tRNAscan-SE Analysis of the Haemophilus influenzae Genome
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| Predicted tRNA Secondary Structures |
Click on "View tRNA" buttons to view 2-D tRNA structures
Cove-predicted tRNA secondary structures rendered by
NAVIEW (c) 1988 Robert E. Bruccoleri
chr.trna49 (307354-307279) Length: 76 bp
Type: Ala Anticodon: GGC at 34-36 (307321-307319) Score: 85.98
Seq: GGGGATATAGCTCAGTTGGGAGAGCGCTTGAATGGCATTCAAGAGGtCGTCGGTTCGATCCCGATTATCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna15 (625606-625681) Length: 76 bp
Type: Ala Anticodon: TGC at 34-36 (625639-625641) Score: 93.20
Seq: GGGGATATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGtCAGCGGTTCGATCCCGCTTATCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna26 (772991-773066) Length: 76 bp
Type: Ala Anticodon: TGC at 34-36 (773024-773026) Score: 93.20
Seq: GGGGATATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGtCAGCGGTTCGATCCCGCTTATCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna33 (1820218-1820143) Length: 76 bp
Type: Ala Anticodon: TGC at 34-36 (1820185-1820183) Score: 93.20
Seq: GGGGATATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGtCAGCGGTTCGATCCCGCTTATCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna45 (684935-684859) Length: 77 bp
Type: Arg Anticodon: ACG at 35-37 (684901-684899) Score: 85.94
Seq: GCACCCGTAGCTCAGCTGGAtAGAGTACTCGGCTACGAACCGAGCGGtCAAAGGTTCGAATCCTTTCGGGTGCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna44 (685069-684993) Length: 77 bp
Type: Arg Anticodon: ACG at 35-37 (685035-685033) Score: 86.34
Seq: GCACCCGTAGCTCAGCTGGAtAGAGTACTCGGCTACGAACCGAGCGGtCAGAGGTTCGAATCCTCTCGGGTGCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna55 (129168-129092) Length: 77 bp
Type: Arg Anticodon: CCG at 35-37 (129134-129132) Score: 85.75
Seq: GCGTTCGTAGCTCAGTTGGAtAGAGCGTTGGCCTCCGGAGCCAAAGGtCGCAAGTTCGAATCTTGTCGAGCGCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna19 (641229-641305) Length: 77 bp
Type: Arg Anticodon: TCT at 35-37 (641263-641265) Score: 91.33
Seq: GCGCCCTTAGCTCAGCTGGAtAGAGCAACGCCCTTCTAAGGCGTGGGtCAAAGGTTCGAATCCTTTAGGGCGTGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna28 (825391-825466) Length: 76 bp
Type: Asn Anticodon: GTT at 34-36 (825424-825426) Score: 82.59
Seq: TCCTCCTTAGTTCAGTCGGTAGAACGGTGGACTGTTAATCCATATGtCGCAGGTTCGAGTCCCGCAGGAGGAGCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>.>>.......<<.<<<<<<<<<....
chr.trna29 (1324965-1325040) Length: 76 bp
Type: Asn Anticodon: GTT at 34-36 (1324998-1325000) Score: 84.69
Seq: TCCTCCTTAGTTCAGTCGGTAGAACGGTGGACTGTTAATCCATATGtCGCTGGTTCAAGTCCAGCAGGAGGAGCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna16 (629523-629599) Length: 77 bp
Type: Asp Anticodon: GTC at 35-37 (629557-629559) Score: 89.09
Seq: GGAGTGGTAGTTCAGCTGGTtAGAATACCTGCCTGTCACGCAGGGGGtCGCGGGTTCGAGTCCCGTCCATTCCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna52 (152404-152328) Length: 77 bp
Type: Asp Anticodon: GTC at 35-37 (152370-152368) Score: 89.09
Seq: GGAGTGGTAGTTCAGCTGGTtAGAATACCTGCCTGTCACGCAGGGGGtCGCGGGTTCGAGTCCCGTCCATTCCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna53 (152304-152228) Length: 77 bp
Type: Asp Anticodon: GTC at 35-37 (152270-152268) Score: 89.09
Seq: GGAGTGGTAGTTCAGCTGGTtAGAATACCTGCCTGTCACGCAGGGGGtCGCGGGTTCGAGTCCCGTCCATTCCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna3 (91628-91701) Length: 74 bp
Type: Cys Anticodon: GCA at 33-35 (91660-91662) Score: 52.06
Seq: GGCGTGTTAGCAAAGCGGTTATGCACTGGATTGCAAATCCATGTAGCTCGGTTCGACTCCGGGACACGCCTCCA
Str: >>>>>>>..>>>.........<<<..>>>>.......<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna37 (1693946-1693872) Length: 75 bp
Type: Gln Anticodon: TTG at 33-35 (1693914-1693912) Score: 64.84
Seq: TGGGGTATCGCCAAGCGGTAAGGCCCTGGGTTTTGATCTCAGCATtCCTAGGTTCGAATCCTAGTACCCCAGCCA
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna36 (1694068-1693994) Length: 75 bp
Type: Gln Anticodon: TTG at 33-35 (1694036-1694034) Score: 68.96
Seq: TGGGGTATCGCCAAGCGGTAAGGCACTGGGTTTTGATCTCAGCATtCCTAGGTTCGAATCCTAGTACCCCAGCCA
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna20 (658778-658853) Length: 76 bp
Type: Glu Anticodon: TTC at 35-37 (658812-658814) Score: 56.27
Seq: GTCCCCATCGTCTAGAGGCctAGGACATCGCCCTTTCACGGCGGTAACCGGGGTTCGAATCCCCGTGGGGACGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
chr.trna51 (245881-245806) Length: 76 bp
Type: Glu Anticodon: TTC at 35-37 (245847-245845) Score: 56.27
Seq: GTCCCCATCGTCTAGAGGCctAGGACATCGCCCTTTCACGGCGGTAACCGGGGTTCGAATCCCCGTGGGGACGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
chr.trna58 (127044-126969) Length: 76 bp
Type: Glu Anticodon: TTC at 35-37 (127010-127008) Score: 56.27
Seq: GTCCCCATCGTCTAGAGGCctAGGACATCGCCCTTTCACGGCGGTAACCGGGGTTCGAATCCCCGTGGGGACGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
chr.trna2 (91546-91621) Length: 76 bp
Type: Gly Anticodon: GCC at 34-36 (91579-91581) Score: 91.37
Seq: GCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGtCGCGAGTTCGAGCCTCGTTTCCCGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna6 (139513-139588) Length: 76 bp
Type: Gly Anticodon: GCC at 34-36 (139546-139548) Score: 91.37
Seq: GCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGtCGCGAGTTCGAGCCTCGTTTCCCGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna31 (1787881-1787956) Length: 76 bp
Type: Gly Anticodon: GCC at 34-36 (1787914-1787916) Score: 93.74
Seq: GCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGtCGCGAGTTCGAGTCTCGTTTCCCGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna23 (671506-671580) Length: 75 bp
Type: Gly Anticodon: TCC at 34-36 (671539-671541) Score: 63.54
Seq: GCGGGCATCGTATAATGGCtATTACCTTAGCCTTCCAAGCTAATGATGCGGGTTCGATTCCCGCTGCCCGCTCCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
chr.trna56 (129065-128990) Length: 76 bp
Type: His Anticodon: GTG at 34-36 (129032-129030) Score: 84.86
Seq: GTGGCTATAGCTCAGTTGGTAGAGCCCTGGATTGTGATTCCAGTTGtCGTGGGTTCGAATCCCATTAGCCACCCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna14 (625444-625520) Length: 77 bp
Type: Ile Anticodon: GAT at 35-37 (625478-625480) Score: 94.77
Seq: GGGTCTGTAGCTCAGGTGGTtAGAGCGCACCCCTGATAAGGGTGAGGtCGGTGGTTCAAGTCCACTCAGACCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna25 (772829-772905) Length: 77 bp
Type: Ile Anticodon: GAT at 35-37 (772863-772865) Score: 94.77
Seq: GGGTCTGTAGCTCAGGTGGTtAGAGCGCACCCCTGATAAGGGTGAGGtCGGTGGTTCAAGTCCACTCAGACCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna32 (1820380-1820304) Length: 77 bp
Type: Ile Anticodon: GAT at 35-37 (1820346-1820344) Score: 94.77
Seq: GGGTCTGTAGCTCAGGTGGTtAGAGCGCACCCCTGATAAGGGTGAGGtCGGTGGTTCAAGTCCACTCAGACCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna40 (1513296-1513211) Length: 86 bp
Type: Leu Anticodon: CAA at 35-37 (1513262-1513260) Score: 72.60
Seq: GCCTGGGTGGCGAAATTGGTaGACGCAGCGGATTCAAAATCCGCCGTTGAATaAACGTGTCGGTTCGAGTCCGACCCTAGGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>.....<<<..>>>>>.......<<<<<<<<<<<<....
chr.trna13 (467760-467845) Length: 86 bp
Type: Leu Anticodon: GAG at 35-37 (467794-467796) Score: 54.25
Seq: GCTCTGGTGGTGGAATTGGTaGACACGCTATCTTGAGGGGGTAGTGACCACAGGTCGTGCGAGTTCAAGTCTCGCCCAGAGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<....
chr.trna4 (91729-91815) Length: 87 bp
Type: Leu Anticodon: TAA at 35-37 (91763-91765) Score: 69.53
Seq: GCCCGAGTGGTGGAATCGGTaGACACAAGGGATTTAAAATCCCTCGCCTTTCGAGGCGTGCCAGTTCAAGTCTGGCTTCGGGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>....<<<<..>>>>>.......<<<<<<<<<<<<....
chr.trna7 (139593-139679) Length: 87 bp
Type: Leu Anticodon: TAA at 35-37 (139627-139629) Score: 69.53
Seq: GCCCGAGTGGTGGAATCGGTaGACACAAGGGATTTAAAATCCCTCGCCTTTCGAGGCGTGCCAGTTCAAGTCTGGCTTCGGGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>....<<<<..>>>>>.......<<<<<<<<<<<<....
chr.trna35 (1694181-1694097) Length: 85 bp
Type: Leu Anticodon: TAG at 35-37 (1694147-1694145) Score: 68.23
Seq: GCGGGACTGGCGAAATTGGTaGACGCACCAGATTTAGGTTCTGGCGCCGAGAGGTGTGTGGGTTCAAGTCCCTCGTCCCGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>....<<<..>.>>>.......<<<.<<<<<<<<....
chr.trna47 (401871-401796) Length: 76 bp
Type: Lys Anticodon: CTT at 34-36 (401838-401836) Score: 79.91
Seq: GGGTTGTTAGCTCAGTTGGTAGAGTAGCGGACTCTTAATCCGTCAGtCGAGAGTTCTAGTCTCTCACAACCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna46 (401970-401895) Length: 76 bp
Type: Lys Anticodon: TTT at 34-36 (401937-401935) Score: 97.43
Seq: GGGTCGTTAGCTCAGTCGGTAGAGCAGCGGACTTTTAATCCGTTGGtCGAAGGTTCGAATCCTTCACGACCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna5 (91866-91941) Length: 76 bp
Type: Lys Anticodon: TTT at 34-36 (91899-91901) Score: 97.43
Seq: GGGTCGTTAGCTCAGTCGGTAGAGCAGCGGACTTTTAATCCGTTGGtCGAAGGTTCGAATCCTTCACGACCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna8 (139730-139805) Length: 76 bp
Type: Lys Anticodon: TTT at 34-36 (139763-139765) Score: 97.43
Seq: GGGTCGTTAGCTCAGTCGGTAGAGCAGCGGACTTTTAATCCGTTGGtCGAAGGTTCGAATCCTTCACGACCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna54 (131660-131584) Length: 77 bp
Type: Met Anticodon: CAT at 35-37 (131626-131624) Score: 83.58
Seq: CGCGGGGTGGAGCAGCTtGGTAGCTCGTCGGGCTCATAACCCGAAGGcCGTCGGTTCAAATCCGGCCCCCGCAACCA
Str: .>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.....
chr.trna41 (981511-981435) Length: 77 bp
Type: Met Anticodon: CAT at 35-37 (981477-981475) Score: 86.41
Seq: CCCCCCTTAGCTCAGTCGGTtAGAGCAGGCGACTCATAATCGCTTGGtCACTGGTTCAAGTCCGGTAGGGGGGACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna30 (1358358-1358434) Length: 77 bp
Type: Met Anticodon: CAT at 35-37 (1358392-1358394) Score: 87.09
Seq: CGCGGGGTGGAGCAGCTtGGTAGCTCGTCGGGCTCATAACCCGAAGGtCGTTGGTTCAAATCCAGCCCCCGCAACCA
Str: .>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.....
chr.trna34 (1694263-1694187) Length: 77 bp
Type: Met Anticodon: CAT at 35-37 (1694229-1694227) Score: 92.50
Seq: GGCTACATAGCTCAGTTGGTtAGAGCACAACACTCATAATGTTGGGGtCGCAAGTTCGAATCTCGCTGTAGCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>.>>.......<<.<<<<<<<<<....
chr.trna27 (825313-825388) Length: 76 bp
Type: Phe Anticodon: GAA at 34-36 (825346-825348) Score: 85.75
Seq: GCCTCGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGtCGGTGGTTCGATTCCGCCTCGAGGCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna18 (641105-641181) Length: 77 bp
Type: Pro Anticodon: TGG at 35-37 (641139-641141) Score: 90.87
Seq: CGGCGAGTAGCGCAGCTtGGTAGCGCAACTGGTTTGGGACCAGTGGGtCGTAGGTTCAAATCCTATCTCGCCGACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna57 (128968-128892) Length: 77 bp
Type: Pro Anticodon: TGG at 35-37 (128934-128932) Score: 90.87
Seq: CGGCGAGTAGCGCAGCTtGGTAGCGCAACTGGTTTGGGACCAGTGGGtCGTAGGTTCAAATCCTATCTCGCCGACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna39 (1577041-1576960) Length: 82 bp
Type: Undet Anticodon: ??? at 0-0 (0-0) Score: 27.81
Seq: TGTTATGTGGCGAAATGGTAACGCGgcatTCCCATTcTTTAATGGCATATGTATAtCGTGGGTTCAACCCCCACCATAACAC
Str: >>>>>>>..>>>.........<<<.....>.>>>........<<<.<.>>><<<...>>>>>.......<<<<<<<<<<<<.
chr.trna42 (753881-753791) Length: 91 bp
Type: SeC(p) Anticodon: TCA at 35-37 (753847-753845) Score: 66.88
Seq: GGAGGGGCGTCATCTCCGGTGAGGTGGCAGGATTTCAAATCCTGTTGAGGACGCCAGCGTTCTTGGGTGGGTTCAACTCCCATTCCCCTCC
Str: >>>>>>>...>>>>>>....<<<<<<>>>>>>.......<<<<<<>>>>>>>>....<<<<<<<<.>>>>>.......<<<<<.<<<<<<<
chr.trna43 (685184-685090) Length: 95 bp
Type: Ser Anticodon: GCT at 36-38 (685149-685147) Score: 74.67
Seq: GGTGAGATGGCCGAGCAGGCtgAAGGCGCTCCCCTGCTAAGGGAGTATGGGGTTAAAaaGCTCCATCGAGGGTTCGAATCCCTCTCTCACCGCCA
Str: >>>>>>>..>>>............<<<.>>>>>.......<<<<<.>>>>>>>......<<<<<<<.>>>>>.......<<<<<<<<<<<<....
chr.trna50 (288242-288153) Length: 90 bp
Type: Ser Anticodon: GGA at 35-37 (288208-288206) Score: 69.60
Seq: GGTGAGATGTCCGAGTGGTtgAAGGAGCACGCCTGGAAAGCGTGTATGTGGGAAACTGCATCAAGGGTTCAAATCCCTTTCTCACCGCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>>....<<<<<<.>>>>>.......<<<<<<<<<<<<....
chr.trna1 (47152-47241) Length: 90 bp
Type: Ser Anticodon: TGA at 35-37 (47186-47188) Score: 69.75
Seq: GGAGGAATGGTCGAGTGGTtgAAGGCACCGGTCTTGAAAACCGGCGAGGGTTTACGCCCTCCTAGGGTTCGAATCCCTATTCCTCCGCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>>....<<<<<<.>>>>>.......<<<<<<<<<<<<....
chr.trna48 (355437-355348) Length: 90 bp
Type: Ser Anticodon: TGA at 35-37 (355403-355401) Score: 69.75
Seq: GGAGGAATGGTCGAGTGGTtgAAGGCACCGGTCTTGAAAACCGGCGAGGGTTTACGCCCTCCTAGGGTTCGAATCCCTATTCCTCCGCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>>....<<<<<<.>>>>>.......<<<<<<<<<<<<....
chr.trna24 (671584-671659) Length: 76 bp
Type: Thr Anticodon: GGT at 34-36 (671617-671619) Score: 96.44
Seq: GCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGAGGtCGGCGGTTCAAATCCGCCTATCAGCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna21 (671274-671349) Length: 76 bp
Type: Thr Anticodon: TGT at 34-36 (671307-671309) Score: 90.20
Seq: GCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGtCATCAGTTCGATTCCGATAGTCGGCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>.>.......<.<<<<<<<<<<....
chr.trna17 (629628-629703) Length: 76 bp
Type: Trp Anticodon: CCA at 34-36 (629661-629663) Score: 79.69
Seq: AGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGtTGGGAGTTCGAGCCTCTCCGCCCCTGCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna22 (671379-671463) Length: 85 bp
Type: Tyr Anticodon: GTA at 35-37 (671413-671415) Score: 65.61
Seq: GGAGGGGTTCCCGAGCGGCcaAAGGGGGCAGACTGTAAATCTGTTGGCTCAGCCTtCGAAGGTTCGAATCCTTCTCCCTCCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>...<<<...>>>>>.......<<<<<<<<<<<<....
chr.trna38 (1640003-1639927) Length: 77 bp
Type: Val Anticodon: GAC at 35-37 (1639969-1639967) Score: 90.13
Seq: GCGACTATAGCTCAGTTGGTtAGAGCACCACCTTGACATGGTGGGGGtCACTGGTTCGAGTCCAGCTAGTCGCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<......>>>>.......<<<<.<<<<<<<....
chr.trna10 (309167-309242) Length: 76 bp
Type: Val Anticodon: TAC at 34-36 (309200-309202) Score: 90.00
Seq: GGGCGATTAGCTCAGTTGGGAGAGCACCTCCCTTACAAGGAGGGGGtCACTGGTTCGAGACCGGTATCGCCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna11 (309301-309376) Length: 76 bp
Type: Val Anticodon: TAC at 34-36 (309334-309336) Score: 90.00
Seq: GGGCGATTAGCTCAGTTGGGAGAGCACCTCCCTTACAAGGAGGGGGtCACTGGTTCGAGACCGGTATCGCCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna12 (309429-309504) Length: 76 bp
Type: Val Anticodon: TAC at 34-36 (309462-309464) Score: 90.00
Seq: GGGCGATTAGCTCAGTTGGGAGAGCACCTCCCTTACAAGGAGGGGGtCACTGGTTCGAGACCGGTATCGCCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna9 (309048-309123) Length: 76 bp
Type: Val Anticodon: TAC at 34-36 (309081-309083) Score: 90.00
Seq: GGGCGATTAGCTCAGTTGGGAGAGCACCTCCCTTACAAGGAGGGGGtCACTGGTTCGAGACCGGTATCGCCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
The Genomic tRNA Database is curated by Todd Lowe and Patricia Chan.
Please email lowe@soe.ucsc.edu
with any questions and comments. To submit corrections, please use our
Bug and Request Tracking System.