tRNAscan-SE Analysis of the Lactococcus lactis Genome
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| Predicted tRNA Secondary Structures |
Click on "View tRNA" buttons to view 2-D tRNA structures
Cove-predicted tRNA secondary structures rendered by
NAVIEW (c) 1988 Robert E. Bruccoleri
chr.trna15 (539202-539274) Length: 73 bp
Type: Ala Anticodon: TGC at 34-36 (539235-539237) Score: 84.64
Seq: GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGtCAGCGGTTCGATCCCGCTAGGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna33 (2363444-2363372) Length: 73 bp
Type: Ala Anticodon: TGC at 34-36 (2363411-2363409) Score: 84.64
Seq: GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGtCAGCGGTTCGATCCCGCTAGGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna36 (2344265-2344193) Length: 73 bp
Type: Ala Anticodon: TGC at 34-36 (2344232-2344230) Score: 84.64
Seq: GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGtCAGCGGTTCGATCCCGCTAGGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna44 (2264034-2263962) Length: 73 bp
Type: Ala Anticodon: TGC at 34-36 (2264001-2263999) Score: 84.64
Seq: GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGtCAGCGGTTCGATCCCGCTAGGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna45 (2221522-2221450) Length: 73 bp
Type: Ala Anticodon: TGC at 34-36 (2221489-2221487) Score: 84.64
Seq: GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGtCAGCGGTTCGATCCCGCTAGGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna48 (1984461-1984389) Length: 73 bp
Type: Ala Anticodon: TGC at 34-36 (1984428-1984426) Score: 84.64
Seq: GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGtCAGCGGTTCGATCCCGCTAGGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna22 (543091-543164) Length: 74 bp
Type: Arg Anticodon: ACG at 35-37 (543125-543127) Score: 73.18
Seq: GCAGGCGTGGCTCAACTGGAtAGAGTACCTGACTACGAATCAGGCGGtTGTAGGTTCGAATCCTACCGCTTGCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna9 (282716-282789) Length: 74 bp
Type: Arg Anticodon: ACG at 35-37 (282750-282752) Score: 73.18
Seq: GCAGGCGTGGCTCAACTGGAtAGAGTACCTGACTACGAATCAGGCGGtTGTAGGTTCGAATCCTACCGCTTGCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna30 (617800-617871) Length: 72 bp
Type: Arg Anticodon: CCG at 34-36 (617833-617835) Score: 54.50
Seq: GCGTCCGTAGTGTAATGGAtATCACGTAAGATTCCGGTTCTTGAGATGGGGGTTCGATTCCCTCCGGACGCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.
chr.trna32 (1711201-1711273) Length: 73 bp
Type: Arg Anticodon: CCT at 35-37 (1711235-1711237) Score: 58.19
Seq: GGTCTCTTAGTTAAATTGGAtATAACTACTGCCTCCTAAGCAGTGAtTGCCAGTTCGATTCTGGCAGGGGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.
chr.trna12 (447083-447156) Length: 74 bp
Type: Arg Anticodon: TCT at 35-37 (447117-447119) Score: 79.44
Seq: GGTCCGATAGCTCAGCTGGAtAGAGCATTCGCCTTCTAAGCGAACGGtCGAGGGTTCGAATCCCCCTCGGATCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>.>>>.......<<<.<<<<<<<<.
chr.trna35 (2360016-2359943) Length: 74 bp
Type: Asn Anticodon: GTT at 35-37 (2359982-2359980) Score: 74.24
Seq: TGCGGATTAGCTCAGTTGGTaGTAGCGCATGACTGTTAATCATGATGtCGTCAGTTCGAGTCTGACATCCGCAG
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna7 (28818-28891) Length: 74 bp
Type: Asn Anticodon: GTT at 35-37 (28852-28854) Score: 74.24
Seq: TGCGGATTAGCTCAGTTGGTaGTAGCGCATGACTGTTAATCATGATGtCGTCAGTTCGAGTCTGACATCCGCAG
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna17 (542618-542690) Length: 73 bp
Type: Asp Anticodon: GTC at 34-36 (542651-542653) Score: 72.62
Seq: GGTTCTGTAGTGTAGCGGTtATCACGTCGCCCTGTCACGGCGAAGAtCGCGGGTTCGATTCCCGTCAGAACCG
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna50 (1981046-1980974) Length: 73 bp
Type: Asp Anticodon: GTC at 34-36 (1981013-1981011) Score: 72.62
Seq: GGTTCTGTAGTGTAGCGGTtATCACGTCGCCCTGTCACGGCGAAGAtCGCGGGTTCGATTCCCGTCAGAACCG
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna11 (424317-424387) Length: 71 bp
Type: Cys Anticodon: GCA at 33-35 (424349-424351) Score: 60.16
Seq: GGCGGCGTAGTGAAGTGGTAACACATGGCTCTGCAAAAGCTTAAtCGTCGGTTCAAATCCGACCGTCGCCT
Str: >>>>>>>..>>>.........<<<..>>>>.......<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna41 (2340595-2340524) Length: 72 bp
Type: Gln Anticodon: TTG at 33-35 (2340563-2340561) Score: 64.56
Seq: TGGGGTATAGCCAAGCGGTAAGGCAAGGGACTTTGACTCCCTCATgCGTTGGTTCGAATCCAGCTACCCCAG
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna56 (1690779-1690708) Length: 72 bp
Type: Gln Anticodon: TTG at 33-35 (1690747-1690745) Score: 64.56
Seq: TGGGGTATAGCCAAGCGGTAAGGCAAGGGACTTTGACTCCCTCATgCGTTGGTTCGAATCCAGCTACCCCAG
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna1 (28196-28267) Length: 72 bp
Type: Glu Anticodon: TTC at 34-36 (28229-28231) Score: 64.66
Seq: GGTCCGTTGGTCAAGGGGTtAAGACACCGCCTTTTCACGGCGGTAACACGGGTTCGAATCCCGTACGGACTA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.
chr.trna34 (2360124-2360053) Length: 72 bp
Type: Glu Anticodon: TTC at 34-36 (2360091-2360089) Score: 64.66
Seq: GGTCCGTTGGTCAAGGGGTtAAGACACCGCCTTTTCACGGCGGTAACACGGGTTCGAATCCCGTACGGACTA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.
chr.trna21 (542981-543052) Length: 72 bp
Type: Gly Anticodon: GCC at 33-35 (543013-543015) Score: 72.25
Seq: GCGAACGTAGTTCAGGGGTAGAACACAACCTTGCCATGGTTGGGGtCGCGAGTTCGAATCTCGTCGTTCGCT
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna54 (1980683-1980612) Length: 72 bp
Type: Gly Anticodon: GCC at 33-35 (1980651-1980649) Score: 72.25
Seq: GCGAACGTAGTTCAGGGGTAGAACACAACCTTGCCATGGTTGGGGtCGCGAGTTCGAATCTCGTCGTTCGCT
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna27 (543531-543601) Length: 71 bp
Type: Gly Anticodon: TCC at 33-35 (543563-543565) Score: 66.56
Seq: GCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATCCGCT
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.
chr.trna5 (28535-28605) Length: 71 bp
Type: Gly Anticodon: TCC at 33-35 (28567-28569) Score: 66.56
Seq: GCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATCCGCT
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.
chr.trna40 (2340675-2340603) Length: 73 bp
Type: His Anticodon: GTG at 34-36 (2340642-2340640) Score: 66.52
Seq: GCGGATGTGGTGAAGTGGTtAACACACCGGCTTGTGGCGCCGGCACtCGCGAGTTCGATCCTCGTCATCCGCC
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna28 (543628-543701) Length: 74 bp
Type: Ile Anticodon: GAT at 35-37 (543662-543664) Score: 79.86
Seq: GGGAGTTTAGCTCAGTTGGTtAGAGCACTGTGTTGATAACGCAGGGGtCCCAGGTTCGAATCCTGGAATTCCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna6 (28620-28693) Length: 74 bp
Type: Ile Anticodon: GAT at 35-37 (28654-28656) Score: 79.86
Seq: GGGAGTTTAGCTCAGTTGGTtAGAGCACTGTGTTGATAACGCAGGGGtCCCAGGTTCGAATCCTGGAATTCCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna59 (256130-256042) Length: 89 bp
Type: Leu Anticodon: AAG at 35-37 (256096-256094) Score: 56.98
Seq: GCGGTGGTGGCGGAATTGGCaGACGCGCAGGATTAAGGATCCTGTCGGGAATTTTCTTGgTGCGGGTTCAAGTCCCGCCCACCGCACTA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>>>..<<<<<...>>>>>.......<<<<<<<<<<<<....
chr.trna62 (123448-123360) Length: 89 bp
Type: Leu Anticodon: AAG at 35-37 (123414-123412) Score: 56.98
Seq: GCGGTGGTGGCGGAATTGGCaGACGCGCAGGATTAAGGATCCTGTCGGGAATTTTCTTGgTGCGGGTTCAAGTCCCGCCCACCGCACTA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>>>..<<<<<...>>>>>.......<<<<<<<<<<<<....
chr.trna42 (2340511-2340428) Length: 84 bp
Type: Leu Anticodon: CAA at 35-37 (2340477-2340475) Score: 61.97
Seq: GCCGAAGTGGCGGAATAGGCaGACGCGCCAGACTCAAAATCTGGTTCCTTCACGGGAGTGCCGGTTCGACCCCGGCCTTCGGCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>....<<<<..>>>>>.......<<<<<<<<<<<<.
chr.trna43 (2299451-2299369) Length: 83 bp
Type: Leu Anticodon: CAG at 34-36 (2299418-2299416) Score: 62.88
Seq: GGGGAAGTGGTGGAATGGCaGACACGCATGCTTCAGGTGCATGTGCGAGAAATCGCGTGAGGGTTCAAATCCCTTCTTCCCCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>....<<<<..>>>>>.......<<<<<<<<<<<<.
chr.trna47 (2012621-2012538) Length: 84 bp
Type: Leu Anticodon: TAA at 35-37 (2012587-2012585) Score: 58.41
Seq: GCTCGAATGGCGGAATTGGCaGACGCTGCGGACTTAAAATCCGTTGGTTATTAAACCGTGAGGGTTCAAGTCCCTCTTTGAGCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>....<<<<..>>>>>.......<<<<<<<<<<<<.
chr.trna55 (1980576-1980491) Length: 86 bp
Type: Leu Anticodon: TAA at 35-37 (1980542-1980540) Score: 61.13
Seq: CCCGGGGTGGCGGAACTGGCaGACGCACAGGACTTAAAATCCTGCGAGGGGTAACCTTCGTACCGGTTCGAAACCGGTCCTCGGGA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>....<<<<<..>>>>>.......<<<<<<<<<<<<.
chr.trna19 (542789-542870) Length: 82 bp
Type: Leu Anticodon: TAG at 35-37 (542823-542825) Score: 66.93
Seq: GCGGATGTGGCGGAATTGGCaGACGCACTAGATTTAGGATCTAGCGCTTAACGGCGTGGGGGTTCAAGTCCCTTCATCCGCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>....<<<..>>>>>.......<<<<<<<<<<<<.
chr.trna52 (1980875-1980794) Length: 82 bp
Type: Leu Anticodon: TAG at 35-37 (1980841-1980839) Score: 66.93
Seq: GCGGATGTGGCGGAATTGGCaGACGCACTAGATTTAGGATCTAGCGCTTAACGGCGTGGGGGTTCAAGTCCCTTCATCCGCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>....<<<..>>>>>.......<<<<<<<<<<<<.
chr.trna8 (56361-56433) Length: 73 bp
Type: Lys Anticodon: CTT at 34-36 (56394-56396) Score: 80.33
Seq: GGCCCGGTAGCTCAGTTGGTAGAGCAGTAGACTCTTAATCTATGGGtCCAGGGTTCGAGCCCCTGCCGAGCCA
Str: >>>.>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<.<<<.
chr.trna18 (542708-542780) Length: 73 bp
Type: Lys Anticodon: TTT at 34-36 (542741-542743) Score: 83.14
Seq: GACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGtCGCTGGTTCGAGCCCAGCACGGGTCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna51 (1980956-1980884) Length: 73 bp
Type: Lys Anticodon: TTT at 34-36 (1980923-1980921) Score: 83.14
Seq: GACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGtCGCTGGTTCGAGCCCAGCACGGGTCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna31 (618494-618569) Length: 76 bp
Type: Lys Anticodon: TTT at 34-36 (618527-618529) Score: 83.76
Seq: GACTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAAAGGGtCGCTGGTTCGAGCCCAGCACGGGTCACTA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna14 (517530-517603) Length: 74 bp
Type: Met Anticodon: CAT at 35-37 (517564-517566) Score: 51.57
Seq: AGTTCTTTAGCTTAGTTGGTtAAAGTCCCCCGCTCATAACGGGGTAAgCGCTGGTTTGAGTCCAGCAAGAACCA
Str: .>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<..
chr.trna3 (28373-28446) Length: 74 bp
Type: Met Anticodon: CAT at 35-37 (28407-28409) Score: 74.76
Seq: CGCGGGATGGAGCAGCTaGGTAGCTCGTCGGGCTCATAACCCGAAGGtCATAGGTTCAAATCCTATTCCCGCAA
Str: .>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<..
chr.trna24 (543281-543354) Length: 74 bp
Type: Met Anticodon: CAT at 35-37 (543315-543317) Score: 75.67
Seq: GGCGGTGTAGCTCAGCTGGCtAGAGCGTTCGGTTCATACCCGAGAGGtCGGGGGTTCGATCCCCTTCGCCGCTA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna25 (543367-543440) Length: 74 bp
Type: Met Anticodon: CAT at 35-37 (543401-543403) Score: 86.03
Seq: GGATCTTTAGCTCAGTTGGTtAGAGCTATCGGCTCATAACCGATCGGtCGCTGGTTCGAATCCAGCAAGATCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna26 (543448-543520) Length: 73 bp
Type: Phe Anticodon: GAA at 34-36 (543481-543483) Score: 75.06
Seq: GGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGtCGGCGGTTCGATTCCGTCTCGCGCCA
Str: >>>.>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<.<<<.
chr.trna4 (28451-28523) Length: 73 bp
Type: Phe Anticodon: GAA at 34-36 (28484-28486) Score: 75.06
Seq: GGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGtCGGCGGTTCGATTCCGTCTCGCGCCA
Str: >>>.>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<.<<<.
chr.trna10 (283094-283167) Length: 74 bp
Type: Pro Anticodon: TGG at 35-37 (283128-283130) Score: 80.16
Seq: CGGGAAGTAGCTCAGCTtGGTAGAGTACTTGGTTTGGGACCAAGGTGtCGCAGGTTCGAATCCTGTCTTCCCGA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna23 (543170-543243) Length: 74 bp
Type: Pro Anticodon: TGG at 35-37 (543204-543206) Score: 80.16
Seq: CGGGAAGTAGCTCAGCTtGGTAGAGTACTTGGTTTGGGACCAAGGTGtCGCAGGTTCGAATCCTGTCTTCCCGA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna61 (126597-126511) Length: 87 bp
Type: Ser Anticodon: CGA at 33-35 (126565-126563) Score: 63.62
Seq: GGAGCCATGGCAGAGTGGTAATGCAGCGGACTCGAAATCCGTCGAACCGTGTAAaGCGGCGCAGGGGTTCAAATCCCCTTGACTCCT
Str: >>>>.>>..>>>.........<<<.>>>>>.......<<<<<....>>>>.....<<<<...>>>>>.......<<<<<<<.<<<<.
chr.trna29 (543744-543831) Length: 88 bp
Type: Ser Anticodon: GCT at 35-37 (543778-543780) Score: 58.10
Seq: GGGGGGTTACTCAAGAGGCtgAAGAGGACGGTTTGCTAAATCGTTAGGTCGGGAAACCGGCGCGAGGGTTCGAATCCCTTACCCCCCT
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<...>>>>>....<<<<<..>>>>>.......<<<<<<<<<<<<.
chr.trna58 (275599-275512) Length: 88 bp
Type: Ser Anticodon: GGA at 35-37 (275565-275563) Score: 52.85
Seq: GGAGAAGTGTCCGAGTGGCcgAAGGAGCACGCCTGGAAAGTGTGTATACGTCACAAGCGTATCGGGGGTTCGAATCCCCTCTTCTCCT
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>>.....<<<<<<.>>>>>.......<<<<<<<<<<<<.
chr.trna2 (28273-28362) Length: 90 bp
Type: Ser Anticodon: TGA at 37-39 (28309-28311) Score: 61.73
Seq: GGAGGATTACCCAAGTCcGGCtgAAGGGAACGGTCTTGAAAACCGTCAGGCGTGTAAAAGCGTGCGTGGGTTCGAATCCCACATCCTCCT
Str: >>>>>>>..>>>.............<<<.>>>>>.......<<<<<.>.>>.>....<.<<.<..>>>>>.......<<<<<<<<<<<<.
chr.trna57 (1412438-1412349) Length: 90 bp
Type: Ser Anticodon: TGA at 37-39 (1412402-1412400) Score: 62.33
Seq: GGAGGATTACCCAAGCCtGGCtgAAGGGAACGGTCTTGAAAACCGTCAGGCATGTAAAGGCGTGCGTGGGTTCGAATCCCACATCCTCCT
Str: >>>>>>>..>>>.............<<<.>>>>>.......<<<<<.>.>>.>....<.<<.<..>>>>>.......<<<<<<<<<<<<.
chr.trna60 (155312-155240) Length: 73 bp
Type: Thr Anticodon: CGT at 34-36 (155279-155277) Score: 78.25
Seq: GCCGAGTTAGCTCAGTCGGTAGAGCACTTCACTCGTAACGAAGGGGtCACAGGTTCGATTCCTGCACTCGGCA
Str: >>>>>>>..>>>>........<<<<.>>>>.........<<<<......>>>>.......<<<<.<<<<<<<.
chr.trna46 (2151502-2151430) Length: 73 bp
Type: Thr Anticodon: GGT at 34-36 (2151469-2151467) Score: 70.82
Seq: GCCGTTGTAGCTCAGTCGGTAGAGCAGCACCATGGTAAGGTGAAGGtCGACAGTTCGATTCTGTTCAATGGCA
Str: >>>>>>>..>>>>........<<<<..>>>>.......<<<<......>>>>>.......<<<<<<<<<<<<.
chr.trna20 (542883-542955) Length: 73 bp
Type: Thr Anticodon: TGT at 34-36 (542916-542918) Score: 83.91
Seq: GCCGACTTAGCTCAGTTGGTAGAGCATCTGATTTGTAATCAGAGGGtCGCGTGTTCGAATCATGTAGTCGGCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna53 (1980781-1980709) Length: 73 bp
Type: Thr Anticodon: TGT at 34-36 (1980748-1980746) Score: 83.91
Seq: GCCGACTTAGCTCAGTTGGTAGAGCATCTGATTTGTAATCAGAGGGtCGCGTGTTCGAATCATGTAGTCGGCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna39 (2340756-2340686) Length: 71 bp
Type: Trp Anticodon: CCA at 33-35 (2340724-2340722) Score: 47.03
Seq: ACGGGCATCGTATAAAGGTAGTACAAAGGTCTCCAAAACCTTTAGTGTGGGTTCAATTCCTGCTGCCCGTG
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.
chr.trna38 (2340843-2340763) Length: 81 bp
Type: Tyr Anticodon: GTA at 35-37 (2340809-2340807) Score: 65.00
Seq: GGAAGGGTAGCGAAGAGGCtaAACGCGGCGGACTGTAAATCCGCTCCTTCGGGTtCGGGGGTTCGAATCCCTCCCCTTCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>..<<<...>>>>>.......<<<<<<<<<<<<.
chr.trna13 (483875-483935) Length: 61 bp
Type: Undet Anticodon: ??? at 0-0 (0-0) Score: 30.70
Seq: GGTTCTTTAGCTCAGTTGGTAGCTAACCGTTCGGtCGCTGGTTCGAGTCCAGCAAGAACCA
Str: >>>>>>>..>>..........<<.>>>.<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna16 (542516-542588) Length: 73 bp
Type: Val Anticodon: TAC at 34-36 (542549-542551) Score: 84.84
Seq: GGGAGTTTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGtCAGCGGTTCGATCCCGTTAACTCCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna37 (2340951-2340879) Length: 73 bp
Type: Val Anticodon: TAC at 34-36 (2340918-2340916) Score: 84.84
Seq: GGGAGTTTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGtCAGCGGTTCGATCCCGTTAACTCCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna49 (1981148-1981076) Length: 73 bp
Type: Val Anticodon: TAC at 34-36 (1981115-1981113) Score: 84.84
Seq: GGGAGTTTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGtCAGCGGTTCGATCCCGTTAACTCCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
The Genomic tRNA Database is curated by Todd Lowe and Patricia Chan.
Please email lowe@soe.ucsc.edu
with any questions and comments. To submit corrections, please use our
Bug and Request Tracking System.