tRNAscan-SE Analysis of the Geobacillus kaustophilus HTA426 Genome

[Main Overview] [Secondary Structures]	[Analysis Notes]
[tRNAs by Isotype] [tRNAs by Locus]	[Run Options/Stats]
[tRNA Alignments][FASTA Seqs]	[Genome DB] [Genome Seq]

[BLAST] [Download] [Bugs/Requests] [Citation] [Legend]

[GtRNAdb Home] [tRNAscan-SE Server] [Lowe Lab] [Other Links]

Structurally Aligned tRNAs (by Isotype & Anticodon)

[Ala] [Arg] [Asn] [Asp] [Cys] [Gln] [Glu] [Gly] [His] [Ile] [Leu] [Lys] [Met] [Phe] [Pro] [Ser] [Thr] [Trp] [Tyr] [Val]
[Suppressor] [Selenocysteine]



Ala tRNAs



>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<....
GGGGCATTAGCTCAGTTGGGA.GAGCGTCGTGCTGGCAGCGCGAAG...........GtCACCGGTTCGAGCCCGGT.ATGCTCCA... chr.trna60-AlaGGC Sc: 73.41  
GGGGCGTTAGTTCAGG.GGGA.GAACGCTTCGCTGGCAGCGAAGAG...........GtCAGGGGTTCAAATCCCCT.ACGCTCCA... chr.trna82-AlaGGC Sc: 71.62  

>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<....
GGGGCCTTAGCTCAGCTGGGA.GAGCGCCTGCCCCGCACGCAGGAG...........GtCATCGGTTCGAATCCGAT.AGGCTCCA... chr.trna57-AlaCGC Sc: 79.60  

>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<....
GGGGCCTTAGCTCAGCTGGGA.GAGCGCCTGCTTTGCAAGCAGGAG...........GtCATCGGTTCGATCCCGAT.AGGCTCCACCA chr.trna2-AlaTGC Sc: 93.97  
GGGGCCTTAGCTCAGCTGGGA.GAGCGCCTGCTTTGCAAGCAGGAG...........GtCATCGGTTCGATCCCGAT.AGGCTCCACCT chr.trna43-AlaTGC Sc: 86.29  
GGGGCCTTAGCTCAGCTGGGA.GAGCGCCTGCTTTGCACGCAGGAG...........GtCATCGGTTCGATCCCGAT.AGGCTCCATCA chr.trna21-AlaTGC Sc: 84.52  
GGGGCCTTAGCTCAGCTGGGA.GAGCGCCTGCTTTGCACGCAGGAG...........GtCATCGGTTCGATCCCGAT.AGGCTCCA... chr.trna14-AlaTGC Sc: 83.90  
>>>>>>>..>>>>.........<<<<..>>>>.......<<<<.................>>>>>.......<<<<<.<<<<<<<....
GGGGCCTTAGCTCAACTGGGA.GAGCGCCTGCTTTGCAAGCAGAG............GtCATCGGTTCGATCCCGAT.AGGCTCCACCA chr.trna4-AlaTGC Sc: 82.44  



Arg tRNAs


>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<....
GCGCTCGTAGCTCAATTGGAtA.GAGCATCTGACTACGGATCAGAAG...........GtTAGGGGTTCGAATCCTCTCGAGCGCGCCA chr.trna30-ArgACG Sc: 83.65  
GCGCTCGTAGCTCAATTGGAtA.GAGCATCTGACTACGGATCAGAAG...........GtTAGGGGTTCGAATCCTCTCGAGCGCG... chr.trna77-ArgACG Sc: 75.36  
GCGCTCGTAGCTCAATTGGAtA.GAGCATCTGACTACGGATCAGAAG...........GtTAGGGGTTCGAATCCTCTCGAGCGCG... chr.trna41-ArgACG Sc: 75.36  
GCGCTCGTAGCTCAATTGGAtA.GAGCATCTGACTACGGATCAGAAG...........GtTAGGGGTTCGAATCCTCTCGAGCGCG... chr.trna12-ArgACG Sc: 75.36  


>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<....
GCCCTCGTAGTGTAGT.GGAtA.GCACGAGAGATTCCGGTTCTCTTA...........G.CGTGGGTTCGAATCCTGCCGAGGGCG... chr.trna61-ArgCCG Sc: 56.50  


>>>>>>>..>>>>..........<<<<..>>>>.......<<<<.................>>>>>.......<<<<<<<<<<<<....
GGCCCCGTAGCTCAGT.GGAtA.GAGCGTCGGTTTCCTAAACCGTGC...........GtCGGAGGTTCGAATCCTCTCGGGGCCGCTA chr.trna55-ArgCCT Sc: 75.27  

>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<....
GTCCCAGTAGCTCAGTAGGAtA.GAGCAGCGGCCTTCTAAGCCGTCG...........GtCGGGAGTTCGAGTCTCTCCTGGGACGCCA chr.trna79-ArgTCT Sc: 86.86  



Asn tRNAs



>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<....
TCCGCAGTAGCTCAGTGGTA.GAGCAATCGGCTGTTAACCGATTG...........GtCGCAGGTTCGAATCCTGCCTGCGGAGCCA chr.trna62-AsnGTT Sc: 93.98  
TCCGCAATAGCTCAGCGGTA.GAGCAACCGGCTGTTAACCGGTAG...........GtCGTAGGTTCGAATCCTACTTGCGGAGCCA chr.trna51-AsnGTT Sc: 92.72  
TCCGCAATAGCTCAGCGGTA.GAGCAACCGGCTGTTAACCGGTAG...........GtCGTAGGTTCGAATCCTACTTGCGGAGCCA chr.trna22-AsnGTT Sc: 92.72  
TCCGCAATAGCTCAGCGGTA.GAGCAACCGGCTGTTAACCGGTAG...........GtCGTAGGTTCGAATCCTACTTGCGGAGCCA chr.trna15-AsnGTT Sc: 92.72  



Asp tRNAs



>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<....
GGTCCCGTAGTGTAGTGGTtA.ACATGCCTGCCTGTCACGCAGGAG...........AtCGCGGGTTCGAGTCCCGTCGGGACCGCCA chr.trna67-AspGTC Sc: 83.67  
GGTCCCGTAGTGTAGTGGTtA.ACATGCCTGCCTGTCACGCAGGAG...........AtCGCGGGTTCGAGTCCCGTCGGGACCGCCA chr.trna35-AspGTC Sc: 83.67  
GGTCCCGTAGTGTAGTGGTtA.ACATGCCTGCCTGTCACGCAGGAG...........AtCGCGGGTTCGAGTCCCGTCGGGACCGCCA chr.trna25-AspGTC Sc: 83.67  



Cys tRNAs



>>>>>>>..>>>..........<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<.<<<<<<<....
GGCGGCATAGCCAAGTGGTA.AGGCAGAGGTCTGCAAAACCTTT...........AtCCCCGGTTCGAATCCGGG.TGCCGCCTCCA chr.trna74-CysGCA Sc: 79.21  



Gln tRNAs



>>>>>>>..>>>..........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<....
TGGGCTATAGCCAAGCGGTA.AGGCAACGGACTTTGACTCCGTGA...........TgCGCTGGTTCGAATCCAGCTAGCCCAGCCA chr.trna18-GlnTTG Sc: 78.95  
TGGGCCATAGCCAAGCGGTA.AGGCAACGGACTTTGACTCCGTGA...........TgCGCTGGTTCGAATCCAGCTGGCCCAGCCA chr.trna26-GlnTTG Sc: 78.84  
TGGGGTATAGCCAAGCGGTA.AGGCAACGGACTTTGACTCCGTGA...........TgCGTTGGTTCGAATCCAGCTACCCCAGCCA chr.trna72-GlnTTG Sc: 76.27  
TGGGCTATAGCCAAGCGGCA.AGGCAACGGACTTTGACTCCGTGA...........TgCGCTGGTTCGAATCCAGCTAGCCCAG... chr.trna80-GlnTTG Sc: 68.77  



Glu tRNAs



>>>>>>>..>>>...........<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<....
GGCCCGTTGGTCAAGTGGTtA.AGACACCGCCCTTTCACGGCGGTA...........ACACGGGTTCGAATCCCGTACGGGTCA... chr.trna64-GluTTC Sc: 71.01  
GGCCCGTTGGTCAAGTGGTtA.AGACACCGCCCTTTCACGGCGGTA...........ACACGGGTTCGAATCCCGTACGGGTCA... chr.trna6-GluTTC Sc: 71.01  
GGCCCGTTGGTCAAGTGGTtA.AGACACCGCCCTTTCACGGCGGTA...........ACACGGGTTCGAATCCCGTACGGGTCA... chr.trna53-GluTTC Sc: 71.01  
GGCCCGTTGGTCAAGTGGTtA.AGACACCGCCCTTTCACGGCGGTA...........ACACGGGTTCGAATCCCGTACGGGTCA... chr.trna24-GluTTC Sc: 71.01  
GGCCCGTTGGTCAAGTGGTtA.AGACACCGCCCTTTCACGGCGGTA...........ACACGGGTTCGAATCCCGTACGGGTCA... chr.trna17-GluTTC Sc: 71.01  



Gly tRNAs



>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<....
GCGGAAGTAGTTCAGCGGTA.GAACACCACCTTGCCAAGGTGGGG...........GtCGCGGGTTCGAGTCCCGT.CTTCCGCTCCA chr.trna10-GlyGCC Sc: 94.07  
GCGGAAGTAGTTCAGCGGTA.GAACACCACCTTGCCAAGGTGGGG...........GtCGCGGGTTCGAGCCCCGT.CTTCCGCTCCA chr.trna39-GlyGCC Sc: 91.70  
GCGGAAGTAGTTCAGTGGTA.GAACACCACCTTGCCAAGGTGGGG...........GtCGCGGGTTCGAGTCCCGT.CTTCCGCT... chr.trna76-GlyGCC Sc: 86.63  
GCGGAAGTAGTTCAGTGGTA.GAACACCACCTTGCCAAGGTGGGG...........GtCGCGGGTTCGAGTCCCGT.CTTCCGCT... chr.trna20-GlyGCC Sc: 86.63  
GCGGAAGTAGTTCAGCGGTA.GAACACCACCTTGCCAAGGTGGGG...........GtCGCGGGTTCGAGTCCCGT.CTTCCGCT... chr.trna73-GlyGCC Sc: 85.78  

>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<....
GCGGGTGTAGTTTAATGGTA.AAACCTCAGCTTCCCAAGCTGAA............GtCGTGGGTTCGATTCCCAT.CACCCGCT... chr.trna78-GlyCCC Sc: 70.24  

>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<....
GCGGGTGTAGTTTAGTGGTA.AAACCTCAGCCTTCCAAGCTGAT............GtCGTGGGTTCGATTCCCAT.CACCCGCTCCA chr.trna32-GlyTCC Sc: 81.36  
GCGGGTGTAGTTTAGTGGTA.AAACCTCAGCCTTCCAAGCTGAT............GtCGTGGGTTCGATTCCCAT.CACCCGCT... chr.trna49-GlyTCC Sc: 73.06  



His tRNAs



>>>>>>>..>>>...........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<....
GCGACTATGGCGAAGTGGTtA.ACGCACCAGATTGTGGCTCTGGCA...........TgCGTGGGTTCGATTCCCACTAGTCGCC... chr.trna71-HisGTG Sc: 65.72  
GCGACTATGGCGAAGTGGTtA.ACGCACCAGATTGTGGCTCTGGCA...........TgCGTGGGTTCGATTCCCACTAGTCGCC... chr.trna48-HisGTG Sc: 65.72  



Ile tRNAs



>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<....
GGGCCTATAGCTCAGCTGGTt.AGAGCGCACGCCTGATAAGCGTGAG...........GtCGGTGGTTCAAGTCCACTTAGGCCCATCA chr.trna87-IleGAT Sc: 92.80  
GGGCCTATAGCTCAGCTGGTc.AGAGCGCACGCCTGATAAGCGTGAG...........GtCGGTGGTTCAAGTCCACTTAGGCCCA... chr.trna50-IleGAT Sc: 89.49  
GGGCCTATAGCTCAGCTGGTc.AGAGCGCACGCCTGATAAGCGTGAG...........GtCGGTGGTTCAAGTCCACTTAGGCCCA... chr.trna1-IleGAT Sc: 89.49  
>>>.>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<.<<<....
GGGCCTATAGCTCAGCTGGTcaAGAGCGCACGCCTGATAAGCGTGAG...........GtCGGTGGTTCAAGTCCACTTAG.CCCA... chr.trna3-IleGAT Sc: 74.10  




Leu tRNAs



>>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>............<<<<..>>>>>.......<<<<<.<<<<<<<....
GCGGTCGTGGCGGAAT.GGCaG.ACGCGCTAGGTTGAGGGCCTAGT.GGGG..GCAA......CCCCGTGGAGGTTCAAGTCCTCT.CGACCGCA... chr.trna83-LeuGAG Sc: 58.09  
>>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>.>........<.<<<<..>>>>>.......<<<<<.<<<<<<<....
GCGGTCGTGGCGGAAT.GGCaG.ACGCGCTAGGTTGAGGGCCTAGT.GGGGGC........GACCCCGTGGAGGTTCAAGTCCTCT.CGACCGCA... chr.trna29-LeuGAG Sc: 55.38  

>>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>............<<<<..>>>>>.......<<<<<.<<<<<<<....
GCGGGTGTGGCGGAATTGGCaG.ACGCGCTAGATTCAGGGTCTAGT.GCCCT.TTA......CGGGCGTGGGGGTTCGAGTCCCTT.CACCCGCA... chr.trna9-LeuCAG Sc: 64.20  

>>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>..............<<<..>>>>>.......<<<<<.<<<<<<<....
GCGGGTGTGGCGGAATTGGCaG.ACGCACCAGACTTAGGATCTGGC.GCC...TCAC.......GGCGTGGGGGTTCAAGTCCCTC.CACCCGCA... chr.trna28-LeuTAG Sc: 72.77  

>>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>..>........<..<<<..>>>>>.......<<<<<.<<<<<<<....
GCCGATGTGGCGGAATTGGCaG.ACGCGCACGACTCAAAATCGTGTGGGGTAG........CCCCCCGTGTGGGTTCGACTCCCAC.CATCGGCA... chr.trna75-LeuCAA Sc: 70.30  

>>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>>..........<<<<<..>>>>>.......<<<<<.<<<<<<<....
GCCGGGGTGGCGGAATTGGCaG.ACGCACAGGACTTAAAATCCTGG.GGTAG.GTAA.....CTACCGTGCCGGTTCGAGTCCGGC.CCTCGGCA... chr.trna40-LeuTAA Sc: 75.22  
GCCGGGGTGGCGGAATTGGCaG.ACGCACAGGACTTAAAATCCTGG.GGTAG.GTCA.....CTACCGTGCCGGTTCGAGTCCGGC.CCTCGGCA... chr.trna11-LeuTAA Sc: 73.30  



Lys tRNAs



>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<....
GAGCCATTAGCTCAGTAGGTAGAGCATCTGACTTTTAATCAGAGG...........GtCGGAGGTTCGAGTCCTCCATGGCTCACCA chr.trna8-LysTTT Sc: 95.56  
GAGCCATTAGCTCAGTAGGTAGAGCATCTGACTTTTAATCAGAGG...........GtCGGAGGTTCGAGTCCTCCATGGCTCACCA chr.trna27-LysTTT Sc: 95.56  
GAGCCATTAGCTCAGTAGGTAGAGCATCTGACTTTTAATCAGAGG...........GtCGGAGGTTCGAGTCCTCCATGGCTCACCA chr.trna19-LysTTT Sc: 95.56  
GAGCCATTAGCTCAGTAGGTAGAGCATCTGACTTTTAATCAGAGG...........GtCGGAGGTTCGAGTCCTCCATGGCTCA... chr.trna38-LysTTT Sc: 87.26  



Met tRNAs


>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<....
GGACCTTTAGCTCAGCT.GGTtAGAGCAGACGGCTCATAACCGTCCG...........GtCGTAGGTTCGAGTCCTACAAGGTCCACCA chr.trna45-MetCAT Sc: 96.69  
GGCGGTGTAGCTCAGCT.GGCtAGAGCGTACGGTTCATACCCGTGAG...........GtCGGGGGTTCGATCCCCTCCACCGCCACCA chr.trna5-MetCAT Sc: 89.90  
GGCGGTGTAGCTCAGCT.GGCtAGAGCGTACGGTTCATACCCGTGAG...........GtCGGGGGTTCGATCCCCTCCACCGCCACCA chr.trna44-MetCAT Sc: 89.90  
.>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<.....
CGCGGGGTGGAGCAGTCcGGT.AGCTCGTCGGGCTCATAACCCGAAG...........GtCGCAGGTTCAAATCCTGCCCCCGCAACCA chr.trna66-MetCAT Sc: 88.07  
CGCGGGGTGGAGCAGTCcGGT.AGCTCGTCGGGCTCATAACCCGAAG...........GtCGCAGGTTCAAATCCTGCCCCCGCAACCA chr.trna34-MetCAT Sc: 88.07  



Phe tRNAs



>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<....
GGCTCGGTAGCTCAGTCGGTAGAGCAAAGGACTGAAAATCCTTGT...........GtCGGCGGTTCGATTCCGTCCCGAGCCACCA chr.trna36-PheGAA Sc: 94.05  



Pro tRNAs



>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<....
CGGGATGTAGCTCAGCTtGGTAGAGCACACGCATGGGGTGCGTGGG...........GtCGCAGGTTCAAATCCTGTCATCCCGA... chr.trna59-ProGGG Sc: 78.93  

>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<....
CGGGAAGTAGCTCAGCTtGGTAGAGCACACGGTTCGGGTCCGTGAG...........GtCGCAGGTTCAAATCCTGTCTTCCCGACCA chr.trna56-ProCGG Sc: 90.08  
CGGGAAGTAGCTCAGCTtGGTAGAGCACACGGTTCGGGTCCGTGAG...........GtCGCAGGTTCAAATCCTGTCTTCCCGA... chr.trna42-ProCGG Sc: 81.78  

>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<....
CGGGAAGTAGCTCAGCTtGGTAGAGCACATGGTTTGGGACCATGGG...........GtCGCAGGTTCAAATCCTGTCTTCCCGA... chr.trna31-ProTGG Sc: 85.30  
CGGGAAGTAGCTCAGTTtGGCAGAGCACATGGTTTGGGACCATGGG...........GtCGCAGGTTCAAATCCTGTCTTCCCGA... chr.trna13-ProTGG Sc: 84.26  



SeC tRNAs





Ser tRNAs



>>>>>>>..>>>..............<<<.>>>>>.......<<<<<..>>>>>.........<<<<<..>>.>>.......<<.<<.<<<<<<<....
GGAGAGCTGTCCGAGT..GGTcgA.AGGAGCACGATTGGAAATCGTGTAGGCGT..GAATa..GCGCCTCAA.GGTTCGAATCCCTT.GCTCTCCGCCA chr.trna63-SerGGA Sc: 53.07  

>>>>>>>..>>>..............<<<.>>>>>.......<<<<<..>>>.>>.......<<.<<<..>>>>>.......<<<<<.<<<<<<<....
GGAGGAGTACCCAAGTCtGGCtgA.AGGGGTCGGTTTCGAAAACCGATAGGGGTG.TCA...CAGCCCGCGGGGGTTCGAATCCCTC.CTCCTCCGCCA chr.trna84-SerCGA Sc: 71.04  
GGAGGAATACCCAAGTCtGGCtgA.AGGGGGCGGTTTCGAAAACCGCTAGGGGTG.TCA...CAGCCCGCGGGGGTTCGAATCCCTC.TTCCTCCA... chr.trna58-SerCGA Sc: 62.14  

>>>>>>>..>>>..............<<<.>>>>>.......<<<<<...>>>>>.......<<<<<...>>>>>.......<<<<<.<<<<<<<....
GGAGGAGTACCCAAGT..GGTtgA.AGGGGTCGGTCTTGAAAACCGAGAGGCGCC.GCAA..GGCGCG.CGGGGGTTCGAATCCCTC.CTCCTCCGCCA chr.trna46-SerTGA Sc: 77.73  


>>>>>>>..>>>..............<<<.>>>>>.......<<<<<...>>>>>>.....<<<<<<...>>>>>.......<<<<<.<<<<<<<....
GGAGAAGTACCCAAGT..GGCtgA.AGGGGACGGTTTGCTAAACCGTTAGGTCGCAGTT.tTGCGGCG.CGCGGGTTCAAATCCCGC.CTTCTCCGCCA chr.trna52-SerGCT Sc: 72.19  
.>>>>>...>>>..............<<<.>>>>>.......<<<<<...>>>>>>.....<<<<<<...>>>>>.......<<<<<..<<<<<.....
.GAGAAGTACCCAAGT..GGCtgA.AGGGGACGGTTTGCTAAACCGTTAGGTCGTGGCT.tTACGGCG.CGCGGGTTCAAATCCCGC.ATTCTCCGCCA chr.trna23-SerGCT Sc: 52.39  



Sup tRNAs






Thr tRNAs



>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<....
GCTTCCATAGCTCAGTAGGTAGAGCACTTCCATGGTAAGGAAGAG...........GtCACCGGTTCGAGCCCGGTTGGAAGCTCCA chr.trna16-ThrGGT Sc: 85.24  

>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<....
GCCGACTTAGCTCAATTGGTAGAGCAACTGAATCGTAATCAGTAG...........GtTGCGGGTTCAAGTCCTGCAGTCGGCACCA chr.trna68-ThrCGT Sc: 91.13  
GCCGACTTAGCTCAATTGGTAGAGCAACTGAATCGTAATCAGTAG...........GtTGCGGGTTCGAGTCCTGCAGTCGGCATCA chr.trna85-ThrCGT Sc: 84.57  

>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<....
GCCGGCTTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAG...........GtTGCGGGTTCAAGTCCTGCAGCCGGCACCA chr.trna47-ThrTGT Sc: 97.52  
GCCGGCTTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAG...........GtTGCGGGTTCAAGTCCTGCAGCCGGCA... chr.trna37-ThrTGT Sc: 89.22  



Trp tRNAs


>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<....
AGGGGCATAGTTTAATGGTA.GAACAGAGGTCTCCAAAACCTCCG...........GTGTGGGTTCGATTCCTACTGCCCCTGCCA chr.trna70-TrpCCA Sc: 71.86  



Tyr tRNAs



>>>>>>>..>>>............<<<.>>>>>.......<<<<<.>>>........<<<...>>>>>.......<<<<<.<<<<<<<....
GGAGGGGTAGCGAAGTGGCtaA.ACGCGGCGGACTGTAAATCCGCTCCCTTT.....GGGTtCGGCGGTTCGAATCCGTC.CCCCTCCACCA chr.trna69-TyrGTA Sc: 80.04  
GGAGGGGTAGCGAAGTGGCtaA.ACGCGGCGGACTGTAAATCCGCTCCCTTT.....GGGTtCGGCGGTTCGAATCCGTC.CCCCTCCA... chr.trna86-TyrGTA Sc: 71.74  



Val tRNAs



>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<....
GGAGTATTAGCTCAGC.GGGA.GAGCACCACGTTGACAGCGTGGGG...........GtCACTGGTTCGATCCCAGTATACTCCACCA chr.trna81-ValGAC Sc: 80.25  
GACCTGTTAGCTCAGT.GGGA.GAGCACTTCCTTGACAGGGAAGGG...........GtCGGGGGTTCAAGTCCCTCACAGGTCATCA chr.trna54-ValGAC Sc: 72.66  


>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<....
GGAGGATTAGCTCAGCTGGGA.GAGCACTTGCCTTACAAGCAAGGG...........GtCGGCGGTTCGATCCCGTCATCCTCCACCA chr.trna7-ValTAC Sc: 95.72  
GGAGGATTAGCTCAGCTGGGA.GAGCACTTGCCTTACAAGCAAGGG...........GtCGGCGGTTCGATCCCGTCATCCTCCACCA chr.trna65-ValTAC Sc: 95.72  
GGAGGATTAGCTCAGCTGGGA.GAGCACTTGCCTTACAAGCAAGGG...........GtCGGCGGTTCGATCCCGTCATCCTCCACCA chr.trna33-ValTAC Sc: 95.72

The Genomic tRNA Database is curated by Todd Lowe and Patricia Chan. Please email lowe@soe.ucsc.edu with any questions and comments. To submit corrections, please use our Bug and Request Tracking System.