tRNAscan-SE Analysis of the Escherichia coli CFT073 Genome


[Main Overview] [Secondary Structures] [Analysis Notes]
[tRNAs by Isotype] [tRNAs by Locus]       [Run Options/Stats]
[tRNA Alignments][FASTA Seqs] [Genome DB] [Genome Seq]
[BLAST] [Download] [Bugs/Requests] [Citation] [Legend]
[GtRNAdb Home] [tRNAscan-SE Server] [Lowe Lab] [Other Links]

Structurally Aligned tRNAs (by Isotype & Anticodon)
[Ala] [Arg] [Asn] [Asp] [Cys] [Gln] [Glu] [Gly] [His] [Ile] [Leu] [Lys] [Met] [Phe] [Pro] [Ser] [Thr] [Trp] [Tyr] [Val]
[Suppressor] [Selenocysteine]


Ala tRNAs

>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCTATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAG...........GtCAGCGGTTCGATCCCGCTTAGCTCCACCA chr.trna71-AlaGGC Sc: 86.51 GGGGCTATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAG...........GtCAGCGGTTCGATCCCGCTTAGCTCCACCA chr.trna70-AlaGGC Sc: 86.51 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAG...........GtCTGCGGTTCGATCCCGCATAGCTCCACCA chr.trna43-AlaTGC Sc: 88.77 .>>>>.>..>.>>........<<.<.>>>>>.......<<<<<................>>>>>.......<<<<<<.<<<<..... TGAGTGAAAG.TCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAG...........GtCTGCGGTTCGATCCCGCATAGCTCCACCA chr.trna2-AlaTGC Sc: 50.74

Arg tRNAs

>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<.... GCATCCGTAGCTCAGCTGGAt.A.GAGTACTCGGCTACGAACCGAGCG...........GtCGGAGGTTCGAATCCTCC.CGGATGCACCA chr.trna68-ArgACG Sc: 87.22 GCATCCGTAGCTCAGCTGGAt.A.GAGTACTCGGCTACGAACCGAGCG...........GtCGGAGGTTCGAATCCTCC.CGGATGCACCA chr.trna67-ArgACG Sc: 87.22 GCATCCGTAGCTCAGCTGGAt.A.GAGTACTCGGCTACGAACCGAGCG...........GtCGGAGGTTCGAATCCTCC.CGGATGCACCA chr.trna66-ArgACG Sc: 87.22 GCATCCGTAGCTCAGCTGGAt.A.GAGTACTCGGCTACGAACCGAGCG...........GtCGGAGGTTCGAATCCTCC.CGGATGCACCA chr.trna65-ArgACG Sc: 87.22 GCATCCGTAGCTCAGCTGGAt.A.GAGTACTCGGCTACGAACCGAGCG...........GtCGGAGGTTCGAATCCTCC.CGGATGCACCA chr.trna64-ArgACG Sc: 87.22 >>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<.................>>>>.......<<<<..<<<<<<<.... GCGCCCGTAGCTCAGCTGGAt.A.GAGCGCTGCCCTCCGGAGGCAGAG...........GtCTCAGGTTCGAATCCTGT.CGGGCGCGCCA chr.trna38-ArgCCG Sc: 89.49 >>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>.>.......<.<<<.<<<<<<<.... CCGCCATTAGCTCATCAGGAa.A.GAGCGCCAGCTTTCGAAGCTGGTT...........GcGCGGAGTTCGGGTCCCCG.ATGGTGGTCCA chr.trna17-ArgTCG Sc: 48.60 >>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<.... GTCCTCTTAGTTAAAT.GGAt.A.TAACGAGCCCCTCCTAAGGGCTA............AtTGCAGGTTCGATTCCTGC.AGGGGACACCA chr.trna24-ArgCCT Sc: 66.39 >>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<.... GCGCCCTTAGCTCAGTTGGAt.A.GAGCAACGACCTTCTAAGTCGTGG...........GcCGCAGGTTCGAATCCTGC.AGGGCGCGCCA chr.trna7-ArgTCT Sc: 89.39 >>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>.>>>.......<<<.<.<<<<<<<.... GCGTTGTTAGCTCAGCAGGAc.A.GAGCAATTGCCTTCTAAGCAATCG...........GtCAGTGGTTCGAATCCAGT.ACAACGCGCCA chr.trna18-ArgTCT Sc: 78.11 >>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<.... CCGCCACTGGCTCATC.GGGaaA.GAGCATCAGCCTTCTAAGTTGACT...........GtGCGAGGTTCGAGTCCTCG.GTGGCGGTCCA chr.trna15-ArgTCT Sc: 59.54

Asn tRNAs

>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... TCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTAT...........GtCACTGGTTCGAGTCCAGTCAGAGGAGCCA chr.trna73-AsnGTT Sc: 87.13 TCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTAT...........GtCACTGGTTCGAGTCCAGTCAGAGGAGCCA chr.trna72-AsnGTT Sc: 87.13 TCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTAT...........GtCACTGGTTCGAGTCCAGTCAGAGGAGCCA chr.trna22-AsnGTT Sc: 87.13 TCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTAT...........GtCACTGGTTCGAGTCCAGTCAGAGGAGCCA chr.trna21-AsnGTT Sc: 87.13

Asp tRNAs

>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGAGCGGTAGTTCAGTCGGTtAGAATACCTGCCTGTCACGCAGGGG...........GtCGCGGGTTCGAGTCCCGTCCGTTCCGCCA chr.trna4-AspGTC Sc: 90.74 GGAGCGGTAGTTCAGTCGGTtAGAATACCTGCCTGTCACGCAGGGG...........GtCGCGGGTTCGAGTCCCGTCCGTTCCGCCA chr.trna36-AspGTC Sc: 90.74 GGAGCGGTAGTTCAGTCGGTtAGAATACCTGCCTGTCACGCAGGGG...........GtCGCGGGTTCGAGTCCCGTCCGTTCCGCCA chr.trna3-AspGTC Sc: 90.74

Cys tRNAs

>>>>>>>..>>>..........<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GGCGCGTTAACAAAGCGGTT.ATGTAGCGGATTGCAAATCCGTCT...........AGTCCGGTTCGACTCCGGAACGCGCCTCCA chr.trna76-CysGCA Sc: 51.48

Gln tRNAs

>>>>>>>..>>>..........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... TGGGGTATCGCCAAGCGGTA.AGGCACCGGATTCTGATTCCGGCA...........TtCCGAGGTTCGAATCCTCGTACCCCAGCCA chr.trna89-GlnCTG Sc: 75.83 TGGGGTATCGCCAAGCGGTA.AGGCACCGGATTCTGATTCCGGCA...........TtCCGAGGTTCGAATCCTCGTACCCCAGCCA chr.trna88-GlnCTG Sc: 75.83 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... TGGGGTATCGCCAAGCGGTA.AGGCACCGGTTTTTGATACCGGCA...........TtCCCTGGTTCGAATCCAGGTACCCCAGCCA chr.trna86-GlnTTG Sc: 74.33 TGGGGTATCGCCAAGCGGTA.AGGCACCGGTTTTTGATACCGGCA...........TtCCCTGGTTCGAATCCAGGTACCCCAGCCA chr.trna85-GlnTTG Sc: 74.33

Glu tRNAs

>>>>>>>..>>>>..........<<<<.>>.>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GTCCCCTTCGTCTAGAGGCccA.GGACACC.GCCCTTTCACGGCGGTA...........ACAGGGGTTCGAATCCCCTAGGGGACGCCA chr.trna69-GluTTC Sc: 59.80 GTCCCCTTCGTCTAGAGGCccA.GGACACC.GCCCTTTCACGGCGGTA...........ACAGGGGTTCGAATCCCCTAGGGGACGCCA chr.trna59-GluTTC Sc: 59.80 GTCCCCTTCGTCTAGAGGCccA.GGACACC.GCCCTTTCACGGCGGTA...........ACAGGGGTTCGAATCCCCTAGGGGACGCCA chr.trna49-GluTTC Sc: 59.80 GTCCCCTTCGTCTAGAGGCccA.GGACACC.GCCCTTTCACGGCGGTA...........ACAGGGGTTCGAATCCCCTAGGGGACGCCA chr.trna44-GluTTC Sc: 59.80 GTCCCCTTCGTCTAGAGGCccA.GGACACC.GCCCTTTCACGGCGGTA...........ACAGGGGTTCGAATCCCCTAGGGGACGCCA chr.trna35-GluTTC Sc: 59.80 GTCCCCTTCGTCTAGAGGCccA.GGACACCtGCCCTTTCACGGCGGTA...........ACAGGGGTTCGAATCCCCTAGGGGACGCCA chr.trna1-GluTTC Sc: 49.26

Gly tRNAs

>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGGAATAGCTCAGTTGGT.A.GAGCACGACCTTGCCAAGGTCGGG...........GtCGCGAGTTCGAGTCTCGTTTCCCGCTCCA chr.trna75-GlyGCC Sc: 93.74 GCGGGAATAGCTCAGTTGGT.A.GAGCACGACCTTGCCAAGGTCGGG...........GtCGCGAGTTCGAGTCTCGTTTCCCGCTCCA chr.trna52-GlyGCC Sc: 93.74 GCGGGAATAGCTCAGTTGGT.A.GAGCACGACCTTGCCAAGGTCGGG...........GtCGCGAGTTCGAGTCTCGTTTCCCGCTCCA chr.trna51-GlyGCC Sc: 93.74 GCGGGAATAGCTCAGTTGGT.A.GAGCACGACCTTGCCAAGGTCGGG...........GtCGCGAGTTCGAGTCTCGTTTCCCGCTCCA chr.trna50-GlyGCC Sc: 93.74 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGGCGTAGTTCAAT.GGT.A.GAACGAGAGCTTCCCAAGCTCTAT...........A.CGAGGGTTCGATTCCCTTCGCCCGCTCCA chr.trna62-GlyCCC Sc: 78.75 >>>>>>>..>>>............<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGGCATCGTATAAT.GGCtA.TTACCTCAGCCTTCCAAGCTGATG...........A.TGCGGGTTCGATTCCCGCTGCCCGCTCCA chr.trna47-GlyTCC Sc: 64.85

His tRNAs

>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GTGGCTATAGCTCAGTTGGTAGAGCCCTGGATTGTGATTCCAGTT...........GtCGTGGGTTCGAATCCCATTAGCCACCCCA chr.trna39-HisGTG Sc: 84.86

Ile tRNAs

>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... AGGCTTGTAGCTCAGGTGGTtAGAGCGCACCCCTGATAAGGGTGAG...........GtCGGTGGTTCAAGTCCACTCAGGCCTACCA chr.trna42-IleGAT Sc: 88.37

Leu tRNAs

>>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>.>.........<.<<<...>>>>>.......<<<<<.<<<<<<<.... GCCGAGGTGGTGGAATTGGTaGACACGCTACCTTGAGGTGGTAGTGCCCAA.........TAGGGCtTACGGGTTCAAGTCCCGT.CCTCGGTACCA chr.trna60-LeuGAG Sc: 70.30 >>>>.>>..>>>...........<<<.>>>>>.......<<<<<..>>>>...........<<<<...>>>>>.......<<<<<.<<.<<<<.... GCGAAGGTGGCGGAATTGGTaGACGCGCTAGCTTCAGGTGTTAGT.GTCC.TTAC......GGACG.TGGGGGTTCAAGTCCCCC.CCCTCGCACCA chr.trna56-LeuCAG Sc: 69.07 GCGAAGGTGGCGGAATTGGTaGACGCGCTAGCTTCAGGTGTTAGT.GTCC.TTAC......GGACG.TGGGGGTTCAAGTCCCCC.CCCTCGCACCA chr.trna54-LeuCAG Sc: 69.07 GCGAAGGTGGCGGAATTGGTaGACGCGCTAGCTTCAGGTGTTAGT.GTCC.TTAC......GGACG.TGGGGGTTCAAGTCCCCC.CCCTCGCACCA chr.trna40-LeuCAG Sc: 69.07 GCGAAGGTGGCGGAATTGGTaGACGCGCTAGCTTCAGGTGTTAGT.GTTC.TTAC......GGACG.TGGGGGTTCAAGTCCCCC.CCCTCGCACCA chr.trna55-LeuCAG Sc: 66.59 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>.............<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGAGTGGCGAAATTGGTaGACGCACCAGATTTAGGTTCTGGC.GCC..GCAA.......GGTG.TGCGAGTTCAAGTCTCGC.CTCCCGCACCA chr.trna84-LeuTAG Sc: 78.30 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>.............<<<...>>>>>.......<<<<<.<<<<<<<.... GCCGAAGTGGCGAAATCGGTaGACGCAGTTGATTCAAAATCAACC.GTA..GAAA.......TACG.TGCCGGTTCGAGTCCGGC.CTTCGGCACCA chr.trna53-LeuCAA Sc: 79.12 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>>...........<<<<...>>>>>.......<<<<<.<<<<<<<.... GCCCGGATGGTGGAATCGGTaGACACAAGGGATTTAAAATCCCTC.GGCG.TTCG......CGCTG.TGCGGGTTCAAGTCCCGC.TCCGGGTACCA chr.trna77-LeuTAA Sc: 71.59

Lys tRNAs

>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTG...........GtCGCAGGTTCGAATCCTGCACGACCCACCA chr.trna8-LysTTT Sc: 99.54 GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTG...........GtCGCAGGTTCGAATCCTGCACGACCCACCA chr.trna28-LysTTT Sc: 99.54 GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTG...........GtCGCAGGTTCGAATCCTGCACGACCCACCA chr.trna14-LysTTT Sc: 99.54 GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTG...........GtCGCAGGTTCGAATCCTGCACGACCCACCA chr.trna13-LysTTT Sc: 99.54 GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTG...........GtCGCAGGTTCGAATCCTGCACGACCCACCA chr.trna12-LysTTT Sc: 99.54 GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTG...........GtCGCAGGTTCGAATCCTGCACGACCCACCA chr.trna10-LysTTT Sc: 99.54

Met tRNAs

>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>.>>.......<<.<<<<<<<<<.... GGCTACGTAGCTCAGTT.GGTtA.GAGCACATCACTCATAATGATGGG...........GtCACAGGTTCGAATCCCGTCGTAGCCACCA chr.trna87-MetCAT Sc: 96.18 GGCTACGTAGCTCAGTT.GGTtA.GAGCACATCACTCATAATGATGGG...........GtCACAGGTTCGAATCCCGTCGTAGCCACCA chr.trna83-MetCAT Sc: 96.18 >>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGCCCCTTAGCTCAGT..GGTtA.GAGCAGGCGACTCATAATCGCTTG...........GtCGCTGGTTCAAGTCCAGCAGGGGCCACCA chr.trna33-MetCAT Sc: 93.86 >>>>>>>..>>>>...........<<<<..>>>>.......<<<<.................>>>>>.......<<<<<<<<<<<<.... GGCCCTTTAGCTCAGT..GGTgA.GAGCGAGCGACTCATAATCGCCAG...........GtCGCTGGTTCAAATCCAGCAAGGGCCACCA chr.trna16-MetCAT Sc: 88.46 .>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<..... CGCGGGGTGGAGCAGCCtGGT.A.GCTCGTCGGGCTCATAACCCGAAG...........GtCGTCGGTTCAAATCCGGCCCCCGCAACCA chr.trna61-MetCAT Sc: 86.07 CGCGGGGTGGAGCAGCCtGGT.A.GCTCGTCGGGCTCATAACCCGAAG...........GtCGTCGGTTCAAATCCGGCCCCCGCAACCA chr.trna31-MetCAT Sc: 86.07 CGCGGGGTGGAGCAGCCtGGT.A.GCTCGTCGGGCTCATAACCCGAAG...........GtCGTCGGTTCAAATCCGGCCCCCGCAACCA chr.trna29-MetCAT Sc: 86.07 CGCGGGGTGGAGCAGCAtGGT.A.GCTCGTCGGGCTCATAACCCGAAG...........GtCGTCGGTTCAAATCCGGCCCCCGCAACCA chr.trna30-MetCAT Sc: 84.66

Phe tRNAs

>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGT...........GtCCTTGGTTCGATTCCGAGTCCGGGCACCA chr.trna57-PheGAA Sc: 84.11 GCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGT...........GtCCTTGGTTCGATTCCGAGTCCGGGCACCA chr.trna32-PheGAA Sc: 84.11

Pro tRNAs

>>>>>>>..>>>>.........<<<<.>>>.>.......<.<<<................>>>>>.......<<<<<<<<<<<<.... CGGCACGTAGCGCAGCCtGGTAGCGCACCGTCATGGGGTGTCGGGG...........GtCGGAGGTTCAAATCCTCTCGTGCCGACCA chr.trna23-ProGGG Sc: 77.97 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGTGATTGGCGCAGCCtGGTAGCGCACTTCGTTCGGGACGAAGGG...........GtCGGAGGTTCGAATCCTCTATCACCGACCA chr.trna58-ProCGG Sc: 85.12 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGCGAGTAGCGCAGCTtGGTAGCGCAACTGGTTTGGGACCAGTGG...........GtCGGAGGTTCGAATCCTCTCTCGCCGACCA chr.trna41-ProTGG Sc: 92.73

SeC tRNAs

.>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<..>>>>>>>....<<<<<<<..>>>>>.......<<<<<<<<<<<<.... gGAAGATCGTCGTCTCCGGTgA.GGCGGCTGGACTTCAAATCCAGTTGGGGCCGCCAGCGGTCCCGGGCAGGTTCGACTCCTGTGATCTTCC... chr.trna34-SeC(p)TCA Sc: 75.19

Ser tRNAs

>>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>>.........<<<<<..>>>>>.......<<<<<..<<<<<<<.... GGTGAGGTGTCCGAGTGGCtgA.AGGAGCACGCCTGGAAAGTGTGT.ATACG..GCAA...CGTAT.CGGGGGTTCGAATCCCCC..CCTCACCGCCA chr.trna82-SerGGA Sc: 68.60 GGTGAGGTGTCCGAGTGGCtgA.AGGAGCACGCCTGGAAAGTGTGT.ATACG..GCAA...CGTAT.CGGGGGTTCGAATCCCCC..CCTCACCGCCA chr.trna80-SerGGA Sc: 68.60 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>>>.......<<<<<<..>>>>>.......<<<<<..<<<<<<<.... GGAGAGATGCCGGAGCGGCtgA.ACGGACCGGTCTCGAAAACCGGA.GTAGGG.GCAA..CTCTAC.CGGGGGTTCAAATCCCCC..TCTCTCCGCCA chr.trna74-SerCGA Sc: 75.49 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>...........<<<<..>>>>>.......<<<<<..<<<<<<<.... GGAAGTGTGGCCGAGCGGTtgA.AGGCACCGGTCTTGAAAACCGGCGACCC...GAAA....GGGTTCCAGAGTTCGAATCTCTG..CGCTTCCGCCA chr.trna81-SerTGA Sc: 76.89 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>>>>.....<<<<<<<..>>>>>.......<<<<<..<<<<<<<.... GGTGAGGTGGCCGAGAGGCtgA.AGGCGCTCCCCTGCTAAGGGAGT.ATGCGGTCAAAaGCTGCAT.CCGGGGTTCGAATCCCCG..CCTCACCGCCA chr.trna63-SerGCT Sc: 72.46

Sup tRNAs

Thr tRNAs

>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGAG...........GtCGGCAGTTCGAATCTGCCTATCAGCACCA chr.trna48-ThrGGT Sc: 94.75 >>>>>>>..>>>>........<<<<..>>>>.......<<<<.................>>>>>.......<<<<<<<<<<<<.... GCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAG...........GtCGTAGGTTCGACTCCTATTATCGGCACCA chr.trna5-ThrCGT Sc: 91.49 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>.>.......<.<<<<<<<<<<.... GCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAG...........GtCACCAGTTCGATTCCGGTAGTCGGCACCA chr.trna45-ThrTGT Sc: 91.83

Trp tRNAs

>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... AGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGT...........GtTGGGAGTTCGAGTCTCTCCGCCCCTGCCA chr.trna37-TrpCCA Sc: 82.06

Tyr tRNAs

>>>>>>>..>>>............<<<.>>>>>.......<<<<<.>>>........<<<...>>>>>.......<<<<<.<<<<<<<.... GGTGGGGTTCCCGAGCGGCcaA.AGGGAGCAGACTGTAAATCTGCCGTCACA.....GACTtCGAAGGTTCGAATCCTTC.CCCCACCACCA chr.trna46-TyrGTA Sc: 67.63 GGTGGGGTTCCCGAGCGGCcaA.AGGGAGCAGACTGTAAATCTGCCGTCATC.....GACTtCGAAGGTTCGAATCCTTC.CCCCACCACCA chr.trna79-TyrGTA Sc: 66.93 GGTGGGGTTCCCGAGCGGCcaA.AGGGAGCAGACTGTAAATCTGCCGTCATC.....GACTtCGAAGGTTCGAATCCTTC.CCCCACCACCA chr.trna78-TyrGTA Sc: 66.93

Val tRNAs

>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGTCCGTAGCTCAGTTGGTtAGAGCACCACCTTGACATGGTGGGG...........GtCGGTGGTTCGAGTCCACTCGGACGCACCA chr.trna20-ValGAC Sc: 96.76 GCGTTCATAGCTCAGTTGGTtAGAGCACCACCTTGACATGGTGGGG...........GtCGTTGGTTCGAGTCCAATTGAACGCACCA chr.trna19-ValGAC Sc: 92.34 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGTGATTAGCTCAGCTGGG.AGAGCACCTCCCTTACAAGGAGGGG...........GtCGGCGGTTCGATCCCGTCATCACCCACCA chr.trna9-ValTAC Sc: 94.34 GGGTGATTAGCTCAGCTGGG.AGAGCACCTCCCTTACAAGGAGGGG...........GtCGGCGGTTCGATCCCGTCATCACCCACCA chr.trna27-ValTAC Sc: 94.34 GGGTGATTAGCTCAGCTGGG.AGAGCACCTCCCTTACAAGGAGGGG...........GtCGGCGGTTCGATCCCGTCATCACCCACCA chr.trna26-ValTAC Sc: 94.34 GGGTGATTAGCTCAGCTGGG.AGAGCACCTCCCTTACAAGGAGGGG...........GtCGGCGGTTCGATCCCGTCATCACCCACCA chr.trna25-ValTAC Sc: 94.34 GGGTGATTAGCTCAGCTGGG.AGAGCACCTCCCTTACAAGGAGGGG...........GtCGGCGGTTCGATCCCGTCATCACCCACCA chr.trna11-ValTAC Sc: 94.34

The Genomic tRNA Database is curated by
Todd Lowe and Patricia Chan. Please email lowe@soe.ucsc.edu with any questions and comments. To submit corrections, please use our Bug and Request Tracking System.