Genomic tRNA Database: Gallus gallus (galGal3 May 2006)

tRNAscan-SE Analysis of Gallus gallus (galGal3 May 2006)
>> Main Overview
>> tRNAs by Isotype
>> tRNAs by Locus
>> Secondary Structures
>> tRNA Alignments
>> FASTA Seqs
>> Run Options/Stats
>> Analysis Notes
>> Genome DB
>> Genome Seq
Structurally Aligned tRNAs (by Isotype & Anticodon)
Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

[Ala] [Arg] [Asn] [Asp] [Cys] [Gln] [Glu] [Gly] [His] [Ile] [Leu] [Lys] [Met] [Phe] [Pro] [Ser] [Thr] [Trp] [Tyr] [Val]
[Suppressor] [Selenocysteine]


Ala tRNAs


>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GGGGGATTAGCTCAAATGGT.A.GAGCGCTCGCTTAGCATGCGAGAG...........GtAGCGGGATCGATGCCCGCATCCTCCA chr3.trna8-AlaAGC Sc: 63.68  
GGGGAATTAGCTCAAATGGT.A.GAGCGCTCGCTTAGCATGCGAGAG...........GtAGCGGGATCGATGCCCGCATTCTCCA chrUn_random.trna15-AlaAGC Sc: 63.06  
GGGGAATTAGCTCAAATGGT.A.GAGCGCTCGCTTAGCATGCGAGAG...........GtAGCGGGATCGATGCCCGCATTCTCCA chrUn_random.trna14-AlaAGC Sc: 63.06  
GGGGAATTAGCTCAAATGGT.A.GAGCGCTCGCTTAGCATGCGAGAG...........GtAGCGGGATCGATGCCCGCATTCTCCA chrUn_random.trna1-AlaAGC Sc: 63.06  
GGGGAATTAGCTCAAATGGT.A.GAGCGCTCGCTTAGCATGCGAGAG...........GtAGCGGGATCGATGCCCGCATTCTCCA chr5.trna2-AlaAGC Sc: 63.06  
GGGGAATTAGCTCAAATGGT.A.GAGCGCTCGCTTAGCATGCGAGAG...........GtAGCGGGATCGATGCCCGCATTCTCCA chr5.trna11-AlaAGC Sc: 63.06  
GGGGAATTAGCTCAAATGGT.A.GAGCGCTCGCTTAGCATGCGAGAG...........GtAGCGGGATCGATGCCCGCATTCTCCA chr5.trna1-AlaAGC Sc: 63.06  
GGGGAATTAGCTCAAATGGT.A.GAGCGCTCGCTTAGCATGCGAGAG...........GtAGCGGGATCGATGCCCGCATTCTCCA chr2.trna9-AlaAGC Sc: 63.06  
GGGGAATTAGCTCAAATGGT.A.GAGCGCTCGCTTAGCATGCGAGAG...........GtAGCGGGATCGATGCCCGCATTCTCCA chr2.trna8-AlaAGC Sc: 63.06  
GGGGAATTAGCTCAAATGGT.A.GAGCGCTCGCTTAGCATGCGAGAG...........GtAGCGGGATCGATGCCCGCATTCTCCA chr2.trna41-AlaAGC Sc: 63.06  
GGGGAATTAGCTCAAATGGT.A.GAGCGCTCGCTTAGCATGCGAGAG...........GtAGCGGGATCGATGCCCGCATTCTCCA chr2.trna40-AlaAGC Sc: 63.06  
GGGGAATTAGCTCAAATGGT.A.GAGCGCTCGCTTAGCATGCGAGAG...........GtAGCGGGATCGATGCCCGCATTCTCCA chr2.trna39-AlaAGC Sc: 63.06  
GGGGAATTAGCTCAAATGGT.A.GAGCGCTCGCTTAGCATGCGAGAG...........GtAGCGGGATCGATGCCCGCATTCTCCA chr2.trna38-AlaAGC Sc: 63.06  
GGGGAATTAGCTCAAATGGT.A.GAGCGCTCGCTTAGCATGCGAGAG...........GtAGCGGGATCGATGCCCGCATTCTCCA chr2.trna10-AlaAGC Sc: 63.06  
GGGGAATTAGCTCAAATGGT.A.GAGCGCTCGCTTAGCATGTGAGAG...........GtAGCGGGATCAATGCCCGCATTCTCCA chrUn_random.trna16-AlaAGC Sc: 56.74  
GGGGAATTAGCTCAAGTGGT.A.GAGCGCTCGCTTAGCATGTGAGAG...........GcAGTGGGATCGATGCCCACATTCTCCA chr2.trna36-AlaAGC Sc: 53.97  
GGGGAATTAGCTCAAGTGGT.A.GAGCGCTTGCTTAGCATGTGAGAG...........GcAGCGGGATCGATGCCCGCATTCTCCA chrUn_random.trna2-AlaAGC Sc: 49.52  
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>.>>>.......<<<.<<<<<<<<.
GGGGAATTAGCTCAAGTGGT.A.GAGCGCTCGCTTAGCATGTGAGAG...........GcAGCGGGATCGATGCCCACATTCTCCA chrUn_random.trna10-AlaAGC Sc: 48.36  
GGGGAATTAGCTCAAGTGGT.A.GAGCGCTCGCTTAGCATGTGAGAG...........GcAGCGGGATCGATGCCCACATTCTCCA chr2.trna35-AlaAGC Sc: 48.36  

>>>>>>>..>>>............<<<.>>>.>.......<.<<<................>>>>>.......<<<<<<<<<<<<.
GTTTCTGTAGTGTAGT.GGTtA.TCACGTTCTCAAGGCACGCGAAAG...........GtCCCCGGTTCGAAACCGGGCAGAAACA chr16.trna2-AlaGGC Sc: 62.77  

>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GGGGATGTAGCTCAGC.GGG.A.GAGCGCTTGCTTCGCATGTAAGAG...........GtCCTGGGTTCAATCCCCAGCATCTCCA chr2.trna23-AlaCGC Sc: 70.20  
GGGGATGTAGCTCAGT.GGT.A.GAGCGCATGCTTCGCATGTGTGAG...........GtCCCAGGTTCAATCCCTGGCATCTCCA chr1.trna29-AlaCGC Sc: 70.02  

>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GGGGATGTAGCTCAGC.GGT.A.GAGCGCATGCTTTGCATGTATGAG...........GtCCCGGGTTCAATCCCCGGCATCTCCA chr15.trna3-AlaTGC Sc: 74.36  
GGGGATGTAGCTCAGT.GGT.A.GAGCGCATGCTTTGCATGTATGAG...........GcCCCGGGTTCAATCCCCGGCATCTCCA chr15.trna5-AlaTGC Sc: 72.71  
GGGGATGTAGCTCAGT.GGT.A.GAGCGCATGCTTTGCATGTATGAG...........GcCCCGGGTTCAATCCCCGGCATCTCCA chr15.trna4-AlaTGC Sc: 72.71  
GGGGATGTAGCTCAGC.GGT.A.GAGCGCCTGCTTTGCATGCAGGAG...........GcCCTGGGTTCAACCCCCAGCATCTCCA chrUn_random.trna18-AlaTGC Sc: 71.67  
GGGGATGTAGCTCAGC.GGT.A.GAGCGCCTGCTTTGCATGCAGGAG...........GcCCTGGGTTCAACCCCCAGCATCTCCA chrUn_random.trna12-AlaTGC Sc: 71.67  
GGGGATGTAGCTCAGC.GGT.A.GAGCGCCTGCTTTGCATGCAGGAG...........GcCCTGGGTTCAACCCCCAGCATCTCCA chr7.trna2-AlaTGC Sc: 71.67  
>>>>>>>..>>>>..........<<<<.>>.>>.......<<.<<................>>>>>.......<<<<<<<<<<<<.
GGGGATGTAGCTCAGT.GGT.A.GAGCACACGCTTTGCACGTATGAG...........GtCTCGGGTTTAATCCCTGGCATCTCCA chr5.trna12-AlaTGC Sc: 51.77  



Arg tRNAs


>>>>>>>..>>>...........<<<.>>>>>...........................<<<<<................>>>>>.......<<<<<<<<<<<<.
GGGCCAGTGGCGCAATGGAtA.ACGCGCCTGACTACGG....................ATCAGGAG...........AtTGCAGGTTCAACTCCTGCCTGGCTCG chr3.trna13-ArgACG Sc: 70.90  
GGGCCAGTGGCGCAATGGAtA.ACGCGTCTGACTACGG....................ATCAGAAG...........AtTCTAGGTTCGACTCCTGGCTGGCTCG chr2.trna4-ArgACG Sc: 68.07  
GGGCCAGTGGCGCAATGGAtA.ACGCGTCTGACTACGG....................ATCAGAAG...........AtTGTAGGTTCGACTCCTGCCTGGCTCG chr2.trna32-ArgACG Sc: 67.96  
GGGCCAGTGGCGCAATGGAtA.ACGCGTCTGACTACGG....................ATCAGAAG...........AtTGTAGGTTCGACTCCTGCCTGGCTCG chr2.trna31-ArgACG Sc: 67.96  
GGGCCAGTGGCGCAATGGAtA.ACGCGTCTGACTACGG....................ATCAGAAG...........AtTGTAGGTTCGACTCCTGCCTGGCTCG chr2.trna30-ArgACG Sc: 67.96  
GGGCCAGTGGCGCAATGGAtA.ACGCGTCTGACTACGG....................ATCAGAAG...........AtTGTAGGTTCGACTCCTGCCTGGCTCG chr2.trna11-ArgACG Sc: 67.96  


>>>>>>>..>>>>.........<<<<.>>>>>...........................<<<<<................>>>>>.......<<<<<<<<<<<<.
GACCCAGTGGCCTAATGGAtA.AGGCATCAGCCTCCGG....................AGCTGGGG...........AtTGTGGGTTCGAGTCCCATCTGGGTCG chr18.trna6-ArgCCG Sc: 65.49  
GGCCCAGTGGCCTAATGGAtA.AGGCATCAGCCTCCGG....................AGCTGGGG...........AtTGTGGGTTCAAGTCCCATCTGGGTCG chr18.trna12-ArgCCG Sc: 64.56  

>>>>>>>..>>>>.........<<<<.>>>>>...........................<<<<<................>>>>>.......<<<<<<<<<<<<.
GACCGCGTGGCCTAATGGAtA.AGGCGTCTGACTTCGG....................ATCAGAAG...........AtTGAGGGTTCGAGTCCCTTCGTGGTCG chr18.trna8-ArgTCG Sc: 70.52  
GACCACGTGGCCTAATGGAtA.AGGCGTCTGACTTCGG....................ATCAGAAG...........AtTGAGGGTTCGAGTCCCTTCGTGGTTG chr18.trna10-ArgTCG Sc: 67.43  

>>>>>>>..>>>>.........<<<<.>>>>>...........................<<<<<................>>>>>.......<<<<<<<<<<<<.
GCCCCAGTGGCCTAATGGAtA.AGGCACTGGCCTCCTA....................AGCCAGGG...........AtTGTGGGTTCGAGTCCCATCTGGGGTG chr18.trna9-ArgCCT Sc: 70.63  
GCCCCAGTGGCCTAATGGAtA.AGGCACTGGCCTCCTA....................AGCCAGGG...........AtTGTGGGTTCGAGTCCCATCTGGGGTG chr18.trna11-ArgCCT Sc: 70.63  
GCCCCAGTGGCCTAATGGAtA.AGGCATTGGCCTCCTA....................AGCCAGGG...........AtTGTGGGTTCGAGTCCCATCTGGGGTG chr1.trna5-ArgCCT Sc: 67.28  

>>>>>>>..>>>>.........<<<<.>>>>>...........................<<<<<................>>>>>.......<<<<<<<<<<<<.
GGCTCCGTGGCGCAATGGAtA.GCGCATTGGACTTCTAgagggttgaaggg.......ATTCAAAG...........GtTCCGGGTTCGAGTCCCGGCGGAGTCG chr8.trna2-ArgTCT Sc: 71.58  
GGCTCTGTGGCGCAATGGAtA.GCGCATTGGACTTCTAgcgcggcggtgacgggagtcATTCAAAG...........GtTGTGGGTTCGAGTCCCACCAGAGTCG chr17.trna2-ArgTCT Sc: 64.79  
GCCCCAGTGGCCTAATGGAtA.AGGCACTGGCCTTCTA....................AGTCAGGG...........AcTGTGGGTTCGAGTCCCACCTGGGGTG chr18.trna7-ArgTCT Sc: 64.36  



Asn tRNAs



>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GTCTCTGTGGCGCAATCGGTtAGCGCGTTCGGCTGTTAACCGAAAG...........GtTGGTGGTTCGAGCCCACCCAGGGACG chr28.trna1-AsnGTT Sc: 82.24  
GTCTCTGTGGCGCAATCGGTtAGCGCGTTCGGCTGTTAACCGAAAG...........GtTGGTGGTTCGAGCCCACCCAGGGACG chr27.trna1-AsnGTT Sc: 82.24  
GTCTCTGTGGCGCAATCGGTtAGCGCGTTCGGCTGTTAACCGAAAG...........GtTGGTGGTTCGAGCCCACCCAGGGACG chr2.trna2-AsnGTT Sc: 82.24  
GTCTCTGTGGCGCAATCGGTtAGCGCGTTCGGCTGTTAACCGAAAG...........GtTGGTGGTTCGAGCCCACCCAGGGACG chr16.trna16-AsnGTT Sc: 82.24  
GTCTCTGTGGCGCAATCGGTtAGCGCGTTCGGCTGTTAACCGAAAG...........GtTGGTGGTTCGAGCCCACCCAGGGACG chr1.trna25-AsnGTT Sc: 82.24  
GTCTCTGTGGCGCAATGGGTtAGCGCGTTCGGCTGTTAACCGAAAG...........GtTGGTGGTTCGAGCCCACCCAGGGACG chr2.trna16-AsnGTT Sc: 79.33  
GTCTCTGTGGCGCAATCGGTtAGCGCGTTCGGCTGTTAACCGAAAG...........GcTGGTGGTTCGAGCCCACCCAGGGACG chr2.trna1-AsnGTT Sc: 78.14  
GTCTCTGTGGCGCAATCGGTtAGCGCGTTCGGCTGTTAACTGAAAG...........GtTGGTGGTTCGAGCCCACCCAGGGACG chr9.trna1-AsnGTT Sc: 77.65  
>>>>>>>..>.>>.........<<.<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GTCTCTGTGGCGCAATCGGTtAGCACGTTCGGCTGTTAACCGAAAG...........GtTGGTGGTTCAAGCCCACCCAGGGACG chr2.trna47-AsnGTT Sc: 74.20  



Asp tRNAs



>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.
TCCTCGTTAGTATAGTGGTgA.GTATCCCCGCCTGTCACGCGGGAG...........ACCGGGGTTCGATTCCCCGACGGGGAG chr15.trna2-AspGTC Sc: 72.92  
TCCTCGTTAGTATAGTGGTgA.GTATCCCCGCCTGTCACGCGGGAG...........ACCGGGGTTCGATTCCCCGACGGGGAG chr13.trna1-AspGTC Sc: 72.92  
TCCTCGTTAGTATAGTGGTgA.GTATCCCCGCCTGTCACGCGGGAG...........ACCGGGGTTCGATTCCCCGACGGGGAG chr1.trna41-AspGTC Sc: 72.92  
TCCTCGTTAGTATAGTGGTgA.GTATCCCCGCCTGTCACGCGGGAG...........ACCGGGGTTCGATTCCCCGACGGGGAG chr1.trna36-AspGTC Sc: 72.92  
TCCTCGTTAGTATAGTGGTgA.GTATCCCCGCCTGTCACGCGGGAG...........ACCGGGGTTCGATTCCCCGACGGGGAG chr1.trna3-AspGTC Sc: 72.92  
TCCTCGTTAGTATAGTGGTgA.GTATCCCCGCCTGTCACGCGGGAG...........ACCGGGGTTCGATTCCCCGACGGGGAG chr1.trna16-AspGTC Sc: 72.92  
TCCTCGTTAGTATAGTGGTgA.GTATCCCCGCCTGTCACGCGGGAG...........ACCGGGGTTCGATTCCCCGACGGGGAG chr1.trna14-AspGTC Sc: 72.92  
TCCTCGTTAGTATAGTGGTaA.GTATCCCCGCCTGTCACGCGGGAG...........ACCGGGGTTCGATTCCCCGACGGGGAG chr1.trna2-AspGTC Sc: 71.60  



Cys tRNAs



>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GGGGGTATAGCTCAGTGGTA.GAGCATTTGACTGCAGATCAAGAG...........GtCCCCGGTTCAAATCCGGGTGCCCCCT chr27.trna4-CysGCA Sc: 77.71  
GGGGGTATAGCTCAGTGGTA.GAGCATTTGACTGCAGATCAAGAG...........GtCCCCGGTTCAAATCCGGGTGCCCCCT chr27.trna2-CysGCA Sc: 77.71  
GGGGGTATAGCTCAGTGGTA.GAGCATTTGACTGCAGATCAAGAG...........GtCCCTGGTTCAACTCCAGGTGCCCCCT chr27.trna9-CysGCA Sc: 74.72  
GGGGGTATAGCTCAGTGGTA.GAGCATTTGACTGCAGATCAAGAG...........GtCCCTGGTTCAACTCCAGGTGCCCCCT chr27.trna5-CysGCA Sc: 74.72  
GGGGGTATAGCTCAGTGGTA.GAGCATTTGACTGCAGATCAAGAG...........GtCCCTGGTTCAACTCCAGGTGCCCCCT chr27.trna12-CysGCA Sc: 74.72  
GGGGGTATAGCTCAGTGGTA.GAGCATTTGACTGCAGATCAAGAG...........GtCCCTGGTTCAACTCCAGGTGCCCCCT chr27.trna11-CysGCA Sc: 74.72  
GGGGGTATAGCTCAGTGGTA.GAGCATTTGACTGCAGATCAAGAG...........GtCCCTGGTTCAACTCCAGGTGCCCCCT chr27.trna10-CysGCA Sc: 74.72  
GGGGGTATAGCTCAGGGGTA.GAGCATTTGACTGCAGATCAAGAG...........GtCCCCGGTTCAAATCCGGGTGCCCCCT chr27.trna7-CysGCA Sc: 74.26  
GGGGGTATAGCTCAGGGGTA.GAGCATTTGACTGCAGATCAAGAG...........GtCCCCGGTTCAAATCCGGGTGCCCCCT chr27.trna3-CysGCA Sc: 74.26  
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>.>>.......<<.<<<<<<<<<.
GGGGGTATAGCTCAGTGGTA.GAGCATTTGACTGCAGATCAAGAG...........GtCCCCGGTTCAACTCCAGGTGCCCCCT chr27.trna8-CysGCA Sc: 70.08  



Gln tRNAs


>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.
GGTTCCATGGTGTAATGGTtA.GCACTCTGGACTCTGAATCCAGCG...........ATCCGAGTTCAAATCTCGGTGGAACCT chr18.trna3-GlnCTG Sc: 73.65  
GGTTCCATGGTGTAATGGTtA.GCACTCTGGACTCTGAATCCAGCG...........ATCCGAGTTCAAATCTCGGTGGAACCT chr10.trna3-GlnCTG Sc: 73.65  
GGTCCCATGGTGTAAAGGTgA.GCACTCTGGACTCTGAATCCAGCG...........ATCTGAGTTCAAATCTCAGTGGGACCT chrUn_random.trna3-GlnCTG Sc: 64.53  

>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.
GGTCCCATGGTGTAATGGTtA.GCACTCTGGACTTTGAATCCAGCG...........ATCCGAGTTCAAATCTCGGTGGGACCT chrUn_random.trna13-GlnTTG Sc: 73.77  
GGTCCCATGGTGTAATGGTtA.GCACTCTGGACTTTGAATCCAGCG...........ATCCGAGTTCAAATCTCGGTGGGACCT chr27.trna13-GlnTTG Sc: 73.77  
GGTTCTATGGTGTAATGGTtA.GCACTCTGGACTTTGAATCCAGCG...........ATCCGAGTTCAAATCTCGGTAGAACCT chr18.trna4-GlnTTG Sc: 72.03  



Glu tRNAs


>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.
TCCCTGGTGGTCTAGTGGTtA.GGATTCGGCGCTCTCACCGCCGCG...........GCCCGGGTTCGATTCCCGGTCAGGGAA chrUn_random.trna17-GluCTC Sc: 76.61  
TCCCTGGTGGTCTAGTGGTtA.GGATTCGGCGCTCTCACCGCCGCG...........GCCCGGGTTCGATTCCCGGTCAGGGAA chr3.trna5-GluCTC Sc: 76.61  
TCCCTGGTGGTCTAGTGGTtA.GGATTCGGCGCTCTCACCGCCGCG...........GCCCGGGTTCGATTCCCGGTCAGGGAA chr3.trna3-GluCTC Sc: 76.61  
TCCCTGGTGGTCTAGTGGTtA.GGATTCGGCGCTCTCACCGCCGCG...........GCCCGGGTTCGATTCCCGGTCAGGGAA chr20.trna2-GluCTC Sc: 76.61  
TCCCTGGTGGTCTAGTGGTtA.GGATTCGGCGCTCTCACCGCCGCG...........GCCCGGGTTCGATTCCCGGTCAGGGAA chr2.trna28-GluCTC Sc: 76.61  
TCCCTGGTGGTCTAGTGGTtA.GGATTCGGCGCTCTCACCGCCGCG...........GCCCGGGTTCGATTCCCGGTCAGGGAA chr16.trna9-GluCTC Sc: 76.61  
TCCCTGGTGGTCTAGTGGTtA.GGATTCGGCGCTCTCACCGCCGCG...........GCCCGGGTTCGATTCCCGGTCAGGGAA chr16.trna4-GluCTC Sc: 76.61  

>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.
TCCCATATGGTCTAGTGGTtA.GGATTCCTGGTTTTCACCCAGGCG...........GCCCGGGTTCGACTCCCGGTATGGGAA chr6.trna1-GluTTC Sc: 77.45  
TCCCTGGTGGTCTAGTGGTtA.GGATCCGGCGCTTTCACCGCCGAG...........GCCCGGGTTCGATTCCCGGTCAGGGAA chr16.trna8-GluTTC Sc: 76.53  
TCCCACATGGTCTAGCGGTtA.GGATTCCTGGTTTTCACCCAGGCG...........GCCCGGGTTCGACTCCCGGTGTGGGAA chr20.trna1-GluTTC Sc: 76.26  
TCCCATATGGTCTAGCGGTtA.GGATTCCTGGTTTTCACCCAGGCG...........GCCCGGGTTCGACTCCCGGTATGGGAA chr4.trna1-GluTTC Sc: 75.00  
TCCCACATGGTCTAGCGGTtA.GGATTTCTGGTTTTCACCCAGGCA...........GCCCGGGTTCGACTCCCGGTGTGGGAA chr20.trna3-GluTTC Sc: 69.28  
TCCCACATGGTCTAGCGGTtA.GGATTTCTGGTTTTCACCCAGGCA...........GCCCGGGTTCGACTCCCGGTGTGGGAA chr2.trna13-GluTTC Sc: 69.28  
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>.>.......<.<<<<<<<<<<.
TCCCTGGTGGTCTAGTGGCtA.GGATTCGGCGCTTTCACCGCCGCG...........GCCCGCGTTCGATTCCCGGTCAGGGAA chr16.trna18-GluTTC Sc: 65.68  



Gly tRNAs



>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.
GCATTGGTGGTTCAGTGGT.A.GAATTCTCGCCTGCCACGCGGGAG...........GCCCGGGTTCGATTCCCGGCCAATGCA chr7.trna10-GlyGCC Sc: 81.62  
GCATTGGTGGTTCAGTGGT.A.GAATTCTCGCCTGCCACGCGGGAG...........GCCCGGGTTCGATTCCCGGCCAATGCA chr3.trna19-GlyGCC Sc: 81.62  
GCATTGGTGGTTCAGTGGT.A.GAATTCTCGCCTGCCACGCGGGAG...........GCCCGGGTTCGATTCCCGGCCAATGCA chr19.trna1-GlyGCC Sc: 81.62  
GCATTGGTGGTTCAGTGGT.A.GAATTCTCGCCTGCCACGCGGGAG...........GCCCGGGTTCGATTCCCGGCCAATGCA chr11.trna5-GlyGCC Sc: 81.62  
GCATTGGTGGTTCAGTGGT.A.GAATTCTTGCCTGCCACGCGGGAG...........GCCCGGGTTCGATTCCCGGCCAATGCA chr11.trna2-GlyGCC Sc: 75.67  

>>>>>>>..>>>...........<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.
GCACCAGTGGTGTAGTGGT.A.TCATGCAAGATTCCCATTCTTGCG...........ACCCGGGTTCGATTCCCGGCTGGTGCA chr8.trna1-GlyCCC Sc: 78.57  
GCGCCGCTGGTGTAGTGGT.A.TCATGCAAGATTCCCATTCTTGCG...........ACCCGGGTTCGATTCCCGGGCGGCGCA chr5.trna10-GlyCCC Sc: 76.98  
GCGCCGCTGGTGTAGTGGT.A.TCATGCAAGATTCCCATTCTTGCG...........ACCCGGGTTCGATTCCCGGGCGGCGCA chr14.trna3-GlyCCC Sc: 76.98  
GCGCCGCTGGTGTAGTGGT.A.TCATGCAAGATTCCCATTCTTGCG...........ACCCGGGTTCGATTCCCGGGCGGCGCA chr1.trna42-GlyCCC Sc: 76.98  

>>>>>>>..>>.>.........<.<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.
GCGTTGGTGGTATAGTGGTtA.GCATAGCTGCCTTCCAAGCAGTTG...........ACCCGGGTTCGATTCCCGGCCAACGCA chr28.trna3-GlyTCC Sc: 76.83  
GCGTTGGTGGTATAGTGGTgA.GCATAGCTGCCTTCCAAGCAGTTG...........ACCCGGGTTCGATTCCCGGCCAACGCA chr5.trna8-GlyTCC Sc: 73.26  
GCGTTGGTGGTATAGTGGTgA.GCATAGCTGCCTTCCAAGCAGTTG...........ACCCGGGTTCGATTCCCGGCCAACGCA chr5.trna7-GlyTCC Sc: 73.26  
GCGTTGGTGGTATAGTGGTgA.GCATAGCTGCCTTCCAAGCAGTTG...........ACCCGGGTTCGATTCCCGGCCAACGCA chr3.trna17-GlyTCC Sc: 73.26  
GCGTTGGTGGTATAGTGGTgA.GCATAGCTGCCTTCCAAGCAGTTG...........ACCCGGGTTTGATTCCCGGCCAACGCA chrUn_random.trna6-GlyTCC Sc: 66.35  
GCGTTGGTGGTATAGTGGTgA.GCATAGCTGCCTTCCAAGCAGTTG...........ACCCGGGTTCGATTCCTGGCCAACGCA chr18.trna13-GlyTCC Sc: 66.28  
>>.>>>>..>>.>.........<.<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<.<<.
GCATTGGTGGTATAGTGGTgA.GCATAGCTGCCTTCCAAGCAGTTG...........ACCCGGGTTGGATTCCCGGCCAACGCA chrUn_random.trna11-GlyTCC Sc: 61.60  
>>>>>>>..>>.>.........<.<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.
GTGTTGGTGGTATAGTGGTgA.GCATAGCTGCCTTCCAAGCAGTTG...........ACCCGGGTTTGATTCCCGGCCAACGCA chrUn_random.trna5-GlyTCC Sc: 60.65  



His tRNAs


>>>>.>>..>>>...........<<<.>>>.>.......<.<<<................>>>>>.......<<<<<<<.<<<<.
GAGCCAGTGGTGCAATGGAtA.ACACATCTGGCTATGGATAAGAAG...........AcTGTAGGTTCGACTCCTGCCTAGCTTG chr3.trna18-HisATG Sc: 37.81  

>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GCCGTGATCGTATAGTGGTtA.GTACTCTGCGTTGTGGCCGCAGCA...........A.CCTCGGTTCGAATCCGAGTCACGGCA chr10.trna4-HisGTG Sc: 64.63  
GCCGTGATCGTATAGTGGTtA.GTACTCTGCGTTGTGGCCGCAGCA...........A.CCTCGGTTCAAATCCGAGTCACGGCA chrZ.trna3-HisGTG Sc: 62.89  
GCCGTGATCGTATAGTGGTtA.GTACTCTGCGTTGTGGCCGCAGCA...........A.CCTCGGTTCAAATCCGAGTCACGGCA chr6.trna3-HisGTG Sc: 62.89  
GCCGTGATCGTATAGTGGTtA.GTACTCTGCGTTGTGGCCGCAGCA...........A.CCTCGGTTCAAATCCGAGTCACGGCA chr6.trna2-HisGTG Sc: 62.89  
GCCGTGATCGTATAGTGGTcA.GTACTCTGCGTTGTGGCCGCAGCA...........A.CCTCGGTTCGAATCCGAGTCACGGCA chr5.trna6-HisGTG Sc: 62.54  
GCCGTGATCGTATAGTGGTcA.GTACTCTGCGTTGTGGCCGCAGCA...........A.CCTCGGTTCGAATCCGAGTCACGGCA chr1.trna37-HisGTG Sc: 62.54  
GCTGTGATTGTATAGTGGTcA.GTACTCTGCGTTGTGGCCGCAGCA...........A.CCTCGGTTCGAATCCGAGTCACAGCA chr11.trna1-HisGTG Sc: 60.94  



Ile tRNAs


>>>>.>>..>>>>.........<<<<.>>>>>............................<<<<<................>>>>>.......<<<<<<<.<<<<.
GGCCGGTTAGCTCAGTTGGTtAGAGCGTGGTGCTAATA.....................ACGCCAAG...........GtCGCGGGTTCGATCCCCGTACGGGCCA chr5.trna3-IleAAT Sc: 80.66  
GGCCGGTTAGCTCAGTTGGTtAGAGCGTGGTGCTAATA.....................ACGCCAAG...........GtCGCGGGTTCGATCCCCGTACGGGCCA chr10.trna1-IleAAT Sc: 80.66  
GGCCGGTTAGCTCAGTTGGTtAGAGCGTGGTGCTAATA.....................ACGCCAAG...........GtCGCGGGTTCGATCCCCGTACGGGCCA chr1.trna18-IleAAT Sc: 80.66  
GGCCGGTTAGCTCAGTTGGTtAGAGCGTGGTGCTAATA.....................ACGCCAAG...........GtCGCGGGTTCGATCCCCGTACGGGCCA chr1.trna17-IleAAT Sc: 80.66  
GGCCGGTTAGCTCAGTTGGTtAGAGCGTGGTGCTAATA.....................ACGCCAAG...........GtCGCGGGTTCGATCCCCGTACGGGCCA chr1.trna15-IleAAT Sc: 80.66  
GGCCGGTTAGCTCAGTTGGTtAGAGCGTGGTGCTAATA.....................ACGCCAAG...........GtCGCGGGTTCGATCCCCGTACGGGCCA chr1.trna13-IleAAT Sc: 80.66  
GGCCGGTTAGCTCAGTTGGTtAGAGCGTGGTGCTAATA.....................ACGCCAAG...........GtCGCGGGTTCGATCCCCGTACGGGCCA chr1.trna12-IleAAT Sc: 80.66  


>>>>>>>..>>>>.........<<<<.>>>>>............................<<<<<................>>>>>.......<<<<<<<<<<<<.
GCTCCAGTGGCGCAATCGGTtAGCGCGCGGTACTTATAcagcagtactaaagccgagcaATGCCGAG...........GtTGTGAGTTCGAGCCTCACCTGGAGCA chr3.trna1-IleTAT Sc: 67.88  
GCTCCAGTGGCGCAATCGGTtAGCGCGCGGTACTTATAcagcagtactgaagccgagcaATGCCGAG...........GtTGTGAGTTCGAGCCTCACCTGGAGCA chrZ.trna2-IleTAT Sc: 67.23  



Leu tRNAs


>>>>>>>..>>>............<<<.>>>>>......................................<<<<<.>>>>>..........<<<<<..>>>>>.......<<<<<.<<<<<<<.
GGTAGCGTGGCCGAGCGGTctA.AGGCGCTGGATTAAGG...............................CTCCAGTCCCTG..........CGGGGGCGTGGGTTCGAATCCCAC.CGCTGCCA chr16.trna1-LeuAAG Sc: 71.07  
>>>>>>>..>>>............<<<.>>>>>......................................<<<<<.>>>>............<<<<..>>>>>.......<<<<<.<<<<<<<.
GGTAGCGTGGCCGAGCGGTctA.AGGCGCTGGATTAAGG...............................CTCCAGTCTCT..TC........GGGGGCGTGGGTTCGAATCCCAC.CGCTGCCA chr16.trna17-LeuAAG Sc: 69.84  
GGTAGCGTGGCCGAGCGGTctA.AGGCGCTGGATTAAGG...............................CTCCAGTCTCT..TC........GGGGGCGTGGGTTCGAATCCCAC.CGCTGCCA chr14.trna2-LeuAAG Sc: 69.84  


>>>>>>>..>>>............<<<.>>>>>......................................<<<<<.>>>>............<<<<..>>>>>.......<<<<<.<<<<<<<.
GTCAGGATGGCCGAGCGGTctA.AGGCGCTGCGTTCAGG...............................TCGCAGTCTCC..TCT.......GGAGGCGTGGGTTCGAATCCCAC.TTCTGACA chr7.trna1-LeuCAG Sc: 77.82  
GTCAGGATGGCCGAGCGGTctA.AGGCGCTGCGTTCAGG...............................TCGCAGTCTCC..CCT.......GGAGGCGTGGGTTCGAATCCCAC.TCCTGACA chr1.trna11-LeuCAG Sc: 77.22  
GTCAGGATGGCCGAGCGGTctA.AGGCGCTGCGTTCAGG...............................TCGCAGTCTCC..CCT.......GGAGGCGTGGGTTCGAATCCCAC.TTCTGACA chr4.trna4-LeuCAG Sc: 75.90  
GTCAGGATGGCCGAGCGGTctA.AGGCGCTGCGTTCAGG...............................TCGCAGTCTCC..CCT.......GGAGGCGTGGGTTCGAATCCCAC.TTCTGACA chr4.trna3-LeuCAG Sc: 75.90  
GTCAGGATGGCCGAGCGGTctA.AGGCGCTGCGTTCAGG...............................TCGCAGTCTCC..CCT.......GGAGGCGTGGGTTCGAATCCCAC.TTCTGACA chr3.trna6-LeuCAG Sc: 75.90  
GTCAGGATGGCCGAGCGGTctA.AGGCGCTGCGTTCAGG...............................TCGCAGTCTCC..CCT.......GGAGGCGTGGGTTCAAATCCCAC.TCCTGACA chr7.trna21-LeuCAG Sc: 75.49  

>>>>>>>..>>>............<<<.>>>>>......................................<<<<<.>>>>............<<<<..>>>>>.......<<<<<.<<<<<<<.
GGTAGCGTGGCCGAGTGGTctA.AGGCGCTGGATTTAGG...............................CTCCAGTCATT..TC........GATGGCGTGGGTTCGAATCCCAC.CGCTGCCA chr14.trna4-LeuTAG Sc: 68.14  

>>>>>>>..>>>............<<<.>>>>>......................................<<<<<.>>>>............<<<<..>>>>>.......<<<<<.<<<<<<<.
GTCAGGATGGCCGAGTGGTctA.AGGCGCCAGACTCAAGgctgtgccttcccgatgggat..........TTCTGGTCTCC..GAT.......GGAGGCGTGGGTTCGAATCCCAC.TCCTGACA chr16.trna6-LeuCAA Sc: 70.56  
>>>>>>>..>>>............<<<.>>>>>......................................<<<<<.>>>>>..........<<<<<..>>>>>.......<<<<<.<<<<<<<.
GTCAGGATGGCCGAGTGGTctA.AGGCGCCAGACTCAAGgcgtaccgcgccttcccatggcggttgggtaTTCTGGTCTCCGA........ATGGAGGCGTGGGTTCGAATCCCAC.TTCTGACA chr4.trna5-LeuCAA Sc: 62.94  

>>>>>>>..>>>............<<<.>>>>>......................................<<<<<.>>>>............<<<<..>>>>>.......<<<<<.<<<<<<<.
ACCAGGATGGCCGAGTGGTt.A.AGGCGTTGGACTTAAG...............................ATCCAATGGAC..GTAT......GTCCGCGTGGGTTCGAACCCCAC.TCCTGGTA chr3.trna2-LeuTAA Sc: 81.03  
ACCAGGATGGCCGAGTGGTg.A.AGGCGTTGGACTTAAG...............................ATCCAATGGGC..GCAT......GCCCGCGTGGGTTCGAACCCCAC.TTCTGGTA chr12.trna1-LeuTAA Sc: 77.90  



Lys tRNAs


>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GCCCGGCTAGCTCAGTCGGTAGAGCATGGGACTCTTAATCCCAGG...........GtCGTGGGTTCGAGCCCCACGTTGGGCG chr5.trna5-LysCTT Sc: 80.72  
GCCCGGCTAGCTCAGTCGGTAGAGCATGGGACTCTTAATCCCAGG...........GtCGTGGGTTCGAGCCCCACGTTGGGCG chr10.trna2-LysCTT Sc: 80.72  
GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGG...........GtCGTGGGTTCGAGCCCCACGTTGGGCG chr16.trna5-LysCTT Sc: 80.47  
GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGG...........GtCGTGGGTTCGAGCCCCACGTTGGGCG chr16.trna3-LysCTT Sc: 80.47  
GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGG...........GtCGTGGGTTCGAGCCCCACGTTGGGCG chr16.trna11-LysCTT Sc: 80.47  
GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGG...........GtCGTGGGTTCGAGCCCCACGTTGGGCG chr16.trna10-LysCTT Sc: 80.47  

>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GCCCGGATAGCTCAGTCGGTAGAGCATCAGACTTTTAATCTGAGG...........GtCCAGGGTTCAAGTCCCTGTTCGGGCG chr26.trna1-LysTTT Sc: 83.80  
GCCCGGATAGCTCAGTCGGCAGAGCATCAGACTTTTAATCTGAGG...........GtCCAGGGTTCAAGTCCCTGTTCGGGCG chrUn_random.trna4-LysTTT Sc: 79.88  
GCCTGGATAGCTCAGTTGGGAGAGCATCAGACTTTTAATCTGAGG...........GtCCAGGGTTCAAGCCCCTGTTCAGGCG chr11.trna6-LysTTT Sc: 78.28  



Met tRNAs


>>>>>>>..>>>>.........<<<<.>>>>.........<<<<................>>>>>.......<<<<<<<<<<<<.
GCCTCGTTAGCGCAGTAGGTA.GCGCGTCAGTCTCATAATCTGAAG...........GtCGTGAGTTCGATCCTCACACGGGGCA chr2.trna26-MetCAT Sc: 79.85  
GCCTCGTTAGCGCAGTAGGTA.GCGCGTCAGTCTCATAATCTGAAG...........GtCGTGAGTTCGAGCCTCACACGGGGCA chr11.trna4-MetCAT Sc: 78.43  
GCCCTCTTAGCGCAGCCGGCA.GCGCGTCAGTCTCATAATCTGAAG...........GtCCTGAGTTCGAGCCTCAGAGAGGGCA chr7.trna8-MetCAT Sc: 76.15  
GCCCTCTTAGCGCAGCAGGCA.GCGCGTCAGTCTCATAATCTGAAG...........GtCCTGAGTTCGAGCCTCAGAGAGGGCA chr7.trna12-MetCAT Sc: 72.25  
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
AGCAGAGTGGCGCAGC.GGAA.GCGTGCTGGGCCCATAACCCAGAG...........GtCGATGGATCGAAACCATCCTCTGCTA chr3.trna7-MetCAT Sc: 68.98  
AGCAGAGTGGCGCAGC.GGAA.GCGTGCTGGGCCCATAACCCAGAG...........GtCGATGGATCGAAACCATCCTCTGCTA chr3.trna15-MetCAT Sc: 68.98  
AGCAGAGTGGCGCAGC.GGAA.GCGTGCTGGGCCCATAACCCAGAG...........GtCGATGGATCGAAACCATCCTCTGCTA chr2.trna46-MetCAT Sc: 68.98  
AGCAGAGTGGCGCAGC.GGAA.GCGTGCTGGGCCCATAACCCAGAG...........GtCGATGGATCGAAACCATCCTCTGCTA chr2.trna3-MetCAT Sc: 68.98  
AGCAGAGTGGCGCAGC.GGAA.GCGTGCTGGGCCCATAACCCAGAG...........GtCGATGGATCGAAACCATCCTCTGCTA chr18.trna2-MetCAT Sc: 68.98  
AGCAGAGTGGCGCAGC.GGAA.GCGTGCTGGGCCCATAACCCAGAG...........GtCGATGGATCGAAACCATCCTCTGCTA chr18.trna1-MetCAT Sc: 68.98  
AGCAGAGTGGCGCAGC.GGAA.GCGTGCTGGGCCCATAACCCAGAG...........GtCGATGGATCGAAACCATCCTCTGCTA chr1.trna1-MetCAT Sc: 68.98  
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>.>>.......<<.<<<<<<<<<.
AGCAGAGTGGCGCAGC.GGAA.GCGTGCTGGGCCCATAACCCAGAG...........GtCGATGGATCGAAACCTTCCTCTGCTA chr10.trna5-MetCAT Sc: 66.33  
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
AGCAGAGTGGCGCAGC.GGGA.GCGTGCTGGGCCCATAACCCAGAG...........GtCGATGGATCAAAACCATCCTCTGCTA chr4.trna2-MetCAT Sc: 65.86  



Phe tRNAs


>>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>..........<<<<...>>>>>.......<<<<<.<<<<<<<.
GTAGTCGTGGCCGAGT.GGTtA.AGGCGATGGACTAAAAATCCATT.GGGTTCT.......GCCCG.CGCAGGTTCGAATCCTGC.CGACTACG chr1.trna40-PheAAA Sc: 86.60  

>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<.......................>>>>>.......<<<<<.<<<<<<<.
GCCGAAATAGCTCAGTTGGG.A.GAGCGTTAGACTGAAGATCTAAAG..................GtCCCTGGTTCGATCCCGGG.TTTCGGCA chr28.trna4-PheGAA Sc: 84.19  
GCCGAAATAGCTCAGTTGGG.A.GAGCGTTAGACTGAAGATCTAAAG..................GtCCCTGGTTCGATCCCGGG.TTTCGGCA chr15.trna1-PheGAA Sc: 84.19  
GCCGAAATAGCTCAGTTGGG.A.GAGCGTTAGACTGAAGATCTAAAG..................GtCCCTGGTTCGATCCCGGG.TTTCGGCA chr1.trna22-PheGAA Sc: 84.19  
GCCGAAATAGCTCAGCTGGG.A.GAGCGTTAGACTGAAGATCTAAAG..................GtCCCTGGTTCAATCCCGGG.TTTCGGCA chr1.trna31-PheGAA Sc: 80.00  
GCTGAAGTAGCTCAGCTGGG.A.GAGCGTTAGACTGAAGATCTAAAG..................GtCCCTGGTTCAATCCCGGG.CTTCAGCA chr2.trna21-PheGAA Sc: 78.80  
GCTGAAGTAGCTCAGCTGGG.A.GAGCGTTAGACTGAAGATCTAAAG..................GtCCCTGGTTCAATCCCGGG.CTTCAGCA chr2.trna20-PheGAA Sc: 78.80  
GCTGAAGTAGCTCAGCTGGG.A.GAGCGTTAGACTGAAGATCTAAAG..................GtCCCTGGTTCAATCCCGGG.CTTCAGCA chr2.trna19-PheGAA Sc: 78.80  
GCTGAAGTAGCTCAGCTGGG.A.GAGCGTTAGACTGAAGATCTAAAG..................GtCCCTGGTTCAACCCCGGG.CTTCAGCA chr2.trna18-PheGAA Sc: 76.10  
GCTGAAGTAGCTCAGCTGGG.A.GAGCGTTAGACTGAAGATCTAAAG..................GtCCCTGGTTCAACCCCGGG.CTTCAGCA chr2.trna17-PheGAA Sc: 76.10  



Pro tRNAs


>>>>>>>..>>>..........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GGCTCGTTGGTCTAGGGGTA.TGATTCTCGCTTAGGGTGCGAGAG...........GtCCCGGGTTCAAATCCCGGACGAGCCC chr7.trna20-ProAGG Sc: 75.92  
GGCTCGTTGGTCTAGGGGTA.TGATTCTCGCTTAGGGTGCGAGAG...........GtCCCGGGTTCAAATCCCGGACGAGCCC chr2.trna5-ProAGG Sc: 75.92  
GGCTCGTTGGTCTAGGGGTA.TGATTCTCGCTTAGGGTGCGAGAG...........GtCCCGGGTTCAAATCCCGGACGAGCCC chr2.trna43-ProAGG Sc: 75.92  
GGCTCGTTGGTCTAGGGGTA.TGATTCTCGCTTAGGGTGCGAGAG...........GtCCCGGGTTCAAATCCCGGACGAGCCC chr1.trna34-ProAGG Sc: 75.92  
GGCTCGTTGGTCTAGGGGTA.TGATTCTCGCTTAGGGTGCGAGAG...........GtCCCGGGTTCAAATCCCGGACGAGCCC chr1.trna27-ProAGG Sc: 75.92  
GGCTCGTTGGTCTAGGGGTA.TGATTCTCGCTTAGGGTGCGAGAG...........GtCCCGGGTTCAAATCCCGGACGAGCCC chr1.trna19-ProAGG Sc: 75.92  


>>>>>>>..>>>..........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GGCTCGTTGGTCTAGGGGTA.TGATTCTCGCTTCGGGTGCGAGAG...........GtCCCGGGTTCAAATCCCGGACGAGCCC chr2.trna44-ProCGG Sc: 76.52  
GGCTCGTTGGTCTAGGGGTA.TGATTCTCGCTTCGGGTGCGAGAG...........GtCCCGGGTTCAACTCCCGGACGAGCCC chr7.trna3-ProCGG Sc: 73.58  

>>>>>>>..>>>..........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GGCTCGTTGGTCTAGGGGTA.TGATTCTCGCTTTGGGTGCGAGAG...........GtCCCGGGTTCAAATCCCGGACGAGCCC chr7.trna17-ProTGG Sc: 76.15  
GGCTCGTTGGTCTAGGGGTA.TGATTCTCGCTTTGGGTGCGAGAG...........GtCCCGGGTTCAAATCCCGGACGAGCCC chr16.trna13-ProTGG Sc: 76.15  
GGCTTGTTGGTCTAGGGGTA.TGATTCTCGCTTTGGGTGCGAGAG...........GtCCCGGGTTCAAATCCCGGACAAGCCC chr1.trna23-ProTGG Sc: 74.70  



SeC tRNAs


>>>>>>>....>>>>.........<<<<.>>>>>.......<<<<<.>.>>........<<.<..>>>>>.......<<<<.<.<<<<<<<.
GCCCGGATGacCCTCAGTGGTcT.GGGGTGCAGGCTTCAAACCTGTAGCTGTCTAg...CGACAGAGTGGTTCAATTCCACcT.TTCGGGC. chr3.trna20-SeC(e)TCA Sc: 75.58  



Ser tRNAs


>>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>.......<<<<..>>>>>.......<<<<<.<<<<<<<.
GTAGTCGTGGCCGAGTGGTtA.AGGCGATGGACTAGAAATCCATTGGGGTTT....CCCCGCGCAGGTTCGAATCCTGC.CGACTACG chr3.trna16-SerAGA Sc: 88.50  
GTAGTCGTGGCCGAGTGGTtA.AGGCGATGGACTAGAAATCCATTGGGGTCT....CCCCGCGCAGGTTCGAATCCTGC.CGACTACG chr3.trna14-SerAGA Sc: 88.01  
GTAGTCGTGGCCGAGTGGTtA.AGGCGATGGACTAGAAATCCATTGGGGTCT....CCCCGCGCAGGTTCGAATCCTGC.CGACTACG chr2.trna27-SerAGA Sc: 88.01  
GTAGTCGTGGCCGAGTGGTtA.AGGCGATGGACTAGAAATCCATTGGGTTCT....GCCCGCGCAGGTTCGAATCCTGC.CGACTACG chrUn_random.trna8-SerAGA Sc: 86.55  
GTAGTCGTGGCCGAGTGGTtA.AGGCGATGGACTAGAAATCCATTGGGTTCT....GCCCGCGCAGGTTCGAATCCTGC.CGACTACG chr1.trna9-SerAGA Sc: 86.55  
GTAGTCGTGGCCGAGTGGTtA.AGGCGATGGACTAGAAATCCATTGGGTTCT....GCCCGCGCAGGTTCGAATCCTGC.CGACTACG chr1.trna8-SerAGA Sc: 86.55  
GTAGTCGTGGCCGAGTGGTtA.AGGCGATGGACTAGAAATCCATTGGGTTCT....GCCCGCGCAGGTTCGAATCCTGC.CGACTACG chr1.trna10-SerAGA Sc: 86.55  
GTAGTCGTGGCCGAGTGGTtA.AGGCGATGGACTAGAAATCCATTGGGGTCC....CCCCGCGCAGGTTCGAATCCTGC.CGACTACG chr1.trna38-SerAGA Sc: 85.55  


>>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>.......<<<<..>>>>>.......<<<<<.<<<<<<<.
GCTGTGATGGCCGAGAGGTgA.AGGCGTTGGACTCGAAATCCAATAGGGTTT....CCCTGCGCAGGTTCGAATCCTGC.TCACAGCG chr7.trna19-SerCGA Sc: 80.71  
GCTGTGATGGCCGAGAGGTgA.AGGCGTTGGACTCGAAATCCAATAGGGTTT....CCCTGCGCAGGTTCGAATCCTGC.TCACAGCG chr7.trna18-SerCGA Sc: 80.71  

>>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>.......<<<<..>>>>>.......<<<<<.<<<<<<<.
GCAGCGATGGCCGAGTGGTtA.AGGCGTTGGACTTGAAATCCAATGGGGTCT....CCCCGCGCAGGTTCGAACCCTGC.TCGCTGCG chr6.trna4-SerTGA Sc: 90.86  
GCTGTGATGGCCGAGTGGTgA.AGGTGTTGGACTTGAAATCCAATGGGGTTT....CCCCGCGCAGGTTCAAATCCTGC.TCACAGCG chr19.trna2-SerTGA Sc: 85.43  
GCTGTGATGGCCGAGGGGTgA.AGGCGTTGGACTTGAAATCCAATAGGGTTT....CCCTGCGCAGGTTCGAATCCTGC.TCACAGCG chr7.trna16-SerTGA Sc: 81.44  
GCTGTGATGGCCGAGGGGTgA.AGGCGTTGGACTTGAAATCCAATAGGGTTT....CCCTGCGCAGGTTCGAATCCTGC.TCACAGCG chr7.trna14-SerTGA Sc: 81.44  


>>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>.......<<<<..>>>>>.......<<<<<.<<<<<<<.
GACGAGGTGGCCGAGTGGTtA.AGGCGATGGACTGCTAATCCATTGTGCTCT....GCACGCGTGGGTTCGAATCCCAC.CTTCGTCG chr7.trna9-SerGCT Sc: 86.80  
GACGAGGTGGCCGAGTGGTtA.AGGCGATGGACTGCTAATCCATTGTGCTCT....GCACGCGTGGGTTCGAATCCCAT.CCTCGTCG chr27.trna14-SerGCT Sc: 85.34  
GACGAGGTGGCCGAGTGGTtA.AGGCGATGGACTGCTAATCCATTGTGCTCT....GCACGCGTGGGTTCGAATCCCAT.CCTCGTCG chr2.trna25-SerGCT Sc: 85.34  
GACGAGGTGGCCGAGTGGTtA.AGGCGATGGACTGCTAATCCATTGTGCTCT....GCACGCGTGGGTTCGAATCCCAT.CCTCGTCG chr2.trna24-SerGCT Sc: 85.34  
GACGAGGTGGCCGAGTGGTgA.AGGTGATGGACTGCTAATCCATTGTGCTCT....GCACGCGTGGGTTCGAATCCCAC.CCTCGTCG chr7.trna5-SerGCT Sc: 83.08  
GATGAGGTGGCCGAGTGGTtA.AGGCGATGGACTGCTAATCCATTGTGCTCT....GCACGCGTGGGTTCGAATCCCAC.TCTCATCG chr7.trna13-SerGCT Sc: 82.89  



Sup tRNAs






Thr tRNAs


>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GGCGCCGTGGCTTAGTTGGTtA.AAGCGCCTGTCTAGTAAACAGGAG...........AtCCTGGGTTCGAATCCCAGCGGTGCCT chr11.trna3-ThrAGT Sc: 84.06  
GGCGCCGTGGCTTAGCTGGTtA.AAGCGCCTGTCTAGTAAACAGGAG...........AtCCTGGGTTCGAATCCCAGCGGTGCCT chr1.trna39-ThrAGT Sc: 81.60  
GGCACCATGGCTTAGCTGGTtA.AAGCGCCTGTCTAGTAAACAGGAG...........AtCCTGGGTTCAACTCCCAGTGGTGCCT chr7.trna7-ThrAGT Sc: 78.50  
GGCTCCATAGCTCAGG.GGTtA.GAGCACTGGTCTAGTAAACCAGGG...........GtCGTGAGTTCAAATCTCACTGGAGCCT chr17.trna1-ThrAGT Sc: 78.46  


>>>>>>>..>>>............<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GGCGCGGTGGCCAAGT.GGT.A.AGGCGTCGGTCTCGTAAACCGAAG...........AtCACGGGTTCGAACCCCGTCCGTGCCT chr14.trna1-ThrCGT Sc: 80.42  
GGCGCGGTGGCCAAGT.GGT.A.AGGCGTCGGTCTCGTAAACCGAAG...........AtCGCGGGTTCGAACCCCGTCCGTGCCT chr18.trna5-ThrCGT Sc: 79.77  

>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GGCTCCATAGCTCAGT.GGTtA.GAGCACTGGTCTTGTAAACCAGGG...........GtCGCGAGTTCGATCCTCGCTGGGGCCT chr5.trna9-ThrTGT Sc: 83.03  
GGCTCCATAGCTCAGT.GGTtA.GAGCACTGGTCTTGTAAACCAGGG...........GtCGCGAGTTCGATCCTCGCTGGGGCCT chr3.trna21-ThrTGT Sc: 83.03  
GGCTCCATAGCTCAGG.GGTtA.GAGCACTGGTCTTGTAAACCAGGG...........GtCGCGAGTTCAAATCTCGCTGGGGCCT chr16.trna12-ThrTGT Sc: 79.46  
GGCTCCATAGCTCAGG.GGTcA.GAGCACTGGTCTTGTAAACCAGGG...........GtCGTGAGTTCAAGTCTCACTGGGGCCT chr16.trna15-ThrTGT Sc: 74.22  



Trp tRNAs


>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GACCTCGTGGCGCAATGGTA.GCGCGTCTGACTCCAGATCAGAAG...........GcTGTGTGTTCAAATCACACCGGGGTCA chr3.trna11-TrpCCA Sc: 73.64  
GACCTCGTGGCGCAATGGTA.GCGCGTCTGACTCCAGATCAGAAG...........GcTGTGTGTTCAAATCACACCGGGGTCA chr3.trna10-TrpCCA Sc: 73.64  
GACCTCGTGGCGCAAGGGTA.GCGCGTCTGACTCCAGATCAGAAG...........GtTATGTGTTCAAATCACATCGGGGTCA chr3.trna9-TrpCCA Sc: 72.16  
GACCTCGTGGCGCAAGGGTA.GCGCGTCTGACTCCAGATCAGAAG...........GtTATGTGTTCAAATCACATCGGGGTCA chr3.trna12-TrpCCA Sc: 72.16  
GACCTCGTGGCGCAACGGTA.GCGCGTCTGACTCCAGATCAGAAG...........GcTGCGTGTTCGAATCACGTCGGGGTCA chr26.trna2-TrpCCA Sc: 71.65  
GACCTCGTGGCGCAACGGTA.GCGCGTCTGACTCCAGATCAGAAG...........GcTGCGTGTTCGAATCACGTCGGGGTCA chr1.trna4-TrpCCA Sc: 71.65  



Tyr tRNAs



>>>>>>>..>>>>........<<<<.>>>>>........................<<<<<................>>>>>.......<<<<<<<<<<<<.
CCTTCGATAGCTCAGCTGGTAGAGCGGAGGACTGTAGgctgactgtagaaagaaATCCTTAG...........GtCGCTGGTTCAATTCCGGCTCGAAGGA chr2.trna45-TyrGTA Sc: 73.87  
CCTTCGATAGCTCAGCTGGTAGAGCGGAGGACTGTAGtggctgtccctgcgggaATCCTTAG...........GtCGCTGGTTCGATTCCGGCTCGAAGGA chr2.trna12-TyrGTA Sc: 71.86  
CCTTCGATAGCTCAGCTGGTAGAGCGGAGGACTGTAGtggcgctccctgcgggaATCCTTAG...........GtCGCTGGTTCGATTCCGGCTCGAAGGA chr2.trna33-TyrGTA Sc: 71.23  
CCTTCGATAGCTCAGCTGGTAGAGCGGAGGACTGTAGaggcgccgcccgcgggaATCCTTAG...........GtCGCTGGTTCGATTCCGGCTCGAAGGA chr2.trna29-TyrGTA Sc: 70.24  
CCTTCGATAGCTCAGTTGGTAGAGTGGAGGACTGTAGgctcccttgcacggct.ATCCTTAG...........GtCGCTGGTTCAACTCCGGCTCGAAGGA chrUn_random.trna9-TyrGTA Sc: 68.51  
CCTTCGATAGCTCAGCTGGTAGAGCGGAGGACTGTAGgctctcttgcatggcc.ATCCTTAG...........GtCGCTGGTTCAACTCCGGCTCGAAGGA chr2.trna34-TyrGTA Sc: 68.16  



Val tRNAs


>>>>>>>..>>>...........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GTTTCCGTAGTGTAGTGGTtA.TCACGTTCGCCTAACACGCGAAAG...........GtCCCCGGTTCGAAACCGGGCGGAAACA chr1.trna26-ValAAC Sc: 86.79  
GTTTCCGTAGTGTAGTGGTtA.TCACGTTCGCCTAACACGCGAAAG...........GtCCCTGGTTCGAAACCAGGCGGAAACA chr1.trna33-ValAAC Sc: 86.73  
GTTTCCGTAGTGTAGTGGTtA.TCACGTTCGCCTAACACGCGAAAG...........GtCCCTGGTTCGAAACCAGGCGGAAACA chr1.trna32-ValAAC Sc: 86.73  
GTTTCTGTAGTGTAGTGGTtA.TCACGTTCGCCTAACACGCGAAAG...........GtCCCCGGTTCGAAACCGGGCAGAAACA chr16.trna14-ValAAC Sc: 85.53  
GTTTCTGTAGTGTAGTGGTcA.TCACATTCGCCTAACACGCGAAAG...........GtCCCTGGTTCGAAACCAGGCAGAAACA chr2.trna6-ValAAC Sc: 81.67  
GTTTCTGTAGTGTAGTGGTcA.TCACATTCGCCTAACACGCGAAAG...........GtCCCTGGTTCGAAACCAGGCAGAAACA chr2.trna42-ValAAC Sc: 81.67  
>>>>>>>..>>>...........<<<.>.>>>.......<<<.<................>>>>>.......<<<<<<<<<<<<.
GTTTCCGTAGTGTAGTGGTtA.TCACGTCCGCCTAACACGCGAAAG...........GtCCCCGGTTCGAAACCGGGCGGAAACA chr9.trna2-ValAAC Sc: 80.27  

>>>>>>>..>>>...........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GTTTCTGTAGTGTAGTGGTtA.TCACGTTCGCCTGACACGCGGAAG...........GtCCCTGGTTCAAAACCAGGCAGAAACA chr7.trna11-ValGAC Sc: 80.96  

>>>>>>>..>>>...........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GTTTCTGTAGTGTAGTGGTtA.TCACGTTCGCCTCACACGCGAAAG...........GtCCCCGGTTCGAAACCGGGCAGAAACA chr16.trna7-ValCAC Sc: 86.14  
GTTTCTGTAGTGTAGTGGTtA.TCACGTTCGCCTCACACGCGAAAG...........GtCCCCGGTTCGAAACCGGGCAGAAACA chr16.trna19-ValCAC Sc: 86.14  
GTTTCCGTAGTGTAGCGGTtA.TCACGTTCGCCTCACACGCGAAAG...........GtCCCCGGTTCGATCCCGGGCGGAAACA chr28.trna2-ValCAC Sc: 85.92  
GTTTCCATAGTGTAGCGGTtA.TCACGTTTGCCTCACACGCAAAAG...........GtCCCTGGTTCGATCCCAGGTGGAAACA chr2.trna7-ValCAC Sc: 85.26  
GTTTCTGTAGTGTAGCGGTtA.TCACGTTCGCCTCACACGCGAAAG...........GtCCCCGGTTCAATCCCGGGCAGAAACA chr1.trna7-ValCAC Sc: 82.92  

>>>>>>>..>>>...........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.
GGTTCCATAGTGTAGTGGTtA.TCACGTCTGCTTTACACGCAGAAG...........GtCCTGGGTTCGAGCCCCAGTGGAACCA chr1.trna21-ValTAC Sc: 85.12  
GGTTCCATAGTGTAGTGGTtA.TCACATCTGCTTTACACGCAGAAG...........GtCCTGAGTTCGATCCTCAGTGGAACCA chr2.trna22-ValTAC Sc: 81.76  
GGTTCCATAGTGTAGTGGTtA.TCACGTCTGCTTTACACGTAGAAG...........GtCCTGGGTTCGAGCCCCAGTGGAACCA chr1.trna20-ValTAC Sc: 80.54
The Genomic tRNA Database is curated by Todd Lowe and Patricia Chan. Please email lowe@soe.ucsc.edu with any questions and comments. To submit corrections, please use our Bug and Request Tracking System.