Genomic tRNA Database: Glycine max (soybean) (Glyma0 preliminary release)

tRNAscan-SE Analysis of Glycine max (soybean) (Glyma0 preliminary release)
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Structurally Aligned tRNAs (by Isotype & Anticodon)
Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

[Ala] [Arg] [Asn] [Asp] [Cys] [Gln] [Glu] [Gly] [His] [Ile] [Leu] [Lys] [Met] [Phe] [Pro] [Ser] [Thr] [Trp] [Tyr] [Val]
[Suppressor] [Selenocysteine]


Ala tRNAs


>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA scaffold_93.trna7-AlaAGC Sc: 68.12  
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA scaffold_83.trna4-AlaAGC Sc: 68.12  
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA scaffold_82.trna7-AlaAGC Sc: 68.12  
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA scaffold_82.trna16-AlaAGC Sc: 68.12  
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA scaffold_76.trna7-AlaAGC Sc: 68.12  
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA scaffold_63.trna14-AlaAGC Sc: 68.12  
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA scaffold_6.trna1-AlaAGC Sc: 68.12  
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA scaffold_47.trna5-AlaAGC Sc: 68.12  
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA scaffold_41.trna5-AlaAGC Sc: 68.12  
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA scaffold_35.trna8-AlaAGC Sc: 68.12  
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA scaffold_34.trna6-AlaAGC Sc: 68.12  
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA scaffold_28.trna4-AlaAGC Sc: 68.12  
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA scaffold_26.trna22-AlaAGC Sc: 68.12  
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA scaffold_228.trna3-AlaAGC Sc: 68.12  
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA scaffold_22.trna28-AlaAGC Sc: 68.12  
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA scaffold_21.trna9-AlaAGC Sc: 68.12  
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA scaffold_21.trna8-AlaAGC Sc: 68.12  
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA scaffold_21.trna1-AlaAGC Sc: 68.12  
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA scaffold_13.trna9-AlaAGC Sc: 68.12  
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA scaffold_129.trna1-AlaAGC Sc: 68.12  
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA scaffold_10.trna10-AlaAGC Sc: 68.12  
GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA scaffold_32.trna9-AlaAGC Sc: 67.37  
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCATAGCATGCGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA scaffold_60.trna5-AlaAGC Sc: 62.37  
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAG...........GcACGGGGATCGATGCCCCGCATCTCCA scaffold_152.trna6-AlaAGC Sc: 60.32  


>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GGGGACGTAGCTCATATGGTAGAGCGCTCGCTTCGCATGCGAGAG...........GcACGGGGTTCGATTCCCCGCGTCTCCA scaffold_76.trna4-AlaCGC Sc: 65.78  
GGGGGTGTAGCTCATATGGTAGAGCGCTCGCTTCGCATGCGAGAG...........GcACGGGGTTCGATTCCCCGCACCTCCA scaffold_92.trna10-AlaCGC Sc: 65.14  
GGGGGTGTAGCTCATATGGTAGAGCGCTCGCTTCGCATGCGAGAG...........GcACGGGGTTCGATTCCCCGCACCTCCA scaffold_78.trna5-AlaCGC Sc: 65.14  
GGGGGTGTAGCTCATATGGTAGAGCGCTCGCTTCGCATGCGAGAG...........GcACGGGGTTCGATTCCCCGCACCTCCA scaffold_161.trna1-AlaCGC Sc: 65.14  
GGGGGTGTAGCTCATATGGTAGAGCGCTCGCTTCGCATGCGAGAG...........GcACGGGGTTCGATTCCCCGCACCTCCA scaffold_149.trna1-AlaCGC Sc: 65.14  
GGGGGTGTAGCTCATATGGTAGAGCGCTCGCTTCGCATGCGAGAG...........GcACGGGGTTCGATTCCCCGCACCTCCA scaffold_13.trna10-AlaCGC Sc: 65.14  
GGGGGTGTAGCTCATATGGTAGAGCGCTCGCTTCGCATGCGAGAG...........GcACGGGGTTCGATTCCCCGCACCTCCA scaffold_10.trna11-AlaCGC Sc: 65.14  
GGGGTTGTAGCTCATATGGTAGAGCGCTCGCTTCGCATGCGAGAG...........GcACGGGGTTCGATTCCCCGCAACTCCA scaffold_214.trna3-AlaCGC Sc: 64.61  

>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAG...........GtACGGGGTTCGATCCCCCGCATCTCCA scaffold_6.trna4-AlaTGC Sc: 70.41  
GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAG...........GtACGGGGTTCGATCCCCCGCATCTCCA scaffold_59.trna3-AlaTGC Sc: 70.41  
GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAG...........GtACGGGGTTCGATCCCCCGCATCTCCA scaffold_2.trna4-AlaTGC Sc: 70.41  
GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAG...........GtACAGGGTTCGATCCCCTGCATCTCCA scaffold_70.trna5-AlaTGC Sc: 69.90  
GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAG...........GtACAGGGTTCGATCCCCTGCATCTCCA scaffold_43.trna10-AlaTGC Sc: 69.90  
GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAG...........GtACAGGGTTCGATCCCCTGCATCTCCA scaffold_30.trna5-AlaTGC Sc: 69.90  
GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAG...........GtACAGGGTTCGATCCCCTGCATCTCCA scaffold_25.trna6-AlaTGC Sc: 69.90  
GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAG...........GtACAGGGTTCGATCCCCTGCATCTCCA scaffold_222.trna2-AlaTGC Sc: 69.90  
GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAG...........GtACAGGGTTCGATCCCCTGCATCTCCA scaffold_152.trna3-AlaTGC Sc: 69.90  
GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAG...........GtACAGGGTTCGATCCCCTGCATCTCCA scaffold_102.trna2-AlaTGC Sc: 69.90  
GGGGATGTAGCTCAAATGGTAGAGCGCCCGCTTTGCATGCGGGAG...........GtACAGGGTTCGATCCCCTGCATCTCCA scaffold_158.trna1-AlaTGC Sc: 69.65  
GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAG...........GcACGGGGTTCGATCCCCCGCATCTCCA scaffold_77.trna3-AlaTGC Sc: 66.31  
GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAG...........GcACGGGGTTCGATCCCCCGCATCTCCA scaffold_7.trna12-AlaTGC Sc: 66.31  
GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAG...........GcACGGGGTTCGATCCCCCGCATCTCCA scaffold_68.trna4-AlaTGC Sc: 66.31  
GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAG...........GcACGGGGTTCGATCCCCCGCATCTCCA scaffold_25.trna18-AlaTGC Sc: 66.31  
GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAG...........GcACGGGGTTCGATCCCCCGCATCTCCA scaffold_128.trna3-AlaTGC Sc: 66.31  
GGGGATGTAGCTCATATGGTAGAGCGCTCGCTTTGCATGCGAGAG...........GcACGGGGTTCGATTCCCCGCATCTCCA scaffold_76.trna12-AlaTGC Sc: 64.16  



Arg tRNAs


>>>>>>>..>>>.............<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<.
GACTCCGTGGCCCAAT.GGAt.A.AGGCGCTGGTCTACGGAACCAGAG...........AtTCTGGGTTCGATCCCCAG.CGGAGTCG scaffold_3.trna16-ArgACG Sc: 74.06  
GACTCCATGGCCCAAT.GGAt.A.AGGCGCTGGTCTACGGAACCAGAG...........AtTCTGGGTTCGATCCCCAG.TGGAGTCG scaffold_55.trna1-ArgACG Sc: 73.66  
GACTCCATGGCCCAAT.GGAt.A.AGGCGCTGGTCTACGGAACCAGAG...........AtTCTGGGTTCGATCCCCAG.TGGAGTCG scaffold_5.trna8-ArgACG Sc: 73.66  
GACTCCATGGCCCAAT.GGAt.A.AGGCGCTGGTCTACGGAACCAGAG...........AtTCTGGGTTCGATCCCCAG.TGGAGTCG scaffold_43.trna6-ArgACG Sc: 73.66  
GACTCCATGGCCCAAT.GGAt.A.AGGCGCTGGTCTACGGAACCAGAG...........AtTCTGGGTTCGATCCCCAG.TGGAGTCG scaffold_43.trna3-ArgACG Sc: 73.66  
GACTCCATGGCCCAAT.GGAt.A.AGGCGCTGGTCTACGGAACCAGAG...........AtTCTGGGTTCGATCCCCAG.TGGAGTCG scaffold_4.trna5-ArgACG Sc: 73.66  
GACTCCATGGCCCAAT.GGAt.A.AGGCGCTGGTCTACGGAACCAGAG...........AtTCTGGGTTCGATCCCCAG.TGGAGTCG scaffold_32.trna2-ArgACG Sc: 73.66  
GACTCCATGGCCCAAT.GGAt.A.AGGCGCTGGTCTACGGAACCAGAG...........AtTCTGGGTTCGATCCCCAG.TGGAGTCG scaffold_30.trna21-ArgACG Sc: 73.66  
GACTCCATGGCCCAAT.GGAt.A.AGGCGCTGGTCTACGGAACCAGAG...........AtTCTGGGTTCGATCCCCAG.TGGAGTCG scaffold_139.trna2-ArgACG Sc: 73.66  
GACTCCATGGCCCAAT.GGAt.A.AGGCGCTGGTCTACGGAACCAGAG...........AtTCTGGGTTCGATCCCCAG.TGGAGTCG scaffold_135.trna1-ArgACG Sc: 73.66  
GACTCCATGGCCCAAT.GGAt.A.AGGCGCTGGTCTACGGAACCAGAG...........AtTCTGGGTTCGATCCCCAG.TGGAGTCG scaffold_124.trna2-ArgACG Sc: 73.66  
GACTCCATGGCCCAAT.GGAt.A.AGGCGCTGGTCTACGGAACCAGAG...........AtTCTGGGTTCGATCCCCAG.TGGAGTCG scaffold_121.trna7-ArgACG Sc: 73.66  
GACTCCATGGCCCAAT.GGAt.A.AGGCGCTGGTCTACGGAACCAGAG...........AtTCTGGGTTCGATCCCCAG.TGGAGTCG scaffold_121.trna4-ArgACG Sc: 73.66  
>>>>..>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<..<<<<.
GGGCCTGTAGCTCAGA.GGAttA.GAGCACGTGGCTACGAACCACGGT...........GtCGGGGGTTCGAATCCCTC.CTCGCCCA scaffold_262.trna54-ArgACG Sc: 61.16  
GGGCCTGTAGCTCAGA.GGAttA.GAGCACGTGGCTACGAACCACGGT...........GtCGGGGGTTCGAATCCCTC.CTCGCCCA scaffold_262.trna40-ArgACG Sc: 61.16  
GGGCCTGTAGCTCAGA.GGAttA.GAGCACGTGGCTACGAACCACGGT...........GtCGGGGGTTCGAATCCCTC.CTCGCCCA scaffold_262.trna32-ArgACG Sc: 61.16  
GGGCCTGTAGCTCAGA.GGAttA.GAGCACGTGGCTACGAACCACGGT...........GtCGGGGGTTCGAATCCCTC.CTCGCCCA scaffold_262.trna27-ArgACG Sc: 61.16  
GGGCCTGTAGCTCAGA.GGAttA.GAGCACGTGGCTACGAACCACGGT...........GtCGGGGGTTCGAATCCCTC.CTCGCCCA scaffold_262.trna2-ArgACG Sc: 61.16  
GGGCCTGTAGCTCAGA.GGAttA.GAGCACGTGGCTACGAACCACGGT...........GtCGGGGGTTCGAATCCCTC.CTCGCCCA scaffold_262.trna15-ArgACG Sc: 61.16  
GGGCCTGTAGCTCAGA.GGAttA.GAGCACGTGGCTACGAACCACGGT...........GtCGGGGGTTCGAATCCCTC.CTCGCCCA scaffold_2081.trna1-ArgACG Sc: 61.16  


>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<.
GATCGCATAGCGGAGT.GGAt.A.TCGCGTTAGACTCCGGATCTAAAG...........GtCGTGGGTTCGAATCCCAC.TGCGATCG scaffold_52.trna2-ArgCCG Sc: 82.46  
GGTCGCGTGGCCTAAT.GGAt.A.AGGCGCTCGCCTCCGGAGCGGGAG...........AtTGTGGGTTCGAGTCCCAC.CGTGATCG scaffold_26.trna12-ArgCCG Sc: 71.41  
GGTCGCGTGGCCTAAT.GGAt.A.AGGCGCTCGCCTCCGGAGCGGGAG...........AtTGTGGGTTCGAGTCCCAC.CGTGATCG scaffold_195.trna1-ArgCCG Sc: 71.41  
GTTCGCGTGGCCTAAT.GGAt.A.AGGCGCTCGCCTCCGGAGCGGGAG...........AtTGTGGGTTCGAGTCCCAC.CGTGGACG scaffold_41.trna14-ArgCCG Sc: 69.37  
GATCGCGTGGCCTAAT.GGAt.A.AGGCGCTCGCCTCCGGAGCGGGAG...........AtTGTGGGTTCGAGTCCCAT.CGCGATCG scaffold_18.trna1-ArgCCG Sc: 69.19  

>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<.
GACCGCATGGCGCAGT.GGAttA.GCGCGTTTGACTTCGGATCAAAAG...........GtCGTGGGTTCGACTCCCAC.TGTGGTCG scaffold_87.trna2-ArgTCG Sc: 82.52  
GACCGCATAGCGCAGT.GGAttA.GCGCGTTTGACTTCGGATCAAAAG...........GtCGTGGGTTCGACTCCCAC.TGTGGTCG scaffold_280.trna1-ArgTCG Sc: 82.11  
GACCGCATAGCGCAGT.GGAttA.GCGCGTTTGACTTCGGATCAAAAG...........GtCGTGGGTTCGACTCCCAC.TGTGGTCG scaffold_215.trna1-ArgTCG Sc: 82.11  
GACCGCATAGCGCAGT.GGAttA.GCGCGTTTGACTTCGGATCAAAAG...........GtCGTGGGTTCGACTCCCAC.TGTGGTCG scaffold_113.trna2-ArgTCG Sc: 82.11  
GACCGCATAGCGCAGT.GGAttA.GCGCGTCTGACTTCGGATCAGAAG...........GtCGTGGGTTCGACTCCCAC.TGTGGTCG scaffold_9.trna4-ArgTCG Sc: 81.86  
GACCGCATAGCGCAGT.GGAttA.GCGCGTCTGACTTCGGATCAGAAG...........GtCGTGGGTTCGACTCCCAC.TGTGGTCG scaffold_65.trna2-ArgTCG Sc: 81.86  
GACCGCATAGCGCAGT.GGAttA.GCGCGTCTGACTTCGGATCAGAAG...........GtCGTGGGTTCGACTCCCAC.TGTGGTCG scaffold_257.trna2-ArgTCG Sc: 81.86  
GACCGCATAGCGCAGT.GGAttA.GCGCGTCTGACTTCGGATCAGAAG...........GtCGTGGGTTCGACTCCCAC.TGTGGTCG scaffold_22.trna6-ArgTCG Sc: 81.86  
GACCGCATAGCGCAGT.GGAttA.GCGCGTCTGACTTCGGATCAGAAG...........GtCGTGGGTTCGACTCCCAC.TGTGGTCG scaffold_146.trna2-ArgTCG Sc: 81.86  

>>>>>.>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<.<<<<<.
GCGCCTGTAGCTCAGT.GGAt.A.GAGCGTCTGTTTCCTAAGCAGAAG...........GtCGTAGGTTCGACCCCTAC.CTGGCGCG scaffold_15.trna16-ArgCCT Sc: 76.26  
GCGCTTGTAGCTCAGT.GGAt.A.GAGCGTCTGTTTCCTAAGCAGAAG...........GtCGTAGGTTCGACCCCTAC.CTGGCGCG scaffold_63.trna1-ArgCCT Sc: 73.62  
GCGCTTGTAGCTCAGT.GGAt.A.GAGCGTCTGTTTCCTAAGCAGAAG...........GtCGTAGGTTCGACCCCTAC.CTGGCGCG scaffold_60.trna2-ArgCCT Sc: 73.62  
GCGCTTGTAGCTCAGT.GGAt.A.GAGCGTCTGTTTCCTAAGCAGAAG...........GtCGTAGGTTCGACCCCTAC.CTGGCGCG scaffold_41.trna19-ArgCCT Sc: 73.62  
GCGCTTGTAGCTCAGT.GGAt.A.GAGCGTCTGTTTCCTAAGCAGAAG...........GtCGTAGGTTCGACCCCTAC.CTGGCGCG scaffold_297.trna1-ArgCCT Sc: 73.62  
GCGCTTGTAGCTCAGT.GGAt.A.GAGCGTCTGTTTCCTAAGCAGAAG...........GtCGTAGGTTCGACCCCTAC.CTGGCGCG scaffold_28.trna6-ArgCCT Sc: 73.62  
GCGCTTGTAGCTCAGT.GGAt.A.GAGCGTCTGTTTCCTAAGCAGAAG...........GtCGTAGGTTCGACCCCTAC.CTGGCGCG scaffold_188.trna5-ArgCCT Sc: 73.62  
GCGCTTGTAGCTCAGT.GGAt.A.GAGCGTCTGTTTCCTAAGCAGAAG...........GtCGTAGGTTCGACCCCTAC.CTGGCGCG scaffold_106.trna1-ArgCCT Sc: 73.62  
GCGCCTGTAGCTCAGT.GGAt.A.GAGCGTCTGTTTCCTAAGCAGAAA...........GtCGTAGGTTCGACCCCTAC.CTGGCGCG scaffold_82.trna4-ArgCCT Sc: 72.63  
GCGCCTGTAGCTCAGT.GGAt.A.GAGCGTCTGTTTCCTAAGCAGAAA...........GtCGTAGGTTCGACCCCTAC.CTGGCGCG scaffold_187.trna2-ArgCCT Sc: 72.63  
GCGCCTGTAGCTCAGT.GGAt.A.GAGCGTCTGTTTCCTAAGCAGAAA...........GtCGTAGGTTCGACCCCTAC.CTGGCGCG scaffold_179.trna1-ArgCCT Sc: 72.63  
GCGCCTGTAGCTCAGT.GGAt.A.GAGCGTCTGTTTCCTAAGCAGAAA...........GtCGTAGGTTCGACCCCTAC.CTGGCGCG scaffold_152.trna4-ArgCCT Sc: 72.63  
GCGCCTGTAGCTCAGT.GGAt.A.GAGCGTCTGTTTCCTAAGCAGAAA...........GtCGTAGGTTCGACCCCTAC.CTGGCGCG scaffold_152.trna2-ArgCCT Sc: 72.63  
>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<.
GTCTCCTTAGTTAAAT.GGAt.A.TAACGAGCCCCTCCTAAGGGCTA............GtTGCAGGTTCGATTCCTGC.AGGGGACA scaffold_1031.trna1-ArgCCT Sc: 69.02  

>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<.
GCGCCCATGGCCTAAT.GGAt.A.AGGCGCTTGACTTCTAATCAAGCG...........AtTGTGGGTTCGAGTCCCAC.TGGGCGTG scaffold_88.trna4-ArgTCT Sc: 73.60  
GCGCCCATGGCCTAAT.GGAt.A.AGGCGCTTGACTTCTAATCAAGCG...........AtTGTGGGTTCGAGTCCCAC.TGGGCGTG scaffold_307.trna1-ArgTCT Sc: 73.60  
GCGCCCATGGCCTAAT.GGAt.A.AGGCGCTTGACTTCTAATCAAGCG...........AtTGTGGGTTCGAGTCCCAC.TGGGCGTG scaffold_222.trna1-ArgTCT Sc: 73.60  
GCGCCCATGGCCTAAT.GGAt.A.AGGCGCTTGACTTCTAATCAAGCG...........AtTGTGGGTTCGAGTCCCAC.TGGGCGTG scaffold_190.trna2-ArgTCT Sc: 73.60  
GCGCCCATGGCCTAAT.GGAt.A.AGGCGCTTGACTTCTAATCAAGCG...........AtTGTGGGTTCGAGTCCCAC.TGGGCGTG scaffold_111.trna6-ArgTCT Sc: 73.60  
GCGCCCATGGCCTAAT.GGAt.A.AGGCGCTTGACTTCTAATCAAGCG...........AtTGTGGGTTCGAGTCCCAC.TGGGCGTG scaffold_111.trna5-ArgTCT Sc: 73.60  
GCGCCCATGGCCTAAT.GGAt.A.AGGCGCTTGACTTCTAATCAAGCG...........AtTGTGGGTTCGAGTCCCAC.TGGGCGTG scaffold_111.trna4-ArgTCT Sc: 73.60  
GCGCCTGTGGCCTAAT.GGAt.A.AGGCGCTTGACTTCTAATCAAGCG...........AtTGTGGGTTCGAGTCCCAC.CGGGCGTG scaffold_102.trna3-ArgTCT Sc: 72.12  
GCGCCTGTGGCCTAAT.GGAt.A.AGGCGCCTGACTTCTAATCAGGCG...........AtTGTGGGTTCGAGTCCCAC.CGGGCGTG scaffold_63.trna4-ArgTCT Sc: 71.86  
GCGCCTGTGGCCTAAT.GGAt.A.AGGCGCCTGACTTCTAATCAGGCG...........AtTGTGGGTTCGAGTCCCAC.CGGGCGTG scaffold_294.trna2-ArgTCT Sc: 71.86  
GCGCCCGTGGCCTAAT.GGAt.A.AGGCGTCTGACTTCTAATCAGGCG...........AtTGTGGGTTCGAGTCCCAC.CGGGCGTG scaffold_41.trna21-ArgTCT Sc: 70.40  
GCGCCCATGGCCTAAT.GGAt.A.AGGCGTCTGACTTCTAATCAGGCG...........AtTGTGGGTTCGAGTCCCAC.TGGGCGTG scaffold_190.trna1-ArgTCT Sc: 70.00  
GCGCCTGTGGCCTAATCGAT..A.AGGCGTCTGACTTCTAATCAGACG...........AtTGTGGGTTCGAGTCCCAC.CAGGCGTG scaffold_251.trna1-ArgTCT Sc: 65.05  
GCGTCCATTGTCTAAT.GGAt.A.GGACAGAGGTCTTCTAAACCTTAG...........G.TATAGGTTCAAATCCTAT.TGGACGCA scaffold_80.trna2-ArgTCT Sc: 63.63  
GCGTCCATTGTCTAAT.GGAt.A.GGACAGAGGTCTTCTAAACCTTAG...........G.TATAGGTTCAAATCCTAT.TGGACGCA scaffold_54.trna6-ArgTCT Sc: 63.63  
GCGTCCATTGTCTAAT.GGAt.A.GGACAGAGGTCTTCTAAACCTTAG...........G.TATAGGTTCAAATCCTAT.TGGACGCA scaffold_366.trna1-ArgTCT Sc: 63.63  
GCGTCCATTGTCTAAT.GGAt.A.GGACAGAGGTCTTCTAAACCTTAG...........G.TATAGGTTCAAATCCTAT.TGGACGCA scaffold_29.trna2-ArgTCT Sc: 63.63  
GCGTCCATTGTCTAAT.GGAt.A.GGACAGAGGTCTTCTAAACCTTAG...........G.TATAGGTTCAAATCCTAT.TGGACGCA scaffold_262.trna7-ArgTCT Sc: 63.63  
GCGTCCATTGTCTAAT.GGAt.A.GGACAGAGGTCTTCTAAACCTTAG...........G.TATAGGTTCAAATCCTAT.TGGACGCA scaffold_262.trna46-ArgTCT Sc: 63.63  
GCGTCCATTGTCTAAT.GGAt.A.GGACAGAGGTCTTCTAAACCTTAG...........G.TATAGGTTCAAATCCTAT.TGGACGCA scaffold_2028.trna2-ArgTCT Sc: 63.63  
GCGTCCATTGTCTAAT.GGAt.A.GGACAGAGGTCTTCTAAACCTTAG...........G.TATAGGTTCAAATCCTAT.TGGACGCA scaffold_1513.trna1-ArgTCT Sc: 63.63  
GCGTCCATTGTCTAAT.GGAt.A.GGACAGAGGTCTTCTAAACCTTAG...........G.TATAGGTTCAAATCCTAT.TGGACGCA scaffold_1293.trna1-ArgTCT Sc: 63.63  
GCGTCCATTGTCTAAT.GGAt.A.GGACAGAGGTCTTCTAAACCTTAG...........G.TATAGGTTCAAATCCTAT.TGGACGCA scaffold_1273.trna3-ArgTCT Sc: 63.63  
>>.>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<.<<.
GCACCCATGGCCTAAT.GGAt.A.AGGCACCTGACTTCTAATCAGGTG...........AtTATGGGTTTGAGTCCCAT.TGGG.GCG scaffold_88.trna3-ArgTCT Sc: 56.67  



Asn tRNAs


>>>>>>...>>>>..........<<<<.>.>>>.......<<<.<.................>>>>.......<<<<..<<<<<<.
TCCTCAGTAGCTCAAT.GGT.A.GAGTGGTCGACTATTAATTGTCTG...........GtCATAGGTTCAAATCCTACATGGGGAG scaffold_17.trna2-AsnATT Sc: 56.51  
.>>>>>>..>>>>..........<<<<..>>>>.......<<<<.................>>>>>.......<<<<<<<<<<<..
GCTAGAATAGCTCAATTGATtA.GAGCACGTGATTATTAATCACAAG...........GtTGAAGGTTTAACCCCTTCTTCTAGGC scaffold_133.trna11-AsnATT Sc: 42.40  

>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GCTGGAATAGCTCAGTTGGTtA.GAGCGTGTGGCTGTTAACCACAAG...........GtCGGAGGTTCAAACCCTCCTTCTAGCG scaffold_15.trna6-AsnGTT Sc: 83.49  
GCTGGAATAGCTCAGTTGGTtA.GAGCGTGTGGCTGTTAACCACAAG...........GtCGAAGGTTCAAACCCTTCTTCTAGCG scaffold_13.trna11-AsnGTT Sc: 82.98  
GCTGGAATAGCTCAGTTGGTtA.GAGCGTGTGGCTGTTAACCACAAG...........GtCGGAGGTTCAAGCCCTCCTTCTAGCG scaffold_82.trna8-AsnGTT Sc: 81.83  
GCTGGAATAGCTCAGTTGGTtA.GAGCGTGTGGCTGTTAACCACAAG...........GtCGGAGGTTCAAGCCCTCCTTCTAGCG scaffold_77.trna6-AsnGTT Sc: 81.83  
GCTGGAATAGCTCAGTTGGTtA.GAGCGTGTGGCTGTTAACCACAAG...........GtCGGAGGTTCAAGCCCTCCTTCTAGCG scaffold_55.trna2-AsnGTT Sc: 81.83  
GCTGGAATAGCTCAGTTGGTtA.GAGCGTGTGGCTGTTAACCACAAG...........GtCGGAGGTTCAAGCCCTCCTTCTAGCG scaffold_40.trna2-AsnGTT Sc: 81.83  
GCTGGAATAGCTCAGTTGGTtA.GAGCGTGTGGCTGTTAACCACAAG...........GtCGGAGGTTCAAGCCCTCCTTCTAGCG scaffold_30.trna7-AsnGTT Sc: 81.83  
GCTGGAATAGCTCAGTTGGTtA.GAGCGTGTGGCTGTTAACCACAAG...........GtCGGAGGTTCAAGCCCTCCTTCTAGCG scaffold_24.trna5-AsnGTT Sc: 81.83  
GCTGGAATAGCTCAGTTGGTtA.GAGCGTGTGGCTGTTAACCACAAG...........GtCGGAGGTTCAAGCCCTCCTTCTAGCG scaffold_172.trna1-AsnGTT Sc: 81.83  
GCTGGAATAGCTCAGTTGGTtA.GAGCGTGTGGCTGTTAACCACAAG...........GtCGGAGGTTCAAGCCCTCCTTCTAGCG scaffold_170.trna5-AsnGTT Sc: 81.83  
GCTGGAATAGCTCAGTTGGTtA.GAGCGTGTGGCTGTTAACCACAAG...........GtCGGAGGTTCAAGCCCTCCTTCTAGCG scaffold_159.trna1-AsnGTT Sc: 81.83  
GCTGGAATAGCTCAGTTGGTtA.GAGCGTGTGGCTGTTAACCACAAG...........GtCGGAGGTTCAAGCCCTCCTTCTAGCG scaffold_15.trna21-AsnGTT Sc: 81.83  
GCTGGAATAGCTCAGTTGGTtA.GAGCGTGTGGCTGTTAACCACAAG...........GtCGGAGGTTCAAGCCCTCCTTCTAGCG scaffold_144.trna1-AsnGTT Sc: 81.83  
GCTGGAATAGCTCAGTTGGTtA.GAGCGTGTGGCTGTTAACCACAAG...........GtCGGAGGTTCAAGCCCTCCTTCTAGCG scaffold_128.trna4-AsnGTT Sc: 81.83  
GCTGGAATAGCTCAGTTGGTtA.GAGCGTGTGGCTGTTAACCACAAG...........GtCGGAGGTTCAAGCCCTCCTTCTAGCG scaffold_127.trna2-AsnGTT Sc: 81.83  
GCTGGAATAGCTCAGTTGGTtA.GAGCGTGTGGCTGTTAACCACAAG...........GtCGAAGGTTCAAGCCCTTCTTCTAGCG scaffold_190.trna7-AsnGTT Sc: 81.33  
GCTGGAATAGCTCAGTTGGTtA.GAGCGTGTGGCTGTTAACCACAAG...........GtCGGAGGTTCAACCCCTCCTTCTAGCG scaffold_29.trna1-AsnGTT Sc: 80.56  
TCCTCTGTAGTTCAGTCGGT.A.GAACGGCGGACTGTTAATCCGTAT...........GtCACTGGTTCGAGTCCAGTCAGAGGAG scaffold_335.trna1-AsnGTT Sc: 80.09  
GCTGGAATAGCTCAGTTGGTtA.GAGCGTGTGGCTGTTAACCACAAG...........GtCGAAGGTTCAACCCCTTCTTCTAGCG scaffold_52.trna15-AsnGTT Sc: 80.05  
GCTGGAGTAGCTCAGTTGGTtA.GAGCGTGTGGCTGTTAACCACAAG...........GtCGAAGGTTCAAACCCTTCTTCTAGCG scaffold_288.trna1-AsnGTT Sc: 79.75  
GCTGGAATAGCTCAGTTGGCtA.GAGCGTGTGGCTGTTAACCACAAG...........GtCGGAGGTTCAAGCCCTCCTTCTAGCG scaffold_178.trna1-AsnGTT Sc: 77.92  
GCTGGAATAGCTCAGTTGGCtA.GAGCGTGTGGCTGTTAACCACAAG...........GtCGAAGGTTCAAGCCCTTCTTCTAGCG scaffold_88.trna10-AsnGTT Sc: 77.41  
TCCTCAGTAGCTCAGT.GGT.A.GAGCGGTCGGCTGTTAACTGACTG...........GtCGTAGGTTCGAATCCTACTTGGGGAG scaffold_262.trna56-AsnGTT Sc: 77.16  
TCCTCAGTAGCTCAGT.GGT.A.GAGCGGTCGGCTGTTAACTGACTG...........GtCGTAGGTTCGAATCCTACTTGGGGAG scaffold_262.trna41-AsnGTT Sc: 77.16  
TCCTCAGTAGCTCAGT.GGT.A.GAGCGGTCGGCTGTTAACTGACTG...........GtCGTAGGTTCGAATCCTACTTGGGGAG scaffold_262.trna29-AsnGTT Sc: 77.16  
TCCTCAGTAGCTCAGT.GGT.A.GAGCGGTCGGCTGTTAACTGACTG...........GtCGTAGGTTCGAATCCTACTTGGGGAG scaffold_262.trna16-AsnGTT Sc: 77.16  
TCCTCAGTAGCTCAGT.GGT.A.GAGCGGTCGGCTGTTAACTGACTG...........GtCGTAGGTTCGAATCCTACTTGGGGAG scaffold_2081.trna2-AsnGTT Sc: 77.16  
GCTGGAATAGCTCAGTTGATtA.GAGCGTGTGGTTGTTAACCACAAG...........GtCGGAGGTTCAAGCCCTCTTTCTAGCG scaffold_293.trna1-AsnGTT Sc: 69.33  



Asp tRNAs



>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GTCGTTGTAGTATAGT.GGTgA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG scaffold_87.trna3-AspGTC Sc: 70.78  
GTCGTTGTAGTATAGT.GGTgA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG scaffold_165.trna1-AspGTC Sc: 70.78  
GTCGTTGTAGTATAGT.GGTaA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG scaffold_93.trna3-AspGTC Sc: 69.46  
GTCGTTGTAGTATAGT.GGTaA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG scaffold_92.trna1-AspGTC Sc: 69.46  
GTCGTTGTAGTATAGT.GGTaA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG scaffold_83.trna1-AspGTC Sc: 69.46  
GTCGTTGTAGTATAGT.GGTaA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG scaffold_76.trna6-AspGTC Sc: 69.46  
GTCGTTGTAGTATAGT.GGTaA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG scaffold_74.trna1-AspGTC Sc: 69.46  
GTCGTTGTAGTATAGT.GGTaA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG scaffold_63.trna8-AspGTC Sc: 69.46  
GTCGTTGTAGTATAGT.GGTaA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG scaffold_63.trna11-AspGTC Sc: 69.46  
GTCGTTGTAGTATAGT.GGTaA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG scaffold_46.trna5-AspGTC Sc: 69.46  
GTCGTTGTAGTATAGT.GGTaA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG scaffold_306.trna1-AspGTC Sc: 69.46  
GTCGTTGTAGTATAGT.GGTaA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG scaffold_301.trna1-AspGTC Sc: 69.46  
GTCGTTGTAGTATAGT.GGTaA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG scaffold_26.trna14-AspGTC Sc: 69.46  
GTCGTTGTAGTATAGT.GGTaA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG scaffold_26.trna13-AspGTC Sc: 69.46  
GTCGTTGTAGTATAGT.GGTaA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG scaffold_207.trna1-AspGTC Sc: 69.46  
GTCGTTGTAGTATAGT.GGTaA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG scaffold_167.trna2-AspGTC Sc: 69.46  
GTCGTTGTAGTATAGT.GGTaA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG scaffold_165.trna2-AspGTC Sc: 69.46  
GTCGTTGTAGTATAGT.GGTaA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG scaffold_164.trna1-AspGTC Sc: 69.46  
GTCGTTGTAGTATAGT.GGTaA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG scaffold_137.trna1-AspGTC Sc: 69.46  
GTCGTTGTAGTATAGT.GGTaA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG scaffold_112.trna4-AspGTC Sc: 69.46  
GTCGTTGTAGTATAGT.GGTaA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG scaffold_10.trna9-AspGTC Sc: 69.46  
GTCGTTGTAGTATAGT.GGTaA.GTATTTCCGCCTGTCACGCGGACG...........A.CCCGGGTTCGATCCCCGGCAACGGCG scaffold_93.trna1-AspGTC Sc: 67.62  
GTCGTTGTAGTATAGT.GGTaA.GTATTTCCGCCTGTCACGCGGACG...........A.CCCGGGTTCGATCCCCGGCAACGGCG scaffold_48.trna2-AspGTC Sc: 67.62  
GTCGTTGTAGTATAGT.GGTaA.GTATTTCCGCCTGTCACGCGGACG...........A.CCCGGGTTCGATCCCCGGCAACGGCG scaffold_26.trna17-AspGTC Sc: 67.62  
GTCGTTGTAGTATAGT.GGTaA.GTATTTCCGCCTGTCACGCGGACG...........A.CCCGGGTTCGATCCCCGGCAACGGCG scaffold_212.trna1-AspGTC Sc: 67.62  
GTCGTTGTAGTATAGT.GGTaA.GTATTTCCGCCTGTCACGCGGACG...........A.CCCGGGTTCGATCCCCGGCAACGGCG scaffold_190.trna5-AspGTC Sc: 67.62  
GTCGTTGTAGTATAGT.GGTaA.GTATTTCCGCCTGTCACGCGGACG...........A.CCCGGGTTCGATCCCCGGCAACGGCG scaffold_15.trna17-AspGTC Sc: 67.62  
GTCGTTGTAGTATAGT.GGTaA.GTATTTCCGCCTGTCACGCGGACG...........A.TCCGGGTTCGATCCCCGGCAACGGCG scaffold_169.trna1-AspGTC Sc: 64.96  
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>.>>.......<<.<<<<<<<<<.
GTCGTTGTAGTATAGT.GGTaA.GTATTCCCGCCTGTCACGCGGGTG...........A.CCCTGGTTCGATCCCCGGCAACGGCG scaffold_59.trna2-AspGTC Sc: 62.47  
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GGGATTGTAGTTCAATTGGTcA.GAGCACCGCCCTGTCAAGGCGGAA...........GcTGCGGGTTCGAGCCCCGTCAGTCCCG scaffold_988.trna3-AspGTC Sc: 61.37  
GGGATTGTAGTTCAATTGGTcA.GAGCACCGCCCTGTCAAGGCGGAA...........GcTGCGGGTTCGAGCCCCGTCAGTCCCG scaffold_467.trna8-AspGTC Sc: 61.37  
GGGATTGTAGTTCAATTGGTcA.GAGCACCGCCCTGTCAAGGCGGAA...........GcTGCGGGTTCGAGCCCCGTCAGTCCCG scaffold_438.trna8-AspGTC Sc: 61.37  
GGGATTGTAGTTCAATTGGTcA.GAGCACCGCCCTGTCAAGGCGGAA...........GcTGCGGGTTCGAGCCCCGTCAGTCCCG scaffold_2641.trna1-AspGTC Sc: 61.37  
GGGATTGTAGTTCAATTGGTcA.GAGCACCGCCCTGTCAAGGCGGAA...........GcTGCGGGTTCGAGCCCCGTCAGTCCCG scaffold_262.trna64-AspGTC Sc: 61.37  
GGGATTGTAGTTCAATTGGTcA.GAGCACCGCCCTGTCAAGGCGGAA...........GcTGCGGGTTCGAGCCCCGTCAGTCCCG scaffold_262.trna23-AspGTC Sc: 61.37  
GGGATTGTAGTTCAATTGGTcA.GAGCACCGCCCTGTCAAGGCGGAA...........GcTGCGGGTTCGAGCCCCGTCAGTCCCG scaffold_2336.trna3-AspGTC Sc: 61.37  
GGGATTGTAGTTCAATTGGTcA.GAGCACCGCCCTGTCAAGGCGGAA...........GcTGCGGGTTCGAGCCCCGTCAGTCCCG scaffold_1339.trna3-AspGTC Sc: 61.37  
>>>>>>>..>>.>..........<.<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GTCGTTGTAATATATT.GGTaA.GCATTCCCGCCTGTCACGCGGGTG...........A.CCCGGGTTCGATCCCCGGCAACGGCG scaffold_115.trna1-AspGTC Sc: 56.33  
.>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<..
TTTGTTGTAGTATAGT.GGTaA.GTATTCCCGCCTGTCAAGCGGGTG...........A.CCCGGGTTCAATCCCTGGCAACGACA scaffold_6.trna5-AspGTC Sc: 54.95  
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GGGATTGTAGTTTAATTGGTcA.GAGCACCGCCCTGTCAAGGCGGAA...........GcTGCGGGTTCGAGCCTCGTCAGTCCCG scaffold_27.trna4-AspGTC Sc: 54.55  



Cys tRNAs



>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<.
GGGTCCATAGCTCAGTGGT.A.GAGCATTTGACTGCAGATCAAGAG...........GtCACCGGTTCGAACCCGGT.TGGGCCCT scaffold_92.trna7-CysGCA Sc: 78.18  
GGGTCCATAGCTCAGTGGT.A.GAGCATTTGACTGCAGATCAAGAG...........GtCACCGGTTCGAACCCGGT.TGGGCCCT scaffold_78.trna8-CysGCA Sc: 78.18  
GGGTCCATAGCTCAGTGGT.A.GAGCATTTGACTGCAGATCAAGAG...........GtCACCGGTTCGAACCCGGT.TGGGCCCT scaffold_76.trna1-CysGCA Sc: 78.18  
GGGTCCATAGCTCAGTGGT.A.GAGCATTTGACTGCAGATCAAGAG...........GtCACCGGTTCGAACCCGGT.TGGGCCCT scaffold_63.trna7-CysGCA Sc: 78.18  
GGGTCCATAGCTCAGTGGT.A.GAGCATTTGACTGCAGATCAAGAG...........GtCACCGGTTCGAACCCGGT.TGGGCCCT scaffold_52.trna16-CysGCA Sc: 78.18  
GGGTCCATAGCTCAGTGGT.A.GAGCATTTGACTGCAGATCAAGAG...........GtCACCGGTTCGAACCCGGT.TGGGCCCT scaffold_41.trna11-CysGCA Sc: 78.18  
GGGTCCATAGCTCAGTGGT.A.GAGCATTTGACTGCAGATCAAGAG...........GtCACCGGTTCGAACCCGGT.TGGGCCCT scaffold_233.trna1-CysGCA Sc: 78.18  
GGGTCCATAGCTCAGTGGT.A.GAGCATTTGACTGCAGATCAAGAG...........GtCACCGGTTCGAACCCGGT.TGGGCCCT scaffold_22.trna5-CysGCA Sc: 78.18  
GGGTCCATAGCTCAGTGGT.A.GAGCATTTGACTGCAGATCAAGAG...........GtCACCGGTTCGAACCCGGT.TGGGCCCT scaffold_21.trna15-CysGCA Sc: 78.18  
GGGTCCATAGCTCAGTGGT.A.GAGCATTTGACTGCAGATCAAGAG...........GtCACCGGTTCGAACCCGGT.TGGGCCCT scaffold_206.trna1-CysGCA Sc: 78.18  
GGGTCCATAGCTCAGTGGT.A.GAGCATTTGACTGCAGATCAAGAG...........GtCACCGGTTCGAACCCGGT.TGGGCCCT scaffold_202.trna3-CysGCA Sc: 78.18  
GGGTCCATAGCTCAGTGGT.A.GAGCATTTGACTGCAGATCAAGAG...........GtCACCGGTTCGAACCCGGT.TGGGCCCT scaffold_130.trna1-CysGCA Sc: 78.18  
GGGTCCATAGCTCAGTGGT.A.GAGCATTTGACTGCAGATCAAGAG...........GtCACCGGTTCGAACCCGGT.TGGGCCCT scaffold_104.trna1-CysGCA Sc: 78.18  
GGGTCCATAGCTCAGTGGT.A.GAGCATTTGACTGCAGATCAAGAG...........GtCACCGGTTCGAACCCGGT.TGGGCCCT scaffold_1.trna1-CysGCA Sc: 78.18  
>>>>>>>..>>>...........<<<.>>>>>.......<<<<<................>>>.>.......<.<<<.<<<<<<<.
GGCGGCATGGCCGAGTGGT.A.AGGCGGGGGACTGCAAATCCTTT............TtCCCCAGTTCAAATCCGGG.TGTCGCCT scaffold_988.trna4-CysGCA Sc: 61.32  
GGCGGCATGGCCGAGTGGT.A.AGGCGGGGGACTGCAAATCCTTT............TtCCCCAGTTCAAATCCGGG.TGTCGCCT scaffold_672.trna1-CysGCA Sc: 61.32  
GGCGGCATGGCCGAGTGGT.A.AGGCGGGGGACTGCAAATCCTTT............TtCCCCAGTTCAAATCCGGG.TGTCGCCT scaffold_467.trna1-CysGCA Sc: 61.32  
GGCGGCATGGCCGAGTGGT.A.AGGCGGGGGACTGCAAATCCTTT............TtCCCCAGTTCAAATCCGGG.TGTCGCCT scaffold_438.trna1-CysGCA Sc: 61.32  
GGCGGCATGGCCGAGTGGT.A.AGGCGGGGGACTGCAAATCCTTT............TtCCCCAGTTCAAATCCGGG.TGTCGCCT scaffold_2641.trna2-CysGCA Sc: 61.32  
GGCGGCATGGCCGAGTGGT.A.AGGCGGGGGACTGCAAATCCTTT............TtCCCCAGTTCAAATCCGGG.TGTCGCCT scaffold_262.trna8-CysGCA Sc: 61.32  
GGCGGCATGGCCGAGTGGT.A.AGGCGGGGGACTGCAAATCCTTT............TtCCCCAGTTCAAATCCGGG.TGTCGCCT scaffold_262.trna47-CysGCA Sc: 61.32  
GGCGGCATGGCCGAGTGGT.A.AGGCGGGGGACTGCAAATCCTTT............TtCCCCAGTTCAAATCCGGG.TGTCGCCT scaffold_262.trna37-CysGCA Sc: 61.32  
GGCGGCATGGCCGAGTGGT.A.AGGCGGGGGACTGCAAATCCTTT............TtCCCCAGTTCAAATCCGGG.TGTCGCCT scaffold_2336.trna4-CysGCA Sc: 61.32  
GGCGGCATGGCCGAGTGGT.A.AGGCGGGGGACTGCAAATCCTTT............TtCCCCAGTTCAAATCCGGG.TGTCGCCT scaffold_2202.trna1-CysGCA Sc: 61.32  
GGCGGCATGGCCGAGTGGT.A.AGGCGGGGGACTGCAAATCCTTT............TtCCCCAGTTCAAATCCGGG.TGTCGCCT scaffold_2041.trna1-CysGCA Sc: 61.32  
GGCGGCATGGCCGAGTGGT.A.AGGCGGGGGACTGCAAATCCTTT............TtCCCCAGTTCAAATCCGGG.TGTCGCCT scaffold_1379.trna1-CysGCA Sc: 61.32  
>>>>>>>..>>>...........<<<..>>>>.......<<<<.................>>>>>.......<<<<<.<<<<<<<.
GGAACCGTAGCCAAGTGGCtA.AGGCATGAGTCTGCAAGACTTCTA...........TtCGTCGGTTGGAATCCGAC.CGGTTCCT scaffold_1973.trna1-CysGCA Sc: 41.47  
GGAACCGTAGCCAAGTGGCtA.AGGCATGAGTCTGCAAGACTTCTA...........TtCGTCGGTTGGAATCCGAC.CGGTTCCT scaffold_1175.trna2-CysGCA Sc: 41.47  



Gln tRNAs


>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<..................>>>>>........<<<<<.<<<<<<<.
GGTCCCATGGTCTAGTGGTtA.GGACATTGGACTCTGAATCCAGTA.............A.CCCGAG.TTCAAATCTCGG.TGGGACCT scaffold_53.trna7-GlnCTG Sc: 74.02  
GGTCCCATGGTCTAGTGGTtA.GGACATTGGACTCTGAATCCAGTA.............A.CCCGAG.TTCAAATCTCGG.TGGGACCT scaffold_27.trna1-GlnCTG Sc: 74.02  
GGTCCCATGGTCTAGTGGTtA.GGACATTGGACTCTGAATCCAGTA.............A.CCCGAG.TTCAAATCTCGG.TGGGACCT scaffold_165.trna3-GlnCTG Sc: 74.02  
GGTTCCATGGTCTAGTGGTtA.GGACATTGGACTCTGAATCCAGTA.............A.CCCGAG.TTCAAATCTCGG.TGGAACCT scaffold_41.trna9-GlnCTG Sc: 73.53  
GGTCCCATGGTCTAGTGGTtA.GGACATTGGACTCTGAATCCAGTA.............A.CCCGAG.TTCAAACCTCGG.TGGGACCT scaffold_28.trna5-GlnCTG Sc: 72.63  
GGTCCCATGGTCTAGTGGTcA.GGACATTGGACTCTGAATCCAGTA.............A.CCCGAG.TTCAAATCTCGG.TGGGACCT scaffold_63.trna12-GlnCTG Sc: 71.93  
GGTCCCATGGTCTAGTGGTcA.GGACATTGGACTCTGAATCCAGTA.............A.CCCGAG.TTCAAATCTCGG.TGGGACCT scaffold_26.trna19-GlnCTG Sc: 71.93  
GGTCCCATGGTCTAGTGGTcA.GGACATTGGACTCTGAATCCAGTA.............A.CCCGAG.TTCAAATCTCGG.TGGGACCT scaffold_248.trna1-GlnCTG Sc: 71.93  
GGTCCCATGGTCTAGTGGTcA.GGACATTGGACTCTGAATCCAGTA.............A.CCCGAG.TTCAAATCTCGG.TGGGACCT scaffold_169.trna2-GlnCTG Sc: 71.93  
GGTCCCATGGTCTAGTGGTcA.GGACATTGGACTCTGAATCCAGTA.............A.CCCGAG.TTCAAATCTCGG.TGGGACCT scaffold_13.trna4-GlnCTG Sc: 71.93  
GGTCCCATGGTCTAGTGGTcA.GGACATTGGACTCTGAATCCAGTA.............A.CCCGAG.TTCAAATCTCGG.TGGGACCT scaffold_118.trna5-GlnCTG Sc: 71.93  
GGTCCCATGGTCTAGTGGTcA.GGACATTGGACTCTGAATCCAGTA.............A.CCCGAG.TTCAAATCTCGG.TGGGACCT scaffold_112.trna1-GlnCTG Sc: 71.93  
GGTCCTATGGTCTAGTGGTcA.GGACATTGGACTCTGAATCCAGTA.............A.CCCGAG.TTCAAATCTCGG.TAGGACCT scaffold_49.trna5-GlnCTG Sc: 70.67  

>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<..................>>>>>........<<<<<.<<<<<<<.
GGTTCTATGGTGTAGTGGTtA.GCACTCTGGACTTTGAATCCAGCG.............A.CCTGGG.TTCGACTCCCGG.TAGGACCT scaffold_92.trna8-GlnTTG Sc: 74.09  
GGTTCTATGGTGTAGTGGTtA.GCACTCTGGACTTTGAATCCAGCG.............A.CCTGGG.TTCGACTCCCGG.TAGGACCT scaffold_78.trna11-GlnTTG Sc: 74.09  
GGTTCTATGGTGTAGTGGTtA.GCACTCTGGACTTTGAATCCAGCG.............A.CCTGGG.TTCGACTCCCGG.TAGGACCT scaffold_75.trna2-GlnTTG Sc: 74.09  
GGTTCTATGGTGTAGTGGTtA.GCACTCTGGACTTTGAATCCAGCG.............A.CCTGGG.TTCGACTCCCGG.TAGGACCT scaffold_7.trna4-GlnTTG Sc: 74.09  
GGTTCTATGGTGTAGTGGTtA.GCACTCTGGACTTTGAATCCAGCG.............A.CCTGGG.TTCGACTCCCGG.TAGGACCT scaffold_65.trna8-GlnTTG Sc: 74.09  
GGTTCTATGGTGTAGTGGTtA.GCACTCTGGACTTTGAATCCAGCG.............A.CCTGGG.TTCGACTCCCGG.TAGGACCT scaffold_40.trna5-GlnTTG Sc: 74.09  
GGTTCTATGGTGTAGTGGTtA.GCACTCTGGACTTTGAATCCAGCG.............A.CCTGGG.TTCGACTCCCGG.TAGGACCT scaffold_33.trna1-GlnTTG Sc: 74.09  
GGTTCTATGGTGTAGTGGTtA.GCACTCTGGACTTTGAATCCAGCG.............A.CCTGGG.TTCGACTCCCGG.TAGGACCT scaffold_3.trna2-GlnTTG Sc: 74.09  
GGTTCTATGGTGTAGTGGTtA.GCACTCTGGACTTTGAATCCAGCG.............A.CCTGGG.TTCGACTCCCGG.TAGGACCT scaffold_22.trna4-GlnTTG Sc: 74.09  
GGTTCTATGGTGTAGTGGTtA.GCACTCTGGACTTTGAATCCAGCG.............A.CCTGGG.TTCGACTCCCGG.TAGGACCT scaffold_21.trna3-GlnTTG Sc: 74.09  
GGTTCTATGGTGTAGTGGTtA.GCACTCTGGACTTTGAATCCAGCG.............A.CCTGGG.TTCGACTCCCGG.TAGGACCT scaffold_100.trna3-GlnTTG Sc: 74.09  
GGTTCTATGGTGTAGTGGTtA.GCACTTTGGACTTTGAATCCAGC..............A.ACCTGGaTTCGAATCCAGG.TAGGACCT scaffold_125.trna1-GlnTTG Sc: 57.03  
>>>>>>>..>>>...........<<<..>>>>.......<<<<...................>>>>>........<<<<<.<<<<<<<.
TGGGGCGTGGCCAAGTGGT.A.AGGCAACGGGTTTTGGTCCCGCTA.............TtCGGAGG.TTCGAATCCTTC.CGTCCCAG scaffold_683.trna2-GlnTTG Sc: 55.28  
TGGGGCGTGGCCAAGTGGT.A.AGGCAACGGGTTTTGGTCCCGCTA.............TtCGGAGG.TTCGAATCCTTC.CGTCCCAG scaffold_262.trna66-GlnTTG Sc: 55.28  
TGGGGCGTGGCCAAGTGGT.A.AGGCAACGGGTTTTGGTCCCGCTA.............TtCGGAGG.TTCGAATCCTTC.CGTCCCAG scaffold_262.trna25-GlnTTG Sc: 55.28  
TGGGGCGTGGCCAAGTGGT.A.AGGCAACGGGTTTTGGTCCCGCTA.............TtCGGAGG.TTCGAATCCTTC.CGTCCCAG scaffold_1824.trna1-GlnTTG Sc: 55.28  
TGGGGCGTGGCCAAGTGGT.A.AGGCAACGGGTTTTGGTCCCGCTA.............TtCGGAGG.TTCGAATCCTTC.CGTCCCAG scaffold_1293.trna3-GlnTTG Sc: 55.28  
TGGGGCGTGGCCAAGTGGT.A.AGGCAACGGGTTTTGGTCCCGCTA.............TtCGGAGG.TTCGAATCCTTC.CGTCCCAG scaffold_1273.trna2-GlnTTG Sc: 55.28  
>>>>>>>..>>>...........<<<.>>>>>.......<<<<<..................>>>>>........<<<<<.<<<<<<<.
TGGAGTATAGCCAAGTGGT.A.AGGCATCGGTTTTTGGTACCGGC.AT...........G.CAAAGG.TTCGAATCCTTT.TACTCCAG scaffold_1632.trna1-GlnTTG Sc: 51.09  
TGGAGTATAGCCAAGTGGT.A.AGGCATCGGTTTTTGGTACCGGC.AT...........G.CAAAGG.TTCGAATCCTTT.TACTCCAG scaffold_1385.trna2-GlnTTG Sc: 51.09  
>.>>>>>..>>>...........<<<..>>>>.......<<<<...................>>>>>........<<<<<.<<<<<.<.
TGGGGCGTGGCCAAGTGGT.A.AGGCAACGGGTTTTGGTCCCGCTA.............TtGGGAGG.TTTGAATCCTTC.CGTCCGAG scaffold_100.trna4-GlnTTG Sc: 36.80  



Glu tRNAs


>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.
TCCGTTGTAGTCTAGTTGGTtA.GGATACTCGGCTCTCACCCGAGAG...........ACCCGGGTTCAAATCCCGGCAACGGAA scaffold_136.trna3-GluCTC Sc: 81.44  
TCCGTTGTAGTCTAGTTGGTtA.GGATACTCGGCTCTCACCCGAGAG...........ACCCGGGTTCAAGTCCCGGCAACGGAA scaffold_98.trna1-GluCTC Sc: 79.78  
TCCGTTGTAGTCTAGTTGGTtA.GGATACTCGGCTCTCACCCGAGAG...........ACCCGGGTTCAAGTCCCGGCAACGGAA scaffold_53.trna1-GluCTC Sc: 79.78  
TCCGTTGTAGTCTAGTTGGTtA.GGATACTCGGCTCTCACCCGAGAG...........ACCCGGGTTCAAGTCCCGGCAACGGAA scaffold_3.trna21-GluCTC Sc: 79.78  
TCCGTTGTAGTCTAGTTGGTtA.GGATACTCGGCTCTCACCCGAGAG...........ACCCGGGTTCAAGTCCCGGCAACGGAA scaffold_22.trna23-GluCTC Sc: 79.78  
TCCGTTGTAGTCTAGTTGGTtA.GGATACTCGGCTCTCACCCGAGAG...........ACCCGGGTTCAAGTCCCGGCAACGGAA scaffold_169.trna4-GluCTC Sc: 79.78  
TCCGTTGTAGTCTAGTTGGTtA.GGATACTCGGCTCTCACCCGAGAG...........ACCCGGGTTCAAGTCCCGGCAACGGAA scaffold_131.trna2-GluCTC Sc: 79.78  
TCCGTTGTAGTCTAGTTGGTtA.GGATACTCGGCTCTCACCCGAGAG...........ACCCGGGTTCAAGTCCCGGCAACGGAA scaffold_13.trna15-GluCTC Sc: 79.78  
TCCGTTGTAGTCTAGTTGGTtA.GGATACTCGGCTCTCACCCGAGAG...........ACCCGGGTTCAAGTCCCGGCAACGGAA scaffold_10.trna5-GluCTC Sc: 79.78  
TCCGTTGTAGTCTAGTTGGTtA.GGATATTCGGCTCTCACCCGAAAG...........ACCCGGGTTCAAGTCCCGGCAACGGAA scaffold_53.trna8-GluCTC Sc: 79.40  
TCCGTTGTAGTCTAGTTGGTtA.GGATATTCGGCTCTCACCCGAAAG...........ACCCGGGTTCAAGTCCCGGCAACGGAA scaffold_41.trna10-GluCTC Sc: 79.40  
TCCGTTGTAGTCTAGTTGGTtA.GGATATTCGGCTCTCACCCGAAAG...........ACCCGGGTTCAAGTCCCGGCAACGGAA scaffold_30.trna15-GluCTC Sc: 79.40  
TCCGTTGTAGTCTAGTTGGTtA.GGATATTCGGCTCTCACCCGAAAG...........ACCCGGGTTCAAGTCCCGGCAACGGAA scaffold_27.trna5-GluCTC Sc: 79.40  
TCCGTTGTAGTCTAGTTGGTtA.GGATATTCGGCTCTCACCCGAAAG...........ACCCGGGTTCAAGTCCCGGCAACGGAA scaffold_144.trna3-GluCTC Sc: 79.40  
TCCGTTGTAGTCTAGTTGGTtA.GGATATTCGGCTCTCACCCGAAAG...........ACCCGGGTTCAAGTCCCGGCAACGGAA scaffold_10.trna4-GluCTC Sc: 79.40  
TCCGTTGTAGTCTAGTTGGTcA.GGATATTCGGCTCTCACCCGAAAG...........ACCCGGGTTCAAGTCCCGGCAACGGAA scaffold_70.trna10-GluCTC Sc: 77.31  
TCCGTTGTAGTCTAGTTGGTcA.GGATATTCGGCTCTCACCCGAAAG...........ACCCGGGTTCAAGTCCCGGCAACGGAA scaffold_35.trna14-GluCTC Sc: 77.31  
TCCGTTGTAGTCTAGTTGGTcA.GGATATTCGGCTCTCACCCGAAAG...........ACCCGGGTTCAAGTCCCGGCAACGGAA scaffold_178.trna2-GluCTC Sc: 77.31  
TCCGTTGTAGTCTAGTTGGTcA.GGATATTCGGCTCTCACCCGAAAG...........ACCCGGGTTCAAGTCCCGGCAACGGAA scaffold_160.trna1-GluCTC Sc: 77.31  
TCCGTTGTAGTCTAGTTGGTcA.GGATATTCGGCTCTCACCCGAAAG...........ACCCGGGTTCAAGTCCCGGCAACGGAA scaffold_136.trna1-GluCTC Sc: 77.31  
TCCGTTGTAGTCTAGTTGGTcA.GGATATTCGGCTCTCACCCGAAAG...........ACCCGGGTTCAAGTCCCGGCAACGGAA scaffold_13.trna14-GluCTC Sc: 77.31  
TCCGTTGTAGTCTAGTTGGTtA.GGATACTCGGCTCTCACCCGAGCG...........ACCCGGGTTCAAGTCCCGGCAACGGAA scaffold_22.trna10-GluCTC Sc: 77.21  
TCCGTTGTAGTCTAGGTGGTtA.GGATACTCGGCTCTCACCCGAGAG...........ACCCGGGTTCAAGTCCCGGCAACGGAA scaffold_81.trna7-GluCTC Sc: 76.33  
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...............>.>>>.......<<<.<<<<<<<<.
TCCGTTGTAGTCTAGTTGGTtA.GGATACTCGGCTCTCACCCGAGAG...........ACCCGGGTTCATGTCCCAGCAACGGAA scaffold_73.trna3-GluCTC Sc: 64.75  

>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.
TCCATTGTCGTCCAGC.GGTtA.GGATATCTGGCTTTCACCCAGGAG...........ACCCGGGTTCGATTCCCGGCAATGGAA scaffold_93.trna5-GluTTC Sc: 72.67  
TCCATTGTCGTCCAGC.GGTtA.GGATATCTGGCTTTCACCCAGGAG...........ACCCGGGTTCGATTCCCGGCAATGGAA scaffold_8.trna18-GluTTC Sc: 72.67  
TCCATTGTCGTCCAGC.GGTtA.GGATATCTGGCTTTCACCCAGGAG...........ACCCGGGTTCGATTCCCGGCAATGGAA scaffold_8.trna17-GluTTC Sc: 72.67  
TCCATTGTCGTCCAGC.GGTtA.GGATATCTGGCTTTCACCCAGGAG...........ACCCGGGTTCGATTCCCGGCAATGGAA scaffold_248.trna2-GluTTC Sc: 72.67  
TCCATTGTCGTCCAGC.GGTtA.GGATATCTGGCTTTCACCCAGGAG...........ACCCGGGTTCGATTCCCGGCAATGGAA scaffold_148.trna4-GluTTC Sc: 72.67  
TCCATTGTCGTCCAGC.GGTtA.GGATATCTGGCTTTCACCCAGGAG...........ACCCGGGTTCGATTCCCGGCAATGGAA scaffold_112.trna2-GluTTC Sc: 72.67  
TCCATTGTCGTCCAGC.GGTtA.GGATATCTGGCTTTCACCCAGGAG...........ACCCGGGTTCGATTCCCGGCAATGGAA scaffold_111.trna3-GluTTC Sc: 72.67  
TCCATTGTCGTCCAGC.GGTtA.GGATATCTGGCTTTCACCCAGGAG...........ACCCGGGTTCGATTCCCGGCAATGGAA scaffold_111.trna2-GluTTC Sc: 72.67  
TCCGTTGTCGTCCAGC.GGTtA.GGATATCTGGCTTTCACCCAGGAG...........ACCCGGGTTCGATTCCCGGCAACGGAA scaffold_90.trna2-GluTTC Sc: 72.60  
TCCGTTGTCGTCCAGC.GGTtA.GGATATCTGGCTTTCACCCAGGAG...........ACCCGGGTTCGATTCCCGGCAACGGAA scaffold_53.trna2-GluTTC Sc: 72.60  
TCCGTTGTCGTCCAGC.GGTtA.GGATATCTGGCTTTCACCCAGGAG...........ACCCGGGTTCGATTCCCGGCAACGGAA scaffold_26.trna20-GluTTC Sc: 72.60  
TCCGTTGTCGTCCAGC.GGTtA.GGATATCTGGCTTTCACCCAGGAG...........ACCCGGGTTCGATTCCCGGCAACGGAA scaffold_169.trna5-GluTTC Sc: 72.60  
TCCGTTGTCGTCCAGC.GGTtA.GGATATCTGGCTTTCACCCAGGAG...........ACCCGGGTTCGATTCCCGGCAACGGAA scaffold_15.trna14-GluTTC Sc: 72.60  
TCCGTTGTCGTCCAGC.GGTtA.GGATATCTGGCTTTCACCCAGGAG...........ACCCGGGTTCGATTCCCGGCAACGGAA scaffold_13.trna2-GluTTC Sc: 72.60  
TCCGATGTCGTCCAGC.GGTtA.GGATATCTGGCTTTCACCCAGGAG...........ACCCGGGTTCGATTCCCGGCATCGGAA scaffold_21.trna14-GluTTC Sc: 72.52  
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...............>>.>>.......<<.<<<<<<<<<.
TCCGTTGTCGTCCAGC.GGTtA.GGATATCTGGCTTTCACCCAGGAG...........ACCCAGGTTCGATTCCCGGCAACGGAA scaffold_15.trna11-GluTTC Sc: 65.62  
>>>>>>>..>>>>..........<<<<.>>>.>.......<.<<<...............>>>>>.......<<<<<<<<<<<<.
GTCCCTTTCGTCCAGT.GGTtA.GGACATCGTCTTTTCATGTCGAAG...........ACACGGGTTCGATTCCCGTAAGGGATG scaffold_443.trna1-GluTTC Sc: 65.51  



Gly tRNAs



>>>>>>>..>>.>.........<.<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.
GCACCAGTGGTCTAGTGGT.A.GAATAGTACCCTGCCACGGTACAG...........ACCCGGGTTCGATTCCCGGCTGGTGCA scaffold_84.trna3-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGTGGT.A.GAATAGTACCCTGCCACGGTACAG...........ACCCGGGTTCGATTCCCGGCTGGTGCA scaffold_60.trna3-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGTGGT.A.GAATAGTACCCTGCCACGGTACAG...........ACCCGGGTTCGATTCCCGGCTGGTGCA scaffold_5.trna5-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGTGGT.A.GAATAGTACCCTGCCACGGTACAG...........ACCCGGGTTCGATTCCCGGCTGGTGCA scaffold_4.trna8-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGTGGT.A.GAATAGTACCCTGCCACGGTACAG...........ACCCGGGTTCGATTCCCGGCTGGTGCA scaffold_34.trna8-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGTGGT.A.GAATAGTACCCTGCCACGGTACAG...........ACCCGGGTTCGATTCCCGGCTGGTGCA scaffold_34.trna7-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGTGGT.A.GAATAGTACCCTGCCACGGTACAG...........ACCCGGGTTCGATTCCCGGCTGGTGCA scaffold_32.trna8-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGTGGT.A.GAATAGTACCCTGCCACGGTACAG...........ACCCGGGTTCGATTCCCGGCTGGTGCA scaffold_30.trna4-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGTGGT.A.GAATAGTACCCTGCCACGGTACAG...........ACCCGGGTTCGATTCCCGGCTGGTGCA scaffold_21.trna2-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGTGGT.A.GAATAGTACCCTGCCACGGTACAG...........ACCCGGGTTCGATTCCCGGCTGGTGCA scaffold_203.trna5-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGTGGT.A.GAATAGTACCCTGCCACGGTACAG...........ACCCGGGTTCGATTCCCGGCTGGTGCA scaffold_203.trna2-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGTGGT.A.GAATAGTACCCTGCCACGGTACAG...........ACCCGGGTTCGATTCCCGGCTGGTGCA scaffold_199.trna3-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGTGGT.A.GAATAGTACCCTGCCACGGTACAG...........ACCCGGGTTCGATTCCCGGCTGGTGCA scaffold_194.trna2-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGTGGT.A.GAATAGTACCCTGCCACGGTACAG...........ACCCGGGTTCGATTCCCGGCTGGTGCA scaffold_191.trna2-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGTGGT.A.GAATAGTACCCTGCCACGGTACAG...........ACCCGGGTTCGATTCCCGGCTGGTGCA scaffold_163.trna2-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGTGGT.A.GAATAGTACCCTGCCACGGTACAG...........ACCCGGGTTCGATTCCCGGCTGGTGCA scaffold_163.trna1-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGTGGT.A.GAATAGTACCCTGCCACGGTACAG...........ACCCGGGTTCGATTCCCGGCTGGTGCA scaffold_156.trna2-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGTGGT.A.GAATAGTACCCTGCCACGGTACAG...........ACCCGGGTTCGATTCCCGGCTGGTGCA scaffold_156.trna1-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGTGGT.A.GAATAGTACCCTGCCACGGTACAG...........ACCCGGGTTCGATTCCCGGCTGGTGCA scaffold_150.trna2-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGTGGT.A.GAATAGTACCCTGCCACGGTACAG...........ACCCGGGTTCGATTCCCGGCTGGTGCA scaffold_15.trna24-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGTGGT.A.GAATAGTACCCTGCCACGGTACAG...........ACCCGGGTTCGATTCCCGGCTGGTGCA scaffold_15.trna23-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGTGGT.A.GAATAGTACCCTGCCACGGTACAG...........ACCCGGGTTCGATTCCCGGCTGGTGCA scaffold_15.trna22-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGTGGT.A.GAATAGTACCCTGCCACGGTACAG...........ACCCGGGTTCGATTCCCGGCTGGTGCA scaffold_145.trna1-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGTGGT.A.GAATAGTACCCTGCCACGGTACAG...........ACCCGGGTTCGATTCCCGGCTGGTGCA scaffold_13.trna1-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGTGGT.A.GAATAGTACCCTGCCACGGTACAG...........ACCCGGGTTCGATTCCCGGCTGGTGCA scaffold_126.trna2-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGTGGT.A.GAATAGTACCCTGCCACGGTACAG...........ACCCGGGTTCGATTCCCGGCTGGTGCA scaffold_124.trna3-GlyGCC Sc: 71.56  
GCACCAGTGGTCTAGTGGT.A.GAATAGTACCCTGCCACGGTACAG...........ACCCGGGTTCGATTCCCGGCTGGTGCA scaffold_104.trna2-GlyGCC Sc: 71.56  
GCACTAGTGGTCTAGTGGT.A.GAATAGTACCCTGCCACGGTACAG...........ACCCGGGTTCGATTCCCGGCTGGTGCA scaffold_25.trna17-GlyGCC Sc: 68.93  
GCACCAGTGGTCTAGTGGC.A.GAGTAGTACCCTGCCACGGTACAG...........ACCCGGGTTCGATTCCCGGCTGGTGCA scaffold_203.trna4-GlyGCC Sc: 63.32  
>>>>>>>..>>.............<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.
GCGGATATAGTCGAATGGT.A.AAATTTCTCTTTGCCAAGGAGAAG...........ACGCGGGTTCGATTCCCGCTATCCGCC scaffold_467.trna3-GlyGCC Sc: 61.55  
GCGGATATAGTCGAATGGT.A.AAATTTCTCTTTGCCAAGGAGAAG...........ACGCGGGTTCGATTCCCGCTATCCGCC scaffold_438.trna3-GlyGCC Sc: 61.55  
GCGGATATAGTCGAATGGT.A.AAATTTCTCTTTGCCAAGGAGAAG...........ACGCGGGTTCGATTCCCGCTATCCGCC scaffold_262.trna10-GlyGCC Sc: 61.55  

>>>>>>>..>>>...........<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.
GCGCATCTGGTGTAGTGGT.A.TCATAGTACCCTCCCACGGTACTG...........ACCGGGGTTCGATTCCCCGGATGCGCA scaffold_86.trna9-GlyCCC Sc: 69.01  
GCGCATCTGGTGTAGTGGT.A.TCATAGTACCCTCCCACGGTACTG...........ACCGGGGTTCGATTCCCCGGATGCGCA scaffold_152.trna1-GlyCCC Sc: 69.01  
GCGCAACTGGTGTAGTGGT.A.TCATAGTACCCTCCCACGGTACTG...........ACCGGGGTTCGATTCCCCGGTTGCGCA scaffold_76.trna5-GlyCCC Sc: 68.96  
GCGCAACTGGTGTAGTGGT.A.TCATAGTACCCTCCCACGGTACTG...........ACCGGGGTTCGATTCCCCGGTTGCGCA scaffold_60.trna1-GlyCCC Sc: 68.96  
GCGCAACTGGTGTAGTGGT.A.TCATAGTACCCTCCCACGGTACTG...........ACCGGGGTTCGATTCCCCGGTTGCGCA scaffold_43.trna1-GlyCCC Sc: 68.96  
GCGCAACTGGTGTAGTGGT.A.TCATAGTACCCTCCCACGGTACTG...........ACCGGGGTTCGATTCCCCGGTTGCGCA scaffold_41.trna17-GlyCCC Sc: 68.96  
GCGCAACTGGTGTAGTGGT.A.TCATAGTACCCTCCCACGGTACTG...........ACCGGGGTTCGATTCCCCGGTTGCGCA scaffold_28.trna3-GlyCCC Sc: 68.96  
GCGCAACTGGTGTAGTGGT.A.TCATAGTACCCTCCCACGGTACTG...........ACCGGGGTTCGATTCCCCGGTTGCGCA scaffold_124.trna1-GlyCCC Sc: 68.96  
GCGCATCTGGTGTAGTGGT.A.TCATAGTACCCTCCCACGGTACTG...........ACCAGGGTTCGATTCCCTGGATGCGCA scaffold_82.trna3-GlyCCC Sc: 68.50  

>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.
GCGTCAGTAGTCCAACGGTtA.GGATAATTGCCTTCCAAGCAATAG...........ACCCGGGTTCGACTCCCGGCTGACGCA scaffold_30.trna9-GlyTCC Sc: 75.73  
GCGTTTGTAGTCCAACGGTtA.GGATAATTGCCTTCCAAGCAATAG...........ACCCGGGTTCGACTCCCGGCAAACGCA scaffold_98.trna3-GlyTCC Sc: 74.33  
GCGTTTGTAGTCCAACGGTtA.GGATAATTGCCTTCCAAGCAATAG...........ACCCGGGTTCGACTCCCGGCAAACGCA scaffold_88.trna2-GlyTCC Sc: 74.33  
GCGTTTGTAGTCCAACGGTtA.GGATAATTGCCTTCCAAGCAATAG...........ACCCGGGTTCGACTCCCGGCAAACGCA scaffold_76.trna3-GlyTCC Sc: 74.33  
GCGTTTGTAGTCCAACGGTtA.GGATAATTGCCTTCCAAGCAATAG...........ACCCGGGTTCGACTCCCGGCAAACGCA scaffold_70.trna4-GlyTCC Sc: 74.33  
GCGTTTGTAGTCCAACGGTtA.GGATAATTGCCTTCCAAGCAATAG...........ACCCGGGTTCGACTCCCGGCAAACGCA scaffold_59.trna5-GlyTCC Sc: 74.33  
GCGTTTGTAGTCCAACGGTtA.GGATAATTGCCTTCCAAGCAATAG...........ACCCGGGTTCGACTCCCGGCAAACGCA scaffold_41.trna13-GlyTCC Sc: 74.33  
GCGTTTGTAGTCCAACGGTtA.GGATAATTGCCTTCCAAGCAATAG...........ACCCGGGTTCGACTCCCGGCAAACGCA scaffold_4.trna2-GlyTCC Sc: 74.33  
GCGTTTGTAGTCCAACGGTtA.GGATAATTGCCTTCCAAGCAATAG...........ACCCGGGTTCGACTCCCGGCAAACGCA scaffold_3.trna5-GlyTCC Sc: 74.33  
GCGTTTGTAGTCCAACGGTtA.GGATAATTGCCTTCCAAGCAATAG...........ACCCGGGTTCGACTCCCGGCAAACGCA scaffold_3.trna20-GlyTCC Sc: 74.33  
GCGTTTGTAGTCCAACGGTtA.GGATAATTGCCTTCCAAGCAATAG...........ACCCGGGTTCGACTCCCGGCAAACGCA scaffold_22.trna9-GlyTCC Sc: 74.33  
GCGTTTGTAGTCCAACGGTtA.GGATAATTGCCTTCCAAGCAATAG...........ACCCGGGTTCGACTCCCGGCAAACGCA scaffold_22.trna22-GlyTCC Sc: 74.33  
GCGTTTGTAGTCCAACGGTtA.GGATAATTGCCTTCCAAGCAATAG...........ACCCGGGTTCGACTCCCGGCAAACGCA scaffold_155.trna2-GlyTCC Sc: 74.33  
GCGTTTGTAGTCCAACGGTtA.GGATAATTGCCTTCCAAGCAATAG...........ACCCGGGTTCGACTCCCGGCAAACGCA scaffold_155.trna1-GlyTCC Sc: 74.33  
GCGTTTGTAGTCCAACGGTtA.GGATAATTGCCTTCCAAGCAATAG...........ACCCGGGTTCGACTCCCGGCAAACGCA scaffold_149.trna2-GlyTCC Sc: 74.33  
GCGTTTGTAGTCCAACGGTtA.GGATAATTGCCTTCCAAGCAATAG...........ACCCGGGTTCGACTCCCGGCAAACGCA scaffold_138.trna2-GlyTCC Sc: 74.33  
GCGTTTGTAGTCCAACGGTtA.GGATAATTGCCTTCCAAGCAATAG...........ACCCGGGTTCGACTCCCGGCAAACGCA scaffold_134.trna2-GlyTCC Sc: 74.33  
GCGTTTGTAGTCCAACGGTtA.GGATAATTGCCTTCCAAGCAATAG...........ACCCGGGTTCGACTCCCGGCAAACGCA scaffold_1.trna10-GlyTCC Sc: 74.33  



His tRNAs



>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<.<.................>>>>>.......<<<<<.<<<<<<<.
GTGGCTGTAGTTTAGTGGTg.A.GAATTCCACGTTGTGGCCGTG.GAG.............ACCTGGGCTCGAATCCCAG.CAGCCACA scaffold_76.trna11-HisGTG Sc: 63.70  
GTGGCTGTAGTTTAGTGGTg.A.GAATTCCACGTTGTGGCCGTG.GAG.............ACCTGGGCTCGAATCCCAG.CAGCCACA scaffold_48.trna1-HisGTG Sc: 63.70  
GTGGCTGTAGTTTAGTGGTg.A.GAATTCCACGTTGTGGCCGTG.GAG.............ACCTGGGCTCGAATCCCAG.CAGCCACA scaffold_41.trna8-HisGTG Sc: 63.70  
GTGGCTGTAGTTTAGTGGTg.A.GAATTCCACGTTGTGGCCGTG.GAG.............ACCTGGGCTCGAATCCCAG.CAGCCACA scaffold_197.trna1-HisGTG Sc: 63.70  
GTGGCTGTAGTTTAGTGGTa.A.GAATTCCACGTTGTGGCCGTG.GAG.............ACCTGGGCTCGAATCCCAG.CAGCCACA scaffold_96.trna2-HisGTG Sc: 62.38  
GTGGCTGTAGTTTAGTGGTa.A.GAATTCCACGTTGTGGCCGTG.GAG.............ACCTGGGCTCGAATCCCAG.CAGCCACA scaffold_78.trna10-HisGTG Sc: 62.38  
GTGGCTGTAGTTTAGTGGTa.A.GAATTCCACGTTGTGGCCGTG.GAG.............ACCTGGGCTCGAATCCCAG.CAGCCACA scaffold_68.trna5-HisGTG Sc: 62.38  
GTGGCTGTAGTTTAGTGGTa.A.GAATTCCACGTTGTGGCCGTG.GAG.............ACCTGGGCTCGAATCCCAG.CAGCCACA scaffold_65.trna4-HisGTG Sc: 62.38  
GTGGCTGTAGTTTAGTGGTa.A.GAATTCCACGTTGTGGCCGTG.GAG.............ACCTGGGCTCGAATCCCAG.CAGCCACA scaffold_30.trna10-HisGTG Sc: 62.38  
GTGGCTGTAGTTTAGTGGTa.A.GAATTCCACGTTGTGGCCGTG.GAG.............ACCTGGGCTCGAATCCCAG.CAGCCACA scaffold_279.trna1-HisGTG Sc: 62.38  
GTGGCTGTAGTTTAGTGGTa.A.GAATTCCACGTTGTGGCCGTG.GAG.............ACCTGGGCTCGAATCCCAG.CAGCCACA scaffold_25.trna19-HisGTG Sc: 62.38  
GTGGCTGTAGTTTAGTGGTa.A.GAATTCCACGTTGTGGCCGTG.GAG.............ACCTGGGCTCGAATCCCAG.CAGCCACA scaffold_22.trna13-HisGTG Sc: 62.38  
GTGGCTGTAGTTTAGTGGTa.A.GAATTCCACGTTGTGGCCGTG.GAG.............ACCTGGGCTCGAATCCCAG.CAGCCACA scaffold_214.trna1-HisGTG Sc: 62.38  
GTGGCTGTAGTTTAGTGGTa.A.GAATTCCACGTTGTGGCCGTG.GAG.............ACCTGGGCTCGAATCCCAG.CAGCCACA scaffold_154.trna1-HisGTG Sc: 62.38  
GTGGCTGTAGTTTAGTGGTa.A.GAATTCCACGTTGTGGCCGTG.GAG.............ACCTGGGCTCGAATCCCAG.CAGCCACA scaffold_148.trna3-HisGTG Sc: 62.38  
GTGGCTGTAGTTTAGTGGTa.A.GAATTCCACGTTGTGGCCGTG.GAG.............ACCTGGGCTCGAATCCCAG.CAGCCACA scaffold_120.trna1-HisGTG Sc: 62.38  
GTGGCTGTAGTTTAGTGGTa.A.GAATTCCACGTTGTGGCCGTG.GAG.............ACCTGGGCTCGAATCCCAG.CAGCCACA scaffold_111.trna9-HisGTG Sc: 62.38  
>>>>>>>..>>>............<<<.>>>>>.......<<<<.<.................>>>>>.......<<<<<.<<<<<<<.
GCGGATGTAGCCAAGTGGAtcA.AGGCAGTGGATTGTGAATCCA.CC.AT...........GCGCGGGTTCAATTCCCGT.CGTTCGCC scaffold_756.trna1-HisGTG Sc: 52.58  
GCGGATGTAGCCAAGTGGAtcA.AGGCAGTGGATTGTGAATCCA.CC.AT...........GCGCGGGTTCAATTCCCGT.CGTTCGCC scaffold_714.trna1-HisGTG Sc: 52.58  
GCGGATGTAGCCAAGTGGAtcA.AGGCAGTGGATTGTGAATCCA.CC.AT...........GCGCGGGTTCAATTCCCGT.CGTTCGCC scaffold_699.trna1-HisGTG Sc: 52.58  
GCGGATGTAGCCAAGTGGAtcA.AGGCAGTGGATTGTGAATCCA.CC.AT...........GCGCGGGTTCAATTCCCGT.CGTTCGCC scaffold_262.trna52-HisGTG Sc: 52.58  
GCGGATGTAGCCAAGTGGAtcA.AGGCAGTGGATTGTGAATCCA.CC.AT...........GCGCGGGTTCAATTCCCGT.CGTTCGCC scaffold_1815.trna2-HisGTG Sc: 52.58  
GCGGATGTAGCCAAGTGGAtcA.AGGCAGTGGATTGTGAATCCA.CC.AT...........GCGCGGGTTCAATTCCCGT.CGTTCGCC scaffold_1704.trna1-HisGTG Sc: 52.58  
GCGGATGTAGCCAAGTGGAtcA.AGGCAGTGGATTGTGAATCCA.CC.AC...........GCGCGGGTTCAATCCCCGT.CGTTCGCC scaffold_1175.trna1-HisGTG Sc: 50.71  
GTGGATGTAGCCAAGTGGAtcA.AGGCAGTGGATTGTGAATCCAgCAT.............GCGCGGGTTCAATTCCCGT.CGTTCGCC scaffold_7.trna8-HisGTG Sc: 44.23  



Ile tRNAs


>>>>>>>..>>>>.........<<.<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GGCCTATTAGCTCAGTTGGTtAGA.GCGTCGTGCTAATAACGCGAAG...........GtCGCAGGTTCGAGACCTGCATAGGCCA scaffold_2.trna3-IleAAT Sc: 83.42  
GGCCCATTAGCTCAGTTGGTtAGA.GCGTGGTGCTAATAACGCCAAG...........GtCGCAGGTTCGAGACCTGCATGGGCCA scaffold_22.trna24-IleAAT Sc: 83.36  
GGCCTATTAGCTCAGTTGGTtAGA.GCGTCGTGCTAATAACGCGAAG...........GtCGCAGGTTCGAGACCTGCATGGGCCA scaffold_85.trna1-IleAAT Sc: 82.24  
GGCCTATTAGCTCAGTTGGTtAGA.GCGTCGTGCTAATAACGCGAAG...........GtCGCAGGTTCGAGACCTGCATGGGCCA scaffold_7.trna10-IleAAT Sc: 82.24  
GGCCTATTAGCTCAGTTGGTtAGA.GCGTCGTGCTAATAACGCGAAG...........GtCGCAGGTTCGAGACCTGCATGGGCCA scaffold_41.trna1-IleAAT Sc: 82.24  
GGCCTATTAGCTCAGTTGGTtAGA.GCGTCGTGCTAATAACGCGAAG...........GtCGCAGGTTCGAGACCTGCATGGGCCA scaffold_40.trna3-IleAAT Sc: 82.24  
GGCCTATTAGCTCAGTTGGTtAGA.GCGTCGTGCTAATAACGCGAAG...........GtCGCAGGTTCGAGACCTGCATGGGCCA scaffold_25.trna9-IleAAT Sc: 82.24  
GGCCTATTAGCTCAGTTGGTtAGA.GCGTCGTGCTAATAACGCGAAG...........GtCGCAGGTTCGAGACCTGCATGGGCCA scaffold_170.trna6-IleAAT Sc: 82.24  
GGCCTATTAGCTCAGTTGGTtAGA.GCGTCGTGCTAATAACGCGAAG...........GtCGCAGGTTCGAGACCTGCATGGGCCA scaffold_146.trna3-IleAAT Sc: 82.24  
GGCCTATTAGCTCAGTTGGTtAGA.GCGTCGTGCTAATAACGCGAAG...........GtCGCAGGTTCGAGACCTGCATGGGCCA scaffold_143.trna1-IleAAT Sc: 82.24  
GGCCTATTAGCTCAGTTGGTtAGA.GCGTCGTGCTAATAACGCGAAG...........GtCGCAGGTTCGAGACCTGCATGGGCCA scaffold_142.trna1-IleAAT Sc: 82.24  
GGCCTATTAGCTCAGTTGGTtAGA.GCGTCGTGCTAATAACGCGAAG...........GtCGCAGGTTCGAGACCTGCATGGGCCA scaffold_125.trna2-IleAAT Sc: 82.24  
GGCCTATTAGCTCAGTTGGTtAGA.GCGTCGTGCTAATAACGCGAAG...........GtCGCAGGTTCGAGACCTGCATGGGCCA scaffold_112.trna8-IleAAT Sc: 82.24  
GGCCTATTAGCTCAGTTGGTtAGA.GCGTCGTGCTAATAACGCGAAG...........GtCGCAGGTTCGAGACCTGCATGGGCCA scaffold_101.trna2-IleAAT Sc: 82.24  
GGCCTATTAGCTCAGTTGGTtAGA.GCGTGGTGCTAATAACGCCAAG...........GtCGCAGGTTCGAGACCTGCATGGGCCA scaffold_3.trna22-IleAAT Sc: 80.73  
GGCCTATTAGCTCAGCTGGTtAGA.GCGTCGTGCTAATAACGCGAAG...........GtCGCAGGTTCGAGACCTGCATGGGCCA scaffold_47.trna3-IleAAT Sc: 79.79  
GGCCTATTAGCTCAGCTGGTtAGA.GCGTCGTGCTAATAACGCGAAG...........GtCGCAGGTTCGAGACCTGCATGGGCCA scaffold_30.trna17-IleAAT Sc: 79.79  
GGCCTATTAGCTCAGCTGGTtAGA.GTGTCGTGCTAATAACGCGAAG...........GtCGCAGGTTCGAGACCTGCATGGGCCA scaffold_134.trna4-IleAAT Sc: 78.32  
GGCCTATTAGCTCAGTTGGTtAGA.GCGTCGTGCTAATAACGCGAAG...........GtCGCAGGTTTGAGACCTGCATGGGCCA scaffold_104.trna5-IleAAT Sc: 75.33  
>.>>>>>..>>>>.........<<.<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<.<.
GACCTATTAGCTCAGTTGGTtAGA.GCGTCGTGCTAATAACGCGAAG...........AtCGCAGGTTCGAGACCTGCATGGGCCA scaffold_47.trna4-IleAAT Sc: 74.45  
>>>>>>>..>>>>.........<<.<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GGCCTATTAGCTCAGCTAGTtAGA.GCGTCGTGCTAATAACGCGAAG...........GtCGCAGGTTCGAGACCTGCATGGGCCA scaffold_35.trna3-IleAAT Sc: 71.86  
GGCCTATTAGTTCAGTTGGTtAGA.GCGTCGTGCTAATAACGCGAAA...........GtTGCAGGTTCGAGACCTGCATGGGCCA scaffold_88.trna11-IleAAT Sc: 70.65  
GGCCTATTAGCTCAGTTGATtAGA.GCGTCGTGCTAATAATGTGAAG...........GtTGTAGGTTTGAAACCTGCATAGGCCA scaffold_63.trna15-IleAAT Sc: 52.11  
>>>>>>>..>>>>.........<<.<<.>>>>>.......<<<<<................>>>.>.......<.<<<<<<<<<<.
GGTCTATTAGCTCAGTTGGTtAGA.GTGTTGTGCTAATAATACGAAA...........TtCACAGGTTCAAGTCATGTATAGGCCA scaffold_56.trna1-IleAAT Sc: 50.52  
>>.>>>>..>>>>.........<<.<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<.<<.
GGTCTATTAGTTCAATTGGTtAGA.GCATTATGCTAATAATATAAAA...........GtCATAAGTTTGAATCTTATATGGTCCA scaffold_111.trna1-IleAAT Sc: 46.24  
>>>>>>...>>>>.........<<.<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<.
GGTCTATTAGTTCAGTTGATtAGA.ATATCATACTAATAATGTGAAA...........AtCATAGGTTCAATTCTTGTTTGGGCCA scaffold_126.trna1-IleAAT Sc: 45.06  
>>>>>>>..>>>...........<.<<.>>>>>.......<<<<<.................>>>>.......<<<<.<<<<<<<.
GGTTTATTAGCTCAGTTGGTtATA.GCATCGTGTTAATAACACGAAA...........TtCATAGGTTCGATTCTTGCATGAGTCA scaffold_77.trna7-IleAAT Sc: 43.25  
>>>>>>>..>>>>.........<<.<<.>>>.>.......<.<<<................>>>>>.......<<<<<<<<<<<<.
GATCTATTAGCTTAGTTGGTtAGA.GTGTCGTGTTAATAATTTGAAT...........GtCATAGGTTTGAATCCTATATGGGTTA scaffold_81.trna5-IleAAT Sc: 42.14  
>>>>>>...>>>>.........<<.<<.>>>.>.......<.<<<................>>>>>.......<<<<<.<<<<<<.
GATTCATTAGCTTAATTGGTtAGA.GCATTATGTTAATAACCTGAAA...........GtTATAAGTTTGATTCTTGTTTGAGTCA scaffold_199.trna2-IleAAT Sc: 40.03  
GACTCATTAGTTTAATTGGTtAGA.ACATTATGCTAATAATCTGAAA...........GtTATAAGTTTGAGCCTTGTTTGGGTCA scaffold_15.trna10-IleAAT Sc: 37.00  
>>>>>>>..>>>>.........<<.<<.>>>>>.......<<<<<................>>>.>.......<.<<<<<<<<<<.
GACTTATTAGCTCAATTGGTtAGAaGCATTGTGCTAATAATGTGAAA...........GtCACATGTTCAATTTCTGTATGGGTCA scaffold_49.trna3-IleAAT Sc: 33.74  


>>>>>>>..>>>>.........<<.<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GGTCCCGTAGCTCAGTTGGTtAGA.GCGTTGGTCTTATGAGCCGAAG...........GtCGCGGGTTCGAGCCCCGCCGGGACCA scaffold_41.trna4-IleTAT Sc: 85.40  
GGTCCCGTAGCTCAGTTGGTtAGA.GCGTTGGTCTTATGAGCCGAAG...........GtCGCGGGTTCGAGCCCCGCCGGGACCA scaffold_148.trna2-IleTAT Sc: 85.40  
GGTCCCGTAGCTCAGTTGGTtAGA.GCGTTGGTCTTATGAGCCGAAG...........GtCGCGGGTTCGAGCCCCGCCGGGACCA scaffold_13.trna3-IleTAT Sc: 85.40  
GGTCCCGTAGCTCAGTTGGTtAGA.GCGTTGGTCTTATGAGCCGAAG...........GtCGCGGGTTCGAGCCCCGCCGGGACCA scaffold_111.trna8-IleTAT Sc: 85.40  
GGTCCCGTAGCTCAGTTGGTtAGA.GCGTTGGTCTTATGAGCCGAAG...........GtCGCGGGTTCGAGCCCCGCCGGGACCA scaffold_1.trna2-IleTAT Sc: 85.40  
GGTCCCGTAGCTCAGTTGGTtAGA.GCGCTGGTCTTATGAGCCGGAG...........GtCGCGAGTTCGAGCCTCGCCGGGACCA scaffold_70.trna11-IleTAT Sc: 82.72  
GGTCCCGTAGCTCAGTTGGTtAGA.GCGCTGGTCTTATGAGCCGGAG...........GtCGCGAGTTCGAGCCTCGCCGGGACCA scaffold_30.trna16-IleTAT Sc: 82.72  
GGTCCCGTAGCTCAGTTGGTcAGA.GCGTTGGTCTTATGAGCCGAAA...........GtCGCGGGTTCGAGCCCCGCCGGGACCA scaffold_53.trna6-IleTAT Sc: 79.69  



Leu tRNAs


>>>>>>>..>>>..............<<<.>>>>>.......<<<<<.>>................<<..>>>>>.......<<<<<.<<<<<<<.
GTTGAGATGGCCGAGTTGGTctA..AGGCGCCAGATTAAGGTTCTGGTCCGA............AAGGGCGTGGGTTCAAATCCCAC.TCTCAACA scaffold_9.trna8-LeuAAG Sc: 69.68  
GTTGAGATGGCCGAGTTGGTctA..AGGCGCCAGATTAAGGTTCTGGTCCGA............AAGGGCGTGGGTTCAAATCCCAC.TCTCAACA scaffold_82.trna12-LeuAAG Sc: 69.68  
GTTGAGATGGCCGAGTTGGTctA..AGGCGCCAGATTAAGGTTCTGGTCCGA............AAGGGCGTGGGTTCAAATCCCAC.TCTCAACA scaffold_78.trna12-LeuAAG Sc: 69.68  
GTTGAGATGGCCGAGTTGGTctA..AGGCGCCAGATTAAGGTTCTGGTCCGA............AAGGGCGTGGGTTCAAATCCCAC.TCTCAACA scaffold_65.trna1-LeuAAG Sc: 69.68  
GTTGAGATGGCCGAGTTGGTctA..AGGCGCCAGATTAAGGTTCTGGTCCGA............AAGGGCGTGGGTTCAAATCCCAC.TCTCAACA scaffold_64.trna2-LeuAAG Sc: 69.68  
GTTGAGATGGCCGAGTTGGTctA..AGGCGCCAGATTAAGGTTCTGGTCCGA............AAGGGCGTGGGTTCAAATCCCAC.TCTCAACA scaffold_43.trna5-LeuAAG Sc: 69.68  
GTTGAGATGGCCGAGTTGGTctA..AGGCGCCAGATTAAGGTTCTGGTCCGA............AAGGGCGTGGGTTCAAATCCCAC.TCTCAACA scaffold_43.trna4-LeuAAG Sc: 69.68  
GTTGAGATGGCCGAGTTGGTctA..AGGCGCCAGATTAAGGTTCTGGTCCGA............AAGGGCGTGGGTTCAAATCCCAC.TCTCAACA scaffold_35.trna10-LeuAAG Sc: 69.68  
GTTGAGATGGCCGAGTTGGTctA..AGGCGCCAGATTAAGGTTCTGGTCCGA............AAGGGCGTGGGTTCAAATCCCAC.TCTCAACA scaffold_257.trna1-LeuAAG Sc: 69.68  
GTTGAGATGGCCGAGTTGGTctA..AGGCGCCAGATTAAGGTTCTGGTCCGA............AAGGGCGTGGGTTCAAATCCCAC.TCTCAACA scaffold_220.trna2-LeuAAG Sc: 69.68  
GTTGAGATGGCCGAGTTGGTctA..AGGCGCCAGATTAAGGTTCTGGTCCGA............AAGGGCGTGGGTTCAAATCCCAC.TCTCAACA scaffold_22.trna2-LeuAAG Sc: 69.68  
GTTGAGATGGCCGAGTTGGTctA..AGGCGCCAGATTAAGGTTCTGGTCCGA............AAGGGCGTGGGTTCAAATCCCAC.TCTCAACA scaffold_171.trna1-LeuAAG Sc: 69.68  
GTTGAGATGGCCGAGTTGGTctA..AGGCGCCAGATTAAGGTTCTGGTCCGA............AAGGGCGTGGGTTCAAATCCCAC.TCTCAACA scaffold_162.trna2-LeuAAG Sc: 69.68  
GTTGAGATGGCCGAGTTGGTctA..AGGCGCCAGATTAAGGTTCTGGTCCGA............AAGGGCGTGGGTTCAAATCCCAC.TCTCAACA scaffold_139.trna5-LeuAAG Sc: 69.68  
GTTGAGATGGCCGAGTTGGTctA..AGGCGCCAGATTAAGGTTCTGGTCCGA............AAGGGCGTGGGTTCAAATCCCAC.TCTCAACA scaffold_121.trna11-LeuAAG Sc: 69.68  
GTTGAGATGGCCGAGTTGGTctA..AGGCGCCAGATTAAGGTTCTGGTCCGA............AAGGGCGTGGGTTCAAATCCCAC.TCTCAACA scaffold_118.trna4-LeuAAG Sc: 69.68  


>>>>>>>..>>>..............<<<.>>>>>.......<<<<<.>>................<<..>>>>>.......<<<<<.<<<<<<<.
GTCAAGATGGCCGAGTTGGTctA..AGGCGCCAGTTTCAGGTACTGGTCCGA............AAGGGCATGGGTTCGAATCCCAT.TCTTGACA scaffold_75.trna6-LeuCAG Sc: 68.57  
GTCAAGATGGCCGAGTTGGTctA..AGGCGCCAGTTTCAGGTACTGGTCCGA............AAGGGCATGGGTTCGAATCCCAT.TCTTGACA scaffold_22.trna20-LeuCAG Sc: 68.57  
GTCAAGATGGCCGAGTTGGTctA..AGGCGCCAGTTTCAGGTACTGGTCCGA............AAGGGCATGGGTTCGAATCCCAT.TCTTGACA scaffold_21.trna13-LeuCAG Sc: 68.57  
GTCAAGATGGCCGAGTTGGTctA..AGGCGCCAGTTTCAGGTACTGGTCCGA............AAGGGCATGGGTTCGAATCCCAT.TCTTGACA scaffold_21.trna12-LeuCAG Sc: 68.57  
GTCAAGATGGCCGAGTTGGTctA..AGGCGCCAGTTTCAGGTACTGGTCCGA............AAGGGCATGGGTTCGAATCCCAT.TCTTGACA scaffold_189.trna1-LeuCAG Sc: 68.57  
GTCAAGATGGCCGAGTTGGTctA..AGGCGCCAGTTTCAGGTACTGGTCCGA............AAGGGCATGGGTTCGAATCCCAT.TCTTGACA scaffold_185.trna1-LeuCAG Sc: 68.57  
GTCAAGATGGCCGAGTTGGTctA..AGGCGCCAGTTTCAGGTACTGGTCCGA............AAGGGCATGGGTTCGAATCCCAT.TCTTGACA scaffold_18.trna2-LeuCAG Sc: 68.57  

>>>>>>>..>>>..............<<<.>>>>>.......<<<<<.>>................<<..>>>>>.......<<<<<.<<<<<<<.
GACAGTTTGGCCGAGT.GGTctA..AGGCGCCAGATTTAGGCTCTGGTCCGA............AAGGGCGTGGGTTCAAATCCCAC.AGCTGTCA scaffold_96.trna3-LeuTAG Sc: 68.72  
GACAGTTTGGCCGAGT.GGTctA..AGGCGCCAGATTTAGGCTCTGGTCCGA............AAGGGCGTGGGTTCAAATCCCAC.AGCTGTCA scaffold_65.trna6-LeuTAG Sc: 68.72  
GACAGTTTGGCCGAGT.GGTctA..AGGCGCCAGATTTAGGCTCTGGTCCGA............AAGGGCGTGGGTTCAAATCCCAC.AGCTGTCA scaffold_63.trna3-LeuTAG Sc: 68.72  
GACAGTTTGGCCGAGT.GGTctA..AGGCGCCAGATTTAGGCTCTGGTCCGA............AAGGGCGTGGGTTCAAATCCCAC.AGCTGTCA scaffold_52.trna4-LeuTAG Sc: 68.72  
GACAGTTTGGCCGAGT.GGTctA..AGGCGCCAGATTTAGGCTCTGGTCCGA............AAGGGCGTGGGTTCAAATCCCAC.AGCTGTCA scaffold_35.trna9-LeuTAG Sc: 68.72  
GACAGTTTGGCCGAGT.GGTctA..AGGCGCCAGATTTAGGCTCTGGTCCGA............AAGGGCGTGGGTTCAAATCCCAC.AGCTGTCA scaffold_26.trna23-LeuTAG Sc: 68.72  
GACAGTTTGGCCGAGT.GGTctA..AGGCGCCAGATTTAGGCTCTGGTCCGA............AAGGGCGTGGGTTCAAATCCCAC.AGCTGTCA scaffold_183.trna2-LeuTAG Sc: 68.72  
GACAGTTTGGCCGAGT.GGTctA..AGGCGCCAGATTTAGGCTCTGGTCCGA............AAGGGCGTGGGTTCAAATCCCAC.AGCTGTCA scaffold_15.trna1-LeuTAG Sc: 68.72  
GACAGTTTGGCCGAGT.GGTctA..AGGCGTCAGATTTAGGCTCTGGTCCGA............AAGGGCGTGGGTTCAAATCCCAC.AGCTGTCA scaffold_22.trna1-LeuTAG Sc: 65.37  
>>>>>>>..>>>..............<<<..>>>>.......<<<<..>>................<<..>>>>>.......<<<<<.<<<<<<<.
GACAGTTTGGCCGAGT.GGTctA..AGGCGCCAGATTTAGGCTTTGATCCGA............AAGGGCGTGGGTTCAAATCCCAC.AGCTGTCA scaffold_41.trna20-LeuTAG Sc: 57.46  
>>>>>>>..>>>..............<<<.>>>>>.......<<<<<.>>>..............<<<..>>>>>.......<<<<<.<<<<<<<.
GCCGCTATGGTGAAATTGGT..Ag.ACACGCTGCTCTTAGGAAGCAGTGCTA............GAGCATCTCGGTTCGAGTCCGAG.TAGCGGCA scaffold_262.trna55-LeuTAG Sc: 55.01  
GCCGCTATGGTGAAATTGGT..Ag.ACACGCTGCTCTTAGGAAGCAGTGCTA............GAGCATCTCGGTTCGAGTCCGAG.TAGCGGCA scaffold_262.trna28-LeuTAG Sc: 55.01  

>>>>>>>..>>>..............<<<.>>>>>.......<<<<<.>>>>............<<<<..>>>>>.......<<<<<.<<<<<<<.
GTCAGGATGGCCGAGT.GGTctA..AGGCGCCAGACTCAAGTTCTGGTCTTC..GTGA......GAAGGCGTGGGTTCAAATCCCAC.TTCTGACA scaffold_3.trna7-LeuCAA Sc: 73.57  
GTCAGGATGGCCGAGT.GGTctA..AGGCGCCAGACTCAAGTTCTGGTCTTC..GTGA......GAAGGCGTGGGTTCAAATCCCAC.TTCTGACA scaffold_3.trna17-LeuCAA Sc: 73.57  
GTCAGGATGGCCGAGT.GGTctA..AGGCGCCAGACTCAAGTTCTGGTCTTC..GTGA......GAAGGCGTGGGTTCAAATCCCAC.TTCTGACA scaffold_22.trna11-LeuCAA Sc: 73.57  
GTCAGGATGGCCGAGT.GGTctA..AGGCGCCAGACTCAAGTTCTGGTCCTC..GTGA......GAGGGCGTGGGTTCAAATCCCAC.TTCTGACA scaffold_98.trna2-LeuCAA Sc: 73.19  
GTCAGGATGGCCGAGT.GGTctA..AGGCGCCAGACTCAAGTTCTGGTCCTC..GTGA......GAGGGCGTGGGTTCAAATCCCAC.TTCTGACA scaffold_90.trna4-LeuCAA Sc: 73.19  
GTCAGGATGGCCGAGT.GGTctA..AGGCGCCAGACTCAAGTTCTGGTCCTC..GTGA......GAGGGCGTGGGTTCAAATCCCAC.TTCTGACA scaffold_53.trna9-LeuCAA Sc: 73.19  
GTCAGGATGGCCGAGT.GGTctA..AGGCGCCAGACTCAAGTTCTGGTCCTC..GTGA......GAGGGCGTGGGTTCAAATCCCAC.TTCTGACA scaffold_4.trna10-LeuCAA Sc: 73.19  
GTCAGGATGGCCGAGT.GGTctA..AGGCGCCAGACTCAAGTTCTGGTCCTC..GTGA......GAGGGCGTGGGTTCAAATCCCAC.TTCTGACA scaffold_26.trna21-LeuCAA Sc: 73.19  
GTCAGGATGGCCGAGT.GGTctA..AGGCGCCAGACTCAAGTTCTGGTCCTC..GTGA......GAGGGCGTGGGTTCAAATCCCAC.TTCTGACA scaffold_258.trna1-LeuCAA Sc: 73.19  
GTCAGGATGGCCGAGT.GGTctA..AGGCGCCAGACTCAAGTTCTGGTCCTC..GTGA......GAGGGCGTGGGTTCAAATCCCAC.TTCTGACA scaffold_246.trna3-LeuCAA Sc: 73.19  
GTCAGGATGGCCGAGT.GGTctA..AGGCGCCAGACTCAAGTTCTGGTCCTC..GTGA......GAGGGCGTGGGTTCAAATCCCAC.TTCTGACA scaffold_246.trna2-LeuCAA Sc: 73.19  
GTCAGGATGGCCGAGT.GGTctA..AGGCGCCAGACTCAAGTTCTGGTCTTC..GTGA......GAGGGCGTGGGTTCAAATCCCAC.TTCTGACA scaffold_40.trna1-LeuCAA Sc: 71.45  
GTCAGGATGGCCGAGT.GGTctA..AGGCGCCAGACTCAAGTTCTGGTCTTC..GTGA......GAGGGCGTGGGTTCAAATCCCAC.TTCTGACA scaffold_153.trna2-LeuCAA Sc: 71.45  
GTCAGGATGGCCGAGT.GGTctA..AGGCGTCAGACTCAAGTTCTGGTCCTC..GTGA......GAGGGCGTGGGTTCAAATCCCAC.TTCTGACA scaffold_25.trna13-LeuCAA Sc: 69.84  
>>>>>>>..>>>..............<<<.>>>>>.......<<<<<.>>>..............<<<..>>>>>.......<<<<<.<<<<<<<.
GCCTTGGTGGTGAAAT.GGT..Ag.ACACGCGAGACTCAAAATCTCGTGCTAA..........AGAGCGTGGAGGTTCGAGTCCTCT.TCAAGGCA scaffold_866.trna1-LeuCAA Sc: 52.25  
GCCTTGGTGGTGAAAT.GGT..Ag.ACACGCGAGACTCAAAATCTCGTGCTAA..........AGAGCGTGGAGGTTCGAGTCCTCT.TCAAGGCA scaffold_854.trna1-LeuCAA Sc: 52.25  
GCCTTGGTGGTGAAAT.GGT..Ag.ACACGCGAGACTCAAAATCTCGTGCTAA..........AGAGCGTGGAGGTTCGAGTCCTCT.TCAAGGCA scaffold_760.trna1-LeuCAA Sc: 52.25  
GCCTTGGTGGTGAAAT.GGT..Ag.ACACGCGAGACTCAAAATCTCGTGCTAA..........AGAGCGTGGAGGTTCGAGTCCTCT.TCAAGGCA scaffold_756.trna2-LeuCAA Sc: 52.25  
GCCTTGGTGGTGAAAT.GGT..Ag.ACACGCGAGACTCAAAATCTCGTGCTAA..........AGAGCGTGGAGGTTCGAGTCCTCT.TCAAGGCA scaffold_740.trna1-LeuCAA Sc: 52.25  
GCCTTGGTGGTGAAAT.GGT..Ag.ACACGCGAGACTCAAAATCTCGTGCTAA..........AGAGCGTGGAGGTTCGAGTCCTCT.TCAAGGCA scaffold_735.trna1-LeuCAA Sc: 52.25  
GCCTTGGTGGTGAAAT.GGT..Ag.ACACGCGAGACTCAAAATCTCGTGCTAA..........AGAGCGTGGAGGTTCGAGTCCTCT.TCAAGGCA scaffold_730.trna1-LeuCAA Sc: 52.25  
GCCTTGGTGGTGAAAT.GGT..Ag.ACACGCGAGACTCAAAATCTCGTGCTAA..........AGAGCGTGGAGGTTCGAGTCCTCT.TCAAGGCA scaffold_715.trna1-LeuCAA Sc: 52.25  
GCCTTGGTGGTGAAAT.GGT..Ag.ACACGCGAGACTCAAAATCTCGTGCTAA..........AGAGCGTGGAGGTTCGAGTCCTCT.TCAAGGCA scaffold_714.trna2-LeuCAA Sc: 52.25  
GCCTTGGTGGTGAAAT.GGT..Ag.ACACGCGAGACTCAAAATCTCGTGCTAA..........AGAGCGTGGAGGTTCGAGTCCTCT.TCAAGGCA scaffold_707.trna1-LeuCAA Sc: 52.25  
GCCTTGGTGGTGAAAT.GGT..Ag.ACACGCGAGACTCAAAATCTCGTGCTAA..........AGAGCGTGGAGGTTCGAGTCCTCT.TCAAGGCA scaffold_699.trna2-LeuCAA Sc: 52.25  
GCCTTGGTGGTGAAAT.GGT..Ag.ACACGCGAGACTCAAAATCTCGTGCTAA..........AGAGCGTGGAGGTTCGAGTCCTCT.TCAAGGCA scaffold_617.trna1-LeuCAA Sc: 52.25  
GCCTTGGTGGTGAAAT.GGT..Ag.ACACGCGAGACTCAAAATCTCGTGCTAA..........AGAGCGTGGAGGTTCGAGTCCTCT.TCAAGGCA scaffold_2676.trna1-LeuCAA Sc: 52.25  
GCCTTGGTGGTGAAAT.GGT..Ag.ACACGCGAGACTCAAAATCTCGTGCTAA..........AGAGCGTGGAGGTTCGAGTCCTCT.TCAAGGCA scaffold_2663.trna1-LeuCAA Sc: 52.25  
GCCTTGGTGGTGAAAT.GGT..Ag.ACACGCGAGACTCAAAATCTCGTGCTAA..........AGAGCGTGGAGGTTCGAGTCCTCT.TCAAGGCA scaffold_262.trna57-LeuCAA Sc: 52.25  
GCCTTGGTGGTGAAAT.GGT..Ag.ACACGCGAGACTCAAAATCTCGTGCTAA..........AGAGCGTGGAGGTTCGAGTCCTCT.TCAAGGCA scaffold_262.trna42-LeuCAA Sc: 52.25  
GCCTTGGTGGTGAAAT.GGT..Ag.ACACGCGAGACTCAAAATCTCGTGCTAA..........AGAGCGTGGAGGTTCGAGTCCTCT.TCAAGGCA scaffold_262.trna36-LeuCAA Sc: 52.25  
GCCTTGGTGGTGAAAT.GGT..Ag.ACACGCGAGACTCAAAATCTCGTGCTAA..........AGAGCGTGGAGGTTCGAGTCCTCT.TCAAGGCA scaffold_262.trna33-LeuCAA Sc: 52.25  
GCCTTGGTGGTGAAAT.GGT..Ag.ACACGCGAGACTCAAAATCTCGTGCTAA..........AGAGCGTGGAGGTTCGAGTCCTCT.TCAAGGCA scaffold_262.trna30-LeuCAA Sc: 52.25  
GCCTTGGTGGTGAAAT.GGT..Ag.ACACGCGAGACTCAAAATCTCGTGCTAA..........AGAGCGTGGAGGTTCGAGTCCTCT.TCAAGGCA scaffold_262.trna3-LeuCAA Sc: 52.25  
GCCTTGGTGGTGAAAT.GGT..Ag.ACACGCGAGACTCAAAATCTCGTGCTAA..........AGAGCGTGGAGGTTCGAGTCCTCT.TCAAGGCA scaffold_262.trna17-LeuCAA Sc: 52.25  
GCCTTGGTGGTGAAAT.GGT..Ag.ACACGCGAGACTCAAAATCTCGTGCTAA..........AGAGCGTGGAGGTTCGAGTCCTCT.TCAAGGCA scaffold_2010.trna1-LeuCAA Sc: 52.25  
GCCTTGGTGGTGAAAT.GGT..Ag.ACACGCGAGACTCAAAATCTCGTGCTAA..........AGAGCGTGGAGGTTCGAGTCCTCT.TCAAGGCA scaffold_1904.trna1-LeuCAA Sc: 52.25  
GCCTTGGTGGTGAAAT.GGT..Ag.ACACGCGAGACTCAAAATCTCGTGCTAA..........AGAGCGTGGAGGTTCGAGTCCTCT.TCAAGGCA scaffold_1758.trna1-LeuCAA Sc: 52.25  
GCCTTGGTGGTGAAAT.GGT..Ag.ACACGCGAGACTCAAAATCTCGTGCTAA..........AGAGCGTGGAGGTTCGAGTCCTCT.TCAAGGCA scaffold_1641.trna1-LeuCAA Sc: 52.25  
GCCTTGGTGGTGAAAT.GGT..Ag.ACACGCGAGACTCAAAATCTCGTGCTAA..........AGAGCGTGGAGGTTCGAGTCCTCT.TCAAGGCA scaffold_1587.trna1-LeuCAA Sc: 52.25  
GCCTTGGTGGTGAAAT.GGT..Ag.ACACGCGAGACTCAAAATCTCGTGCTAA..........AGAGCGTGGAGGTTCGAGTCCTCT.TCAAGGCA scaffold_1523.trna1-LeuCAA Sc: 52.25  
GCCTTGGTGGTGAAAT.GGT..Ag.ACACGCGAGACTCAAAATCTCGTGCTAA..........AGAGCGTGGAGGTTCGAGTCCTCT.TCAAGGCA scaffold_1502.trna1-LeuCAA Sc: 52.25  
GCCTTGGTGGTGAAAT.GGT..Ag.ACACGCGAGACTCAAAATCTCGTGCTAA..........AGAGCGTGGAGGTTCGAGTCCTCT.TCAAGGCA scaffold_1437.trna1-LeuCAA Sc: 52.25  
GCCTTGGTGGTGAAAT.GGT..Ag.ACACGCGAGACTCAAAATCTCGTGCTAA..........AGAGCGTGGAGGTTCGAGTCCTCT.TCAAGGCA scaffold_1383.trna1-LeuCAA Sc: 52.25  
GCCTTGGTGGTGAAAT.GGT..Ag.ACACGCGAGACTCAAAATCTCGTGCTAA..........AGAGCGTGGAGGTTCGAGTCCTCT.TCAAGGCA scaffold_1360.trna1-LeuCAA Sc: 52.25  
GCCTTGGTGGTGAAAT.GGT..Ag.ACACGCGAGACTCAAAATCTCGTGCTAA..........AGAGCGTGGAGGTTCGAGTCCTCT.TCAAGGCA scaffold_1348.trna1-LeuCAA Sc: 52.25  
GCCTTGGTGGTGAAAT.GGT..Ag.ACACGCGAGACTCAAAATCTCGTGCTAA..........AGAGCGTGGAGGTTCGAGTCCTCT.TCAAGGCA scaffold_1307.trna1-LeuCAA Sc: 52.25  
GCCTTGGTGGTGAAAT.GGT..Ag.ACACGCGAGACTCAAAATCTCGTGCTAA..........AGAGCGTGGAGGTTCGAGTCCTCT.TCAAGGCA scaffold_1283.trna1-LeuCAA Sc: 52.25  
GCCTTGGTGGTGAAAT.GGT..Ag.ACACGCGAGACTCAAAATCTCGTGCTAA..........AGAGCGTGGAGGTTCGAGTCCTCT.TCAAGGCA scaffold_1232.trna1-LeuCAA Sc: 52.25  
GCCTTGGTGGTGAAAT.GGT..Ag.ACACGCGAGACTCAAAATCTCGTGCTAA..........AGAGCGTGGAGGTTCGAGTCCTCT.TCAAGGCA scaffold_1149.trna1-LeuCAA Sc: 52.25  
GCCTTGGTGGTGAAAT.GGT..Ag.ACACGCGAGACTCAAAATCTCGTGCTAA..........AGAGCGTGGAGGTTCGAGTCCTCT.TCAAGGCA scaffold_1060.trna1-LeuCAA Sc: 52.25  
GCCTTGGTGGTGAAAT.GGT..Ag.ACACACGAGACTCAAAATCTCGTGCTAA..........AGAGCGTGGAGGTTCGAGTCCTCT.TCAAGGCA scaffold_11.trna2-LeuCAA Sc: 50.53  
GCCTTGGTGGTGAAAT.AGT..Ag.ACACGCGAGACTCAAAATCTCGTGCTAA..........AGAGCGTGGAGGTTCGAGTCCTCT.TCAAGGCA scaffold_73.trna2-LeuCAA Sc: 44.33  
>>>>>>>..>>>..............<<<.>.>>>.......<<<.<.>>>..............<<<..>>>>>.......<<<<<.<<<<<<<.
GCCTTGGTGGTGAAAT.AGT..Ag.ACACGCAAGATTCAAAATCTCGTGCTAA..........AGAGCGTGGAGGTTCGAGTCCTCT.TCAAGGCA scaffold_13.trna8-LeuCAA Sc: 37.76  
>>>>>>>..>>>..............<<<.>>.>>.......<<.<<.>>>..............<<<..>.>>>.......<<<.<.<<<<<<<.
GTCTTGGTGGTGAAAT.GAT..Ag.ACATGCGAGACTCAAAATCCCGTGCTAG..........AGAGCGTGGAGGTTCAAGTCCTAT.TCAAGACA scaffold_15.trna19-LeuCAA Sc: 29.32  

>>>>>>>..>>>..............<<<.>>>>>.......<<<<<.>>>>............<<<<..>>>>>.......<<<<<.<<<<<<<.
GCTGGTTTGCCCGAGT.GGTt.A..AGGGGGAAGACTTAAGATCTTCTGCAC..ATAA......GTGCGCGTGGGTTCGAACCCCAC.AGCCAGCA scaffold_30.trna2-LeuTAA Sc: 71.47  
GCAGGTTTGCCCGAGT.GGTt.A..AGGGGGAAGACTTAAGATCTTCTGCAC..ATAA......GTGCGCGTGGGTTCGAACCCCAC.AGCCTGCA scaffold_261.trna1-LeuTAA Sc: 70.53  
GCAGGTTTGCCCGAGT.GGTt.A..AGGGGGAAGACTTAAGATCTTCTGCAC..ATAA......GTGCGCGTGGGTTCGAACCCCAC.AGCCTGCA scaffold_200.trna1-LeuTAA Sc: 70.53  
GCTGGTTTGCCCGAGA.GGTt.A..AGGGGGAAGACTTAAGATCTTCTGCAC..ATAA......GTGCGCGTGGGTTCGAACCCCAC.AGCCAGCA scaffold_9.trna1-LeuTAA Sc: 66.93  
GCTGGTTTGCCCGAGA.GGTt.A..AGGGGGAAGACTTAAGATCTTCTGCAC..ATAA......GTGCGCGTGGGTTCGAACCCCAC.AGCCAGCA scaffold_82.trna9-LeuTAA Sc: 66.93  
GCTGGTTTGCCCGAGA.GGTt.A..AGGGGGAAGACTTAAGATCTTCTGCAC..ATAA......GTGCGCGTGGGTTCGAACCCCAC.AGCCAGCA scaffold_70.trna1-LeuTAA Sc: 66.93  
GCTGGTTTGCCCGAGA.GGTt.A..AGGGGGAAGACTTAAGATCTTCTGCAC..ATAA......GTGCGCGTGGGTTCGAACCCCAC.AGCCAGCA scaffold_118.trna8-LeuTAA Sc: 66.93  
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