tRNAscan-SE Analysis of the Erwinia carotovora atroseptica SCRI1043 Genome
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| Predicted tRNA Secondary Structures |
Click on "View tRNA" buttons to view 2-D tRNA structures
Cove-predicted tRNA secondary structures rendered by
NAVIEW (c) 1988 Robert E. Bruccoleri
chr.trna54 (3695604-3695529) Length: 76 bp
Type: Ala Anticodon: GGC at 34-36 (3695571-3695569) Score: 86.51
Seq: GGGGCTATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAGGtCAGCGGTTCGATCCCGCTTAGCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna55 (3695481-3695406) Length: 76 bp
Type: Ala Anticodon: GGC at 34-36 (3695448-3695446) Score: 86.51
Seq: GGGGCTATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAGGtCAGCGGTTCGATCCCGCTTAGCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna10 (284192-284267) Length: 76 bp
Type: Ala Anticodon: TGC at 34-36 (284225-284227) Score: 86.08
Seq: GGGGTTATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGtCTGCGGTTCGATCCCGCATAGCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna4 (242364-242439) Length: 76 bp
Type: Ala Anticodon: TGC at 34-36 (242397-242399) Score: 86.08
Seq: GGGGTTATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGtCTGCGGTTCGATCCCGCATAGCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna40 (4475754-4475679) Length: 76 bp
Type: Ala Anticodon: TGC at 34-36 (4475721-4475719) Score: 88.77
Seq: GGGGCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGtCTGCGGTTCGATCCCGCATAGCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna48 (3781445-3781369) Length: 77 bp
Type: Arg Anticodon: ACG at 35-37 (3781411-3781409) Score: 87.22
Seq: GCATCCGTAGCTCAGCTGGAtAGAGTACTCGGCTACGAACCGAGCGGtCGGAGGTTCGAATCCTCCCGGATGCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna49 (3781297-3781221) Length: 77 bp
Type: Arg Anticodon: ACG at 35-37 (3781263-3781261) Score: 87.22
Seq: GCATCCGTAGCTCAGCTGGAtAGAGTACTCGGCTACGAACCGAGCGGtCGGAGGTTCGAATCCTCCCGGATGCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna50 (3781167-3781091) Length: 77 bp
Type: Arg Anticodon: ACG at 35-37 (3781133-3781131) Score: 87.22
Seq: GCATCCGTAGCTCAGCTGGAtAGAGTACTCGGCTACGAACCGAGCGGtCGGAGGTTCGAATCCTCCCGGATGCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna35 (4693037-4692961) Length: 77 bp
Type: Arg Anticodon: CCG at 35-37 (4693003-4693001) Score: 91.00
Seq: GCGCCCGTAGCTCAGCTGGAtAGAGCGCTGCCCTCCGGAGGCAGAGGtCTCAGGTTCGAATCCTGTCGGGCGCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<......>>>>.......<<<<.<<<<<<<....
chr.trna26 (3446540-3446614) Length: 75 bp
Type: Arg Anticodon: CCT at 34-36 (3446573-3446575) Score: 69.17
Seq: GTCTCCATAGTTAAACGGAtATAACAAGCCCCTCCTAAGGGCTAGtTGCAGGTTCGATTCCTGCTGGGGACACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
chr.trna27 (3483053-3483129) Length: 77 bp
Type: Arg Anticodon: TCT at 35-37 (3483087-3483089) Score: 94.70
Seq: GCGCCCTTAGCTCAGTTGGAtAGAGCAACGGCCTTCTAAGCCGTAGGtCACAGGTTCGAGCCCTGTAGGGCGTACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna64 (1727986-1727911) Length: 76 bp
Type: Asn Anticodon: GTT at 34-36 (1727953-1727951) Score: 83.84
Seq: TCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGtCACTGGTTCAAGTCCAGTCAGGGGAGCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna25 (3236126-3236201) Length: 76 bp
Type: Asn Anticodon: GTT at 34-36 (3236159-3236161) Score: 87.13
Seq: TCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGtCACTGGTTCGAGTCCAGTCAGAGGAGCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna63 (1927214-1927139) Length: 76 bp
Type: Asn Anticodon: GTT at 34-36 (1927181-1927179) Score: 87.13
Seq: TCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGtCACTGGTTCGAGTCCAGTCAGAGGAGCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna33 (4741777-4741701) Length: 77 bp
Type: Asp Anticodon: GTC at 35-37 (4741743-4741741) Score: 90.47
Seq: GGAGCGGTAGTTCAGTTGGTtAGAATACCTGCCTGTCACGCAGGGGGtCGCGGGTTCGAGCCCCGTCCGTTCCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna52 (3754342-3754266) Length: 77 bp
Type: Asp Anticodon: GTC at 35-37 (3754308-3754306) Score: 90.47
Seq: GGAGCGGTAGTTCAGTTGGTtAGAATACCTGCCTGTCACGCAGGGGGtCGCGGGTTCGAGCCCCGTCCGTTCCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna53 (3748786-3748710) Length: 77 bp
Type: Asp Anticodon: GTC at 35-37 (3748752-3748750) Score: 90.47
Seq: GGAGCGGTAGTTCAGTTGGTtAGAATACCTGCCTGTCACGCAGGGGGtCGCGGGTTCGAGCCCCGTCCGTTCCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna58 (3227768-3227695) Length: 74 bp
Type: Cys Anticodon: GCA at 33-35 (3227736-3227734) Score: 51.48
Seq: GGCGCGTTAACAAAGCGGTTATGTAGCGGATTGCAAATCCGTCTAGTCCGGTTCGACTCCGGAACGCGCCTCCA
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
chr.trna70 (1496662-1496589) Length: 74 bp
Type: Gln Anticodon: CTG at 33-35 (1496630-1496628) Score: 73.94
Seq: TGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCAtCCGAGGTTCGAATCCTCGTACCCCAGCCA
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
chr.trna68 (1496874-1496800) Length: 75 bp
Type: Gln Anticodon: TTG at 33-35 (1496842-1496840) Score: 73.02
Seq: TGGGGTATCGCCAAGCGGTAAGGCACTGGTTTTTGATACCAGCATtCCCTGGTTCGAATCCAGGTACCCCAGCCA
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna67 (1496984-1496910) Length: 75 bp
Type: Gln Anticodon: TTG at 33-35 (1496952-1496950) Score: 74.33
Seq: TGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATtCCCTGGTTCGAATCCAGGTACCCCAGCCA
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna1 (18580-18655) Length: 76 bp
Type: Glu Anticodon: TTC at 35-37 (18614-18616) Score: 56.95
Seq: GTCCCCATCGTCTAGAGGCctAGGACACTGCCCTTTCACGGCTGTAACAGGGGTTCGAATCCCCTTGGGGACGCCA
Str: >>>>>>>..>>>>.........<<<<.>.>>>.......<<<.<....>>>>>.......<<<<<<<<<<<<....
chr.trna32 (4745286-4745211) Length: 76 bp
Type: Glu Anticodon: TTC at 35-37 (4745252-4745250) Score: 56.95
Seq: GTCCCCATCGTCTAGAGGCctAGGACACTGCCCTTTCACGGCTGTAACAGGGGTTCGAATCCCCTTGGGGACGCCA
Str: >>>>>>>..>>>>.........<<<<.>.>>>.......<<<.<....>>>>>.......<<<<<<<<<<<<....
chr.trna44 (3949551-3949476) Length: 76 bp
Type: Glu Anticodon: TTC at 35-37 (3949517-3949515) Score: 56.95
Seq: GTCCCCATCGTCTAGAGGCctAGGACACTGCCCTTTCACGGCTGTAACAGGGGTTCGAATCCCCTTGGGGACGCCA
Str: >>>>>>>..>>>>.........<<<<.>.>>>.......<<<.<....>>>>>.......<<<<<<<<<<<<....
chr.trna51 (3757851-3757776) Length: 76 bp
Type: Glu Anticodon: TTC at 35-37 (3757817-3757815) Score: 56.95
Seq: GTCCCCATCGTCTAGAGGCctAGGACACTGCCCTTTCACGGCTGTAACAGGGGTTCGAATCCCCTTGGGGACGCCA
Str: >>>>>>>..>>>>.........<<<<.>.>>>.......<<<.<....>>>>>.......<<<<<<<<<<<<....
chr.trna17 (847939-848012) Length: 74 bp
Type: Gly Anticodon: CCC at 33-35 (847971-847973) Score: 77.86
Seq: GCGAGTGTAGTTCAATGGTAGAACGGCAGCTTCCCAAGCTGCATACGAGGGTTCGATTCCCTTCACTCGCTCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
chr.trna41 (4434608-4434533) Length: 76 bp
Type: Gly Anticodon: GCC at 34-36 (4434575-4434573) Score: 93.74
Seq: GCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGtCGCGAGTTCGAGTCTCGTTTCCCGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna42 (4434456-4434381) Length: 76 bp
Type: Gly Anticodon: GCC at 34-36 (4434423-4434421) Score: 93.74
Seq: GCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGtCGCGAGTTCGAGTCTCGTTTCCCGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna43 (4416700-4416625) Length: 76 bp
Type: Gly Anticodon: GCC at 34-36 (4416667-4416665) Score: 93.74
Seq: GCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGtCGCGAGTTCGAGTCTCGTTTCCCGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna57 (3227895-3227820) Length: 76 bp
Type: Gly Anticodon: GCC at 34-36 (3227862-3227860) Score: 93.74
Seq: GCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGtCGCGAGTTCGAGTCTCGTTTCCCGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna7 (250093-250167) Length: 75 bp
Type: Gly Anticodon: TCC at 34-36 (250126-250128) Score: 63.22
Seq: GCGGGCATCGTATAATGGCtATTACCTCAGCCTTCCAAGCTGATGATGTGGGTTCGATTCCCACTGCCCGCTCCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
chr.trna36 (4692844-4692769) Length: 76 bp
Type: His Anticodon: GTG at 34-36 (4692811-4692809) Score: 84.86
Seq: GTGGCTATAGCTCAGTTGGTAGAGCCCTGGATTGTGATTCCAGTTGtCGTGGGTTCGAGTCCCATTAGCCACCCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna3 (242245-242321) Length: 77 bp
Type: Ile Anticodon: GAT at 35-37 (242279-242281) Score: 88.37
Seq: AGGCTTGTAGCTCAGGTGGTtAGAGCGCACCCCTGATAAGGGTGAGGtCGGTGGTTCAAGTCCACTCAGGCCTACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna39 (4475873-4475797) Length: 77 bp
Type: Ile Anticodon: GAT at 35-37 (4475839-4475837) Score: 88.37
Seq: AGGCTTGTAGCTCAGGTGGTtAGAGCGCACCCCTGATAAGGGTGAGGtCGGTGGTTCAAGTCCACTCAGGCCTACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna9 (284073-284149) Length: 77 bp
Type: Ile Anticodon: GAT at 35-37 (284107-284109) Score: 88.37
Seq: AGGCTTGTAGCTCAGGTGGTtAGAGCGCACCCCTGATAAGGGTGAGGtCGGTGGTTCAAGTCCACTCAGGCCTACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna11 (465940-466024) Length: 85 bp
Type: Leu Anticodon: CAA at 35-37 (465974-465976) Score: 79.54
Seq: GCCGAAGTGGCGAAATCGGTaGACGCAGTTGATTCAAAATCAACCATCGAAAGATGTGCCGGTTCGATTCCGGCCTTCGGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>....<<<..>>>>>.......<<<<<<<<<<<<....
chr.trna14 (806751-806837) Length: 87 bp
Type: Leu Anticodon: CAG at 35-37 (806785-806787) Score: 66.71
Seq: GCGAAGGTGGCGGAATTGGTaGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGAGGGTTCAAGTCCCTCTCTTCGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>....<<<<..>>>>>.......<<<<<<<<<<<<....
chr.trna15 (806915-807001) Length: 87 bp
Type: Leu Anticodon: CAG at 35-37 (806949-806951) Score: 66.71
Seq: GCGAAGGTGGCGGAATTGGTaGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGAGGGTTCAAGTCCCTCTCTTCGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>....<<<<..>>>>>.......<<<<<<<<<<<<....
chr.trna37 (4692719-4692633) Length: 87 bp
Type: Leu Anticodon: CAG at 35-37 (4692685-4692683) Score: 66.71
Seq: GCGAAGGTGGCGGAATTGGTaGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGAGGGTTCAAGTCCCTCTCTTCGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>....<<<<..>>>>>.......<<<<<<<<<<<<....
chr.trna16 (807076-807162) Length: 87 bp
Type: Leu Anticodon: CAG at 35-37 (807110-807112) Score: 69.19
Seq: GCGAAGGTGGCGGAATTGGTaGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGAGGGTTCAAGTCCCTCTCTTCGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>....<<<<..>>>>>.......<<<<<<<<<<<<....
chr.trna12 (773027-773113) Length: 87 bp
Type: Leu Anticodon: GAG at 35-37 (773061-773063) Score: 65.51
Seq: GCCGTGGTGGTGGAATTGGTaGACACGCTACCTTGAGGTGGTAGTGCCCGATTGGGCTTACGGGTTCAAGTCCCGTCCTCGGTACCA
Str: >>>>.>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>><<<<<<..>>>>>.......<<<<<<<.<<<<....
chr.trna59 (3227686-3227600) Length: 87 bp
Type: Leu Anticodon: TAA at 35-37 (3227652-3227650) Score: 76.03
Seq: GCCCGGGTGGTGAAATCGGTaGACACAAGGGATTTAAAATCCCTCGGCGTTCGCGCTGTGCGGGTTCAAGTCCCGCCCCGGGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>....<<<<..>>>>>.......<<<<<<<<<<<<....
chr.trna66 (1497125-1497041) Length: 85 bp
Type: Leu Anticodon: TAG at 35-37 (1497091-1497089) Score: 78.30
Seq: GCGGGAGTGGCGAAATTGGTaGACGCACCAGATTTAGGTTCTGGCGCCGCAAGGTGTGCGAGTTCAAGTCTCGCCTCCCGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>....<<<..>>>>>.......<<<<<<<<<<<<....
chr.trna56 (3232910-3232835) Length: 76 bp
Type: Lys Anticodon: CTT at 34-36 (3232877-3232875) Score: 92.42
Seq: GGGTCGTTAGCTCAGTTGGTAGAGCCGTTGACTCTTAATCAATTGGtCGCAGGTTCGAACCCTGCACGACCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna18 (1556667-1556742) Length: 76 bp
Type: Lys Anticodon: TTT at 34-36 (1556700-1556702) Score: 97.44
Seq: GGGTCGTTAGCTCAGTCGGTAGAGCAGTTGACTTTTAATCAATTGGtCGCAGGTTCGAATCCTGCACGACCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna19 (1556938-1557013) Length: 76 bp
Type: Lys Anticodon: TTT at 34-36 (1556971-1556973) Score: 97.44
Seq: GGGTCGTTAGCTCAGTCGGTAGAGCAGTTGACTTTTAATCAATTGGtCGCAGGTTCGAATCCTGCACGACCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna31 (3698880-3698955) Length: 76 bp
Type: Lys Anticodon: TTT at 34-36 (3698913-3698915) Score: 97.44
Seq: GGGTCGTTAGCTCAGTCGGTAGAGCAGTTGACTTTTAATCAATTGGtCGCAGGTTCGAATCCTGCACGACCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna13 (776983-777059) Length: 77 bp
Type: Met Anticodon: CAT at 35-37 (777017-777019) Score: 86.07
Seq: CGCGGGGTGGAGCAGCCtGGTAGCTCGTCGGGCTCATAACCCGAAGGtCGTCGGTTCAAATCCGGCCCCCGCAACCA
Str: .>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.....
chr.trna71 (1121408-1121332) Length: 77 bp
Type: Met Anticodon: CAT at 35-37 (1121374-1121372) Score: 86.07
Seq: CGCGGGGTGGAGCAGCCtGGTAGCTCGTCGGGCTCATAACCCGAAGGtCGTCGGTTCAAATCCGGCCCCCGCAACCA
Str: .>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.....
chr.trna72 (1121283-1121207) Length: 77 bp
Type: Met Anticodon: CAT at 35-37 (1121249-1121247) Score: 86.07
Seq: CGCGGGGTGGAGCAGCCtGGTAGCTCGTCGGGCTCATAACCCGAAGGtCGTCGGTTCAAATCCGGCCCCCGCAACCA
Str: .>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.....
chr.trna73 (1121158-1121082) Length: 77 bp
Type: Met Anticodon: CAT at 35-37 (1121124-1121122) Score: 86.07
Seq: CGCGGGGTGGAGCAGCCtGGTAGCTCGTCGGGCTCATAACCCGAAGGtCGTCGGTTCAAATCCGGCCCCCGCAACCA
Str: .>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.....
chr.trna75 (750561-750486) Length: 76 bp
Type: Met Anticodon: CAT at 34-36 (750528-750526) Score: 93.86
Seq: GGCCCCTTAGCTCAGTGGTtAGAGCAGGCGACTCATAATCGCTTGGtCGCTGGTTCAAGTCCAGCAGGGGCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna65 (1497209-1497133) Length: 77 bp
Type: Met Anticodon: CAT at 35-37 (1497175-1497173) Score: 94.35
Seq: GGCTACGTAGCTCAGCTGGTtAGAGCACAGCACTCATAATGCTGGGGtCACAGGTTCGATTCCCGTCGTAGCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>.>>.......<<.<<<<<<<<<....
chr.trna69 (1496745-1496669) Length: 77 bp
Type: Met Anticodon: CAT at 35-37 (1496711-1496709) Score: 94.35
Seq: GGCTACGTAGCTCAGCTGGTtAGAGCACAGCACTCATAATGCTGGGGtCACAGGTTCGATTCCCGTCGTAGCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>.>>.......<<.<<<<<<<<<....
chr.trna74 (1075298-1075223) Length: 76 bp
Type: Phe Anticodon: GAA at 34-36 (1075265-1075263) Score: 85.44
Seq: GCCCGGATAGCTCAGTCGGTAGAGCAGAGGATTGAAAATCCTCGTGtCCTTGGTTCGATTCCGAGTCCGGGCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna76 (688659-688584) Length: 76 bp
Type: Phe Anticodon: GAA at 34-36 (688626-688624) Score: 85.44
Seq: GCCCGGATAGCTCAGTCGGTAGAGCAGAGGATTGAAAATCCTCGTGtCCTTGGTTCGATTCCGAGTCCGGGCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna24 (3091867-3091943) Length: 77 bp
Type: Pro Anticodon: GGG at 35-37 (3091901-3091903) Score: 77.97
Seq: CGGCACGTAGCGCAGCCtGGTAGCGCACCGTCATGGGGTGTCGGGGGtCGGAGGTTCAAATCCTCTCGTGCCGACCA
Str: >>>>>>>..>>>>.........<<<<.>>>.>.......<.<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna2 (55285-55361) Length: 77 bp
Type: Pro Anticodon: TGG at 35-37 (55319-55321) Score: 92.73
Seq: CGGCGAGTAGCGCAGCTtGGTAGCGCAACTGGTTTGGGACCAGTGGGtCGGAGGTTCGAATCCTCTCTCGCCGACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna38 (4692589-4692513) Length: 77 bp
Type: Pro Anticodon: TGG at 35-37 (4692555-4692553) Score: 92.73
Seq: CGGCGAGTAGCGCAGCTtGGTAGCGCAACTGGTTTGGGACCAGTGGGtCGGAGGTTCGAATCCTCTCTCGCCGACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna47 (3781546-3781454) Length: 93 bp
Type: Ser Anticodon: GCT at 35-37 (3781512-3781510) Score: 74.38
Seq: GGTGAGGTGGCCGAGAGGCtgAAGGCGCTCCCCTGCTAAGGGAGTATGCGGTCAAAaGCTGCATCGAGGGTTCGAATCCCTCCCTCACCGCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>>>.....<<<<<<<.>>>>>.......<<<<<<<<<<<<....
chr.trna23 (2846049-2846138) Length: 90 bp
Type: Ser Anticodon: GGA at 35-37 (2846083-2846085) Score: 62.30
Seq: GGTGAGGTGTCCGAGAGGCtgAAGGAGCACGCCTGGAAAGTGTGTATACGTGAAAACGTATCAAGGGTTCGAATCCCTTCCTCACCGCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>>....<<<<<<.>>>>>.......<<<<<<<<<<<<....
chr.trna62 (1989221-1989132) Length: 90 bp
Type: Ser Anticodon: GGA at 35-37 (1989187-1989185) Score: 62.30
Seq: GGTGAGGTGTCCGAGAGGCtgAAGGAGCACGCCTGGAAAGTGTGTATACGTGAAAACGTATCAAGGGTTCGAATCCCTTCCTCACCGCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>>....<<<<<<.>>>>>.......<<<<<<<<<<<<....
chr.trna20 (1586840-1586927) Length: 88 bp
Type: Ser Anticodon: TGA at 35-37 (1586874-1586876) Score: 76.91
Seq: GGAGGAGTGGCCGAGTGGTtgAAGGCACCGGTCTTGAAAACCGGCGACGCGAAAGTGTTCTAGAGTTCGAATCTCTACTCCTCCGCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>>....<<<<..>>>>>.......<<<<<<<<<<<<....
chr.trna21 (2012343-2012430) Length: 88 bp
Type: Ser Anticodon: TGA at 35-37 (2012377-2012379) Score: 76.91
Seq: GGAGGAGTGGCCGAGTGGTtgAAGGCACCGGTCTTGAAAACCGGCGACGCGAAAGTGTTCTAGAGTTCGAATCTCTACTCCTCCGCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>>....<<<<..>>>>>.......<<<<<<<<<<<<....
chr.trna46 (3880244-3880169) Length: 76 bp
Type: Thr Anticodon: CGT at 34-36 (3880211-3880209) Score: 91.49
Seq: GCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGtCGTAGGTTCGACTCCTATTATCGGCACCA
Str: >>>>>>>..>>>>........<<<<..>>>>.......<<<<......>>>>>.......<<<<<<<<<<<<....
chr.trna45 (3946076-3946001) Length: 76 bp
Type: Thr Anticodon: GGT at 34-36 (3946043-3946041) Score: 88.70
Seq: GCTGATATGGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGAGGtCCCCAGTTCGACTCTGGGTATCAGCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna8 (250174-250249) Length: 76 bp
Type: Thr Anticodon: GGT at 34-36 (250207-250209) Score: 94.75
Seq: GCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGAGGtCGGCAGTTCGAATCTGCCTATCAGCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna5 (249788-249863) Length: 76 bp
Type: Thr Anticodon: TGT at 34-36 (249821-249823) Score: 92.56
Seq: GCCGGCTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGtCACCAGTTCGATTCCGGTAGCCGGCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>.>.......<.<<<<<<<<<<....
chr.trna34 (4741646-4741571) Length: 76 bp
Type: Trp Anticodon: CCA at 34-36 (4741613-4741611) Score: 87.12
Seq: AGGGGCGTAGCTCAGTTGGTAGAGCACCGGTCTCCAAAACCGGGTGtCGCGAGTTCGAGTCTCTCCGCCCCTGCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>.>>>.......<<<.<<<<<<<<....
chr.trna22 (2643735-2643819) Length: 85 bp
Type: Tyr Anticodon: GTA at 35-37 (2643769-2643771) Score: 67.63
Seq: GGTGGGGTTCCCGAGCGGCcaAAGGGAGCAGACTGTAAATCTGCCGTCACAGACTtCGAAGGTTCGAATCCTTCCCCCACCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>...<<<...>>>>>.......<<<<<<<<<<<<....
chr.trna6 (249879-249963) Length: 85 bp
Type: Tyr Anticodon: GTA at 35-37 (249913-249915) Score: 67.63
Seq: GGTGGGGTTCCCGAGCGGCcaAAGGGAGCAGACTGTAAATCTGCCGTCACAGACTtCGAAGGTTCGAATCCTTCCCCCACCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>...<<<...>>>>>.......<<<<<<<<<<<<....
chr.trna61 (2159669-2159593) Length: 77 bp
Type: Val Anticodon: GAC at 35-37 (2159635-2159633) Score: 91.89
Seq: ACGACCGTAGCTCAGTTGGTtAGAGCACCACCTTGACATGGTGGGGGtCGGTGGTTCGAGTCCACTCGGTCGTACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna60 (2179736-2179660) Length: 77 bp
Type: Val Anticodon: GAC at 35-37 (2179702-2179700) Score: 92.34
Seq: GCGTTCATAGCTCAGTTGGTtAGAGCACCACCTTGACATGGTGGGGGtCGTTGGTTCGAGTCCAATTGAACGCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna28 (3698520-3698595) Length: 76 bp
Type: Val Anticodon: TAC at 34-36 (3698553-3698555) Score: 94.34
Seq: GGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGtCGGCGGTTCGATCCCGTCATCACCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna29 (3698654-3698729) Length: 76 bp
Type: Val Anticodon: TAC at 34-36 (3698687-3698689) Score: 94.34
Seq: GGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGtCGGCGGTTCGATCCCGTCATCACCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna30 (3698797-3698872) Length: 76 bp
Type: Val Anticodon: TAC at 34-36 (3698830-3698832) Score: 94.34
Seq: GGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGtCGGCGGTTCGATCCCGTCATCACCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
The Genomic tRNA Database is curated by Todd Lowe and Patricia Chan.
Please email lowe@soe.ucsc.edu
with any questions and comments. To submit corrections, please use our
Bug and Request Tracking System.