tRNAscan-SE Analysis of the Desulfotalea psychrophila LSv54 Genome
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| Predicted tRNA Secondary Structures |
Click on "View tRNA" buttons to view 2-D tRNA structures
Cove-predicted tRNA secondary structures rendered by
NAVIEW (c) 1988 Robert E. Bruccoleri
chr.trna51 (1217809-1217734) Length: 76 bp
Type: Ala Anticodon: GGC at 34-36 (1217776-1217774) Score: 85.79
Seq: GGGGGTATAGCTCAGCTGGGAGAGCGCGTGACTGGCAGTCACGAGGtCAGCGGTTCGATCCCGCTTACCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna48 (1462073-1461998) Length: 76 bp
Type: Ala Anticodon: TGC at 34-36 (1462040-1462038) Score: 93.84
Seq: GGGGGATTAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGtCAGCGGTTCGATCCCGCTATCCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna5 (808012-808087) Length: 76 bp
Type: Ala Anticodon: TGC at 34-36 (808045-808047) Score: 93.84
Seq: GGGGGATTAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGtCAGCGGTTCGATCCCGCTATCCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna22 (3403959-3403883) Length: 77 bp
Type: Arg Anticodon: ACG at 35-37 (3403925-3403923) Score: 89.14
Seq: GCACCAGTAGCTCAGCTGGAtAGAGTACTTGACTACGAATCAAGGAGtCGCAGGTTCGAATCCTGCCTGGTGCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna23 (3396342-3396266) Length: 77 bp
Type: Arg Anticodon: ACG at 35-37 (3396308-3396306) Score: 89.14
Seq: GCACCAGTAGCTCAGCTGGAtAGAGTACTTGACTACGAATCAAGGAGtCGCAGGTTCGAATCCTGCCTGGTGCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna12 (1305273-1305349) Length: 77 bp
Type: Arg Anticodon: CCT at 35-37 (1305307-1305309) Score: 87.09
Seq: GGTCCCGTAGCTCAGCTGGAtAGAGCATCTGCCTCCTAAGCAGAGGGtCAGGCGTTCGAATCGCCTCGGGATCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna52 (1172018-1171942) Length: 77 bp
Type: Arg Anticodon: TCG at 35-37 (1171984-1171982) Score: 90.76
Seq: GCACTCGTAGCTCAGCTGGAtAGAGCACCAGGCTTCGAACCTGGGTGtCAGGGGTTCGAATCCCTTCGGGTGCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna6 (1046821-1046897) Length: 77 bp
Type: Arg Anticodon: TCT at 35-37 (1046855-1046857) Score: 95.41
Seq: GCGCCCGTAGCTCAGCTGGAtAGAGCAACGGACTTCTAATCCGTAGGcCGCTGGTTCGAATCCAGCCGGGCGCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna57 (721424-721349) Length: 76 bp
Type: Asn Anticodon: GTT at 34-36 (721391-721389) Score: 86.12
Seq: TCCTCGGTAGCTCAGTTGGTAGAGCGGGTGACTGTTAATCACCTTGtCGGCGGTTCGAATCCGTCCCGGGGAGCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna35 (2888511-2888435) Length: 77 bp
Type: Asp Anticodon: GTC at 35-37 (2888477-2888475) Score: 90.44
Seq: GGAGTGGTAGTTCAGCTGGTtAGAATGCCGGCCTGTCACGCCGGAGGtCGCGGGTTCGAACCCCGTCCGCTCCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna27 (2889417-2889341) Length: 77 bp
Type: Asp Anticodon: GTC at 35-37 (2889383-2889381) Score: 91.30
Seq: GGAGTGGTAGTTCAGTTGGTtAGAATGCCGGCCTGTCACGCCGGAGGtCGCGGGTTCGAACCCCGTCCGCTCCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna29 (2889191-2889115) Length: 77 bp
Type: Asp Anticodon: GTC at 35-37 (2889157-2889155) Score: 91.30
Seq: GGAGTGGTAGTTCAGTTGGTtAGAATGCCGGCCTGTCACGCCGGAGGtCGCGGGTTCGAACCCCGTCCGCTCCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna31 (2888964-2888888) Length: 77 bp
Type: Asp Anticodon: GTC at 35-37 (2888930-2888928) Score: 91.30
Seq: GGAGTGGTAGTTCAGTTGGTtAGAATGCCGGCCTGTCACGCCGGAGGtCGCGGGTTCGAACCCCGTCCGCTCCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna33 (2888738-2888662) Length: 77 bp
Type: Asp Anticodon: GTC at 35-37 (2888704-2888702) Score: 91.30
Seq: GGAGTGGTAGTTCAGTTGGTtAGAATGCCGGCCTGTCACGCCGGAGGtCGCGGGTTCGAACCCCGTCCGCTCCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna37 (2888283-2888207) Length: 77 bp
Type: Asp Anticodon: GTC at 35-37 (2888249-2888247) Score: 91.30
Seq: GGAGTGGTAGTTCAGTTGGTtAGAATGCCGGCCTGTCACGCCGGAGGtCGCGGGTTCGAACCCCGTCCGCTCCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna49 (1389600-1389526) Length: 75 bp
Type: Cys Anticodon: GCA at 33-35 (1389568-1389566) Score: 77.50
Seq: GGCGACGTGGCCAAGTGGTAAGGCACTGGTCTGCAAAACCATGATtCAGCGGTTCAAATCCGCTCGTCGCCTCCA
Str: >>>>>>>..>>>.........<<<..>>>>.......<<<<......>>>>>.......<<<<<<<<<<<<....
chr.trna24 (3096676-3096602) Length: 75 bp
Type: Gln Anticodon: TTG at 33-35 (3096644-3096642) Score: 71.29
Seq: TGGGGCGTCGCCAAGCGGTAAGGCACCAGGTTTTGATCCTGGCATgCGTAGGTTCGAATCCTGCCGCCCCAGCCA
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna25 (3096416-3096342) Length: 75 bp
Type: Gln Anticodon: TTG at 33-35 (3096384-3096382) Score: 71.29
Seq: TGGGGCGTCGCCAAGCGGTAAGGCACCAGGTTTTGATCCTGGCATgCGTAGGTTCGAATCCTGCCGCCCCAGCCA
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna18 (2853780-2853854) Length: 75 bp
Type: Glu Anticodon: CTC at 34-36 (2853813-2853815) Score: 69.11
Seq: GGCCCCATCGTCTAGCGGTtAGGACGTTGGCCTCTCACGCCGAAAGCAGGGGTTCGATTCCCCTTGGGGTCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
chr.trna19 (2874486-2874560) Length: 75 bp
Type: Glu Anticodon: CTC at 34-36 (2874519-2874521) Score: 69.11
Seq: GGCCCCATCGTCTAGCGGTtAGGACGTTGGCCTCTCACGCCGAAAGCAGGGGTTCGATTCCCCTTGGGGTCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
chr.trna54 (766622-766545) Length: 78 bp
Type: Glu Anticodon: TTC at 37-39 (766586-766584) Score: 58.23
Seq: GTCCCTATCGTCTAGTCaGGTccAGGACACCGCCCTTTCACGGCGGCAACAGGGGTTCGAATCCCCTTGGGGACGCCA
Str: >>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
chr.trna56 (763192-763115) Length: 78 bp
Type: Glu Anticodon: TTC at 37-39 (763156-763154) Score: 59.52
Seq: GTCCTCATCGTCTAGTCaGGTctAGGACACCGCCCTTTCACGGCGGCAACAGGGGTTCGAATCCCCTTGGGGACGCCA
Str: >>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
chr.trna46 (1483010-1482936) Length: 75 bp
Type: Gly Anticodon: GCC at 33-35 (1482978-1482976) Score: 73.41
Seq: GCGGGAGTAACTCAGTGGTAGAGTGCAACCTTGCCAAGGTTGACGtCGCGAGTCCGAATCTCGTCTCCCGCTCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna60 (671952-671878) Length: 75 bp
Type: Gly Anticodon: GCC at 33-35 (671920-671918) Score: 73.41
Seq: GCGGGAGTAACTCAGTGGTAGAGTGCAACCTTGCCAAGGTTGACGtCGCGAGTCCGAATCTCGTCTCCCGCTCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna9 (1254007-1254082) Length: 76 bp
Type: Gly Anticodon: TCC at 34-36 (1254040-1254042) Score: 86.33
Seq: GCGGGAATAGCTCAATTGGTAGAGCATCAGCCTTCCAAGCTGAGGGtTGCGAGTCCGAGTCTCGTTTCCCGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna38 (2607832-2607756) Length: 77 bp
Type: His Anticodon: GTG at 35-37 (2607798-2607796) Score: 85.72
Seq: GTGGGCGTGGCTCAATTGGTtAGAGCACCTGGTTGTGACCCAGGAAGtCGGGGGTTCGAGTCCCCTCGCTCACCCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna17 (2426698-2426774) Length: 77 bp
Type: His Anticodon: GTG at 35-37 (2426732-2426734) Score: 87.64
Seq: GTGGGCGTGGCTCAGTTGGTtAGAGCACCTGGTTGTGACCCAGGAAGtCGGGGGTTCGAGTCCCCTCGCTCACCCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna4 (807931-808007) Length: 77 bp
Type: Ile Anticodon: GAT at 35-37 (807965-807967) Score: 100.93
Seq: GGGCCTATAGCTCAGCTGGTtAGAGCGCACGCCTGATAAGCGTGAGGtCGGTGGTTCAAATCCACCTAGGCCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna47 (1462154-1462078) Length: 77 bp
Type: Ile Anticodon: GAT at 35-37 (1462120-1462118) Score: 100.93
Seq: GGGCCTATAGCTCAGCTGGTtAGAGCGCACGCCTGATAAGCGTGAGGtCGGTGGTTCAAATCCACCTAGGCCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna61 (455538-455452) Length: 87 bp
Type: Leu Anticodon: CAA at 35-37 (455504-455502) Score: 73.76
Seq: GCCGGAGTGGTGAAATAGGTaGACGCACGGGATTCAAAATCCCGCGGGGGTAACCCCGTGTCGGTTCGATTCCGACCTCCGGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>....<<<<..>>>>>.......<<<<<<<<<<<<....
chr.trna50 (1236485-1236399) Length: 87 bp
Type: Leu Anticodon: CAG at 35-37 (1236451-1236449) Score: 67.26
Seq: GCCGAAGTGGCGGAATTGGTaGACGCGCTAGGTTCAGGGTCTAGTGGGGGTAACCCCGTGGAAGTTCGAGTCTTCTCTTCGGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>....<<<<..>>>>>.......<<<<<<<<<<<<....
chr.trna63 (109530-109446) Length: 85 bp
Type: Leu Anticodon: GAG at 35-37 (109496-109494) Score: 58.20
Seq: GCCGAAGTGGTGGAATTGGTaGACGCGCACGATTGAGGGTCGTGTGGGGCAACCCATGTCGGTTCGACCCCGACCTTCGGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>....<<<..>>>>>.......<<<<<<<<<<<<....
chr.trna64 (109206-109122) Length: 85 bp
Type: Leu Anticodon: GAG at 35-37 (109172-109170) Score: 58.20
Seq: GCCGAAGTGGTGGAATTGGTaGACGCGCACGATTGAGGGTCGTGTGGGGCAACCCATGTCGGTTCGACCCCGACCTTCGGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>....<<<..>>>>>.......<<<<<<<<<<<<....
chr.trna43 (1787980-1787894) Length: 87 bp
Type: Leu Anticodon: TAA at 35-37 (1787946-1787944) Score: 66.58
Seq: GCCTGGATGGTGGAACTGGTaGACACCCGAGACTTAAAATCTCGTGGGCTTCGGCCCGTGCGAGTTCGATTCTCGCTCTAGGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>....<<<<..>>>>>.......<<<<<<<<<<<<....
chr.trna14 (1791402-1791486) Length: 85 bp
Type: Leu Anticodon: TAG at 35-37 (1791436-1791438) Score: 71.50
Seq: GCGAGGGTGGCGGAACTGGTaGACGCACCAGACTTAGGATCTGGCGCCTTACGGTGTGGGGGTTCGACTCCCCCCTCTCGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>....<<<..>>>>>.......<<<<<<<<<<<<....
chr.trna53 (766714-766639) Length: 76 bp
Type: Lys Anticodon: TTT at 34-36 (766681-766679) Score: 87.14
Seq: GGGGCGTTAACTCAGCTGGTAGAGTATCTGACTTTTAATCAGAGAGtCGCGCGTTCGAGCCGCGCACGCCCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna55 (763275-763200) Length: 76 bp
Type: Lys Anticodon: TTT at 34-36 (763242-763240) Score: 87.14
Seq: GGGGCGTTAACTCAGCTGGTAGAGTATCTGACTTTTAATCAGAGAGtCGCGCGTTCGAGCCGCGCACGCCCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna15 (2106124-2106200) Length: 77 bp
Type: Met Anticodon: CAT at 35-37 (2106158-2106160) Score: 86.53
Seq: CGCGGGGTGGAGCAGTTtGGTAGCTCGTCGGGCTCATAACCCGAAGGtCGTTGGTTCAAATCCAGCCCCCGCTACCA
Str: .>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.....
chr.trna41 (1947022-1946946) Length: 77 bp
Type: Met Anticodon: CAT at 35-37 (1946988-1946986) Score: 86.53
Seq: CGCGGGGTGGAGCAGTTtGGTAGCTCGTCGGGCTCATAACCCGAAGGtCGTTGGTTCAAATCCAGCCCCCGCTACCA
Str: .>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.....
chr.trna42 (1946920-1946844) Length: 77 bp
Type: Met Anticodon: CAT at 35-37 (1946886-1946884) Score: 86.53
Seq: CGCGGGGTGGAGCAGTTtGGTAGCTCGTCGGGCTCATAACCCGAAGGtCGTTGGTTCAAATCCAGCCCCCGCTACCA
Str: .>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.....
chr.trna62 (204950-204874) Length: 77 bp
Type: Met Anticodon: CAT at 35-37 (204916-204914) Score: 87.19
Seq: GGCGATGTAGCTCAGTCGGTtAGAGCATACGGCTCATATCCGTAGTGtCCGGGGTTCGATTCCCTGTATCGCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna59 (694797-694721) Length: 77 bp
Type: Met Anticodon: CAT at 35-37 (694763-694761) Score: 94.61
Seq: GGGCGCATAGCTCAGTTGGTcAGAGCCACCGGCTCATAACCGGTCGGtCGTAGGTTCGAATCCTACTGCGCCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna39 (2024869-2024794) Length: 76 bp
Type: Phe Anticodon: GAA at 34-36 (2024836-2024834) Score: 90.13
Seq: GCCGGGATAGCTCAGTCGGTAGAGCAACGGACTGAAAATCCGTGTGtCCCTGGTTCGATTCCTGGTCCCGGCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>.>>.......<<.<<<<<<<<<....
chr.trna40 (2009564-2009489) Length: 76 bp
Type: Phe Anticodon: GAA at 34-36 (2009531-2009529) Score: 90.13
Seq: GCCGGGATAGCTCAGTCGGTAGAGCAACGGACTGAAAATCCGTGTGtCCCTGGTTCGATTCCTGGTCCCGGCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>.>>.......<<.<<<<<<<<<....
chr.trna45 (1586641-1586564) Length: 78 bp
Type: Pro Anticodon: GGG at 36-38 (1586606-1586604) Score: 77.59
Seq: CGGAATGTAGCGCAGCCtGGTtAGCGCACTTGTCTGGGGGACAAGGGGcCGGAGGTTCGAATCCTCTCATTCCGACCA
Str: >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna58 (721311-721234) Length: 78 bp
Type: Pro Anticodon: TGG at 36-38 (721276-721274) Score: 90.80
Seq: CGGGGCGTAGCGCAGCCtGGTtAGCGCGCCTGCCTTGGGAGCAGGAGGcCGTAGGTTCGAATCCTACCGCCCCGACCA
Str: >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna1 (363837-363930) Length: 94 bp
Type: SeC(p) Anticodon: TCA at 36-38 (363872-363874) Score: 28.39
Seq: GGAAGTGGACGGAGCaCTGGTGGCTCCCCCGGATTTCAAATCCGGTGTAACGGGTTAATAGCTCGTTAGGTGGGTTCGATTCCCATGCACTTCC
Str: >>>>>>>...>>>>>.>....<<<<<<.>>>>>.......<<<<<....>..>>.>....<.<<..<..>>>>>.......<<<<<.<<<<<<<
chr.trna3 (785913-786004) Length: 92 bp
Type: Ser Anticodon: GCT at 35-37 (785947-785949) Score: 55.10
Seq: GGAGGGGTGACCGAGAGGCcgATGGTGCTCGCCTGCTAAGCGAGTGTGGGGGTCAGACTCCACCGAGGGTTCGAATCCCTCCTCCTCCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.>>>>>>......<<<<<<.>>>>>.......<<<<<<<<<<<<....
chr.trna13 (1606558-1606643) Length: 86 bp
Type: Ser Anticodon: GGA at 35-37 (1606592-1606594) Score: 61.30
Seq: GGAGAGGTGACCGAGTGGCttAAGGTGCACGCCTGGAAAGCGTGTGTACGCAAGTACCGAGAGTTCGAATCTCTCCTTTTCCGCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>....<<<<.>>>>>.......<<<<<<<<<<<<....
chr.trna2 (785819-785904) Length: 86 bp
Type: Ser Anticodon: TGA at 35-37 (785853-785855) Score: 74.62
Seq: GGAGGAATGGCCGAGTGGTtgAAGGCGGCGGTCTTGAAAACCGTTGTACGAAAGTACCGTGGGTTCGAATCCTACTTCCTCCGCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>....<<<<.>>>>>.......<<<<<<<<<<<<....
chr.trna16 (2262518-2262593) Length: 76 bp
Type: Thr Anticodon: CGT at 34-36 (2262551-2262553) Score: 84.06
Seq: GCCAACATAGCTCAGTTGGTAGAGCGACGCTCTCGTAAAGCGTAGGcCAGCGGTTCGATCCCGCTTGTTGGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna10 (1254102-1254177) Length: 76 bp
Type: Thr Anticodon: GGT at 34-36 (1254135-1254137) Score: 92.27
Seq: GCCCACATAGCTCAGTTGGTAGAGCGCATCCTTGGTAAGGATGAGGtCACCGGTTCAACTCCGGTTGTGGGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna21 (3358582-3358657) Length: 76 bp
Type: Thr Anticodon: GGT at 34-36 (3358615-3358617) Score: 93.39
Seq: GCCCACATAGCTCAGTTGGTAGAGCGCATCCTTGGTAAGGATGAGGtCACCGGTTCGACTCCGGTTGTGGGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna7 (1253753-1253828) Length: 76 bp
Type: Thr Anticodon: TGT at 34-36 (1253786-1253788) Score: 83.47
Seq: GCTGGCGTAGCTCAACTGGAAGAGCAGCTGATTTGTAATCAGCAGGtTGCGGGTTCAAGTCCCATCGCCAGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>.>>>.......<<<.<<<<<<<<....
chr.trna11 (1255658-1255734) Length: 77 bp
Type: Trp Anticodon: CCA at 35-37 (1255692-1255694) Score: 76.45
Seq: AGGCCAGTAGCTCtAATTGGTAGAGCGCCGGATTCCAAATCCGGATGcTGGGGGTTCGAGTCCCTCCTGGCCTGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna20 (3358386-3358470) Length: 85 bp
Type: Tyr Anticodon: GTA at 35-37 (3358420-3358422) Score: 77.12
Seq: GGAGGGGTTCCCGAGTGGTtaAAGGGATCAGACTGTAAATCTGACGGCTCAGCCTtCGAAGGTTCGAATCCTTCCCCCTCCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>...<<<...>>>>>.......<<<<<<<<<<<<....
chr.trna8 (1253904-1253988) Length: 85 bp
Type: Tyr Anticodon: GTA at 35-37 (1253938-1253940) Score: 77.12
Seq: GGAGGGGTTCCCGAGTGGTtaAAGGGATCAGACTGTAAATCTGACGGCTCAGCCTtCGAAGGTTCGAATCCTTCCCCCTCCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>...<<<...>>>>>.......<<<<<<<<<<<<....
chr.trna44 (1594939-1594865) Length: 75 bp
Type: Val Anticodon: GAC at 33-35 (1594907-1594905) Score: 80.94
Seq: AGGCGCGTAGCTCAGTGGGAGAGCGCCACCTTGACGTGGTGGATGtCGGCGGTTCAATCCCGCCCGCGCCTACCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna26 (2889552-2889477) Length: 76 bp
Type: Val Anticodon: TAC at 34-36 (2889519-2889517) Score: 93.49
Seq: GGGCGACTAGCTCAGCTGGGAGAGCATCGGCCTTACAAGCCGAGGGtCACAGGTTCAAGCCCTGTGTCGCCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna28 (2889322-2889247) Length: 76 bp
Type: Val Anticodon: TAC at 34-36 (2889289-2889287) Score: 93.49
Seq: GGGCGACTAGCTCAGCTGGGAGAGCATCGGCCTTACAAGCCGAGGGtCACAGGTTCAAGCCCTGTGTCGCCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna30 (2889095-2889020) Length: 76 bp
Type: Val Anticodon: TAC at 34-36 (2889062-2889060) Score: 93.49
Seq: GGGCGACTAGCTCAGCTGGGAGAGCATCGGCCTTACAAGCCGAGGGtCACAGGTTCAAGCCCTGTGTCGCCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna32 (2888869-2888794) Length: 76 bp
Type: Val Anticodon: TAC at 34-36 (2888836-2888834) Score: 93.49
Seq: GGGCGACTAGCTCAGCTGGGAGAGCATCGGCCTTACAAGCCGAGGGtCACAGGTTCAAGCCCTGTGTCGCCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna34 (2888642-2888567) Length: 76 bp
Type: Val Anticodon: TAC at 34-36 (2888609-2888607) Score: 93.49
Seq: GGGCGACTAGCTCAGCTGGGAGAGCATCGGCCTTACAAGCCGAGGGtCACAGGTTCAAGCCCTGTGTCGCCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna36 (2888414-2888339) Length: 76 bp
Type: Val Anticodon: TAC at 34-36 (2888381-2888379) Score: 93.49
Seq: GGGCGACTAGCTCAGCTGGGAGAGCATCGGCCTTACAAGCCGAGGGtCACAGGTTCAAGCCCTGTGTCGCCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
The Genomic tRNA Database is curated by Todd Lowe and Patricia Chan.
Please email lowe@soe.ucsc.edu
with any questions and comments. To submit corrections, please use our
Bug and Request Tracking System.