
Type: Glu	Anticodon: CTC at 34-36 (494796-494794)	Score: 69.92
Seq: TCCGATGTGGTATAGTGGAtAGAACAAGCGGCTCTCACCCGCTAGACCCGGGTTCGATCCCCGGCATCGGAA
Str: >>>>>>>..>>.>........<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.

chr9.trna8 (418562-418491)	Length: 72 bp
Type: Glu	Anticodon: TTC at 34-36 (418529-418527)	Score: 65.42
Seq: TCCGATGTAGTATAACGGTtAGAACACCTGGCTTTCACCCAGGAGATCCGGGTTCGATTCCCGGTATCGGAG
Str: >>>>>>>..>>.>........<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.

chr11.trna2 (157252-157322)	Length: 71 bp
Type: Gly	Anticodon: CCC at 33-35 (157284-157286)	Score: 74.97
Seq: GCGCCGCTGGTCTAGTGGCATGATGGTACCCTCCCAAGGTATTGACCCGGGTTCGATTCCCGGGCGGCGCA
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.

chr10.trna3 (533267-533197)	Length: 71 bp
Type: Gly	Anticodon: GCC at 33-35 (533235-533233)	Score: 75.20
Seq: GCGCAGTTGGTCTAGTGGTAGAATTCTCGCCTGCCACGCGGGAGGCCCGGGTTCGATTCCCGGACTGCGCA
Str: >>>>>>>..>>.>.......<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.

chr31.trna2 (494642-494712)	Length: 71 bp
Type: Gly	Anticodon: GCC at 33-35 (494674-494676)	Score: 75.20
Seq: GCGCAGTTGGTCTAGTGGTAGAATTCTCGCCTGCCACGCGGGAGGCCCGGGTTCGATTCCCGGACTGCGCA
Str: >>>>>>>..>>.>.......<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.

chr36.trna10 (1033437-1033367)	Length: 71 bp
Type: Gly	Anticodon: GCC at 33-35 (1033405-1033403)	Score: 75.20
Seq: GCGCAGTTGGTCTAGTGGTAGAATTCTCGCCTGCCACGCGGGAGGCCCGGGTTCGATTCCCGGACTGCGCA
Str: >>>>>>>..>>.>.......<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.

chr36.trna3 (1032519-1032589)	Length: 71 bp
Type: Gly	Anticodon: GCC at 33-35 (1032551-1032553)	Score: 75.20
Seq: GCGCAGTTGGTCTAGTGGTAGAATTCTCGCCTGCCACGCGGGAGGCCCGGGTTCGATTCCCGGACTGCGCA
Str: >>>>>>>..>>.>.......<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.

chr23.trna5 (226897-226826)	Length: 72 bp
Type: Gly	Anticodon: TCC at 34-36 (226864-226862)	Score: 69.57
Seq: GCAATTGTGGTCCAACGGTtAAGATCCCCGCCTTCCAAGCGGGTGACCCGGGTTCGACTCCCGGCAATTGCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.

chr9.trna4 (405864-405934)	Length: 71 bp
Type: His	Anticodon: GTG at 33-35 (405896-405898)	Score: 59.58
Seq: GGGGAAATAGTTCAGTGGCAGAACATCAGATTGTGGCTCTGAATACCCGGGTCCGATTCCCGGTTTCCCCT
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.

chr9.trna6 (419087-419157)	Length: 71 bp
Type: His	Anticodon: GTG at 33-35 (419119-419121)	Score: 59.58
Seq: GGGGAAATAGTTCAGTGGCAGAACATCAGATTGTGGCTCTGAATACCCGGGTCCGATTCCCGGTTTCCCCT
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.

chr24.trna3 (621952-622025)	Length: 74 bp
Type: Ile	Anticodon: AAT at 35-37 (621986-621988)	Score: 80.15
Seq: GCTCTCATAGCTCAGTCGGTtAGAGCGTGGGTCTAATAAGCCCAAGGtCACAGGTTCGACCCCTGTTGGGAGCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr24.trna4 (623347-623420)	Length: 74 bp
Type: Ile	Anticodon: AAT at 35-37 (623381-623383)	Score: 80.15
Seq: GCTCTCATAGCTCAGTCGGTtAGAGCGTGGGTCTAATAAGCCCAAGGtCACAGGTTCGACCCCTGTTGGGAGCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr34.trna1 (470433-470506)	Length: 74 bp
Type: Ile	Anticodon: AAT at 35-37 (470467-470469)	Score: 80.15
Seq: GCTCTCATAGCTCAGTCGGTtAGAGCGTGGGTCTAATAAGCCCAAGGtCACAGGTTCGACCCCTGTTGGGAGCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr23.trna1 (225169-225242)	Length: 74 bp
Type: Ile	Anticodon: TAT at 35-37 (225203-225205)	Score: 81.51
Seq: GCTCCCGTGGTCTAGTTGGTtAGGACGCTGGTCTTATGAACCGGATGtCGCGGGTTCGAGCCCCGCCGGGAGCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr11.trna3 (162874-162955)	Length: 82 bp
Type: Leu	Anticodon: AAG at 35-37 (162908-162910)	Score: 66.27
Seq: GGTGAGATGGTCGAGTGGTctAAGACGTTGGATTAAGGTTCCAATCCTTTCGAGGGCGTGGGTTCAAACCCCACTCTCATCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>..<<<<..>>>>>.......<<<<<<<<<<<<.

chr11.trna7 (157045-156964)	Length: 82 bp
Type: Leu	Anticodon: AAG at 35-37 (157011-157009)	Score: 66.27
Seq: GGTGAGATGGTCGAGTGGTctAAGACGTTGGATTAAGGTTCCAATCCTTTCGAGGGCGTGGGTTCAAACCCCACTCTCATCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>..<<<<..>>>>>.......<<<<<<<<<<<<.

chr36.trna8 (2469947-2469866)	Length: 82 bp
Type: Leu	Anticodon: AAG at 35-37 (2469913-2469911)	Score: 66.27
Seq: GGTGAGATGGTCGAGTGGTctAAGACGTTGGATTAAGGTTCCAATCCTTTCGAGGGCGTGGGTTCAAACCCCACTCTCATCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>..<<<<..>>>>>.......<<<<<<<<<<<<.

chr29.trna2 (819759-819678)	Length: 82 bp
Type: Leu	Anticodon: CAA at 35-37 (819725-819723)	Score: 73.13
Seq: GGCAGGATGGCCGAGTGGTctAAGGCGGGAGACTCAAGTTCTCTTCTATTCGTAGGCGCGGGTTCGAACCCCGCTCCTGTCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>..<<<<..>>>>>.......<<<<<<<<<<<<.

chr23.trna7 (226124-226042)	Length: 83 bp
Type: Leu	Anticodon: CAG at 35-37 (226090-226088)	Score: 72.97
Seq: GGCAAGATGGTCGAGTGGTctAAGACGTCACGTTCAGGTCGTGATCTCCCCTGGAGGCGTGGGTTCAAACCCCACTCTTGTCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<.

chr9.trna2 (277210-277292)	Length: 83 bp
Type: Leu	Anticodon: CAG at 35-37 (277244-277246)	Score: 72.97
Seq: GGCAAGATGGTCGAGTGGTctAAGACGTCACGTTCAGGTCGTGATCTCCCCTGGAGGCGTGGGTTCAAACCCCACTCTTGTCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<.

chr24.trna6 (621866-621785)	Length: 82 bp
Type: Leu	Anticodon: TAA at 36-38 (621831-621829)	Score: 56.87
Seq: GCTGGGGTTCCCGAGTTGGTcaAAGGGGTGAGACTTAAGTTCTCATGCGCAAGCTTCGTGGGTTCGAACCCCACCTCCAGCA
Str: >>>>>>>..>>>............<<<.>>>>>.......<<<<<...>>..<<...>>>>>.......<<<<<<<<<<<<.

chr34.trna9 (470755-470676)	Length: 80 bp
Type: Leu	Anticodon: TAG at 35-37 (470721-470719)	Score: 73.76
Seq: GGCGGAGTGGCCGAGTGGTctAAGGCGCCAGATTTAGGCTCTGGTCTTTCGAGGCGTGGGTTCGAACCCCACCTCCGTCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>..<<<..>>>>>.......<<<<<<<<<<<<.

chr10.trna1 (533082-533154)	Length: 73 bp
Type: Lys	Anticodon: CTT at 34-36 (533115-533117)	Score: 84.21
Seq: GCATTCCTAGCTCAGTCGGTAGAGCGCACGGCTCTTAACCGTGTGGtCGTGGGTTCGATCCCCACGGAGTGCG
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr21.trna3 (443143-443215)	Length: 73 bp
Type: Lys	Anticodon: CTT at 34-36 (443176-443178)	Score: 84.21
Seq: GCATTCCTAGCTCAGTCGGTAGAGCGCACGGCTCTTAACCGTGTGGtCGTGGGTTCGATCCCCACGGAGTGCG
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr3.trna1 (259317-259389)	Length: 73 bp
Type: Lys	Anticodon: CTT at 34-36 (259350-259352)	Score: 84.21
Seq: GCATTCCTAGCTCAGTCGGTAGAGCGCACGGCTCTTAACCGTGTGGtCGTGGGTTCGATCCCCACGGAGTGCG
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr23.trna3 (226715-226787)	Length: 73 bp
Type: Lys	Anticodon: TTT at 34-36 (226748-226750)	Score: 78.85
Seq: GCACTCCTAGCTCAGTTGGTAGAGCGCGTGGCTTTTAACCTCGTGGtCGTGGGTTCGAGCCCCACGGAGTGCG
Str: >>>>>>>..>>>>........<<<<.>>.>>.......<<.<<.....>>>>>.......<<<<<<<<<<<<.

chr11.trna5 (381413-381341)	Length: 73 bp
Type: Met	Anticodon: CAT at 34-36 (381380-381378)	Score: 73.12
Seq: GCGAGCGTAGCGCAGTCGGCAGCGCGTGGGTCTCATAATCCCAAGGtCGTGAGTTCGATCCTCACCGGTCGCA
Str: >>>>.>>..>>>>........<<<<.>>>>.........<<<<.....>>>>>.......<<<<<<<.<<<<.

chr34.trna2 (470568-470640)	Length: 73 bp
Type: Met	Anticodon: CAT at 34-36 (470601-470603)	Score: 73.12
Seq: GCGAGCGTAGCGCAGTCGGCAGCGCGTGGGTCTCATAATCCCAAGGtCGTGAGTTCGATCCTCACCGGTCGCA
Str: >>>>.>>..>>>>........<<<<.>>>>.........<<<<.....>>>>>.......<<<<<<<.<<<<.

chr36.trna7 (2470081-2470010)	Length: 72 bp
Type: Met	Anticodon: CAT at 33-35 (2470049-2470047)	Score: 75.16
Seq: AGCACCGTAGCGCAGTGGAAGCGCGATGGGCTCATAACCCATAGGtCGTTGGATCGAAACCAATCGGTGCTA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr9.trna1 (277080-277151)	Length: 72 bp
Type: Met	Anticodon: CAT at 33-35 (277112-277114)	Score: 75.16
Seq: AGCACCGTAGCGCAGTGGAAGCGCGATGGGCTCATAACCCATAGGtCGTTGGATCGAAACCAATCGGTGCTA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr31.trna3 (1315562-1315634)	Length: 73 bp
Type: Phe	Anticodon: GAA at 34-36 (1315595-1315597)	Score: 86.47
Seq: GCCGCGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGtCCCTGGTTCGATCCCGGGTCGCGGCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr9.trna9 (406187-406115)	Length: 73 bp
Type: Phe	Anticodon: GAA at 34-36 (406154-406152)	Score: 86.47
Seq: GCCGCGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGtCCCTGGTTCGATCCCGGGTCGCGGCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr21.trna1 (442784-442855)	Length: 72 bp
Type: Pro	Anticodon: AGG at 33-35 (442816-442818)	Score: 71.70
Seq: GGTCCAGTGGTCTAGTGGCATGATTCTCCCTTAGGGTGGGAGAGGtCCCGGGTTCAATTCCCGGCTGGACCC
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr36.trna4 (1033511-1033582)	Length: 72 bp
Type: Pro	Anticodon: AGG at 33-35 (1033543-1033545)	Score: 71.70
Seq: GGTCCAGTGGTCTAGTGGCATGATTCTCCCTTAGGGTGGGAGAGGtCCCGGGTTCAATTCCCGGCTGGACCC
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr24.trna1 (205318-205389)	Length: 72 bp
Type: Pro	Anticodon: CGG at 33-35 (205350-205352)	Score: 74.75
Seq: GGCCGCTTGGTCTAGTGGTATGATTCCCGCTTCGGGTGCGGGAGGtCAGGGGTTCAATTCCCCTAGCGGCCC
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr34.trna4 (1534885-1534956)	Length: 72 bp
Type: Pro	Anticodon: CGG at 33-35 (1534917-1534919)	Score: 74.75
Seq: GGCCGCTTGGTCTAGTGGTATGATTCCCGCTTCGGGTGCGGGAGGtCAGGGGTTCAATTCCCCTAGCGGCCC
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr36.trna6 (2470154-2470225)	Length: 72 bp
Type: Pro	Anticodon: TGG at 33-35 (2470186-2470188)	Score: 71.29
Seq: GGTCGTTTGGTCTAGTGGTATGATTCCTGTTTTGGGTACAGGAGGtCACGGGTTCAATTCCCGTAACGACCC
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr33.trna2 (600715-600643)	Length: 73 bp
Type: Lys	Anticodon: CTT at 34-36 (600682-600680)	Score: 35.04
Seq: GCATTGCTAGCTGAGTCGGTGGGGCGTATGGCTCTTAAGCGTGTGGcTGTGGGTTCGATCCCCATGGAGTGCG
Str: >>>>>.>..>>>..........<<<.>>>>.........<<<<.....>>>>>.......<<<<<<.<<<<<.

chr31.trna4 (1315767-1315687)	Length: 81 bp
Type: Ser	Anticodon: AGA at 34-36 (1315734-1315732)	Score: 72.93
Seq: GTCACCATACCCAAGTGGTtACGGGGACTGACTAGAAATCAGTTGCGATCTCGCGCGCAGGTTCGAATCCTGCTGGTGACG
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>..<<<<..>>>>>.......<<<<<<<<<<<<.

chr29.trna1 (819898-819818)	Length: 81 bp
Type: Ser	Anticodon: CGA at 34-36 (819865-819863)	Score: 72.54
Seq: GTCACCATACCCAAGTGGTtACGGGGGTTGACTCGAAATCAACTGCGATCTCGCGCGCAGGTTCGAATCCTGCTGGTGACG
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>..<<<<..>>>>>.......<<<<<<<<<<<<.

chr17.trna1 (344133-344213)	Length: 81 bp
Type: Ser	Anticodon: GCT at 34-36 (344166-344168)	Score: 75.67
Seq: GCAAATGTGGCCGAGTGGTtAAGGCGCCTGCCTGCTAAGCAGGTGTGATCTCACGCGAAGGTTCGAACCCTTCCGTTTGCG
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>..<<<<..>>>>>.......<<<<<<<<<<<<.

chr21.trna4 (160152-160072)	Length: 81 bp
Type: Ser	Anticodon: GCT at 34-36 (160119-160117)	Score: 77.56
Seq: GCAAACGTGGCCGAGTGGTtAAGGCGCCTGCCTGCTAAGCAGGTGTGATCTCACGCGAAGGTTCGAACCCTTCCGTTTGCG
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>..<<<<..>>>>>.......<<<<<<<<<<<<.

chr34.trna3 (470830-470910)	Length: 81 bp
Type: Ser	Anticodon: TGA at 34-36 (470863-470865)	Score: 72.53
Seq: GTCAACATACCCAAGTGGTtACGGGGTTTGACTTGAAATCAAATGCGATCTCGCGCGCAGGTTCGAACCCTGCTGTTGACG
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>..<<<<..>>>>>.......<<<<<<<<<<<<.

chr36.trna1 (492633-492704)	Length: 72 bp
Type: Thr	Anticodon: AGT at 33-35 (492665-492667)	Score: 71.69
Seq: GGCTGCTTAGCTCAATGGCAGAGCGCCGTCCTAGTAAGACGGAGGtCAGGGGTTCGATCCCCCTAGCGGCCT
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr36.trna11 (1033304-1033233)	Length: 72 bp
Type: Thr	Anticodon: AGT at 33-35 (1033272-1033270)	Score: 71.69
Seq: GGCTGCTTAGCTCAATGGCAGAGCGCCGTCCTAGTAAGACGGAGGtCAGGGGTTCGATCCCCCTAGCGGCCT
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr36.trna12 (491808-491737)	Length: 72 bp
Type: Thr	Anticodon: AGT at 33-35 (491776-491774)	Score: 71.69
Seq: GGCTGCTTAGCTCAATGGCAGAGCGCCGTCCTAGTAAGACGGAGGtCAGGGGTTCGATCCCCCTAGCGGCCT
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr30.trna1 (798305-798234)	Length: 72 bp
Type: Thr	Anticodon: CGT at 33-35 (798273-798271)	Score: 73.34
Seq: GGCCGCTTAGCACAGTGGCAGTGCACCACTCTCGTAAAGTGGGGGtCGCGAGTTCGATTCTCGCAGTGGCCT
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr34.trna6 (1534803-1534732)	Length: 72 bp
Type: Thr	Anticodon: CGT at 33-35 (1534771-1534769)	Score: 73.34
Seq: GGCCGCTTAGCACAGTGGCAGTGCACCACTCTCGTAAAGTGGGGGtCGCGAGTTCGATTCTCGCAGTGGCCT
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr23.trna6 (226256-226185)	Length: 72 bp
Type: Thr	Anticodon: TGT at 33-35 (226224-226222)	Score: 74.23
Seq: GGCCGCTTAGCACAGTGGCAGTGCACTGGTCTTGTAAACCAGGGGtCCCGAGTTCAATTCTCGGAGTGGCCT
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr23.trna4 (226973-227044)	Length: 72 bp
Type: Trp	Anticodon: CCA at 33-35 (227005-227007)	Score: 70.81
Seq: GGGGGCTTAGCTCAGTGGTAGAGCATTGGATTCCAAATCCAGGGGtCGTAGGTTCAATCCCTGCAGCTCTCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr34.trna7 (1534667-1534584)	Length: 84 bp
Type: Tyr	Anticodon: GTA at 34-36 (1534634-1534632)	Score: 69.74
Possible intron: 38-48 (1534630-1534620)
Seq: CCTTCTGTAGCTCAATTGGTAGAGCATGTGACTGTAGagttcgcaggtATCACAGGGtCGCTGGTTCGATTCCGGCCGGAAGGA
Str: >>>>>>>..>>>>........<<<<.>>>>>..................<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr36.trna13 (491656-491573)	Length: 84 bp
Type: Tyr	Anticodon: GTA at 34-36 (491623-491621)	Score: 69.10
Possible intron: 38-48 (491619-491609)
Seq: CCTTCTGTAGCTCAATTGGTAGAGCATGTGACTGTAGagttcgcgggtATCACAGGGtCGCTGGTTCGATTCCGGCCGGAAGGA
Str: >>>>>>>..>>>>........<<<<.>>>>>..................<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr36.trna2 (492788-492871)	Length: 84 bp
Type: Tyr	Anticodon: GTA at 34-36 (492821-492823)	Score: 69.10
Possible intron: 38-48 (492825-492835)
Seq: CCTTCTGTAGCTCAATTGGTAGAGCATGTGACTGTAGagttcgcgggtATCACAGGGtCGCTGGTTCGATTCCGGCCGGAAGGA
Str: >>>>>>>..>>>>........<<<<.>>>>>..................<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr21.trna2 (443007-443080)	Length: 74 bp
Type: Val	Anticodon: AAC at 35-37 (443041-443043)	Score: 68.41
Seq: GCGCGGTTGGTCTAGGTGGTtATGACGTCGCTTTAACACGGCGAAGGtCTCGGGTTCGAGTCCCGAACTGCGTA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr34.trna10 (470199-470126)	Length: 74 bp
Type: Val	Anticodon: AAC at 35-37 (470165-470163)	Score: 68.41
Seq: GCGCGGTTGGTCTAGGTGGTtATGACGTCGCTTTAACACGGCGAAGGtCTCGGGTTCGAGTCCCGAACTGCGTA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr9.trna3 (405537-405609)	Length: 73 bp
Type: Val	Anticodon: CAC at 34-36 (405570-405572)	Score: 70.56
Seq: GCGATGGTCGTCTAGTGGTtAGGACATTCGCCTCACACGCGAGAGAtCGCGGGTTCAATCCCCGCCCGTCGTA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr9.trna7 (418874-418802)	Length: 73 bp
Type: Val	Anticodon: CAC at 34-36 (418841-418839)	Score: 70.56
Seq: GCGATGGTCGTCTAGTGGTtAGGACATTCGCCTCACACGCGAGAGAtCGCGGGTTCAATCCCCGCCCGTCGTA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr23.trna10 (225359-225287)	Length: 73 bp
Type: Val	Anticodon: TAC at 34-36 (225326-225324)	Score: 72.15
Seq: GCGTGGGTGATCTAGTGGTtATGATGTCTGCTTTACACGCAGAACGtCGCGGGTTCGAACCCCGCCCCGCGTA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

The Genomic tRNA Database is curated by Todd Lowe and Patricia Chan. Please email lowe@soe.ucsc.edu with any questions and comments. To submit corrections, please use our Bug and Request Tracking System.