tRNAscan-SE Analysis of the Enterococcus faecalis V583 Genome
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| Predicted tRNA Secondary Structures |
Click on "View tRNA" buttons to view 2-D tRNA structures
Cove-predicted tRNA secondary structures rendered by
NAVIEW (c) 1988 Robert E. Bruccoleri
chr.trna31 (1019820-1019892) Length: 73 bp
Type: Ala Anticodon: TGC at 34-36 (1019853-1019855) Score: 84.64
Seq: GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGtCAGCGGTTCGATCCCGCTAGGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna58 (2771768-2771696) Length: 73 bp
Type: Ala Anticodon: TGC at 34-36 (2771735-2771733) Score: 84.64
Seq: GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGtCAGCGGTTCGATCCCGCTAGGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna9 (254080-254152) Length: 73 bp
Type: Ala Anticodon: TGC at 34-36 (254113-254115) Score: 84.64
Seq: GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGtCAGCGGTTCGATCCCGCTAGGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna56 (3164595-3164522) Length: 74 bp
Type: Arg Anticodon: ACG at 35-37 (3164561-3164559) Score: 71.47
Seq: GCACCCATAGCTCAACTGGAtAGAGTGTTTGACTACGAATCAAAAGGtTAGGGGTTCGACTCCCTTTGGGTGCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna7 (253908-253981) Length: 74 bp
Type: Arg Anticodon: ACG at 35-37 (253942-253944) Score: 71.47
Seq: GCACCCATAGCTCAACTGGAtAGAGTGTTTGACTACGAATCAAAAGGtTAGGGGTTCGACTCCCTTTGGGTGCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna68 (739825-739754) Length: 72 bp
Type: Arg Anticodon: CCG at 34-36 (739792-739790) Score: 57.53
Seq: GCGCCCTTAGTGTAGTGGAtATCACGTAAGATTCCGGTTCTTGAGACGGGGGTTCGATTCCCTCAGGGCGCG
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.
chr.trna30 (980392-980465) Length: 74 bp
Type: Arg Anticodon: CCT at 35-37 (980426-980428) Score: 75.12
Seq: GTTCTCGTAGCTCAGTAGGAtAGAGCAACCGCCTCCTAAGCGGTAGGtCGCTGGTTCAATTCCAGTCGGGAACG
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna67 (931046-930973) Length: 74 bp
Type: Arg Anticodon: TCT at 35-37 (931012-931010) Score: 76.20
Seq: GTCATAGTAGCTCAGCAGGAtAGAGCATCCGCCTTCTAAGCGGACGGtCGGGGGTTCGAATCCCTCCTGTGACG
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna32 (1023200-1023273) Length: 74 bp
Type: Asn Anticodon: GTT at 35-37 (1023234-1023236) Score: 76.32
Seq: TCCGGCATAGCTCAGTTGGTaGTAGCGCATGACTGTTAATCATGATGtCGTAGGTTCGAGTCCTACTGCCGGAG
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna59 (2768389-2768316) Length: 74 bp
Type: Asn Anticodon: GTT at 35-37 (2768355-2768353) Score: 76.32
Seq: TCCGGCATAGCTCAGTTGGTaGTAGCGCATGACTGTTAATCATGATGtCGTAGGTTCGAGTCCTACTGCCGGAG
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna36 (1023605-1023680) Length: 76 bp
Type: Asp Anticodon: GTC at 34-36 (1023638-1023640) Score: 75.49
Seq: GGTTCCGTGGTGTAGGGGTtAACATGCCTGCCTGTCACGCAGGAGAtCGCGGGTTCAAATCCCGTCGGAACCGCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna20 (255187-255260) Length: 74 bp
Type: Asp Anticodon: GTC at 35-37 (255221-255223) Score: 80.12
Seq: GGTTTGGTAGTTCAGCTGGTtAGAATGCCTGCCTGTCACGCAGGAGGtCGCGGGTTCGAGTCCCGTCCAGACCG
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna14 (254612-254688) Length: 77 bp
Type: Asp Anticodon: GTC at 35-37 (254646-254648) Score: 88.42
Seq: GGTTTGGTAGTTCAGCTGGTtAGAATGCCTGCCTGTCACGCAGGAGGtCGCGGGTTCGAGTCCCGTCCAGACCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna63 (2033470-2033399) Length: 72 bp
Type: Cys Anticodon: GCA at 33-35 (2033438-2033436) Score: 62.94
Seq: GTATCTATGGCGAAGTGGCAACGCTCTAGTTTGCAAAACTAGCATtCGTGGGTTCGAATCCCACTAGATACT
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna42 (1024183-1024253) Length: 71 bp
Type: Cys Anticodon: GCA at 33-35 (1024215-1024217) Score: 71.31
Seq: GGCGGTATAGCCAAGTGGTAAGGCAGAGGTCTGCAAAACCTTCAtCACCGGTTCAAATCCGGTTACCGCCT
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.
chr.trna41 (1024086-1024157) Length: 72 bp
Type: Gln Anticodon: TTG at 33-35 (1024118-1024120) Score: 67.62
Seq: TGGGGTATAGCCAAGCGGTAAGGCAACGGACTTTGACTCCGTCATgCGTTGGTTCGAATCCAGCTACCCCAG
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna46 (1293057-1293128) Length: 72 bp
Type: Gln Anticodon: TTG at 33-35 (1293089-1293091) Score: 67.62
Seq: TGGGGTATAGCCAAGCGGTAAGGCAACGGACTTTGACTCCGTCATgCGTTGGTTCGAATCCAGCTACCCCAG
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna17 (254858-254929) Length: 72 bp
Type: Glu Anticodon: TTC at 34-36 (254891-254893) Score: 70.15
Seq: GGCCCGTTGGTCAAGCGGTtAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTACGGGTCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.
chr.trna25 (255624-255695) Length: 72 bp
Type: Glu Anticodon: TTC at 34-36 (255657-255659) Score: 70.15
Seq: GGCCCGTTGGTCAAGCGGTtAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTACGGGTCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.
chr.trna34 (1023423-1023494) Length: 72 bp
Type: Glu Anticodon: TTC at 34-36 (1023456-1023458) Score: 70.15
Seq: GGCCCGTTGGTCAAGCGGTtAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTACGGGTCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.
chr.trna5 (253721-253792) Length: 72 bp
Type: Gly Anticodon: GCC at 33-35 (253753-253755) Score: 85.49
Seq: GCGGAAATAGCTCAGTGGTAGAGCACCACCTTGCCAAGGTGGGGGtCGCGGGTTCGAACCCCGTTTTCCGCT
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna54 (3164782-3164711) Length: 72 bp
Type: Gly Anticodon: GCC at 33-35 (3164750-3164748) Score: 85.49
Seq: GCGGAAATAGCTCAGTGGTAGAGCACCACCTTGCCAAGGTGGGGGtCGCGGGTTCGAACCCCGTTTTCCGCT
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna15 (254690-254760) Length: 71 bp
Type: Gly Anticodon: TCC at 33-35 (254722-254724) Score: 71.75
Seq: GCGGGTGTAGTTTAGTGGTAAAACCACAGCCTTCCAAGCTGTTGtCGCGAGTTCGATTCTCGTCACCCGCT
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.
chr.trna22 (255353-255423) Length: 71 bp
Type: Gly Anticodon: TCC at 33-35 (255385-255387) Score: 71.75
Seq: GCGGGTGTAGTTTAGTGGTAAAACCACAGCCTTCCAAGCTGTTGtCGCGAGTTCGATTCTCGTCACCCGCT
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.
chr.trna40 (1023999-1024071) Length: 73 bp
Type: His Anticodon: GTG at 34-36 (1024032-1024034) Score: 65.05
Seq: GCGATCGTGGTGAAGTGGTtAACACACCAGATTGTGGCTCTGGCATtCGTGGGTTCGATTCCCATCGGTCGCC
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna16 (254770-254843) Length: 74 bp
Type: Ile Anticodon: GAT at 35-37 (254804-254806) Score: 92.91
Seq: GGGCCTATAGCTCAGCTGGTtAGAGCGCACGCCTGATAAGCGTGAGGtCGATGGTTCGAGTCCATTTAGGCCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna23 (255437-255510) Length: 74 bp
Type: Ile Anticodon: GAT at 35-37 (255471-255473) Score: 92.91
Seq: GGGCCTATAGCTCAGCTGGTtAGAGCGCACGCCTGATAAGCGTGAGGtCGATGGTTCGAGTCCATTTAGGCCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna43 (1024267-1024350) Length: 84 bp
Type: Leu Anticodon: CAA at 35-37 (1024301-1024303) Score: 62.27
Seq: GCCGGCGTGGCGGAATTGGCaGACGCGCTGGACTCAAAATCCAGTTCCTTCACGGGAGTGCCGGTTCGACCCCGGCCGCCGGTA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>....<<<<..>>>>>.......<<<<<<<<<<<<.
chr.trna44 (1281634-1281720) Length: 87 bp
Type: Leu Anticodon: GAG at 35-37 (1281668-1281670) Score: 56.42
Seq: GCAGATGTGTTGGAATTGGCaGACAAGCATGATTGAGGGTCATGTGGACAGATGTCCGTGTGGGTTCGAGTCCCATCATCTGCATCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>..<<<<<..>>>>>.......<<<<<<<<<<<<....
chr.trna55 (3164695-3164610) Length: 86 bp
Type: Leu Anticodon: TAA at 35-37 (3164661-3164659) Score: 68.14
Seq: GCCGGGGTGGCGGAACTGGCaGACGCACAGGACTTAAAATCCTGCGGTGAGTGATCACCGTACCGGTTCGATTCCGGTCCTCGGCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>....<<<<<..>>>>>.......<<<<<<<<<<<<.
chr.trna6 (253808-253893) Length: 86 bp
Type: Leu Anticodon: TAA at 35-37 (253842-253844) Score: 68.14
Seq: GCCGGGGTGGCGGAACTGGCaGACGCACAGGACTTAAAATCCTGCGGTGAGTGATCACCGTACCGGTTCGATTCCGGTCCTCGGCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>....<<<<<..>>>>>.......<<<<<<<<<<<<.
chr.trna3 (253553-253634) Length: 82 bp
Type: Leu Anticodon: TAG at 35-37 (253587-253589) Score: 71.86
Seq: GCGGGTGTGGCGGAATTGGCaGACGCACTAGATTTAGGATCTAGCGCCGCAAGGCGTGGGGGTTCAAGTCCCTTCACCCGCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>....<<<..>>>>>.......<<<<<<<<<<<<.
chr.trna52 (3164950-3164869) Length: 82 bp
Type: Leu Anticodon: TAG at 35-37 (3164916-3164914) Score: 71.86
Seq: GCGGGTGTGGCGGAATTGGCaGACGCACTAGATTTAGGATCTAGCGCCGCAAGGCGTGGGGGTTCAAGTCCCTTCACCCGCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>....<<<..>>>>>.......<<<<<<<<<<<<.
chr.trna27 (446802-446874) Length: 73 bp
Type: Lys Anticodon: CTT at 34-36 (446835-446837) Score: 81.48
Seq: GGGCTGTTAGCTCAGTTGGTAGAGCAGATGACTCTTAATCATCGGGtCGCGGGTTCGAGCCCCTCACAGCCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>.>>>.......<<<.<<<<<<<<.
chr.trna47 (1415796-1415880) Length: 85 bp
Type: Lys Anticodon: TTT at 34-36 (1415829-1415831) Score: 61.43
Seq: AGACGTGTAGCTCAATAGGTAGAGCAATTGATTTTTAATCAATGGTGCGTGATTGCTTgTGCAGGTTCGACTCCTGTCACGTCAA
Str: .>>>>>>..>>>>........<<<<.>>>>>.......<<<<<...>>>....<<<....>>>>>.......<<<<<<<<<<<..
chr.trna2 (253464-253536) Length: 73 bp
Type: Lys Anticodon: TTT at 34-36 (253497-253499) Score: 88.58
Seq: GAGCCGTTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGtCACAGGTTCGAGCCCTGTACGGCTCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna51 (3165039-3164967) Length: 73 bp
Type: Lys Anticodon: TTT at 34-36 (3165006-3165004) Score: 88.58
Seq: GAGCCGTTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGtCACAGGTTCGAGCCCTGTACGGCTCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna66 (1924466-1924393) Length: 74 bp
Type: Met Anticodon: CAT at 35-37 (1924432-1924430) Score: 62.30
Seq: GGACCATTAGCTCAGCTGGTtAGAGCAAACGGCTCATGACTATTCGGtCGATGGTTCGAATTCATCATGGTCGA
Str: .>>>>>>..>>>>.........<<<<.>>.>>.......<<.<<.....>>>>>.......<<<<<<<<<<<..
chr.trna13 (254500-254573) Length: 74 bp
Type: Met Anticodon: CAT at 35-37 (254534-254536) Score: 74.14
Seq: CGCGGGGTGGAGCAGTCaGGTAGCTCGTCGGGCTCATAACCCGAAGGtCGTAGGTTCAAATCCTGCCCCCGCAA
Str: .>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<..
chr.trna19 (255065-255138) Length: 74 bp
Type: Met Anticodon: CAT at 35-37 (255099-255101) Score: 74.14
Seq: CGCGGGGTGGAGCAGTCaGGTAGCTCGTCGGGCTCATAACCCGAAGGtCGTAGGTTCAAATCCTGCCCCCGCAA
Str: .>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<..
chr.trna10 (254176-254249) Length: 74 bp
Type: Met Anticodon: CAT at 35-37 (254210-254212) Score: 77.61
Seq: CGCGGTGTAGCTCAGCTGGCtAGAGCGTCCGGTTCATACCCGGGAGGtCGGGGGTTCGATCCCCTCCGCCGCGA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna48 (1443937-1444010) Length: 74 bp
Type: Met Anticodon: CAT at 35-37 (1443971-1443973) Score: 78.22
Seq: GGACCATTAGCTCAGTCGGTtAGAGCAAACGGCTCATAACCGTTCGGtCGATGGTTCGAATCCGTCGTGGTCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna64 (2006349-2006276) Length: 74 bp
Type: Met Anticodon: CAT at 35-37 (2006315-2006313) Score: 83.10
Seq: GTACCATTAGCTCAGCTGGTtAGAGCAAACGGCTCATAACCGTTCGGtCACAGGTTCGAGTCCTGTATGGTCCA
Str: >.>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<.<.
chr.trna28 (532143-532216) Length: 74 bp
Type: Met Anticodon: CAT at 35-37 (532177-532179) Score: 85.65
Seq: GGACCATTAGCTCAGCTGGTtAGAGCAAACGGCTCATAACCGTTCGGcCACAGGTTCGAGTCCTGTATGGTCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna26 (326260-326333) Length: 74 bp
Type: Met Anticodon: CAT at 35-37 (326294-326296) Score: 88.72
Seq: GGACCATTAGCTCAGTTGGTtAGAGCAAACGGCTCATAACCGTTCGGtCACAGGTTCGAGCCCTGTATGGTCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna11 (254270-254343) Length: 74 bp
Type: Met Anticodon: CAT at 35-37 (254304-254306) Score: 89.25
Seq: GGACCTTTAGCTCAGTTGGTtAGAGCAGACGGCTCATAACCGTCCGGtCGTAGGTTCGAGTCCTACAAGGTCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna37 (1023726-1023798) Length: 73 bp
Type: Phe Anticodon: GAA at 34-36 (1023759-1023761) Score: 75.32
Seq: GGCGTGGTAGCTCAGTTGGTAGAGCAACGGATTGAAGCTCCGTGTGtCGGCAGTTCGACTCTGTCTCACGCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna21 (255266-255338) Length: 73 bp
Type: Phe Anticodon: GAA at 34-36 (255299-255301) Score: 75.85
Seq: GGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGtCGGCAGTTCGATTCTGTCCCGCGCCA
Str: >>>.>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<.<<<.
chr.trna57 (3164432-3164359) Length: 74 bp
Type: Pro Anticodon: TGG at 35-37 (3164398-3164396) Score: 86.85
Seq: CGGGAAGTAGCTCAGCTtGGTAGAGCACTTGGTTTGGGACCAAGGGGtCGCAGGTTCGAATCCTGTCTTCCCGA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna8 (253993-254066) Length: 74 bp
Type: Pro Anticodon: TGG at 35-37 (254027-254029) Score: 86.85
Seq: CGGGAAGTAGCTCAGCTtGGTAGAGCACTTGGTTTGGGACCAAGGGGtCGCAGGTTCGAATCCTGTCTTCCCGA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna29 (532899-532973) Length: 75 bp
Type: Trp Anticodon: CCA at 34-36 (532932-532934) Score: 32.17
Seq: TGGAGCATAGATTAATTGGTAGAGCAGCGGTCTCCAAAACCATCAGTATAGGTTCAATCCCCATTGTTCGTAGCA
Str: ..>>>>>..>.>>........<<.<.>.>>>.......<<<.<....>>.>>.......<<.<<<<<<<......
chr.trna61 (2700344-2700255) Length: 90 bp
Type: Ser Anticodon: CGA at 37-39 (2700308-2700306) Score: 62.38
Seq: GGAGGATTACCCAAGTTtGGCtgAAGGGGACGGTCTCGAAAACCGTTAGGCGAGTAACATCGTGCAAGGGTTCGAATCCCTTATCCTCCG
Str: >>>>>>>..>>>.............<<<.>>>>>.......<<<<<...>>>>......<<<<..>>>>>.......<<<<<<<<<<<<.
chr.trna24 (255521-255608) Length: 88 bp
Type: Ser Anticodon: GCT at 35-37 (255555-255557) Score: 62.72
Seq: GGGGAAGTACTCAAGTGGCtgAAGAGGCGCCCCTGCTAAGGGTGTAGGTCGGGAAACCGGCGCGAGGGTTCAAATCCCTCCTTCTCCG
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<...>>>>>....<<<<<..>>>>>.......<<<<<<<<<<<<.
chr.trna33 (1023317-1023405) Length: 89 bp
Type: Ser Anticodon: GGA at 35-37 (1023351-1023353) Score: 52.99
Seq: GGAGAGTTGTCCGAGAGGCcgAAGGAGCATGATTGGAAATCATGTAGGCGGTAAACACTGTCTCAAGGGTTCGAATCCCTTACTCTCCG
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>>>....<<<<<<<.>>>>>.......<<<<<<<<<<<<.
chr.trna12 (254377-254466) Length: 90 bp
Type: Ser Anticodon: TGA at 37-39 (254413-254415) Score: 62.15
Seq: GGAGGATTACCCAAGTCcGGCtgAAGGGAACGGTCTTGAAAACCGTCAGGCGGGTAAAACCGTGCAAGGGTTCGAATCCCTTATCCTCCT
Str: >>>>>>>..>>>.............<<<.>>>>>.......<<<<<...>>>>......<<<<..>>>>>.......<<<<<<<<<<<<.
chr.trna18 (254942-255031) Length: 90 bp
Type: Ser Anticodon: TGA at 37-39 (254978-254980) Score: 62.15
Seq: GGAGGATTACCCAAGTCcGGCtgAAGGGAACGGTCTTGAAAACCGTCAGGCGGGTAAAACCGTGCAAGGGTTCGAATCCCTTATCCTCCT
Str: >>>>>>>..>>>.............<<<.>>>>>.......<<<<<...>>>>......<<<<..>>>>>.......<<<<<<<<<<<<.
chr.trna62 (2462399-2462327) Length: 73 bp
Type: Thr Anticodon: CGT at 34-36 (2462366-2462364) Score: 81.28
Seq: GCCAGCTTAGCTCAGTTGGTAGAGCAACGCACTCGTAACGCGTAGGtCGTAGGTTCGAACCCTATAGCTGGCA
Str: >>>>>>>..>>>>........<<<<.>>>>.........<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna49 (2004680-2004752) Length: 73 bp
Type: Thr Anticodon: GGT at 34-36 (2004713-2004715) Score: 79.52
Seq: GCCGCCTTAGCTCAGTTGGTAGAGCACCACCATGGTAAGGTGGGGGtCGCCGGTTCAAGCCCGGCAGGTGGCT
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna4 (253641-253716) Length: 76 bp
Type: Thr Anticodon: TGT at 34-36 (253674-253676) Score: 98.29
Seq: GCCGGCTTAGCTCAGTTGGTAGAGCATCTGATTTGTAATCAGAGGGtCGAGGGTTCAAGTCCTTTAGCCGGCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna53 (3164862-3164787) Length: 76 bp
Type: Thr Anticodon: TGT at 34-36 (3164829-3164827) Score: 98.29
Seq: GCCGGCTTAGCTCAGTTGGTAGAGCATCTGATTTGTAATCAGAGGGtCGAGGGTTCAAGTCCTTTAGCCGGCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna65 (1952046-1951975) Length: 72 bp
Type: Trp Anticodon: CCA at 34-36 (1952013-1952011) Score: 54.97
Seq: TGGGATATAGCTTAACTGGTAGAGCAGTGGTCTCCAAAACCGTCGGTATAGGTTCGACTCCTATTGTTCCAG
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.
chr.trna60 (2722769-2722698) Length: 72 bp
Type: Trp Anticodon: CCA at 34-36 (2722736-2722734) Score: 61.58
Seq: TGGAGCATAGCTTAATCGGCAGAGCAGCGGTCTCCAAAACCGTTGGTATAGGTTCGAGTCCTATTGTTCCAG
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.
chr.trna39 (1023889-1023962) Length: 74 bp
Type: Trp Anticodon: CCA at 33-35 (1023921-1023923) Score: 68.85
Seq: AGGGGCATAGTTTAAAGGTAGAACAACGGTCTCCAAAACCGTTGGTGTGGGTTCAATTCCTGCTGCCCCTGCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
chr.trna38 (1023804-1023884) Length: 81 bp
Type: Tyr Anticodon: GTA at 35-37 (1023838-1023840) Score: 72.79
Seq: GGAGGAATAGCGAAGTGGCtaAACGCGACGGACTGTAAATCCGTTCCTTAGGGTtCAGTGGTTCGAATCCACTTTCCTCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>><<<<...>>>>>.......<<<<<<<<<<<<.
chr.trna45 (1292967-1293047) Length: 81 bp
Type: Tyr Anticodon: GTA at 35-37 (1293001-1293003) Score: 72.79
Seq: GGAGGAATAGCGAAGTGGCtaAACGCGACGGACTGTAAATCCGTTCCTTAGGGTtCAGTGGTTCGAATCCACTTTCCTCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>><<<<...>>>>>.......<<<<<<<<<<<<.
chr.trna1 (253385-253457) Length: 73 bp
Type: Val Anticodon: TAC at 34-36 (253418-253420) Score: 88.04
Seq: GGAGGTTTAGCTCAGCTGGGAGAGCACCTGCCTTACAAGCAGGGGGtCAGCGGTTCGATCCCGTTAACCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna35 (1023522-1023594) Length: 73 bp
Type: Val Anticodon: TAC at 34-36 (1023555-1023557) Score: 88.04
Seq: GGAGGTTTAGCTCAGCTGGGAGAGCACCTGCCTTACAAGCAGGGGGtCAGCGGTTCGATCCCGTTAACCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna50 (3165118-3165046) Length: 73 bp
Type: Val Anticodon: TAC at 34-36 (3165085-3165083) Score: 88.04
Seq: GGAGGTTTAGCTCAGCTGGGAGAGCACCTGCCTTACAAGCAGGGGGtCAGCGGTTCGATCCCGTTAACCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
The Genomic tRNA Database is curated by Todd Lowe and Patricia Chan.
Please email lowe@soe.ucsc.edu
with any questions and comments. To submit corrections, please use our
Bug and Request Tracking System.