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tRNAscan-SE Analysis of Caenorhabditis remanei (Mar 2006)

>> Main Overview >> tRNAs by Isotype >> tRNAs by Locus >> Secondary Structures >> tRNA Alignments >> FASTA Seqs >> Run Options/Stats >> Analysis Notes >> Genome DB >> Genome Seq

tRNAs Sorted by tRNA Isoacceptor Type plain text version [Ala] [Arg] [Asn] [Asp] [Cys] [Gln] [Glu] [Gly] [His] [Ile] [Leu] [Lys] [Met] [Phe] [Pro] [Ser] [Thr] [Trp] [Tyr] [Val] [Selenocysteine] [Possible pseudogene] [Undetermined] Sequence Name tRNA # tRNA Bounds Link to Genome Browser tRNA Isotype Anticodon Upstream Region Downstream Region Intron Bounds Scores First-Pass Scanner Begin End Begin End Total (Cove) HMM 2' Str chrUn 63 15727661 15727728 View Ala AGC ggtcagctgg taaagtttta 0 0 35.90 25.39 10.51 Eufind chrUn 194 58377555 58377626 View Ala AGC ttcgccgtgc caaaggctct 0 0 49.07 27.27 21.80 Both chrUn 619 103137892 103137821 View Ala AGC nnnnncacga gaatcttttt 0 0 64.26 39.58 24.68 Both chrUn 652 89694012 89693941 View Ala AGC tccgtcgcac gaaatcgttt 0 0 67.70 39.95 27.75 Both chrUn 126 34761211 34761282 View Ala AGC gtgtacatga gaatcttttt 0 0 69.87 40.11 29.76 Both chrUn 138 37548805 37548876 View Ala AGC cttgtcgtgc gaacgttttg 0 0 69.87 40.11 29.76 Both chrUn 141 38242564 38242635 View Ala AGC agtgtcgtgc gaatattttt 0 0 69.87 40.11 29.76 Both chrUn 227 67023833 67023904 View Ala AGC tatgccagcc gaatcttttt 0 0 69.87 40.11 29.76 Both chrUn 236 68858326 68858397 View Ala AGC agaggcatgc gaattttttt 0 0 69.87 40.11 29.76 Both chrUn 237 68860030 68860101 View Ala AGC ggagatatgc gaaacgtttt 0 0 69.87 40.11 29.76 Both chrUn 24 2078625 2078696 View Ala AGC atggtcgtgc gaatattttt 0 0 69.87 40.11 29.76 Both chrUn 281 80457718 80457789 View Ala AGC ttcgccgcac gaatcttttt 0 0 69.87 40.11 29.76 Both chrUn 532 131563653 131563582 View Ala AGC ttcgccgcac gaatcttttt 0 0 69.87 40.11 29.76 Both chrUn 650 89696113 89696042 View Ala AGC catcttgtgc gaaacatttt 0 0 69.87 40.11 29.76 Both chrUn 651 89695075 89695004 View Ala AGC atttctgtgc gaatcttttt 0 0 69.87 40.11 29.76 Both chrUn 680 84226056 84225985 View Ala AGC ttcgacgtgc gaaatctttt 0 0 69.87 40.11 29.76 Both chrUn 695 81538416 81538345 View Ala AGC gacaatcgcc gaatcttttt 0 0 69.87 40.11 29.76 Both chrUn 769 58386015 58385944 View Ala AGC ttcgccgttc gaatcttttc 0 0 69.87 40.11 29.76 Both chrUn 770 58380161 58380090 View Ala AGC ttcgccgtgc gaaatttttt 0 0 69.87 40.11 29.76 Both chrUn 800 49799304 49799233 View Ala AGC gttgacatgc gaaacgtttt 0 0 69.87 40.11 29.76 Both chrUn 828 38153549 38153478 View Ala AGC atagatatgc gaatcttttt 0 0 69.87 40.11 29.76 Both chrUn 829 38143898 38143827 View Ala AGC ttggtcgtgc gaatcttttt 0 0 69.87 40.11 29.76 Both chrUn 868 27663347 27663276 View Ala AGC ttttgccgcc gaaacttttt 0 0 69.87 40.11 29.76 Both chrUn 916 14185196 14185125 View Ala AGC tgagacgtgc gaatattttt 0 0 69.87 40.11 29.76 Both chrUn 917 14157869 14157798 View Ala AGC tgagacgtgc gaatacgttt 0 0 69.87 40.11 29.76 Both chrUn 957 2113534 2113463 View Ala AGC cttcatatgc agaagttttt 0 0 69.87 40.11 29.76 Both chrUn 425 119594569 119594640 View Ala CGC ctccgccggc aatctctttt 0 0 68.91 39.15 29.76 Both chrUn 589 110690841 110690770 View Ala CGC ttcggccggc aatatctttt 0 0 68.91 39.15 29.76 Both chrUn 744 65896195 65896124 View Ala CGC ttcggtcggc aatctctttt 0 0 68.91 39.15 29.76 Both chrUn 703 79121858 79121787 View Ala CGC gtcaagcggc aatctctttt 0 0 73.02 45.56 27.46 Both chrUn 203 62335730 62335801 View Ala CGC ctttcccgtc aatctctttt 0 0 76.66 53.19 23.47 Both chrUn 963 1231238 1231167 View Ala CGC ctcgttcacc aatccctttt 0 0 76.66 53.19 23.47 Both chrUn 333 91959047 91959128 View Ala GGC tcctggttgc tatgattaca 91959084 91959093 29.79 24.59 5.20 Eufind chrUn 136 37227989 37228060 View Ala TGC ttataactgt gggagttttt 0 0 72.66 45.20 27.46 Both chrUn 140 38242396 38242467 View Ala TGC ttcactgtgc gaaatctttt 0 0 72.66 45.20 27.46 Both chrUn 28 3038817 3038888 View Ala TGC aatctctcgt gatattcttt 0 0 72.66 45.20 27.46 Both chrUn 320 87828365 87828436 View Ala TGC tcaagaccgt gttttttttt 0 0 72.66 45.20 27.46 Both chrUn 34 4570703 4570774 View Ala TGC tttcatgtgc gtaacttttt 0 0 72.66 45.20 27.46 Both chrUn 443 125227123 125227194 View Ala TGC tttctcaagt gatatgcttt 0 0 72.66 45.20 27.46 Both chrUn 459 135549913 135549984 View Ala TGC gcctgaccgt gttaattttt 0 0 72.66 45.20 27.46 Both chrUn 463 137692275 137692346 View Ala TGC agttaatgtc gataactttt 0 0 72.66 45.20 27.46 Both chrUn 526 135552311 135552240 View Ala TGC tcccgaccgt gttaattttt 0 0 72.66 45.20 27.46 Both chrUn 583 115669640 115669569 View Ala TGC ctacggcagt gttatctttt 0 0 72.66 45.20 27.46 Both chrUn 621 102027576 102027505 View Ala TGC ttctccacgt gattcacttt 0 0 72.66 45.20 27.46 Both chrUn 622 102017657 102017586 View Ala TGC ttcttcacgt gattcacttt 0 0 72.66 45.20 27.46 Both chrUn 659 87831849 87831778 View Ala TGC tcctgaacgt gttaattttt 0 0 72.66 45.20 27.46 Both   chrUn 149 41031395 41031462 View Arg ACG aattcgatgt aatttttttt 0 0 40.78 28.86 11.92 Eufind chrUn 542 126450591 126450520 View Arg ACG cgacgcgatt aaactttttt 0 0 50.76 44.09 6.67 Eufind chrUn 261 76352004 76352076 View Arg ACG ttcgaaacgt aaactttttt 0 0 58.10 48.34 9.76 Eufind chrUn 782 55961415 55961343 View Arg ACG gttcccatct aaacactttt 0 0 58.87 52.98 5.89 Eufind chrUn 615 104772118 104772046 View Arg ACG tctcccgtct aaactttttc 0 0 64.02 54.86 9.16 Both chrUn 927 9497160 9497088 View Arg ACG tgcgacatct aaacgttttg 0 0 69.72 56.87 12.85 Both chrUn 811 45626751 45626679 View Arg ACG tagaatgtgt aaactttttt 0 0 70.80 54.55 16.25 Both chrUn 107 31238597 31238669 View Arg ACG ctgtttcaca aaatcttttt 0 0 71.61 57.29 14.32 Both chrUn 162 47198539 47198611 View Arg ACG aacaaaatgt aaacattttt 0 0 71.61 57.29 14.32 Both chrUn 166 48798607 48798679 View Arg ACG tcagagcagg aaacgctttt 0 0 71.61 57.29 14.32 Both chrUn 2 23144 23216 View Arg ACG tgcgaaatga aaattttttt 0 0 71.61 57.29 14.32 Both chrUn 21 1461636 1461708 View Arg ACG tcttttgcgt aaacttttta 0 0 71.61 57.29 14.32 Both chrUn 259 76348625 76348697 View Arg ACG atcaaatcgt aaacggtttt 0 0 71.61 57.29 14.32 Both chrUn 274 78532802 78532874 View Arg ACG gttgaaatgt aaactctttt 0 0 71.61 57.29 14.32 Both chrUn 413 115729213 115729285 View Arg ACG acaaaaatgt aaaggttttg 0 0 71.61 57.29 14.32 Both chrUn 635 98726848 98726776 View Arg ACG tcaaatatct aaatcctttt 0 0 71.61 57.29 14.32 Both chrUn 679 84622504 84622432 View Arg ACG gaaaaattgt agacgttttg 0 0 71.61 57.29 14.32 Both chrUn 705 78521418 78521346 View Arg ACG gcaaatgtgt aaactttttt 0 0 71.61 57.29 14.32 Both chrUn 747 63832067 63831995 View Arg ACG tttttcgtct aaattttttg 0 0 71.61 57.29 14.32 Both chrUn 781 55962072 55962000 View Arg ACG atagccatga aaattttttt 0 0 71.61 57.29 14.32 Both chrUn 812 45621303 45621231 View Arg ACG tagaacgtgt aaacattttt 0 0 71.61 57.29 14.32 Both chrUn 88 24814224 24814296 View Arg ACG agaaaaatgt aaactttttt 0 0 71.61 57.29 14.32 Both chrUn 897 21830488 21830416 View Arg ACG tgaaagatgt aaaatatttt 0 0 71.61 57.29 14.32 Both chrUn 511 145672084 145672011 View Arg ACG tcaagacgtc ccaacttgat 0 0 71.99 47.36 24.63 Both chrUn 524 136902684 136902612 View Arg ACG tctcccgtct aaactttttc 0 0 74.17 59.85 14.32 Both chrUn 260 76350138 76350210 View Arg ACG ttgaaaatgt aaactctttt 0 0 75.91 58.60 17.31 Both chrUn 29 3099809 3099881 View Arg ACG gattccacct aaactttttt 0 0 75.91 58.60 17.31 Both chrUn 780 55983442 55983370 View Arg ACG catttcatct aaatcttttt 0 0 75.91 58.60 17.31 Both chrUn 837 37104043 37103972 View Arg CCG tgttgagtgt atacgttttg 0 0 49.29 41.25 8.04 Both chrUn 148 40658278 40658349 View Arg CCG tatcaagtgt attagttttt 0 0 54.98 42.94 12.04 Both chrUn 888 23853810 23853727 View Arg CCT tcctctcgtc aatgattttt 0 0 47.84 24.89 22.95 Both chrUn 505 147474891 147474819 View Arg CCT tttgcttatt caattgaaga 0 0 57.55 49.08 8.47 Both chrUn 133 36818773 36818845 View Arg CCT cttccttcgt aaatcttttg 0 0 69.17 50.75 18.42 Both chrUn 226 66884794 66884866 View Arg CCT ctacgcccgt ttactttttt 0 0 69.56 51.48 18.08 Both chrUn 692 81680417 81680345 View Arg TCG ccaaaagtgt aaatcttttt 0 0 65.73 53.93 11.80 Both chrUn 766 59498345 59498273 View Arg TCG aagaagacgt aaatcttttt 0 0 67.47 53.70 13.77 Both chrUn 369 104135666 104135738 View Arg TCG ggcagaatgt aaactttttt 0 0 72.84 56.77 16.07 Both chrUn 370 104163638 104163710 View Arg TCG ggcagaatgt aaactttttt 0 0 72.84 56.77 16.07 Both chrUn 200 61109450 61109522 View Arg TCG tttcgaatgt aaactttttt 0 0 73.16 56.41 16.75 Both chrUn 254 73635332 73635404 View Arg TCG agagaagtgt aaatcttttt 0 0 73.16 56.41 16.75 Both chrUn 367 102542832 102542904 View Arg TCG ggtcaaatgt aaacattttg 0 0 73.16 56.41 16.75 Both chrUn 693 81679105 81679033 View Arg TCG tgttcagtgt aaatcttttt 0 0 73.16 56.41 16.75 Both chrUn 818 43314697 43314625 View Arg TCG agaaaaatgg acatcttttg 0 0 73.16 56.41 16.75 Both chrUn 971 343589 343517 View Arg TCG ttgtctttgt aaaatttttt 0 0 73.16 56.41 16.75 Both chrUn 47 11727788 11727860 View Arg TCG ggttagacgt aaatcttttg 0 0 73.42 56.91 16.51 Both chrUn 922 11724873 11724801 View Arg TCG ggttagacgt aaatcttttg 0 0 73.42 56.91 16.51 Both chrUn 566 121381229 121381156 View Arg TCT gacaattttt aaacttttgg 0 0 33.99 25.95 8.04 Eufind chrUn 595 106271753 106271681 View Arg TCT ttttccttgt gatctttttt 0 0 68.13 58.97 9.16 Eufind chrUn 596 106242674 106242602 View Arg TCT ttttctctgc gaattttttt 0 0 68.21 57.81 10.40 Eufind chrUn 130 35445293 35445365 View Arg TCT tgtcaaccgt aatatttttg 0 0 72.93 58.95 13.98 Both chrUn 241 70033545 70033617 View Arg TCT ggacactcgt aatctttttg 0 0 72.93 58.95 13.98 Both chrUn 242 70034119 70034191 View Arg TCT tttctatcgt aatcttttta 0 0 72.93 58.95 13.98 Both chrUn 544 126024890 126024818 View Arg TCT tgtcaaccgt aatatttttg 0 0 72.93 58.95 13.98 Both chrUn 704 79010741 79010669 View Arg TCT atcgaaacgt aatcttttat 0 0 72.93 58.95 13.98 Both chrUn 746 63894380 63894308 View Arg TCT aggcaatcgt aatctttttg 0 0 72.93 58.95 13.98 Both chrUn 76 21203299 21203371 View Arg TCT gctcgatcgt aatgttttgg 0 0 72.93 58.95 13.98 Both chrUn 775 57576872 57576800 View Arg TCT ccgctctcgt aatgtttttt 0 0 72.93 58.95 13.98 Both chrUn 854 32772696 32772624 View Arg TCT tgtacatcgt aatatttttg 0 0 72.93 58.95 13.98 Both chrUn 599 105856253 105856181 View Arg TCT acttgctcgt gtacttttaa 0 0 74.31 60.34 13.97 Both chrUn 518 140545257 140545185 View Arg TCT cgaagtaccc ctcttccagg 0 0 81.96 68.64 13.32 Both   Sequence Name tRNA # tRNA Bounds Link to Genome Browser tRNA Isotype Anticodon Upstream Region Downstream Region Intron Bounds Scores First-Pass Scanner Begin End Begin End Total (Cove) HMM 2' Str chrUn 919 13110897 13110813 View Asn ATT cagactcacc taggtgtttt 0 0 52.09 22.35 29.74 Eufind chrUn 958 1694432 1694360 View Asn GTT ggggccagca gtttattctt 0 0 66.77 47.93 18.84 Both chrUn 143 38846515 38846587 View Asn GTT gacacagcat aaatcttttt 0 0 73.73 50.90 22.83 Both chrUn 144 38852577 38852649 View Asn GTT cggaaatcgt aaaactttta 0 0 73.73 50.90 22.83 Both chrUn 228 67257518 67257590 View Asn GTT tttatcgtgt aaactttttt 0 0 73.73 50.90 22.83 Both chrUn 243 70047053 70047125 View Asn GTT gggtctgtgt aaatcttttt 0 0 73.73 50.90 22.83 Both chrUn 296 82948778 82948850 View Asn GTT cctatcgtgt aaactttttt 0 0 73.73 50.90 22.83 Both chrUn 298 83036794 83036866 View Asn GTT tcggtcacct aaaatttttg 0 0 73.73 50.90 22.83 Both chrUn 301 83368653 83368725 View Asn GTT gtagaatcgt aaactttttt 0 0 73.73 50.90 22.83 Both chrUn 387 107739527 107739599 View Asn GTT gggtacatga aaactttttg 0 0 73.73 50.90 22.83 Both chrUn 644 94598482 94598410 View Asn GTT ctctttcgtg aaacattttt 0 0 73.73 50.90 22.83 Both chrUn 68 17932791 17932863 View Asn GTT ggaaacgccc aaactctttt 0 0 73.73 50.90 22.83 Both chrUn 684 83013415 83013343 View Asn GTT tccgccgact aaactctttt 0 0 73.73 50.90 22.83 Both chrUn 685 82936106 82936034 View Asn GTT tctatcgtgt aaaccttttt 0 0 73.73 50.90 22.83 Both chrUn 718 72489964 72489892 View Asn GTT tcgctcgccg aaactttttt 0 0 73.73 50.90 22.83 Both chrUn 806 47631327 47631255 View Asn GTT ttcgaatcgt aaactttttt 0 0 73.73 50.90 22.83 Both chrUn 861 30890594 30890522 View Asn GTT tgttccacct aaaatttttg 0 0 73.73 50.90 22.83 Both chrUn 862 30858293 30858221 View Asn GTT gggactcgct aaactttttt 0 0 73.73 50.90 22.83 Both chrUn 863 30491460 30491388 View Asn GTT tctctaatgt aaactttttt 0 0 73.73 50.90 22.83 Both chrUn 913 15954683 15954611 View Asn GTT ctgaaaccgt aaaattttga 0 0 73.73 50.90 22.83 Both chrUn 936 7529918 7529846 View Asn GTT gaaaaaccgt aaacttttta 0 0 73.73 50.90 22.83 Both chrUn 937 7523912 7523840 View Asn GTT tgaaaaccgt aaatcttttt 0 0 73.73 50.90 22.83 Both chrUn 302 83378620 83378692 View Asn GTT tagcggccgt aaattttttt 0 0 77.24 54.40 22.84 Both   chrUn 886 24647116 24647045 View Asp GTC gactttgcgc accttttttg 0 0 33.70 18.12 15.58 Eufind chrUn 455 133397494 133397565 View Asp GTC actaggttat tagaaactca 0 0 33.84 21.57 12.27 Eufind chrUn 197 60028796 60028867 View Asp GTC actaggttat tagaaactca 0 0 35.59 23.90 11.69 Eufind chrUn 345 97884638 97884709 View Asp GTC ccagcggttt aatctttttt 0 0 50.14 39.04 11.10 Eufind chrUn 636 97891831 97891760 View Asp GTC tttgcggtct aaatattttt 0 0 50.14 39.04 11.10 Eufind chrUn 516 140891716 140891645 View Asp GTC ctccgacgtg aaatcttttg 0 0 53.72 32.19 21.53 Eufind chrUn 527 135196585 135196514 View Asp GTC ggtctccgtg aagcgttttn 0 0 57.16 38.62 18.54 Both chrUn 597 105953982 105953911 View Asp GTC ttctttcgtg aaatcttttt 0 0 60.34 40.11 20.23 Both chrUn 159 45649107 45649178 View Asp GTC ttctatcatg aaatttttaa 0 0 60.48 35.79 24.69 Both chrUn 105 30494043 30494114 View Asp GTC tgccaatgtg aaatcttttt 0 0 66.04 41.34 24.70 Both chrUn 146 40387208 40387279 View Asp GTC ctctcatgtg aaatcttttt 0 0 66.04 41.34 24.70 Both chrUn 216 64154245 64154316 View Asp GTC ctttgatgtg aaatctattt 0 0 66.04 41.34 24.70 Both chrUn 314 85536238 85536309 View Asp GTC ctaactcgtg aaacttttta 0 0 66.04 41.34 24.70 Both chrUn 342 97870362 97870433 View Asp GTC ctccggcgtg aaatcttttt 0 0 66.04 41.34 24.70 Both chrUn 343 97871986 97872057 View Asp GTC cctcggcgtg aaatcgtttt 0 0 66.04 41.34 24.70 Both chrUn 344 97873334 97873405 View Asp GTC cttcgccgtg aaatcttttt 0 0 66.04 41.34 24.70 Both chrUn 346 97885700 97885771 View Asp GTC gtccgatgtg aattcttttt 0 0 66.04 41.34 24.70 Both chrUn 347 97886954 97887025 View Asp GTC ctccgacgtg aaatcttttt 0 0 66.04 41.34 24.70 Both chrUn 348 97889874 97889945 View Asp GTC ctccggcgtg aaacattttt 0 0 66.04 41.34 24.70 Both chrUn 400 110739436 110739507 View Asp GTC tattcccgtg aaactttttt 0 0 66.04 41.34 24.70 Both chrUn 401 110767461 110767532 View Asp GTC gtctcccgtg aaatcttttt 0 0 66.04 41.34 24.70 Both chrUn 477 150728039 150728110 View Asp GTC ttttctcgtg aatcgttttt 0 0 66.04 41.34 24.70 Both chrUn 503 147565274 147565203 View Asp GTC ctccgacatg aacattttgt 0 0 66.04 41.34 24.70 Both chrUn 504 147564023 147563952 View Asp GTC ttccgacgtg aaatcttttt 0 0 66.04 41.34 24.70 Both chrUn 509 145921779 145921708 View Asp GTC ctctgctgtg aaatcttttt 0 0 66.04 41.34 24.70 Both chrUn 517 140890467 140890396 View Asp GTC tttcgccgtg aaatcttttt 0 0 66.04 41.34 24.70 Both chrUn 529 134360772 134360701 View Asp GTC tttcctcgtg aatcgttttt 0 0 66.04 41.34 24.70 Both chrUn 530 134152450 134152379 View Asp GTC ttttctcgtg aatctttttt 0 0 66.04 41.34 24.70 Both chrUn 537 128678109 128678038 View Asp GTC ttctctcgtg aattgttttt 0 0 66.04 41.34 24.70 Both chrUn 634 98792213 98792142 View Asp GTC ctcttatgtg aatatttttt 0 0 66.04 41.34 24.70 Both chrUn 660 87578854 87578783 View Asp GTC ttctctcgtg aaacgttttt 0 0 66.04 41.34 24.70 Both chrUn 715 73791121 73791050 View Asp GTC tcacaatgtg aatatttttt 0 0 66.04 41.34 24.70 Both chrUn 809 45650940 45650869 View Asp GTC ttctgtcatg aatatgtttt 0 0 66.04 41.34 24.70 Both chrUn 810 45643108 45643037 View Asp GTC ttctctcgtg aaatattctt 0 0 66.04 41.34 24.70 Both chrUn 84 24651452 24651523 View Asp GTC ttctctcgta aaatcttttt 0 0 66.04 41.34 24.70 Both chrUn 845 33717985 33717914 View Asp GTC tcttccatcg aacatttttt 0 0 66.04 41.34 24.70 Both chrUn 867 28894076 28894005 View Asp GTC gttttccgtg aaaacttttt 0 0 66.04 41.34 24.70 Both chrUn 885 24652765 24652694 View Asp GTC atttctcgtg aaatcttttt 0 0 66.04 41.34 24.70 Both chrUn 940 5870291 5870220 View Asp GTC tgttgatgtg aaatcttttt 0 0 66.04 41.34 24.70 Both   chrUn 39 6328120 6328207 View Cys GCA tcgttttcgt aaataccttt 0 0 23.56 13.70 9.86 Eufind chrUn 195 58577724 58577795 View Cys GCA actttcatcg aaatactttt 0 0 70.52 52.77 17.75 Both chrUn 198 60175285 60175356 View Cys GCA tgattctcgt aaatactttt 0 0 70.52 52.77 17.75 Both chrUn 205 62895415 62895486 View Cys GCA gtcaaacatc aaatatcttt 0 0 70.52 52.77 17.75 Both chrUn 206 62895630 62895701 View Cys GCA attctcaagc aaatatcttt 0 0 70.52 52.77 17.75 Both chrUn 229 67949896 67949967 View Cys GCA acttccatgt aaatactttt 0 0 70.52 52.77 17.75 Both chrUn 37 6083893 6083964 View Cys GCA catctctcat agattctttt 0 0 70.52 52.77 17.75 Both chrUn 38 6278035 6278106 View Cys GCA gtacgaatgt aaaaactttt 0 0 70.52 52.77 17.75 Both chrUn 385 106952164 106952235 View Cys GCA ttttatcggt aaatactttt 0 0 70.52 52.77 17.75 Both chrUn 454 133266165 133266236 View Cys GCA nnnnnnnnnt aaatactttt 0 0 70.52 52.77 17.75 Both chrUn 735 67891206 67891135 View Cys GCA ctcgccgtgt aaatgatttt 0 0 70.52 52.77 17.75 Both chrUn 892 22102719 22102648 View Cys GCA ctttccatgt agaattttta 0 0 70.52 52.77 17.75 Both chrUn 721 70338462 70338391 View Cys GCA ttcatcacct acttcttttt 0 0 71.06 51.98 19.08 Both chrUn 722 70329089 70329018 View Cys GCA gtcattatgt acttctttta 0 0 71.06 51.98 19.08 Both chrUn 723 70328749 70328678 View Cys GCA tattttgtgt actttctttt 0 0 71.06 51.98 19.08 Both   chrUn 497 153525780 153525710 View Gln CTG ctcagcgtgc ccagccccgc 0 0 46.58 24.87 21.71 Both chrUn 543 126352381 126352310 View Gln CTG atctcaccat caaagtaaaa 0 0 47.58 14.62 32.96 Both chrUn 666 85434452 85434381 View Gln CTG cggtttgcct ttcttttttg 0 0 62.80 49.97 12.83 Eufind chrUn 11 654748 654819 View Gln CTG ctcttttgtc atcgtttttt 0 0 74.41 51.47 22.94 Both chrUn 763 60860599 60860528 View Gln CTG cttttccgtc agcgcttttg 0 0 74.41 51.47 22.94 Both chrUn 882 24808819 24808748 View Gln CTG gtttcccggc atcgtttttt 0 0 74.41 51.47 22.94 Both chrUn 9 642548 642619 View Gln CTG gtgtgtgtgc atcgtttttg 0 0 74.41 51.47 22.94 Both chrUn 928 9379785 9379714 View Gln CTG ccattccgtc atcgttttgt 0 0 74.41 51.47 22.94 Both chrUn 87 24808073 24808144 View Gln CTG ctgcgccgtc atcgtttttt 0 0 76.86 53.92 22.94 Both chrUn 896 21833016 21832945 View Gln CTG cttcgccggc atcgcttttg 0 0 76.86 53.92 22.94 Both chrUn 755 62635825 62635755 View Gln TTG gagttctgct caaatatttt 0 0 22.93 17.68 5.25 Eufind chrUn 469 146820625 146820696 View Gln TTG cttcgccacc ctcgtttttt 0 0 68.68 49.78 18.90 Both chrUn 247 70243949 70244020 View Gln TTG agcactgtag atcttttcaa 0 0 69.56 50.42 19.14 Both chrUn 244 70238418 70238489 View Gln TTG catgccgcaa atctcttttt 0 0 74.78 50.13 24.65 Both chrUn 245 70242674 70242745 View Gln TTG cataccgcaa attctttttg 0 0 74.78 50.13 24.65 Both chrUn 246 70243196 70243267 View Gln TTG agcaccgtag atcttttgaa 0 0 74.78 50.13 24.65 Both chrUn 248 70245357 70245428 View Gln TTG cataccacaa atattttttc 0 0 74.78 50.13 24.65 Both chrUn 313 85442553 85442624 View Gln TTG gtgatcgccc atcgtttttg 0 0 74.78 50.13 24.65 Both chrUn 330 90735578 90735649 View Gln TTG cttcgccacc atcgtttttt 0 0 74.78 50.13 24.65 Both chrUn 396 109232407 109232478 View Gln TTG tttctccgtc atcgtttttt 0 0 74.78 50.13 24.65 Both chrUn 410 112704082 112704153 View Gln TTG tctcccgggt atcgtttttt 0 0 74.78 50.13 24.65 Both chrUn 414 115729930 115730001 View Gln TTG tgcgcccgtc atcgtttttt 0 0 74.78 50.13 24.65 Both chrUn 471 148949465 148949536 View Gln TTG ccgcctcgtc atcgtttttt 0 0 74.78 50.13 24.65 Both chrUn 578 117009102 117009031 View Gln TTG tccgccgtcc atcgtttttt 0 0 74.78 50.13 24.65 Both chrUn 6 483613 483684 View Gln TTG gtctccgtgc atcgtttttt 0 0 74.78 50.13 24.65 Both chrUn 641 96474478 96474407 View Gln TTG gcgcctcgtc atggtttttt 0 0 74.78 50.13 24.65 Both chrUn 69 18559955 18560026 View Gln TTG ttttcccgtc atcgcttttt 0 0 74.78 50.13 24.65 Both chrUn 785 52987346 52987275 View Gln TTG tcaaaaatgt atgtcttttt 0 0 74.78 50.13 24.65 Both chrUn 825 40456454 40456383 View Gln TTG gagtgtgtgc atcgtttttt 0 0 74.78 50.13 24.65 Both chrUn 909 18565611 18565540 View Gln TTG ttttctggtc atcgtttttt 0 0 74.78 50.13 24.65 Both chrUn 931 8398114 8398043 View Gln TTG ctcgaaatgt atcgtttttt 0 0 74.78 50.13 24.65 Both chrUn 967 655976 655905 View Gln TTG actttcgtgc atcttttttt 0 0 74.78 50.13 24.65 Both   Sequence Name tRNA # tRNA Bounds Link to Genome Browser tRNA Isotype Anticodon Upstream Region Downstream Region Intron Bounds Scores First-Pass Scanner Begin End Begin End Total (Cove) HMM 2' Str chrUn 740 66337664 66337592 View Glu CTC cgcacgccaa tttccttttt 0 0 52.62 31.23 21.39 Eufind chrUn 289 81540660 81540731 View Glu CTC tgttccacca gacgcttttt 0 0 66.05 38.49 27.56 Eufind chrUn 22 1572463 1572534 View Glu CTC ttctgtcgtc gtcacttttt 0 0 78.97 53.72 25.25 Both chrUn 112 33239183 33239254 View Glu CTC gtattctatc tatctttttt 0 0 80.86 53.32 27.54 Both chrUn 191 57901538 57901609 View Glu CTC tttttcatcc tgatcttttt 0 0 80.86 53.32 27.54 Both chrUn 192 57902406 57902477 View Glu CTC ttttccatcc taatattttt 0 0 80.86 53.32 27.54 Both chrUn 221 66335961 66336032 View Glu CTC ttccccacgc gatctctttt 0 0 80.86 53.32 27.54 Both chrUn 222 66340545 66340616 View Glu CTC ttctccacgc gatttctttt 0 0 80.86 53.32 27.54 Both chrUn 223 66342344 66342415 View Glu CTC ttatccacgc gattcttttt 0 0 80.86 53.32 27.54 Both chrUn 30 3558692 3558763 View Glu CTC ttcaaacatc tatttttttc 0 0 80.86 53.32 27.54 Both chrUn 357 99596197 99596268 View Glu CTC ctctcaccgc gatgcttttt 0 0 80.86 53.32 27.54 Both chrUn 36 5690061 5690132 View Glu CTC ataaagtgtc taactttttt 0 0 80.86 53.32 27.54 Both chrUn 58 15045539 15045610 View Glu CTC ttttccatgc gatgcgtttt 0 0 80.86 53.32 27.54 Both chrUn 59 15046276 15046347 View Glu CTC attcccacgc gacttttttg 0 0 80.86 53.32 27.54 Both chrUn 630 99590833 99590762 View Glu CTC ttgtcaccgc gatgcttttt 0 0 80.86 53.32 27.54 Both chrUn 649 90734822 90734751 View Glu CTC agaaatcatc gaatcatttt 0 0 80.86 53.32 27.54 Both chrUn 671 85194392 85194321 View Glu CTC ctctttcatc gaagtttttt 0 0 80.86 53.32 27.54 Both chrUn 698 80374293 80374222 View Glu CTC tctttcacgc gatttctttt 0 0 80.86 53.32 27.54 Both chrUn 701 79963674 79963603 View Glu CTC ctttttcatc tatctttttt 0 0 80.86 53.32 27.54 Both chrUn 738 66355181 66355110 View Glu CTC ttctccacgc gatttatttt 0 0 80.86 53.32 27.54 Both chrUn 773 57903247 57903176 View Glu CTC tctctcatcc taaatttttt 0 0 80.86 53.32 27.54 Both chrUn 860 31102723 31102652 View Glu CTC ctttcacatc taccgttttt 0 0 80.86 53.32 27.54 Both chrUn 165 48478915 48478985 View Glu TTC ctcctcgtcc gtttcttcta 0 0 70.19 45.19 25.00 Both chrUn 321 87853700 87853771 View Glu TTC gtggcggact gtttcttttt 0 0 72.03 54.35 17.68 Both chrUn 591 108787488 108787417 View Glu TTC ccagcggttc gtttcttttt 0 0 72.03 54.35 17.68 Both chrUn 110 31648292 31648363 View Glu TTC acactcacca gtttcttttt 0 0 79.04 54.46 24.58 Both chrUn 325 88164575 88164646 View Glu TTC ttccccgtcc gtttcttttt 0 0 79.04 54.46 24.58 Both chrUn 326 88302557 88302628 View Glu TTC ctttccgtcc gtttcttttt 0 0 79.04 54.46 24.58 Both chrUn 365 101857671 101857742 View Glu TTC tccctcgtcc gtttcttttt 0 0 79.04 54.46 24.58 Both chrUn 376 105131745 105131816 View Glu TTC tcactcatag gtttcctttt 0 0 79.04 54.46 24.58 Both chrUn 392 108788807 108788878 View Glu TTC tttcccgtcc gtttattttt 0 0 79.04 54.46 24.58 Both chrUn 393 108840685 108840756 View Glu TTC tttctcgtcc gtttcttttt 0 0 79.04 54.46 24.58 Both chrUn 442 124852358 124852429 View Glu TTC ttcctcgtcc gttaattttt 0 0 79.04 54.46 24.58 Both chrUn 464 138048098 138048169 View Glu TTC ttttccgtcc gtttcttttt 0 0 79.04 54.46 24.58 Both chrUn 500 149178306 149178235 View Glu TTC ttcctcgtcc gttaattttt 0 0 79.04 54.46 24.58 Both chrUn 548 124852125 124852054 View Glu TTC ttccccgtcc gtttcttttt 0 0 79.04 54.46 24.58 Both chrUn 56 14064011 14064082 View Glu TTC ggatgtcaga gtttcttttt 0 0 79.04 54.46 24.58 Both chrUn 577 117268421 117268350 View Glu TTC cacctcgtcc gtttcttttt 0 0 79.04 54.46 24.58 Both chrUn 582 115694530 115694459 View Glu TTC ttcctcgtcc gttaattttt 0 0 79.04 54.46 24.58 Both chrUn 657 88164294 88164223 View Glu TTC ttcctcgtcc gttaattctt 0 0 79.04 54.46 24.58 Both chrUn 709 77075761 77075690 View Glu TTC ctcctcgtcc gtttcttttt 0 0 79.04 54.46 24.58 Both chrUn 710 77073505 77073434 View Glu TTC ctcctcgtcc gtttcttttt 0 0 79.04 54.46 24.58 Both chrUn 774 57750012 57749941 View Glu TTC tcctttgtcc gtttcttttt 0 0 79.04 54.46 24.58 Both chrUn 93 26111587 26111658 View Glu TTC tttttgccgc gtctagtttt 0 0 79.04 54.46 24.58 Both chrUn 938 6738505 6738434 View Glu TTC acctgtgtcc gttatttttt 0 0 79.04 54.46 24.58 Both chrUn 948 4534467 4534396 View Glu TTC atactcatag gttctttttt 0 0 79.04 54.46 24.58 Both   chrUn 512 144391867 144391797 View Gly CCC gcccggcact ccgacacgag 0 0 65.54 38.81 26.73 Both chrUn 72 19288860 19288941 View Gly CCC ttctcagacc aatctttttt 0 0 66.77 39.30 27.47 Both chrUn 899 19671121 19671039 View Gly CCC cagatcacct aatccttttg 0 0 74.11 38.97 35.14 Both chrUn 900 19325044 19324962 View Gly CCC cagatcgccc aattcttttt 0 0 74.11 38.97 35.14 Both chrUn 901 19323134 19323052 View Gly CCC cagatcgtcc aatctttttt 0 0 74.11 38.97 35.14 Both chrUn 902 19286759 19286678 View Gly CCC ttctcagacc aacccttttt 0 0 75.23 43.05 32.18 Both chrUn 628 99696380 99696310 View Gly GCC ctctcactgg aaacattttt 0 0 23.57 11.38 12.19 Eufind chrUn 661 86534396 86534326 View Gly GCC aaaagaatag ccatgtggag 0 0 65.01 55.64 9.37 Both chrUn 576 118300068 118299998 View Gly GCC tattttcgat ccatattttc 0 0 70.70 55.06 15.64 Both chrUn 823 40783186 40783116 View Gly GCC tccagataaa ccatatgatg 0 0 70.70 55.06 15.64 Both chrUn 65 17157144 17157214 View Gly GCC agatttcatc attgttttgc 0 0 70.72 55.08 15.64 Both chrUn 327 88424379 88424449 View Gly GCC aaataaaata ccatgttgcg 0 0 76.27 58.50 17.77 Both chrUn 898 19701708 19701638 View Gly GCC cggtcggagc gttctttttg 0 0 76.27 58.50 17.77 Both chrUn 106 30537916 30537986 View Gly GCC atgatgacaa attctttttt 0 0 78.62 62.98 15.64 Both chrUn 122 33644237 33644307 View Gly GCC ttactcccaa attccttttt 0 0 78.62 62.98 15.64 Both chrUn 142 38713608 38713678 View Gly GCC taaattcggc attctttttg 0 0 78.62 62.98 15.64 Both chrUn 271 77360353 77360423 View Gly GCC ttctttcacc attctttttt 0 0 78.62 62.98 15.64 Both chrUn 356 99363800 99363870 View Gly GCC ttctctcacc attctttttt 0 0 78.62 62.98 15.64 Both chrUn 384 106377401 106377471 View Gly GCC ttctctcacc attctttttt 0 0 78.62 62.98 15.64 Both chrUn 484 158987221 158987291 View Gly GCC agataaatag ccatgtggcg 0 0 78.62 62.98 15.64 Both chrUn 52 13300464 13300534 View Gly GCC gtatttcatc attcttttgc 0 0 78.62 62.98 15.64 Both chrUn 613 105092557 105092487 View Gly GCC atgttcataa attctttttt 0 0 78.62 62.98 15.64 Both chrUn 62 15522270 15522340 View Gly GCC cattttcgaa actctttttg 0 0 78.62 62.98 15.64 Both chrUn 678 84692774 84692704 View Gly GCC tcttcacatg ccattttgtg 0 0 78.62 62.98 15.64 Both chrUn 716 73111194 73111124 View Gly GCC ggatagtggt ccataaactg 0 0 78.62 62.98 15.64 Both chrUn 73 19680784 19680854 View Gly GCC aagttgatgc attgtttttc 0 0 78.62 62.98 15.64 Both chrUn 74 19703087 19703157 View Gly GCC attaatcggc attatttaaa 0 0 78.62 62.98 15.64 Both chrUn 838 35480215 35480145 View Gly GCC agataaatag ccatgtggcg 0 0 78.62 62.98 15.64 Both chrUn 96 27259933 27260003 View Gly GCC gattgtcggc attgttttgg 0 0 78.62 62.98 15.64 Both chrUn 361 100516348 100516417 View Gly TCC tgatagtgag tccaactttt 0 0 29.44 19.39 10.05 Eufind chrUn 374 105114621 105114693 View Gly TCC tcttaaaatt atttttttga 0 0 34.88 11.23 23.65 Eufind chrUn 817 43384040 43383969 View Gly TCC atgaaatatc gagatttctt 0 0 43.42 17.10 26.32 Both chrUn 4 341534 341607 View Gly TCC ttgtctttgt aaannnnnnn 0 0 50.01 43.83 6.18 Eufind chrUn 157 43384563 43384633 View Gly TCC atgaaatatc gatttctttt 0 0 57.36 40.04 17.32 Eufind chrUn 412 113779677 113779748 View Gly TCC ttcacccgtc tgttattttt 0 0 61.70 42.13 19.57 Both chrUn 153 43261757 43261827 View Gly TCC tattccctgc tacatttttc 0 0 62.11 38.65 23.46 Eufind chrUn 155 43374571 43374641 View Gly TCC atgaaatatc gatttctttt 0 0 62.11 38.65 23.46 Eufind chrUn 282 81208041 81208111 View Gly TCC gagaaacgtc ttactctttt 0 0 62.79 38.43 24.36 Both chrUn 285 81299716 81299787 View Gly TCC tacttttgcc tacttttttt 0 0 65.43 39.11 26.32 Both chrUn 156 43380201 43380272 View Gly TCC atgaaatatc gatttctttt 0 0 73.31 46.98 26.33 Both chrUn 158 43388071 43388142 View Gly TCC atgaaatatc gatttctttt 0 0 73.31 46.98 26.33 Both chrUn 188 57121919 57121990 View Gly TCC agttatcacc gattccattt 0 0 73.31 46.98 26.33 Both chrUn 193 58265507 58265578 View Gly TCC ttttcccgcc gatttatttt 0 0 73.31 46.98 26.33 Both chrUn 23 1679077 1679148 View Gly TCC acgttgtcta gtacaatttt 0 0 73.31 46.98 26.33 Both chrUn 240 69837329 69837400 View Gly TCC cttccccgtc gatttttctt 0 0 73.31 46.98 26.33 Both chrUn 253 73631978 73632049 View Gly TCC ctctctcagc gaaatgtttt 0 0 73.31 46.98 26.33 Both chrUn 278 79964695 79964766 View Gly TCC tccactatga gattcctttt 0 0 73.31 46.98 26.33 Both chrUn 283 81208913 81208984 View Gly TCC ctttctcacc ttacctattt 0 0 73.31 46.98 26.33 Both chrUn 284 81213475 81213546 View Gly TCC gatgattacc ttactctttt 0 0 73.31 46.98 26.33 Both chrUn 304 83691316 83691387 View Gly TCC agcggtgtgc gatgcttttt 0 0 73.31 46.98 26.33 Both chrUn 305 83694886 83694957 View Gly TCC acaagtgtgc gattgttttt 0 0 73.31 46.98 26.33 Both chrUn 334 93162124 93162195 View Gly TCC ctcttgttga gaatcttttt 0 0 73.31 46.98 26.33 Both chrUn 371 104441964 104442035 View Gly TCC ccttttcgcc gattcatttt 0 0 73.31 46.98 26.33 Both chrUn 375 105115102 105115173 View Gly TCC atataaacat gatttttttt 0 0 73.31 46.98 26.33 Both chrUn 377 105136331 105136402 View Gly TCC ttaacaatgt gattattttt 0 0 73.31 46.98 26.33 Both chrUn 450 131924098 131924169 View Gly TCC ctgcttcgcc tattcatttt 0 0 73.31 46.98 26.33 Both chrUn 456 133623552 133623623 View Gly TCC ttttctcgcc ttaccatttt 0 0 73.31 46.98 26.33 Both chrUn 610 105135780 105135709 View Gly TCC ttaacaacgt gatccaattt 0 0 73.31 46.98 26.33 Both chrUn 611 105114925 105114854 View Gly TCC tcgtaaatgt gattattttt 0 0 73.31 46.98 26.33 Both chrUn 612 105114004 105113933 View Gly TCC aaacaactgt gatttttttg 0 0 73.31 46.98 26.33 Both chrUn 616 104445029 104444958 View Gly TCC ttttcccggc gaatcatttt 0 0 73.31 46.98 26.33 Both chrUn 646 93164624 93164553 View Gly TCC ctctcgttga taatattttt 0 0 73.31 46.98 26.33 Both chrUn 647 93154373 93154302 View Gly TCC ctctcgttga taactttttt 0 0 73.31 46.98 26.33 Both chrUn 668 85234439 85234368 View Gly TCC ctctcaccgc gaatgttttt 0 0 73.31 46.98 26.33 Both chrUn 681 83694163 83694092 View Gly TCC acaagtgtgc gattactttt 0 0 73.31 46.98 26.33 Both chrUn 697 81212893 81212822 View Gly TCC ctcttccgct ttacaatttt 0 0 73.31 46.98 26.33 Both chrUn 700 79969288 79969217 View Gly TCC taagatatac taatatttta 0 0 73.31 46.98 26.33 Both chrUn 728 69837134 69837063 View Gly TCC cagattcgcc gattgacttt 0 0 73.31 46.98 26.33 Both chrUn 857 31526439 31526368 View Gly TCC aaaatgtgac gatgttttgt 0 0 73.31 46.98 26.33 Both chrUn 935 7711001 7710930 View Gly TCC atatttcacc gattattttt 0 0 73.31 46.98 26.33 Both chrUn 94 26173049 26173120 View Gly TCC ttatttcacc gatttatttt 0 0 73.31 46.98 26.33 Both chrUn 941 5689930 5689859 View Gly TCC gtcgatgtgc gaactttttt 0 0 73.31 46.98 26.33 Both chrUn 946 4887969 4887898 View Gly TCC tttccatgtc gaactttttt 0 0 73.31 46.98 26.33 Both   Sequence Name tRNA # tRNA Bounds Link to Genome Browser tRNA Isotype Anticodon Upstream Region Downstream Region Intron Bounds Scores First-Pass Scanner Begin End Begin End Total (Cove) HMM 2' Str chrUn 918 13117941 13117857 View His ATG cagactcacc taggtgtttt 0 0 51.71 17.44 34.27 Eufind chrUn 189 57169821 57169898 View His GTG agttctttcg actctttttt 0 0 28.39 16.06 12.33 Eufind chrUn 390 108075738 108075809 View His GTG cacgccaact actctttttt 0 0 54.30 43.24 11.06 Eufind chrUn 553 123988829 123988758 View His GTG cctgaccatt actctttttt 0 0 56.21 44.10 12.11 Eufind chrUn 884 24653508 24653437 View His GTG tcagcggttc actccttttt 0 0 59.50 45.43 14.07 Eufind chrUn 341 97241712 97241783 View His GTG gcctctctcg ctcctttttg 0 0 59.97 43.49 16.48 Eufind chrUn 486 160887674 160887745 View His GTG gcctctctcg ctcctttttg 0 0 59.97 43.49 16.48 Eufind chrUn 581 115798639 115798568 View His GTG tatactcttg actctttttt 0 0 67.36 46.22 21.14 Both chrUn 525 136680495 136680424 View His GTG ctgtagcctt acttttttct 0 0 67.77 48.15 19.62 Both chrUn 185 56542974 56543045 View His GTG ctcattttcg actctttttt 0 0 74.47 48.59 25.88 Both chrUn 363 101197901 101197972 View His GTG taaactttcg tttccttttt 0 0 74.47 48.59 25.88 Both chrUn 389 108054947 108055018 View His GTG ctctttctcg actctttttt 0 0 74.47 48.59 25.88 Both chrUn 421 118753536 118753607 View His GTG tgtactcttg acgttttttt 0 0 74.47 48.59 25.88 Both chrUn 461 137381072 137381143 View His GTG tgtactcttg actttttttt 0 0 74.47 48.59 25.88 Both chrUn 521 138750761 138750690 View His GTG atctctctcg actccttttg 0 0 74.47 48.59 25.88 Both chrUn 626 100164745 100164674 View His GTG atctctctcg actccttttg 0 0 74.47 48.59 25.88 Both chrUn 654 89692344 89692273 View His GTG gtctctctcg actctttttt 0 0 74.47 48.59 25.88 Both chrUn 662 86353453 86353382 View His GTG gtttctctcg actccttttt 0 0 74.47 48.59 25.88 Both chrUn 761 61066607 61066536 View His GTG tgttctctcg actcgttttg 0 0 74.47 48.59 25.88 Both chrUn 883 24656376 24656305 View His GTG agttctttcg actctttttt 0 0 74.47 48.59 25.88 Both chrUn 942 5552070 5551999 View His GTG ttctctctcg actccttttt 0 0 74.47 48.59 25.88 Both chrUn 99 28895654 28895725 View His GTG tacactttcg actccttttg 0 0 74.47 48.59 25.88 Both   chrUn 104 30478409 30478482 View Ile AAT ggaaagtgtg aatatctttt 0 0 85.74 64.62 21.12 Both chrUn 145 38964572 38964645 View Ile AAT ggaaaatgtg aatatttttg 0 0 85.74 64.62 21.12 Both chrUn 262 76392844 76392917 View Ile AAT atggttgtcg aatttttttt 0 0 85.74 64.62 21.12 Both chrUn 263 76395545 76395618 View Ile AAT atgactgtcg aattttttat 0 0 85.74 64.62 21.12 Both chrUn 307 85129165 85129238 View Ile AAT cttccccgca aacttttttt 0 0 85.74 64.62 21.12 Both chrUn 308 85155256 85155329 View Ile AAT tttcgccgca aattcttttt 0 0 85.74 64.62 21.12 Both chrUn 309 85173287 85173360 View Ile AAT ctatatcacc aacttttttt 0 0 85.74 64.62 21.12 Both chrUn 312 85352202 85352275 View Ile AAT accgatcgca aatctttttt 0 0 85.74 64.62 21.12 Both chrUn 33 3994818 3994891 View Ile AAT gagttgacgt aatattttta 0 0 85.74 64.62 21.12 Both chrUn 335 94363434 94363507 View Ile AAT tagtatcgta aattgtttta 0 0 85.74 64.62 21.12 Both chrUn 362 100804561 100804634 View Ile AAT tccttcaaca aattcttttt 0 0 85.74 64.62 21.12 Both chrUn 403 110949701 110949774 View Ile AAT tttcttcgtg aactcttttt 0 0 85.74 64.62 21.12 Both chrUn 490 159634319 159634246 View Ile AAT tagtatcgca aactttttct 0 0 85.74 64.62 21.12 Both chrUn 575 118543150 118543077 View Ile AAT gggaagtgtg aattcttttt 0 0 85.74 64.62 21.12 Both chrUn 672 85170198 85170125 View Ile AAT tcagaccgca aactcttttt 0 0 85.74 64.62 21.12 Both chrUn 673 85167652 85167579 View Ile AAT cccggccgca aacttttttc 0 0 85.74 64.62 21.12 Both chrUn 674 85126549 85126476 View Ile AAT accgctcaca aatttttttg 0 0 85.74 64.62 21.12 Both chrUn 675 85125597 85125524 View Ile AAT ttctttccgt aacttttttt 0 0 85.74 64.62 21.12 Both chrUn 822 40946145 40946072 View Ile AAT cgcgaaacgt aatattttag 0 0 85.74 64.62 21.12 Both chrUn 824 40663460 40663387 View Ile AAT gggaagtgtg aaaacttttt 0 0 85.74 64.62 21.12 Both chrUn 835 37455284 37455211 View Ile AAT ccatttcatg aatgttttag 0 0 85.74 64.62 21.12 Both chrUn 843 33725132 33725059 View Ile AAT cgtctcaaca aatgttttgg 0 0 85.74 64.62 21.12 Both chrUn 849 33358291 33358218 View Ile AAT cctctcaaca aatatttttt 0 0 85.74 64.62 21.12 Both chrUn 869 27249982 27249909 View Ile AAT gaaaatgtca aatcattttt 0 0 85.74 64.62 21.12 Both chrUn 890 22399700 22399627 View Ile AAT ccgaaaccgt aattcctttt 0 0 85.74 64.62 21.12 Both chrUn 947 4711207 4711134 View Ile AAT acctgtatgc aacctttttg 0 0 85.74 64.62 21.12 Both chrUn 473 149271401 149271474 View Ile GAT atgtatctga ccaagtctac 0 0 77.34 48.34 29.00 Both chrUn 92 25632889 25632973 View Ile TAT cagaatatct ataacttttt 0 0 65.26 37.44 27.82 Both chrUn 893 21959688 21959604 View Ile TAT agaatatctg ataacttttt 0 0 67.61 42.72 24.89 Both chrUn 873 25703703 25703619 View Ile TAT cagaatatct atatcttttt 0 0 68.05 43.20 24.85 Both chrUn 874 25694155 25694071 View Ile TAT cagaatatct ataacttttt 0 0 73.16 44.36 28.80 Both chrUn 875 25642385 25642301 View Ile TAT cagaatatct ataagctttt 0 0 73.16 44.36 28.80 Both chrUn 876 25636216 25636132 View Ile TAT cagaatatct ataacttttt 0 0 73.16 44.36 28.80 Both chrUn 877 25631915 25631831 View Ile TAT cagaatatct ataacgtttt 0 0 73.16 44.36 28.80 Both chrUn 878 25627015 25626931 View Ile TAT cagaatatct ataacttttt 0 0 73.16 44.36 28.80 Both chrUn 78 21965339 21965423 View Ile TAT cagaatatct ataacttttt 0 0 75.05 46.25 28.80 Both chrUn 15 1038692 1038776 View Ile TAT gtgtgtatgt gatcattttt 1038730 1038740 74.59 46.29 28.30 Both chrUn 16 1039213 1039297 View Ile TAT gtatagatgt gatctttttt 1039251 1039261 74.09 45.80 28.29 Both chrUn 41 6648390 6648474 View Ile TAT tgcagaccaa gattgttttt 6648428 6648438 74.09 45.80 28.29 Both chrUn 42 7201385 7201469 View Ile TAT ttccgggcgt gatttttttg 7201423 7201433 74.59 46.29 28.30 Both   chrUn 764 60423058 60422975 View Leu AAG gtggcggact tttttttttt 0 0 36.76 16.95 19.81 Eufind chrUn 46 9777232 9777313 View Leu AAG cgtcgatcgc gttccttttt 0 0 50.06 22.31 27.75 Both chrUn 725 70056238 70056157 View Leu AAG aagaaaatgt gttacttttt 0 0 61.58 37.10 24.48 Both chrUn 147 40542435 40542516 View Leu AAG agagaaatgt gtttcttttt 0 0 65.79 35.99 29.80 Both chrUn 26 2493042 2493123 View Leu AAG acactcatgc gttctttttt 0 0 65.79 35.99 29.80 Both chrUn 64 15775260 15775341 View Leu AAG tttcgccggc gtttcttttt 0 0 65.79 35.99 29.80 Both chrUn 643 95342539 95342458 View Leu AAG tgtcgtcggc gttctttttt 0 0 65.79 35.99 29.80 Both chrUn 719 71752030 71751949 View Leu AAG attacccggc gtttcctttt 0 0 65.79 35.99 29.80 Both chrUn 786 51789343 51789262 View Leu AAG tgtgaaacgt gtttcttttt 0 0 65.79 35.99 29.80 Both chrUn 80 22357487 22357568 View Leu AAG ttttctcgtc gttctttttc 0 0 65.79 35.99 29.80 Both chrUn 81 22533442 22533523 View Leu AAG cacctgtgac gtttcttttt 0 0 65.79 35.99 29.80 Both chrUn 815 43577667 43577586 View Leu AAG agaaaaatgt gtttcttttt 0 0 65.79 35.99 29.80 Both chrUn 889 22535535 22535454 View Leu AAG tatagatcac gtttcttttt 0 0 65.79 35.99 29.80 Both chrUn 915 15740195 15740114 View Leu AAG attcgccggc gtttcctttt 0 0 65.79 35.99 29.80 Both chrUn 925 9775261 9775180 View Leu AAG tgtcgatcgc gtttcttttt 0 0 65.79 35.99 29.80 Both chrUn 249 71746987 71747068 View Leu AAG gtttcccggc gttctttttt 0 0 66.73 37.34 29.39 Both chrUn 397 109588951 109589032 View Leu AAG ttttcttgtc gcttactttt 0 0 66.73 37.34 29.39 Both chrUn 108 31320155 31320236 View Leu AAG aagttggcat gtttcttttt 0 0 67.88 38.08 29.80 Both chrUn 109 31320546 31320627 View Leu AAG tatctcatgt gtttcttttt 0 0 67.88 38.08 29.80 Both chrUn 20 1270992 1271073 View Leu AAG ttacccacgt gttctttttt 0 0 67.88 38.08 29.80 Both chrUn 726 70054294 70054213 View Leu AAG acgagaatgt gtttcttttt 0 0 67.88 38.08 29.80 Both chrUn 727 70050916 70050835 View Leu AAG aagaaaatgt gttccttttt 0 0 67.88 38.08 29.80 Both chrUn 386 107578972 107579096 View Leu CAA tctcaaacat gattgttttg 107579010 107579050 58.60 41.20 17.40 Both chrUn 590 109398024 109397902 View Leu CAA ctctctcacc gatctttttg 109397986 109397948 60.03 42.63 17.40 Both chrUn 912 16442131 16442012 View Leu CAA tattttcaac gatacttttt 16442093 16442058 60.37 42.97 17.40 Both chrUn 853 33100731 33100612 View Leu CAA ctctttcgca gatatttttt 33100693 33100658 61.43 44.03 17.40 Both chrUn 117 33384594 33384713 View Leu CAA ttgtttcgca gatatttttt 33384632 33384667 61.43 44.03 17.40 Both chrUn 135 37210345 37210469 View Leu CAA ttccaaacgt gatattttta 37210383 37210423 60.01 42.61 17.40 Both chrUn 836 37247507 37247383 View Leu CAA tcccaaacat gatatctttt 37247469 37247429 60.65 43.25 17.40 Both chrUn 805 48853644 48853525 View Leu CAA atagaccacc gatccttttg 48853606 48853571 58.98 44.28 14.70 Both chrUn 209 63430371 63430492 View Leu CAA cactttcgca gatatttttg 63430409 63430446 61.05 43.65 17.40 Both chrUn 255 74723293 74723412 View Leu CAA acgaggtcat aacactttta 74723331 74723366 61.64 44.25 17.39 Both chrUn 708 77262353 77262232 View Leu CAA tttttccaac aaaaattttc 77262315 77262278 59.66 42.26 17.40 Both chrUn 270 77266406 77266527 View Leu CAA tttttccaac aaagtttttt 77266444 77266481 61.40 44.00 17.40 Both chrUn 555 123574793 123574710 View Leu CAG cagcagactc cgagggttgt 0 0 52.29 27.87 24.42 Both chrUn 90 25217075 25217158 View Leu CAG cttatttcgt aaccttcttt 0 0 58.28 29.19 29.09 Both chrUn 453 133175659 133175742 View Leu CAG caatttcacc aatccttttt 0 0 71.68 39.97 31.71 Both chrUn 720 71520752 71520669 View Leu CAG ttgtcttacc aatctttttt 0 0 71.68 39.97 31.71 Both chrUn 961 1346212 1346129 View Leu CAG gtctctcacc aatctttttt 0 0 71.68 39.97 31.71 Both chrUn 468 146414767 146414851 View Leu GAG ggcagtgttc cgcnnnnnnn 0 0 50.97 28.42 22.55 Both chrUn 513 144238323 144238250 View Leu TAA tggaggtccg ctcgctcact 0 0 53.34 28.00 25.34 Both chrUn 880 25212132 25212049 View Leu TAA atattttgtc tatccttttt 0 0 57.40 29.34 28.06 Both chrUn 77 21953145 21953229 View Leu TAA cagaatatct tttttttttc 0 0 75.13 46.33 28.80 Both chrUn 920 13054833 13054750 View Leu TAA ctttcgatgt gcgatctttt 0 0 75.74 44.84 30.90 Both chrUn 5 399428 399511 View Leu TAA aatctgagac atattttttt 0 0 78.72 44.78 33.94 Both chrUn 97 27266780 27266863 View Leu TAA tcgcttggac aacttttttg 0 0 78.72 44.78 33.94 Both chrUn 879 25215531 25215449 View Leu TAG atattttgtt tatttttgtt 0 0 52.88 24.77 28.11 Both chrUn 608 105206145 105206073 View Leu TAG agccaatcgt attccttttt 0 0 58.45 48.14 10.31 Eufind chrUn 199 60479896 60479977 View Leu TAG agttggatgc actcaatttt 0 0 61.97 32.66 29.31 Both chrUn 614 104864182 104864101 View Leu TAG agttggatgc actctgtttt 0 0 69.26 39.98 29.28 Both chrUn 858 31415747 31415666 View Leu TAG gtgtatgtac actccttttt 0 0 69.61 40.34 29.27 Both chrUn 859 31415117 31415036 View Leu TAG tgtcaaatgc actccttttt 0 0 69.61 40.34 29.27 Both chrUn 55 14016448 14016529 View Leu TAG cggtctcatc attcgttttg 0 0 71.00 41.72 29.28 Both chrUn 929 9317932 9317851 View Leu TAG acttttctgc agtctttttg 0 0 71.00 41.72 29.28 Both   Sequence Name tRNA # tRNA Bounds Link to Genome Browser tRNA Isotype Anticodon Upstream Region Downstream Region Intron Bounds Scores First-Pass Scanner Begin End Begin End Total (Cove) HMM 2' Str chrUn 759 61907167 61907095 View Lys CTT aatttcgggc accgattttt 0 0 20.08 14.41 5.67 Eufind chrUn 560 121930278 121930208 View Lys CTT cataaggagt accgattttc 0 0 27.44 18.29 9.15 Eufind chrUn 539 127246512 127246442 View Lys CTT cataaggagt accatacttg 0 0 31.14 17.83 13.31 Eufind chrUn 617 104176538 104176468 View Lys CTT aatttcgggc accgattttt 0 0 44.83 32.24 12.59 Eufind chrUn 429 121048102 121048172 View Lys CTT aatttcgggc accgattttt 0 0 45.34 27.25 18.09 Both chrUn 250 72731117 72731187 View Lys CTT aatttcgggc accgattttt 0 0 45.92 27.83 18.09 Both chrUn 12 872110 872180 View Lys CTT aatttcgggc accgattttt 0 0 47.17 32.42 14.75 Both chrUn 256 74938396 74938466 View Lys CTT aatttcgggc accgattttt 0 0 52.25 34.16 18.09 Both chrUn 440 124753739 124753809 View Lys CTT aatttcgggc accgattttt 0 0 52.25 34.16 18.09 Both chrUn 686 82695464 82695394 View Lys CTT aatttcgggc accgattttt 0 0 52.25 34.16 18.09 Both chrUn 713 74937710 74937640 View Lys CTT aatttcgggc accgattttt 0 0 52.25 34.16 18.09 Both chrUn 218 65551159 65551231 View Lys CTT ttagcggttt tacgtttttt 0 0 64.24 59.67 4.57 Eufind chrUn 819 42504346 42504274 View Lys CTT cacgccaact tacgtttttg 0 0 64.24 59.67 4.57 Eufind chrUn 502 148708118 148708046 View Lys CTT gaagcgacat cggattggct 0 0 77.72 52.44 25.28 Both chrUn 150 42453072 42453144 View Lys CTT tgccatcgcc tacgtttttg 0 0 80.31 62.84 17.47 Both chrUn 151 42471803 42471875 View Lys CTT tcaaatcgtt tacgtttttg 0 0 80.31 62.84 17.47 Both chrUn 215 63811017 63811089 View Lys CTT gtctctcgcc tacgtttttg 0 0 80.31 62.84 17.47 Both chrUn 230 68271571 68271643 View Lys CTT aactattgcc tacgtttttg 0 0 80.31 62.84 17.47 Both chrUn 231 68273062 68273134 View Lys CTT gactatcgcc tacgttttgc 0 0 80.31 62.84 17.47 Both chrUn 232 68284151 68284223 View Lys CTT aactatcgcc tagatttttt 0 0 80.31 62.84 17.47 Both chrUn 233 68318480 68318552 View Lys CTT ttctatcgcc tacgtttttt 0 0 80.31 62.84 17.47 Both chrUn 235 68732475 68732547 View Lys CTT tactatcgcc tacattttcg 0 0 80.31 62.84 17.47 Both chrUn 251 73158105 73158177 View Lys CTT tgtcatcgcc gaagcatttt 0 0 80.31 62.84 17.47 Both chrUn 286 81338061 81338133 View Lys CTT gcctatcgcc tatctttttt 0 0 80.31 62.84 17.47 Both chrUn 291 82223919 82223991 View Lys CTT tgcgatcgcc tacgtttttg 0 0 80.31 62.84 17.47 Both chrUn 293 82269509 82269581 View Lys CTT ctcaatcgcc tacgtttttg 0 0 80.31 62.84 17.47 Both chrUn 299 83039908 83039980 View Lys CTT ttctctcgcc tatgcttttt 0 0 80.31 62.84 17.47 Both chrUn 322 88034220 88034292 View Lys CTT gattctcgcc tacgtttttg 0 0 80.31 62.84 17.47 Both chrUn 323 88037232 88037304 View Lys CTT gattcccgcc tacgtttttg 0 0 80.31 62.84 17.47 Both chrUn 324 88041830 88041902 View Lys CTT gattctcgcc tacgtttttg 0 0 80.31 62.84 17.47 Both chrUn 436 121597093 121597165 View Lys CTT tcgtctcgcc gatgtttttt 0 0 80.31 62.84 17.47 Both chrUn 446 128591203 128591275 View Lys CTT gattttcgca tacgtttttt 0 0 80.31 62.84 17.47 Both chrUn 465 139635595 139635667 View Lys CTT gattctcgcc tacgtttttg 0 0 80.31 62.84 17.47 Both chrUn 487 160322313 160322241 View Lys CTT gattcccgcc tacgtttttg 0 0 80.31 62.84 17.47 Both chrUn 53 13596844 13596916 View Lys CTT ttcgattgcc tatgtttttg 0 0 80.31 62.84 17.47 Both chrUn 545 125770543 125770471 View Lys CTT tgtcatcgcc gaagcatttt 0 0 80.31 62.84 17.47 Both chrUn 572 118564115 118564043 View Lys CTT tctctcggtc gaagtttttt 0 0 80.31 62.84 17.47 Both chrUn 588 111095551 111095479 View Lys CTT cttactcgcc tatcttttat 0 0 80.31 62.84 17.47 Both chrUn 60 15065008 15065080 View Lys CTT ttgcatcgcc tatgtttttt 0 0 80.31 62.84 17.47 Both chrUn 658 88040532 88040460 View Lys CTT tattatcgcc tacgttttta 0 0 80.31 62.84 17.47 Both chrUn 683 83040683 83040611 View Lys CTT ttctctcgcg aaatcttttt 0 0 80.31 62.84 17.47 Both chrUn 687 82228545 82228473 View Lys CTT ttcaatcggc tacgtttttg 0 0 80.31 62.84 17.47 Both chrUn 689 82209702 82209630 View Lys CTT ttctatcgcc tacgtttttg 0 0 80.31 62.84 17.47 Both chrUn 690 82207074 82207002 View Lys CTT ttcgatcgcc tacgtttttg 0 0 80.31 62.84 17.47 Both chrUn 820 42467818 42467746 View Lys CTT tcagatcgcc tacgtttttg 0 0 80.31 62.84 17.47 Both chrUn 855 32202789 32202717 View Lys CTT ttcgatcgcc tatctttttt 0 0 80.31 62.84 17.47 Both chrUn 856 32201340 32201268 View Lys CTT ttcaatcgcc tatctttttt 0 0 80.31 62.84 17.47 Both chrUn 924 11143292 11143220 View Lys CTT tcgaaacgcc tatgtttttg 0 0 80.31 62.84 17.47 Both chrUn 129 35347143 35347215 View Lys TTT tatgcgtcgg gatttttttg 0 0 41.41 30.38 11.03 Eufind chrUn 665 85475488 85475413 View Lys TTT ttcgtcgctg tgacttttgt 0 0 47.80 36.48 11.32 Eufind chrUn 128 35346914 35346987 View Lys TTT ctgcgtcggg tgattttttg 0 0 66.64 53.58 13.06 Eufind chrUn 125 34740440 34740512 View Lys TTT ctgttccggg tgatttttta 0 0 77.10 61.67 15.43 Both chrUn 131 35714046 35714118 View Lys TTT tagcggcggg tgattttttg 0 0 77.10 61.67 15.43 Both chrUn 137 37548411 37548483 View Lys TTT tcatcgcagg tgatgttttg 0 0 77.10 61.67 15.43 Both chrUn 234 68509177 68509249 View Lys TTT ctgcggcagg tgattttttt 0 0 77.10 61.67 15.43 Both chrUn 277 79921594 79921666 View Lys TTT cgcatcatgg tgactttttt 0 0 77.10 61.67 15.43 Both chrUn 303 83388366 83388438 View Lys TTT cttctccggg tgactttttt 0 0 77.10 61.67 15.43 Both chrUn 447 129691108 129691180 View Lys TTT gaatcgcagg tgattttttt 0 0 77.10 61.67 15.43 Both chrUn 536 128972528 128972456 View Lys TTT tagcgtcggg tgattttttg 0 0 77.10 61.67 15.43 Both chrUn 54 13736677 13736749 View Lys TTT tcgctcgctg tgattttttg 0 0 77.10 61.67 15.43 Both chrUn 682 83576977 83576905 View Lys TTT cttctcgtgg tgatcttttt 0 0 77.10 61.67 15.43 Both chrUn 711 76064724 76064652 View Lys TTT attgagcgta tgatttttat 0 0 77.10 61.67 15.43 Both chrUn 762 61024076 61024004 View Lys TTT gttgatcgga tgatcttttt 0 0 77.10 61.67 15.43 Both chrUn 788 50876241 50876169 View Lys TTT attcaccaga tgcctttttc 0 0 77.10 61.67 15.43 Both chrUn 827 38964442 38964370 View Lys TTT cttgtcgtgg tgattttttg 0 0 77.10 61.67 15.43 Both chrUn 840 35346131 35346059 View Lys TTT gaatcgcagg agattttttt 0 0 77.10 61.67 15.43 Both chrUn 841 35338510 35338438 View Lys TTT ccgctgcagg agatgttttg 0 0 77.10 61.67 15.43 Both chrUn 908 18620920 18620848 View Lys TTT acatttcggg tgactttttt 0 0 77.10 61.67 15.43 Both chrUn 950 4227150 4227078 View Lys TTT cgacatgtgg tgactttttt 0 0 77.10 61.67 15.43 Both   chrUn 499 149213715 149213642 View Met CAT gcttcgttga ccaacgaaaa 0 0 65.65 40.19 25.46 tRNAscan chrUn 488 160217613 160217540 View Met CAT ggaggggcgc ccatgcagaa 0 0 67.03 41.88 25.15 tRNAscan chrUn 124 33724651 33724722 View Met CAT acacaacgtc gaaccttttt 0 0 70.46 44.77 25.69 Both chrUn 132 36778242 36778313 View Met CAT tttctctcgc aaatcctttt 0 0 70.46 44.77 25.69 Both chrUn 269 77239789 77239860 View Met CAT catctccaac gatacatttt 0 0 70.46 44.77 25.69 Both chrUn 310 85193965 85194036 View Met CAT ctttttcgtc gaaccttttt 0 0 70.46 44.77 25.69 Both chrUn 336 94654600 94654671 View Met CAT tgttctcgac gatctttttt 0 0 70.46 44.77 25.69 Both chrUn 349 97890919 97890990 View Met CAT ggcgagcgtg gaaagttttt 0 0 70.46 44.77 25.69 Both chrUn 350 97894520 97894591 View Met CAT ggcgagcgcg gaaagttttt 0 0 70.46 44.77 25.69 Both chrUn 510 145920294 145920223 View Met CAT ggcgagcgtg gaaagttttt 0 0 70.46 44.77 25.69 Both chrUn 528 134513229 134513158 View Met CAT tttctctcgc gaatcctttt 0 0 70.46 44.77 25.69 Both chrUn 669 85200398 85200327 View Met CAT cttttccgtc gaactttttt 0 0 70.46 44.77 25.69 Both chrUn 670 85197523 85197452 View Met CAT cttttctgtc gaaccatttt 0 0 70.46 44.77 25.69 Both chrUn 732 68953468 68953397 View Met CAT aggaaataga aaattttttc 0 0 70.46 44.77 25.69 Both chrUn 420 118654632 118654704 View Met CAT cggttggcat atcctttttg 0 0 74.19 53.61 20.58 Both chrUn 48 11860385 11860457 View Met CAT ttcactcgtc agcttttttg 0 0 74.19 53.61 20.58 Both chrUn 50 12163347 12163419 View Met CAT gggcgtcgtg atctttttcg 0 0 74.19 53.61 20.58 Both chrUn 61 15343346 15343418 View Met CAT ctcactcgcc aggtttttgt 0 0 74.19 53.61 20.58 Both chrUn 696 81270908 81270836 View Met CAT ttctctcgcc aggtttttgc 0 0 74.19 53.61 20.58 Both chrUn 734 67973251 67973179 View Met CAT cccttccagt atcttttttt 0 0 74.19 53.61 20.58 Both chrUn 864 29993219 29993147 View Met CAT cggtatcgcc attcttttga 0 0 74.19 53.61 20.58 Both chrUn 911 16444306 16444234 View Met CAT tcgcatcacc aggcttttgc 0 0 74.19 53.61 20.58 Both chrUn 930 9312671 9312599 View Met CAT tcttttccgt atcttttttg 0 0 74.19 53.61 20.58 Both chrUn 943 5107393 5107321 View Met CAT ctccatcgcc agctttttta 0 0 74.19 53.61 20.58 Both chrUn 951 3676829 3676757 View Met CAT ggtttggtat atcttttttg 0 0 74.19 53.61 20.58 Both chrUn 466 146040505 146040578 View Met CAT gagttgccca ccaatcgaac 0 0 77.28 54.71 22.57 Both chrUn 508 146194121 146194048 View Met CAT gggccagttt cagagagtca 0 0 82.94 62.63 20.31 Both   chrUn 113 33254189 33254261 View Phe GAA ccctctatct attctttttt 0 0 80.05 55.38 24.67 Both chrUn 116 33259725 33259797 View Phe GAA agtcccatgt atcacttatt 0 0 80.05 55.38 24.67 Both chrUn 190 57766167 57766239 View Phe GAA ctcgttgtgt attgtttttt 0 0 80.05 55.38 24.67 Both chrUn 214 63510709 63510781 View Phe GAA tccccagtgt attctttttt 0 0 80.05 55.38 24.67 Both chrUn 751 63443925 63443853 View Phe GAA tcgttggtgt atctcttttt 0 0 80.05 55.38 24.67 Both chrUn 752 63441021 63440949 View Phe GAA tcgtatgtgt atctcttttt 0 0 80.05 55.38 24.67 Both chrUn 753 63439476 63439404 View Phe GAA cctgcggtgt attcgttttt 0 0 80.05 55.38 24.67 Both chrUn 776 57192727 57192655 View Phe GAA ccttccatgt gttctttttg 0 0 80.05 55.38 24.67 Both chrUn 903 18940463 18940391 View Phe GAA cctcccgtct tttctttttt 0 0 80.05 55.38 24.67 Both chrUn 955 2784185 2784113 View Phe GAA gagagtatct ttcttttttg 0 0 80.05 55.38 24.67 Both chrUn 204 62868421 62868493 View Phe GAA ttaactgtcc attctttttt 0 0 80.50 56.53 23.97 Both chrUn 212 63448309 63448381 View Phe GAA tctctcgtct attctttttt 0 0 80.50 56.53 23.97 Both chrUn 287 81503187 81503259 View Phe GAA ctttttcatc atcttttttt 0 0 80.50 56.53 23.97 Both chrUn 32 3810627 3810699 View Phe GAA cggtgtgtct attctttttt 0 0 80.50 56.53 23.97 Both chrUn 44 9401128 9401200 View Phe GAA ccttcctgcc attcttttac 0 0 80.50 56.53 23.97 Both chrUn 632 99297104 99297032 View Phe GAA ttttcctacc attctttttt 0 0 80.50 56.53 23.97 Both chrUn 211 63447615 63447687 View Phe GAA ggagaagtgt atttgctttt 0 0 80.79 54.41 26.38 Both chrUn 288 81537329 81537401 View Phe GAA tccatccgtc atttcttttt 0 0 81.50 57.90 23.60 Both   Sequence Name tRNA # tRNA Bounds Link to Genome Browser tRNA Isotype Anticodon Upstream Region Downstream Region Intron Bounds Scores First-Pass Scanner Begin End Begin End Total (Cove) HMM 2' Str chrUn 379 105209956 105210027 View Pro AGG acacattcgt attctttttt 0 0 64.74 55.92 8.82 Eufind chrUn 757 62491947 62491876 View Pro AGG ttcgaagcgt acaatctttt 0 0 73.56 53.69 19.87 Both chrUn 154 43312811 43312882 View Pro AGG gtgcaaacgt acttactttt 0 0 75.14 53.21 21.93 Both chrUn 258 76344906 76344977 View Pro AGG cggcgagcgt acttactttt 0 0 75.14 53.21 21.93 Both chrUn 118 33456305 33456376 View Pro AGG agatgagcgt acttactttt 0 0 76.22 54.66 21.56 Both chrUn 123 33712645 33712716 View Pro AGG ttgtttttgt actttctttt 0 0 76.22 54.66 21.56 Both chrUn 844 33723196 33723125 View Pro AGG agttgcgcgt acttcctttt 0 0 76.22 54.66 21.56 Both chrUn 945 4922601 4922530 View Pro AGG gcaccgacgt acttactttt 0 0 76.22 54.66 21.56 Both chrUn 514 141474426 141474353 View Pro CGG tcggcgcaat ctgagaagcc 0 0 62.10 30.53 31.57 Both chrUn 750 63444707 63444636 View Pro CGG cgcaaacagc aaattccttt 0 0 74.15 53.91 20.24 Both chrUn 373 104749408 104749479 View Pro CGG gtctgccagt aaatcctttt 0 0 75.76 55.52 20.24 Both chrUn 43 8768788 8768859 View Pro CGG gtaaatcagt aaactttttt 0 0 75.76 55.52 20.24 Both chrUn 475 149540495 149540566 View Pro CGG gtctgccagt aaatcctttt 0 0 75.76 55.52 20.24 Both chrUn 620 103134835 103134764 View Pro CGG ttttctcagc aaactttttt 0 0 75.76 55.52 20.24 Both chrUn 395 109191950 109192033 View Pro GGG ttctttaatt aatctccttt 0 0 49.52 23.15 26.37 Both chrUn 587 111749904 111749821 View Pro GGG ttctctaatt aatcacccgt 0 0 49.52 23.15 26.37 Both chrUn 953 3422362 3422291 View Pro GGG agaacactgt attctttttt 0 0 62.52 53.19 9.33 Eufind chrUn 483 155098948 155099021 View Pro GGG cgagtaacaa ccgaaagccc 0 0 62.54 36.73 25.81 Both chrUn 729 69473666 69473596 View Pro TGG agtttccgtc atttcttttt 0 0 68.69 46.18 22.51 Eufind chrUn 767 59291924 59291853 View Pro TGG aagattttaa attctttttt 0 0 71.23 55.63 15.60 Both chrUn 606 105210480 105210409 View Pro TGG agctaatcgt attccttttt 0 0 72.52 54.09 18.43 Both chrUn 114 33255695 33255766 View Pro TGG gcaaaatcgc attctttttt 0 0 77.13 55.19 21.94 Both chrUn 115 33259435 33259506 View Pro TGG gcttagtcgt attctttttt 0 0 77.13 55.19 21.94 Both chrUn 139 37718239 37718310 View Pro TGG agtgaaatgt attccttttt 0 0 77.13 55.19 21.94 Both chrUn 14 1007578 1007649 View Pro TGG tgagaagtgt attatttttt 0 0 77.13 55.19 21.94 Both chrUn 168 49046331 49046402 View Pro TGG gtttcccgtc atttcttttt 0 0 77.13 55.19 21.94 Both chrUn 170 49872105 49872176 View Pro TGG tttctcgccc aatattttta 0 0 77.13 55.19 21.94 Both chrUn 171 49893906 49893977 View Pro TGG cttttctgtc attctttttt 0 0 77.13 55.19 21.94 Both chrUn 329 90194502 90194573 View Pro TGG gatattctgt attccttttt 0 0 77.13 55.19 21.94 Both chrUn 378 105207219 105207290 View Pro TGG acaaaatagt attccttttt 0 0 77.13 55.19 21.94 Both chrUn 380 105353011 105353082 View Pro TGG ttttcctgta attctttttt 0 0 77.13 55.19 21.94 Both chrUn 462 137581764 137581835 View Pro TGG tagaatctgc atttcttttt 0 0 77.13 55.19 21.94 Both chrUn 489 159676715 159676644 View Pro TGG aatattctgt attcattttt 0 0 77.13 55.19 21.94 Both chrUn 49 11894225 11894296 View Pro TGG agaatctcgt attccttttt 0 0 77.13 55.19 21.94 Both chrUn 506 147367969 147367898 View Pro TGG ttgattttgc attccttttt 0 0 77.13 55.19 21.94 Both chrUn 523 137582474 137582403 View Pro TGG attaccgtga attccttttt 0 0 77.13 55.19 21.94 Both chrUn 585 113448381 113448310 View Pro TGG tttaaacggc attccctttt 0 0 77.13 55.19 21.94 Both chrUn 607 105208244 105208173 View Pro TGG tagattctgt attctttttt 0 0 77.13 55.19 21.94 Both chrUn 699 80189326 80189255 View Pro TGG ttccgagtgc attccttttt 0 0 77.13 55.19 21.94 Both chrUn 733 68095093 68095022 View Pro TGG agaaagatgt attccttttt 0 0 77.13 55.19 21.94 Both chrUn 813 43703955 43703884 View Pro TGG cttttcttgt atttcttttt 0 0 77.13 55.19 21.94 Both chrUn 82 23865740 23865811 View Pro TGG ttttaaatgt attccctttt 0 0 77.13 55.19 21.94 Both chrUn 83 23871055 23871126 View Pro TGG aatgtctcgt attccttttt 0 0 77.13 55.19 21.94 Both chrUn 832 37999305 37999234 View Pro TGG gagagaatgt attctttttt 0 0 77.13 55.19 21.94 Both chrUn 833 37626762 37626691 View Pro TGG agtaaaatgt attccttttt 0 0 77.13 55.19 21.94 Both chrUn 850 33258907 33258836 View Pro TGG tgtgagacac atttcttttt 0 0 77.13 55.19 21.94 Both chrUn 851 33255121 33255050 View Pro TGG tatcagacat atttagtttt 0 0 77.13 55.19 21.94 Both chrUn 887 24644683 24644612 View Pro TGG ttcaaatcgt aatatatttt 0 0 77.13 55.19 21.94 Both chrUn 933 7972088 7972017 View Pro TGG aggaaaatgg attcattttt 0 0 77.13 55.19 21.94 Both chrUn 944 4923123 4923052 View Pro TGG aaagaaatgt attgtttttt 0 0 77.13 55.19 21.94 Both chrUn 960 1369685 1369614 View Pro TGG aatgaagtgt attccttttt 0 0 77.13 55.19 21.94 Both chrUn 965 1194476 1194405 View Pro TGG ttgaaatcgt attctttttt 0 0 77.13 55.19 21.94 Both chrUn 966 1189335 1189264 View Pro TGG tgaaacttgt attctttttt 0 0 77.13 55.19 21.94 Both chrUn 969 516710 516639 View Pro TGG ttgtttttgt attcctattt 0 0 77.13 55.19 21.94 Both   chrUn 737 67023255 67023184 View Pseudo ??? tttctcaagt ttttgttttt 0 0 20.32 26.67 -6.35 Eufind chrUn 627 99930810 99930739 View Pseudo ??? tcaaaaatct tctttctttc 0 0 20.95 31.42 -10.47 Eufind chrUn 791 50697828 50697762 View Pseudo ??? tttgggttct aaactttttg 0 0 22.12 31.95 -9.83 Eufind chrUn 95 26903157 26903238 View Pseudo ??? ctcaacttgt aatgattttt 0 0 23.11 35.82 -12.71 Eufind chrUn 584 113450799 113450726 View Pseudo ??? atcttcacgc atccattttt 0 0 23.84 33.54 -9.70 Eufind chrUn 174 50667278 50667352 View Pseudo ??? caataaattt aactttttga 0 0 24.23 27.86 -3.63 Eufind chrUn 175 50667466 50667540 View Pseudo ??? caataaattt aactttttga 0 0 24.23 27.86 -3.63 Eufind chrUn 478 152336084 152336158 View Pseudo ??? caataaattt aactttttga 0 0 24.23 27.86 -3.63 Eufind chrUn 480 152336460 152336534 View Pseudo ??? caataaattt aactttttga 0 0 24.23 27.86 -3.63 Eufind chrUn 481 152336836 152336910 View Pseudo ??? caataaattt aactttttga 0 0 24.23 27.86 -3.63 Eufind chrUn 173 50667092 50667163 View Pseudo ??? aaaatttcgg aaactttttg 0 0 24.44 31.66 -7.22 Eufind chrUn 586 112787083 112787011 View Pseudo ??? atctgaatgt gcgatttttt 0 0 24.77 34.89 -10.12 Eufind chrUn 181 50787462 50787535 View Pseudo ??? cgataaattt aacgttttga 0 0 28.77 30.70 -1.93 Eufind chrUn 739 66339423 66339352 View Pseudo ??? atattcgatg attctttttt 0 0 31.71 28.52 3.19 Eufind chrUn 736 67797286 67797214 View Pseudo ??? cgccagcttc gagtgttttt 0 0 33.13 50.22 -17.09 Eufind chrUn 430 121079717 121079789 View Pseudo AAG aaaaactcgc ataggttttt 0 0 20.97 37.90 -16.93 Eufind chrUn 603 105346063 105345982 View Pseudo AAG ctcctttcaa aatctttatt 0 0 22.70 22.16 0.54 Eufind chrUn 664 85709391 85709318 View Pseudo ACC ctcagtttgc tttccctttt 0 0 20.25 28.16 -7.91 Eufind chrUn 219 65982706 65982777 View Pseudo ACC gtcatttaca tttttctttt 0 0 20.48 30.38 -9.90 Eufind chrUn 802 49287266 49287196 View Pseudo ACC tttcgaaaat attagctttt 0 0 22.36 27.69 -5.33 Eufind chrUn 803 49286952 49286882 View Pseudo ACC tttcgaaaat attagctttt 0 0 22.36 27.69 -5.33 Eufind chrUn 563 121664120 121664048 View Pseudo ACC tatgaatgtg aacaaagctt 0 0 22.58 36.22 -13.64 Eufind chrUn 354 98919990 98920066 View Pseudo ACC tcgaaagatt acttttgaaa 0 0 26.91 26.06 0.85 Eufind chrUn 562 121752428 121752349 View Pseudo ACC cgtcaatggg ccagatgcgg 121752391 121752385 23.29 38.96 -15.67 Eufind chrUn 561 121753771 121753692 View Pseudo ACC cgtcaatggg ccagatgcgg 121753734 121753728 23.29 38.96 -15.67 Eufind chrUn 639 97091716 97091637 View Pseudo ACC catcaatgtg caagatccgg 97091679 97091673 36.99 42.57 -5.58 Eufind chrUn 638 97095019 97094940 View Pseudo ACC catcaatgtg caagatgggg 97094982 97094976 30.00 42.67 -12.67 Eufind chrUn 579 116549134 116549064 View Pseudo ACG cgccatcttc attttagagt 0 0 28.14 37.02 -8.88 Eufind chrUn 580 116547651 116547579 View Pseudo ACG gggcgagctc aacttttttt 0 0 38.73 56.83 -18.10 Eufind chrUn 491 156485889 156485818 View Pseudo AGC atgaattcgc ccattttgtt 0 0 20.52 20.34 0.18 Eufind chrUn 360 99675985 99676057 View Pseudo AGC ccgacttcac aatttttttt 0 0 22.20 41.34 -19.14 Eufind chrUn 493 155248263 155248191 View Pseudo AGC gaaaatttgg attgcctttt 0 0 27.33 48.87 -21.54 Eufind chrUn 598 105896793 105896721 View Pseudo AGC gaaaatttgg attgcctttt 0 0 27.33 48.87 -21.54 Eufind chrUn 706 78267117 78267044 View Pseudo AGC gcatgaattc gaaacatttt 0 0 29.76 29.03 0.73 Eufind chrUn 712 75364163 75364092 View Pseudo AGG gatcgagttt tctatttttt 0 0 26.98 38.28 -11.30 Eufind chrUn 406 112460971 112461052 View Pseudo AGG tgtgtcatgc actgtttttt 112461007 112461018 35.52 43.71 -8.19 Eufind chrUn 407 112471382 112471463 View Pseudo AGG tgtgtcatgc aatgtttttt 112471418 112471428 44.95 51.52 -6.57 Eufind chrUn 422 119382548 119382629 View Pseudo AGG tgagtcatgc aatgcttttt 119382584 119382594 20.95 38.08 -17.13 Eufind chrUn 423 119383599 119383680 View Pseudo AGG tgtgtcatgc aatgtttttt 119383635 119383645 46.22 52.79 -6.57 Eufind chrUn 424 119387392 119387473 View Pseudo AGG cgtttcatgc aaagtttttt 119387428 119387438 41.24 47.81 -6.57 Eufind chrUn 426 120052576 120052657 View Pseudo AGG cgtggaatgc aacttttttt 120052612 120052617 37.31 39.66 -2.35 Eufind chrUn 441 124755519 124755600 View Pseudo AGG tgtgaaatgc aatgtttttt 124755555 124755565 45.09 46.15 -1.06 Eufind chrUn 547 124899263 124899182 View Pseudo AGG tgtgtcatgc aatgtttttt 124899227 124899217 44.95 51.52 -6.57 Eufind chrUn 445 127137643 127137724 View Pseudo AGG tgtgtcatgc aatgtttttt 127137679 127137689 44.95 51.52 -6.57 Eufind chrUn 332 91907206 91907288 View Pseudo AGG cgtttgatgc ataatttttt 91907242 91907253 40.32 44.55 -4.23 Eufind chrUn 3 243532 243605 View Pseudo AGT tcaacaatca ttgttttttc 0 0 22.23 34.66 -12.43 Eufind chrUn 169 49073414 49073487 View Pseudo AGT ttctaaatca ttgttttttg 0 0 23.37 31.46 -8.09 Eufind chrUn 804 49074205 49074132 View Pseudo AGT ttctgaatca ttgttttttg 0 0 23.37 31.46 -8.09 Eufind chrUn 266 76757201 76757270 View Pseudo AGT ccgtctcctc ttcaatcttt 0 0 28.38 36.76 -8.38 Eufind chrUn 267 76760423 76760492 View Pseudo AGT ccgtctcctc tccaatcttt 0 0 35.41 42.90 -7.49 Eufind chrUn 631 99327840 99327774 View Pseudo AGT cacgccaact cggaatcttt 0 0 41.29 38.13 3.16 Eufind chrUn 538 127452396 127452324 View Pseudo ATA ccgcgctctc aatgtttttt 0 0 21.00 44.64 -23.64 Eufind chrUn 790 50750993 50750918 View Pseudo ATC cgaaaatttt aactttatga 0 0 20.52 20.47 0.05 Eufind chrUn 177 50699242 50699316 View Pseudo ATC caaaagtttt cattttttga 0 0 21.07 24.82 -3.75 Eufind chrUn 433 121383850 121383926 View Pseudo ATC ttcgaaaatt ttttttgaat 0 0 21.50 25.69 -4.19 Eufind chrUn 485 160262860 160262936 View Pseudo ATC ttcgaaaatt ttttttgaat 0 0 21.50 25.69 -4.19 Eufind chrUn 178 50703728 50703801 View Pseudo ATC tcgaaaactt aaaacttttt 0 0 21.71 31.24 -9.53 Eufind chrUn 633 98878054 98877980 View Pseudo ATC cgaaagtttt aattttggga 0 0 21.78 24.15 -2.37 Eufind chrUn 520 140417344 140417268 View Pseudo ATC ttgaaatttt acttttcgaa 0 0 21.92 25.20 -3.28 Eufind chrUn 789 50761176 50761100 View Pseudo ATC tcgaaaatgt attgagtgaa 0 0 22.24 28.00 -5.76 Eufind chrUn 535 129062807 129062731 View Pseudo ATC ttgaaaaggt ctttttgaat 0 0 22.57 27.20 -4.63 Eufind chrUn 353 98915686 98915760 View Pseudo ATC cgcaaaattt aactctccga 0 0 22.91 27.62 -4.71 Eufind chrUn 176 50667654 50667728 View Pseudo ATC caataaattt aactttttga 0 0 23.02 27.75 -4.73 Eufind chrUn 479 152336272 152336346 View Pseudo ATC caataaattt aactttttga 0 0 23.02 27.75 -4.73 Eufind chrUn 792 50697012 50696938 View Pseudo ATC caaaagtttt cattttttga 0 0 23.74 27.48 -3.74 Eufind chrUn 355 98920177 98920253 View Pseudo ATC ttgaaaattt acttttggaa 0 0 23.92 29.03 -5.11 Eufind chrUn 352 98906499 98906572 View Pseudo ATC ttttcataaa aactttcgga 0 0 24.92 25.45 -0.53 Eufind chrUn 435 121385802 121385877 View Pseudo ATC tcgagaattt agttttcgaa 0 0 26.06 29.54 -3.48 Eufind chrUn 351 98892810 98892882 View Pseudo ATC gaaagttttc taactttagg 0 0 27.43 30.13 -2.70 Eufind chrUn 519 140417531 140417456 View Pseudo ATG tcgaaaattt gttttttaaa 0 0 20.86 21.00 -0.14 Eufind chrUn 417 116549197 116549269 View Pseudo ATG tccgggatgg tttagttttt 0 0 21.15 50.20 -29.05 Eufind chrUn 416 116547716 116547786 View Pseudo ATG ttggatgaag tttggctttt 0 0 23.84 29.40 -5.56 Eufind chrUn 183 52242210 52242282 View Pseudo ATG cgtggctgtg caagttttta 0 0 25.25 27.32 -2.07 Eufind chrUn 495 154683891 154683819 View Pseudo ATG cgcagcagga aataattttt 0 0 25.28 51.06 -25.78 Eufind chrUn 568 120616818 120616746 View Pseudo ATG cgcagcagga aataattttt 0 0 25.28 51.06 -25.78 Eufind chrUn 225 66500108 66500184 View Pseudo ATG accttcaccc gtttttgcag 0 0 27.18 28.91 -1.73 Eufind chrUn 180 50757188 50757262 View Pseudo ATT cgaaaaattt aaactttttg 0 0 21.37 19.67 1.70 Eufind chrUn 179 50756812 50756886 View Pseudo ATT cgaaagtttt aacctttaga 0 0 22.98 19.88 3.10 Eufind chrUn 338 95764942 95765014 View Pseudo CAA nnnnnnnnnn attccatttt 0 0 30.00 31.46 -1.46 Eufind chrUn 358 99652258 99652328 View Pseudo CAA annnnnnnnn aacctttttt 0 0 45.57 48.65 -3.08 Eufind chrUn 418 118558325 118558397 View Pseudo CAC ttcttttgtg accttttttg 0 0 23.50 32.26 -8.76 Eufind chrUn 404 111194578 111194649 View Pseudo CAC tttggtgtgc attttctttt 0 0 23.60 40.76 -17.16 Eufind chrUn 419 118562493 118562566 View Pseudo CAC ctctcctgtg aacttttttg 0 0 31.56 31.62 -0.06 Eufind chrUn 394 108969442 108969514 View Pseudo CAC ctcgctgtgc ttttcttttt 0 0 31.73 38.45 -6.72 Eufind chrUn 574 118560073 118560002 View Pseudo CAC ctcttttgta aacttttttt 0 0 32.58 37.36 -4.78 Eufind chrUn 201 61369240 61369308 View Pseudo CAC ctcagtgatc aaatgttttt 0 0 43.15 39.21 3.94 Eufind chrUn 594 107689451 107689378 View Pseudo CAT gaaatttttt aaactttttg 0 0 24.81 22.42 2.39 Eufind chrUn 573 118561583 118561512 View Pseudo CAT tccatttgtg aacttttttt 0 0 29.54 42.15 -12.61 Eufind chrUn 970 499446 499375 View Pseudo CCA agacaagtat tgtacttctg 0 0 47.04 44.40 2.64 Eufind chrUn 290 81710276 81710348 View Pseudo CCA atagccatga aannnnnnnn 0 0 47.25 43.15 4.10 Eufind chrUn 629 99648482 99648410 View Pseudo CCC cctgtgtgtg aaccattttt 0 0 32.87 48.58 -15.71 Eufind chrUn 624 101198538 101198472 View Pseudo CGA aattggggga tttcattatt 0 0 21.85 8.37 13.48 Eufind chrUn 743 65902698 65902633 View Pseudo CGA atgggatttc aattttttgg 0 0 21.90 9.23 12.67 Eufind chrUn 372 104651942 104652015 View Pseudo CGC ctttttctat aatctttttg 0 0 20.36 20.95 -0.59 Eufind chrUn 714 74358259 74358188 View Pseudo CGC acccataagt ttgtagcttt 0 0 21.01 27.54 -6.53 Eufind chrUn 399 110577345 110577418 View Pseudo CGC ttattcggtg ttctttttcg 0 0 21.51 40.48 -18.97 Eufind chrUn 405 111272921 111272993 View Pseudo CGC ctacttcgta aaaccttttt 0 0 38.01 35.70 2.31 Eufind chrUn 531 133522169 133522097 View Pseudo CGG tttctttagt aaactttttt 0 0 27.78 50.88 -23.10 Eufind chrUn 127 35281509 35281581 View Pseudo CTC ctatctgaga gatttttatg 0 0 20.43 22.80 -2.37 Eufind chrUn 515 140895343 140895271 View Pseudo CTC tgctctgaga gatttttatg 0 0 23.62 25.23 -1.61 Eufind chrUn 220 66335079 66335149 View Pseudo CTC ccatatagca gatttctttt 0 0 26.02 5.83 20.19 Eufind chrUn 694 81540549 81540478 View Pseudo CTC tttcctgtca gacgctctca 0 0 37.23 43.96 -6.73 Eufind chrUn 921 12757298 12757226 View Pseudo CTC acgtaaaaag tcctttttta 0 0 37.64 32.94 4.70 Eufind chrUn 164 48219762 48219833 View Pseudo CTC gaatcccccc aaatcttttt 0 0 47.37 48.77 -1.40 Eufind chrUn 717 72844973 72844902 View Pseudo CTT cgccggccgc atttttttct 0 0 21.11 25.55 -4.44 Eufind chrUn 388 107920267 107920338 View Pseudo CTT cgccggccgc attttttttt 0 0 23.98 21.54 2.44 Eufind chrUn 451 132559740 132559811 View Pseudo CTT cgccggccgc attttttttc 0 0 23.98 21.54 2.44 Eufind chrUn 546 125377732 125377661 View Pseudo CTT cgccggccgc attttttttt 0 0 23.98 21.54 2.44 Eufind chrUn 552 124137196 124137125 View Pseudo CTT cgccggccgc attttttttt 0 0 23.98 21.54 2.44 Eufind chrUn 655 89180265 89180194 View Pseudo CTT cgccggccgc attttttttt 0 0 23.98 21.54 2.44 Eufind chrUn 914 15941358 15941287 View Pseudo CTT agttcgaaaa caactttttg 0 0 24.88 39.25 -14.37 Eufind chrUn 364 101318331 101318401 View Pseudo CTT aacttcgggc atatattttt 0 0 27.08 27.12 -0.04 Eufind chrUn 239 69617787 69617858 View Pseudo CTT tgctgcggag ccgatttttg 0 0 27.09 23.21 3.88 Eufind chrUn 482 153550186 153550258 View Pseudo CTT ttccccagcg tatccttttt 0 0 41.13 41.27 -0.14 Eufind chrUn 470 146845877 146845949 View Pseudo CTT ttccccagcg tatccttttt 0 0 47.13 46.91 0.22 Eufind chrUn 756 62532281 62532203 View Pseudo GAC caccggggct cggtctttgc 0 0 20.16 19.61 0.55 Eufind chrUn 202 62012953 62013027 View Pseudo GAC ctcagcgatg ctttttttgc 0 0 25.32 33.96 -8.64 Eufind chrUn 311 85200497 85200568 View Pseudo GAG ccgcagctac aaaccttttt 0 0 21.42 37.43 -16.01 Eufind chrUn 297 82953153 82953226 View Pseudo GAT ttctgtttac caaccttttt 0 0 21.35 32.80 -11.45 Eufind chrUn 730 69423675 69423598 View Pseudo GAT ttccaaactt atcttttttg 0 0 25.88 30.15 -4.27 Eufind chrUn 731 69423355 69423278 View Pseudo GAT tttcaaattt atctttttta 0 0 32.72 36.02 -3.30 Eufind chrUn 559 121970602 121970529 View Pseudo GCC ttcgatgtgc aaaccttttt 0 0 22.98 38.71 -15.73 Eufind chrUn 402 110933085 110933157 View Pseudo GCC ctcttctggt tcaaattgtt 0 0 27.83 25.38 2.45 Eufind chrUn 79 22343296 22343370 View Pseudo GCC attttaattt attcgttttg 0 0 33.92 35.68 -1.76 Eufind chrUn 437 123209794 123209862 View Pseudo GCC agaacagtta ccatgttgag 0 0 37.00 35.80 1.20 Eufind chrUn 558 121986774 121986704 View Pseudo GCC tgcttccgat tcatgcgcac 0 0 38.21 35.95 2.26 Eufind chrUn 541 126585107 126585037 View Pseudo GCC ttggaactgg ccatgttccg 0 0 49.70 49.99 -0.29 Eufind chrUn 339 96023198 96023270 View Pseudo GCC aatttggtat ccatgttctg 0 0 53.69 50.08 3.61 Eufind chrUn 457 134852800 134852870 View Pseudo GCC gaatagcgaa ccatgtgctg 0 0 53.91 58.35 -4.44 Eufind chrUn 101 28962345 28962415 View Pseudo GCC cgcacgccaa attcttttga 0 0 54.94 57.53 -2.59 Eufind chrUn 431 121228996 121229066 View Pseudo GGC ttcttttgtg ttgttttctt 0 0 20.54 30.07 -9.53 Eufind chrUn 556 123159339 123159269 View Pseudo GGC ttcttttgtg ttgttttctt 0 0 20.54 30.07 -9.53 Eufind chrUn 618 103859729 103859661 View Pseudo GGC ctgagaagcg accaaactct 0 0 23.59 19.29 4.30 Eufind chrUn 648 92690487 92690415 View Pseudo GGC gcaactcttt agcagtgatt 0 0 26.07 42.68 -16.61 Eufind chrUn 760 61588583 61588511 View Pseudo GGC gtcgccttct aaaccttttt 0 0 29.73 37.71 -7.98 Eufind chrUn 224 66469316 66469387 View Pseudo GGT tcccagctcg aaatattttt 0 0 25.45 41.53 -16.08 Eufind chrUn 765 59658414 59658335 View Pseudo GTA gatagctcat gatttctttt 59658379 59658369 32.01 27.64 4.37 Eufind chrUn 359 99654022 99654096 View Pseudo GTC cacttttgta atcttttttt 0 0 21.55 21.68 -0.13 Eufind chrUn 749 63503402 63503330 View Pseudo GTC tcgtggccgt ccgatgtttt 0 0 21.60 43.72 -22.12 Eufind chrUn 213 63503961 63504040 View Pseudo GTC cgtggatgac gagcagtaca 0 0 24.20 29.79 -5.59 Eufind chrUn 272 78276118 78276190 View Pseudo GTC ccactcttcc aaaccttttt 0 0 28.77 47.58 -18.81 Eufind chrUn 748 63529790 63529718 View Pseudo GTC cgtggatggc tccggtttta 0 0 29.05 37.84 -8.79 Eufind chrUn 758 62020706 62020633 View Pseudo GTC ttccgctgat aagttttttt 0 0 33.44 43.95 -10.51 Eufind chrUn 391 108102314 108102385 View Pseudo GTG cgagttcatt actttttttt 0 0 39.81 43.32 -3.51 Eufind chrUn 707 77710855 77710783 View Pseudo TAG gatgtgagtt aatcgttttt 0 0 26.76 45.83 -19.07 Eufind chrUn 570 119680588 119680515 View Pseudo TAT tgaaaatttt aaactttttg 0 0 20.09 22.60 -2.51 Eufind chrUn 816 43387843 43387771 View Pseudo TCC atgaaatatc actttgaaat 0 0 22.86 30.26 -7.40 Eufind chrUn 238 69247702 69247774 View Pseudo TCC tctcttatct aaacttgttt 0 0 26.71 50.20 -23.49 Eufind chrUn 565 121387207 121387134 View Pseudo TCT cgaaaatttt aaactttttg 0 0 26.04 25.09 0.95 Eufind chrUn 567 121381039 121380966 View Pseudo TCT gagaattttt aaacttttgg 0 0 27.30 23.25 4.05 Eufind chrUn 498 152437578 152437491 View Pseudo TGA gctcttctgc ccgcgaacgc 0 0 44.02 7.05 36.97 tRNAscan chrUn 460 136744395 136744469 View Pseudo TGC gtttatgaca tttagctttt 0 0 20.25 28.46 -8.21 Eufind chrUn 366 102009329 102009390 View Pseudo TGC caaaatacat ctccagattc 0 0 21.69 6.48 15.21 Eufind chrUn 793 50292197 50292124 View Pseudo TGG gaaaaatttg aaactttttg 0 0 21.82 28.82 -7.00 Eufind chrUn 794 50292009 50291936 View Pseudo TGG gaaaaatttg aaactttttg 0 0 21.82 28.82 -7.00 Eufind chrUn 795 50291821 50291748 View Pseudo TGG gaaaaatttg aaactttttg 0 0 21.82 28.82 -7.00 Eufind chrUn 796 50291163 50291090 View Pseudo TGG gaaaaatttg aaactttttg 0 0 21.82 28.82 -7.00 Eufind chrUn 797 50290975 50290902 View Pseudo TGG gaaaaatttg aaactttttg 0 0 21.82 28.82 -7.00 Eufind chrUn 798 50290787 50290714 View Pseudo TGG gaaaaatttg aaactttttg 0 0 21.82 28.82 -7.00 Eufind chrUn 111 33238336 33238407 View Pseudo TGG ggcaaggcgg attttttttg 0 0 23.69 19.99 3.70 Eufind chrUn 411 113449550 113449621 View Pseudo TGG gttccccagc attctttttt 0 0 35.34 34.80 0.54 Eufind chrUn 768 59023321 59023250 View Pseudo TGG tgagcggttt tttttttgtg 0 0 38.78 37.15 1.63 Eufind chrUn 742 65903709 65903636 View Pseudo TGT gctttaagtt actctttttt 0 0 29.59 41.30 -11.71 Eufind chrUn 741 65905223 65905151 View Pseudo TGT ctttcgacct aaaacatttt 0 0 29.95 51.61 -21.66 Eufind chrUn 89 25117674 25117747 View Pseudo TTC gcttgcggtg atttcttttt 0 0 20.19 29.84 -9.65 Eufind chrUn 799 49888441 49888368 View Pseudo TTC cattattagt tttctttttt 0 0 20.70 38.58 -17.88 Eufind chrUn 273 78444793 78444866 View Pseudo TTC ctattcagta aattttttaa 0 0 40.02 47.66 -7.64 Eufind chrUn 667 85389292 85389216 View Pseudo TTG ttctcaatgt actttttttt 0 0 22.56 31.26 -8.70 Eufind chrUn 550 124278009 124277936 View Pseudo TTG cacggtggga aacttttttg 0 0 23.20 26.32 -3.12 Eufind chrUn 872 25776918 25776847 View Pseudo TTG actttttgca tttcattttt 0 0 23.91 28.96 -5.05 Eufind chrUn 458 135458136 135458208 View Pseudo TTG ccacttttgt aacttttttt 0 0 23.92 47.23 -23.31 Eufind chrUn 557 122965092 122965020 View Pseudo TTG cggcgagagg aacttttttt 0 0 28.65 45.59 -16.94 Eufind chrUn 10 645109 645177 View Pseudo TTG gcaatgtgat cctattgttt 0 0 29.24 25.44 3.80 Eufind chrUn 801 49665322 49665259 View Pseudo TTT aaattgacgg gggttattgg 0 0 24.44 19.49 4.95 Eufind chrUn 172 50449844 50449914 View Pseudo TTT tctttcatct aaaccttttt 0 0 25.78 38.56 -12.78 Eufind chrUn 134 37128276 37128354 View Pseudo TTT ttggtggccg actttgagcc 0 0 25.92 1.07 24.85 Eufind chrUn 448 129698556 129698626 View Pseudo TTT ccgcacgcca agatgttttg 0 0 46.17 41.20 4.97 Eufind   Sequence Name tRNA # tRNA Bounds Link to Genome Browser tRNA Isotype Anticodon Upstream Region Downstream Region Intron Bounds Scores First-Pass Scanner Begin End Begin End Total (Cove) HMM 2' Str chrUn 319 87641344 87641429 View SeC(e) TCA actctgcgtt gttgttttta 0 0 55.88 0.00 0.00 Eufind   chrUn 434 121385612 121385689 View Ser ACT tcgagaattt actttttgaa 0 0 29.33 18.32 11.01 Eufind chrUn 467 146194881 146194965 View Ser AGA agtcggggct nnnnnnnnnn 0 0 39.46 23.25 16.21 Both chrUn 846 33699211 33699130 View Ser AGA gagaagagaa atgacctttt 0 0 79.86 47.56 32.30 Both chrUn 852 33238229 33238148 View Ser AGA tcaaacatca aatccttttt 0 0 79.86 47.56 32.30 Both chrUn 182 51830543 51830624 View Ser AGA tctcttccgt gagatttttt 0 0 80.44 48.88 31.56 Both chrUn 210 63438038 63438119 View Ser AGA ccaatttcgt ttaacgtttt 0 0 80.44 48.88 31.56 Both chrUn 279 80339325 80339406 View Ser AGA tcttcagcgt gatttccttt 0 0 80.44 48.88 31.56 Both chrUn 280 80386709 80386790 View Ser AGA tctccgccgt gatatctttt 0 0 80.44 48.88 31.56 Both chrUn 306 85109822 85109903 View Ser AGA tctccggtgt taaatctttt 0 0 80.44 48.88 31.56 Both chrUn 66 17240090 17240171 View Ser AGA attgaatcat taaatcttta 0 0 80.44 48.88 31.56 Both chrUn 67 17782956 17783037 View Ser AGA cctagacacc ttaaactttt 0 0 80.44 48.88 31.56 Both chrUn 7 519186 519267 View Ser AGA caacaaacat aatctttttt 0 0 80.44 48.88 31.56 Both chrUn 754 63436472 63436391 View Ser AGA ccactttcgt ttaacttttt 0 0 80.44 48.88 31.56 Both chrUn 8 625731 625812 View Ser AGA aaagacatgt aatctttttt 0 0 80.44 48.88 31.56 Both chrUn 847 33698795 33698714 View Ser AGA agacagatgt aatatttttg 0 0 80.44 48.88 31.56 Both chrUn 904 18931721 18931640 View Ser AGA tgcccatcgt ttaaactttt 0 0 80.44 48.88 31.56 Both chrUn 910 17780350 17780269 View Ser AGA cctagacacc ttaaactttt 0 0 80.44 48.88 31.56 Both chrUn 923 11426609 11426528 View Ser AGA gtttcatcgt gaacgttttt 0 0 80.44 48.88 31.56 Both chrUn 959 1678578 1678499 View Ser CGA nnnnnnnnnn gtaaactttt 0 0 25.37 13.73 11.64 Eufind chrUn 474 149271522 149271595 View Ser CGA atcttaagct aattnnnnnn 0 0 34.50 24.66 9.84 Eufind chrUn 642 95718626 95718545 View Ser CGA cctctctcgt aatttttttt 0 0 80.95 49.41 31.54 Both chrUn 208 63371548 63371629 View Ser CGA gccacaatgt aatccttttt 0 0 81.04 49.48 31.56 Both chrUn 368 103195508 103195589 View Ser CGA tcctcggtgt aattctcttt 0 0 81.04 49.48 31.56 Both chrUn 905 18931555 18931474 View Ser CGA ggtggaatgt aatccgtttt 0 0 81.53 49.97 31.56 Both chrUn 676 85110789 85110708 View Ser CGA tctccgtcgt aatccttttt 0 0 83.08 52.43 30.65 Both chrUn 70 18816728 18816809 View Ser GCT ccagcggttc attttttttt 0 0 58.92 51.26 7.66 Eufind chrUn 102 30191299 30191380 View Ser GCT tcagcggttt aatccttttt 0 0 66.35 55.08 11.27 Eufind chrUn 265 76601314 76601395 View Ser GCT gttgaaacgt aatccttttt 0 0 81.69 49.76 31.93 Both chrUn 551 124264727 124264646 View Ser GCT atcaagaagt aatctctttt 0 0 81.69 49.76 31.93 Both chrUn 71 18851956 18852037 View Ser GCT ctttcgacgt aatctctttt 0 0 81.69 49.76 31.93 Both chrUn 771 57927910 57927829 View Ser GCT ctcgaaatgt aatctttttt 0 0 81.69 49.76 31.93 Both chrUn 906 18854247 18854166 View Ser GCT atttcggcgt aatcgttttt 0 0 81.69 49.76 31.93 Both chrUn 907 18817968 18817887 View Ser GCT atttcggtgt aatctctttt 0 0 81.69 49.76 31.93 Both chrUn 939 6273184 6273103 View Ser GCT tttatttcgt aattgttttt 0 0 81.69 49.76 31.93 Both chrUn 952 3500322 3500241 View Ser GCT gagacccact aatctttttt 0 0 81.69 49.76 31.93 Both chrUn 656 88515634 88515553 View Ser TGA gtggagacgt gatcgttttt 0 0 67.26 50.51 16.75 Eufind chrUn 677 85107298 85107217 View Ser TGA tcttggtcgt ttacgttttt 0 0 77.77 45.43 32.34 Both chrUn 549 124598370 124598289 View Ser TGA tcttggtcgt ttacgttttt 0 0 78.24 45.90 32.34 Both chrUn 870 26741790 26741709 View Ser TGA tctaggttgt aatctctttt 0 0 80.51 51.04 29.47 Both chrUn 328 88518301 88518382 View Ser TGA ggagagacgt gatggttctt 0 0 81.14 52.08 29.06 Both chrUn 409 112669616 112669697 View Ser TGA tgtgagtcgt gatttttcat 0 0 81.14 52.08 29.06 Both chrUn 408 112666242 112666323 View Ser TGA agagaatcgt gattgaggtt 0 0 81.40 52.34 29.06 Both chrUn 45 9426007 9426088 View Ser TGA tcaatttcgt aattcttttg 0 0 81.49 52.43 29.06 Both chrUn 932 7996533 7996452 View Ser TGA aattggacgg aattcttttg 0 0 81.49 52.43 29.06 Both chrUn 19 1230897 1230978 View Ser TGA gatgttttgt tcgagttttg 0 0 82.50 52.17 30.33 Both chrUn 962 1232202 1232121 View Ser TGA ttattcgaat ttaagttttt 0 0 82.50 52.17 30.33 Both   chrUn 891 22281920 22281838 View Sup TTA gcttgcagga gttcctcttt 0 0 53.25 27.40 25.85 Eufind chrUn 31 3662789 3662874 View Sup TTA ttgtttttgt ttaactattt 0 0 59.34 26.55 32.79 Eufind   chrUn 663 86222012 86221941 View Thr AGT cacgccaact ccgaaacttt 0 0 58.08 51.15 6.93 Eufind chrUn 428 120632647 120632718 View Thr AGT tcgcgaatca ccgaaatttt 0 0 64.69 55.56 9.13 Eufind chrUn 103 30475782 30475853 View Thr AGT tctctcatgc ccgaactttt 0 0 85.45 60.72 24.73 Both chrUn 120 33515441 33515512 View Thr AGT aataatacgc ccgatatttt 0 0 85.45 60.72 24.73 Both chrUn 152 42473407 42473478 View Thr AGT tagctcgtcc ccgaaaaatt 0 0 85.45 60.72 24.73 Both chrUn 25 2279519 2279590 View Thr AGT agaaccacgc ccgaactttt 0 0 85.45 60.72 24.73 Both chrUn 292 82224066 82224137 View Thr AGT tacgatcagc ccgaaacttt 0 0 85.45 60.72 24.73 Both chrUn 294 82269656 82269727 View Thr AGT tccagtcagc ccgaaaaatt 0 0 85.45 60.72 24.73 Both chrUn 317 86140550 86140621 View Thr AGT ttcgccgtcc ccgaaacttt 0 0 85.45 60.72 24.73 Both chrUn 35 5410806 5410877 View Thr AGT tatgtcatgc ccgaaacttt 0 0 85.45 60.72 24.73 Both chrUn 398 110044873 110044944 View Thr AGT agacagtgtc ccgaactttt 0 0 85.45 60.72 24.73 Both chrUn 40 6633406 6633477 View Thr AGT gtttctgtcc ccgaaacttt 0 0 85.45 60.72 24.73 Both chrUn 449 131541912 131541983 View Thr AGT tttcccgtcc ccgaaatttt 0 0 85.45 60.72 24.73 Both chrUn 688 82228398 82228327 View Thr AGT tccgatcagc ccgaaacttt 0 0 85.45 60.72 24.73 Both chrUn 691 82206927 82206856 View Thr AGT tccaatcagc ccgaaacttt 0 0 85.45 60.72 24.73 Both chrUn 787 51060047 51059976 View Thr AGT cttgatcagc ccgaaacttt 0 0 85.45 60.72 24.73 Both chrUn 821 42467665 42467594 View Thr AGT aacatcgtct ccgaaacttt 0 0 85.45 60.72 24.73 Both chrUn 842 34901924 34901853 View Thr AGT tgccgccacc ccgaaacttt 0 0 85.45 60.72 24.73 Both chrUn 926 9522194 9522123 View Thr AGT tttcccgtcc ccgaaacttt 0 0 85.45 60.72 24.73 Both chrUn 949 4533510 4533439 View Thr AGT tctcctgtcc ccgaactttt 0 0 85.45 60.72 24.73 Both chrUn 196 59609357 59609428 View Thr CGT tgcatccatc atcttttctg 0 0 75.77 56.54 19.23 Both chrUn 702 79701426 79701355 View Thr CGT ggaagtgtgt tttttttttg 0 0 75.77 56.54 19.23 Both chrUn 75 20873619 20873690 View Thr CGT tcacagcgca atttttggaa 0 0 75.77 56.54 19.23 Both chrUn 772 57904313 57904242 View Thr CGT cgttggacat agggttttgc 0 0 75.77 56.54 19.23 Both chrUn 865 29554106 29554035 View Thr CGT accgaaacgt attctttttt 0 0 75.77 56.54 19.23 Both chrUn 187 56967870 56967941 View Thr CGT agtgacacta ttctattttg 0 0 79.99 57.00 22.99 Both chrUn 507 146194228 146194157 View Thr GGT aggtggccgc ctgactctct 0 0 71.32 45.37 25.95 Both chrUn 564 121387399 121387321 View Thr TGT tctaaaattt actttttgaa 0 0 31.05 17.73 13.32 Eufind chrUn 381 105365610 105365676 View Thr TGT cgttcccgtc nnnnnntccg 0 0 48.37 35.35 13.02 Eufind chrUn 264 76417607 76417678 View Thr TGT cacgccaact atttcttttt 0 0 64.57 53.11 11.46 Eufind chrUn 604 105344772 105344701 View Thr TGT cttttccgtc aatacttttt 0 0 70.87 47.87 23.00 Both chrUn 13 985009 985080 View Thr TGT cctcacatgc aatcattttt 0 0 75.24 52.60 22.64 Both chrUn 881 25048707 25048636 View Thr TGT tgcctccgtc aattgttttt 0 0 75.24 52.60 22.64 Both chrUn 968 560003 559932 View Thr TGT agttttcgtc tgacattttt 0 0 76.98 54.34 22.64 Both chrUn 600 105369507 105369436 View Thr TGT ccttcccgtc nnnnnnnnnn 0 0 78.78 55.79 22.99 Both chrUn 601 105364963 105364892 View Thr TGT cgttcccgtc gattctcttt 0 0 78.78 55.79 22.99 Both chrUn 602 105363167 105363096 View Thr TGT gcttcccgtc gattctcttt 0 0 78.78 55.79 22.99 Both chrUn 605 105279929 105279858 View Thr TGT tctttccggc attcgttttt 0 0 78.78 55.79 22.99 Both   chrUn 496 153526119 153526049 View Trp CCA gcaggcaccg ctagggcgac 0 0 68.68 49.67 19.01 Eufind chrUn 160 46627866 46627937 View Trp CCA tctccatcgt aagttttttt 0 0 71.83 47.21 24.62 Both chrUn 161 46631795 46631866 View Trp CCA tctccctcgt aagtgttttt 0 0 71.83 47.21 24.62 Both chrUn 331 90895797 90895868 View Trp CCA aatatttcat aagttttgaa 0 0 71.83 47.21 24.62 Both chrUn 340 96481821 96481892 View Trp CCA tgagaaacat aagttttttc 0 0 71.83 47.21 24.62 Both chrUn 382 105794599 105794670 View Trp CCA tctatttcat aatgtttttt 0 0 71.83 47.21 24.62 Both chrUn 452 133164869 133164940 View Trp CCA aatatttcat aagttttgga 0 0 71.83 47.21 24.62 Both chrUn 472 149173435 149173506 View Trp CCA tgagaaacat aatgttttgt 0 0 71.83 47.21 24.62 Both chrUn 501 148809955 148809884 View Trp CCA gaaaaaatac aagttttttc 0 0 71.83 47.21 24.62 Both chrUn 609 105161207 105161136 View Trp CCA gtctagacat aatgtttttt 0 0 71.83 47.21 24.62 Both chrUn 640 96477617 96477546 View Trp CCA gtctacctgt aagttttttc 0 0 71.83 47.21 24.62 Both chrUn 807 46633792 46633721 View Trp CCA tctccgcgat aagttttttt 0 0 71.83 47.21 24.62 Both chrUn 808 46580673 46580602 View Trp CCA cttctccaat aagttttgtt 0 0 71.83 47.21 24.62 Both chrUn 814 43581451 43581380 View Trp CCA ctgttaacat aagtttttgt 0 0 71.83 47.21 24.62 Both chrUn 834 37568801 37568730 View Trp CCA cggttttcat aagttttttt 0 0 71.83 47.21 24.62 Both chrUn 839 35354952 35354881 View Trp CCA tggttttcgt aactattttg 0 0 71.83 47.21 24.62 Both chrUn 954 2971109 2971038 View Trp CCA gagaaattat aagttttttt 0 0 71.83 47.21 24.62 Both   Sequence Name tRNA # tRNA Bounds Link to Genome Browser tRNA Isotype Anticodon Upstream Region Downstream Region Intron Bounds Scores First-Pass Scanner Begin End Begin End Total (Cove) HMM 2' Str chrUn 17 1042312 1042395 View Tyr GTA tacttgcgtg tttctttttt 1042349 1042359 76.75 50.12 26.63 Both chrUn 427 120624498 120624581 View Tyr GTA ttcttccgtg atctcttttt 120624535 120624545 75.98 49.34 26.64 Both chrUn 438 123768339 123768422 View Tyr GTA gactcccgtg attttttttt 123768376 123768386 74.05 47.41 26.64 Both chrUn 554 123874776 123874693 View Tyr GTA ttttcccgtg tttctttttt 123874739 123874729 75.98 49.34 26.64 Both chrUn 444 126594073 126594156 View Tyr GTA gactcccgtg attgtttttt 126594110 126594120 76.61 49.98 26.63 Both chrUn 533 131395020 131394937 View Tyr GTA ttcttccgtg atctcttttt 131394983 131394973 47.48 18.30 29.18 Both chrUn 522 137738346 137738263 View Tyr GTA gactcccgtg attgtttttc 137738309 137738299 48.12 18.94 29.18 Both chrUn 492 155316788 155316705 View Tyr GTA gactcccgtg attgtttttc 155316751 155316741 76.61 49.98 26.63 Both chrUn 1 17499 17582 View Tyr GTA tggcaacata tttctttttt 17536 17546 76.75 50.12 26.63 Both chrUn 895 21851407 21851324 View Tyr GTA actctccgtg tttttttgtc 21851370 21851360 76.75 50.12 26.63 Both chrUn 91 25593044 25593127 View Tyr GTA ttccggcgtg tttctttttc 25593081 25593091 76.75 50.12 26.63 Both chrUn 848 33487354 33487271 View Tyr GTA gaaacgcgtg tttctttttg 33487317 33487307 76.61 49.98 26.63 Both chrUn 119 33514658 33514741 View Tyr GTA tatgaacgtg tttctttttg 33514695 33514705 76.75 50.12 26.63 Both chrUn 121 33524714 33524797 View Tyr GTA gagaagcgtg tttctttttt 33524751 33524761 76.75 50.12 26.63 Both chrUn 163 47630568 47630651 View Tyr GTA ttttcccgtc gttttttttt 47630605 47630615 76.75 50.12 26.63 Both chrUn 186 56747032 56747115 View Tyr GTA gaacaacgtg tttctttttt 56747069 56747079 76.75 50.12 26.63 Both chrUn 777 57171062 57170979 View Tyr GTA ttccctcgtg tttctttttt 57171025 57171015 76.75 50.12 26.63 Both chrUn 207 63053257 63053340 View Tyr GTA ttccgttgtg gtctcttttt 63053294 63053304 76.75 50.12 26.63 Both chrUn 745 65679980 65679897 View Tyr GTA gtctctcgtg tttctttttg 65679943 65679933 76.75 50.12 26.63 Both chrUn 257 75033052 75033135 View Tyr GTA cagcggttca tttttttttc 75033089 75033099 62.95 48.04 14.91 Eufind chrUn 275 79209330 79209413 View Tyr GTA ttgactcgtg ttttcttttt 79209367 79209377 76.75 50.12 26.63 Both chrUn 300 83285156 83285239 View Tyr GTA tttctccgtg atttttttcg 83285193 83285203 76.75 50.12 26.63 Both chrUn 645 93821091 93821008 View Tyr GTA actcttcgta tttctttttt 93821054 93821044 76.75 50.12 26.63 Both   chrUn 316 86088330 86088414 View Undet ??? tacctcaccg aatgtttttg 0 0 22.04 15.91 6.13 Eufind chrUn 783 55489518 55489436 View Undet ??? cagaatattc taaagttttt 0 0 30.52 14.15 16.37 Eufind chrUn 167 48838747 48838829 View Undet ??? cagaatattc aaattatttt 0 0 31.60 14.87 16.73 Eufind chrUn 184 55617785 55617867 View Undet ??? cagaatattc gatatctttt 0 0 32.59 15.17 17.42 Eufind chrUn 315 86087478 86087560 View Undet ??? ctacctcacc aatgtttttt 0 0 33.43 21.26 12.17 Eufind chrUn 784 55345968 55345886 View Undet ??? cagaatattc gataactttt 0 0 36.22 15.46 20.76 Eufind chrUn 871 26521409 26521326 View Undet ??? agaaaatcag ttttcatttt 0 0 41.99 36.40 5.59 Eufind chrUn 383 105859070 105859141 View Undet ??? ttcgcaccgt aatctttttc 0 0 54.95 43.26 11.69 Eufind chrUn 964 1203448 1203381 View Undet ??? tgaaactcgt attctttttt 0 0 57.35 40.74 16.61 Eufind   chrUn 830 38093672 38093606 View Val AAC cttgatcagc ggtgtatttt 0 0 51.32 21.07 30.25 Eufind chrUn 494 154799151 154799080 View Val AAC atacccagcg cccctttttt 0 0 54.38 36.87 17.51 Eufind chrUn 625 101191327 101191255 View Val AAC acgccaacta gtcctatttt 0 0 55.54 46.12 9.42 Eufind chrUn 592 108074225 108074154 View Val AAC atcgcgcttt accctttttt 0 0 57.11 40.09 17.02 Eufind chrUn 569 119920096 119920024 View Val AAC nnnnnnnnnc cttgcttttt 0 0 65.22 38.14 27.08 Both chrUn 18 1182783 1182855 View Val AAC gcctccatga ttcaaacttt 0 0 66.24 37.33 28.91 Both chrUn 623 101198926 101198854 View Val AAC ttcttctgaa gttcattttt 0 0 68.23 41.06 27.17 Both chrUn 276 79892969 79893041 View Val AAC tactcccagc gttatctttt 0 0 71.10 42.19 28.91 Both chrUn 432 121301497 121301569 View Val AAC tccaccgtgc cttgggtttt 0 0 71.10 42.19 28.91 Both chrUn 779 56722938 56722866 View Val AAC ctcactcagc gttatttttt 0 0 71.10 42.19 28.91 Both chrUn 415 115798747 115798819 View Val AAC ctacgccagc cctgtttttt 0 0 73.98 51.08 22.90 Both chrUn 831 38091122 38091050 View Val AAC ttccatcaac gttctccttt 0 0 75.19 46.29 28.90 Both chrUn 534 131353881 131353809 View Val AAC atcaccctgt gttattgttt 0 0 75.70 46.86 28.84 Both chrUn 337 94764948 94765020 View Val AAC atatttcagc gtcttctttt 0 0 77.11 49.53 27.58 Both chrUn 540 126675720 126675648 View Val AAC ctcgatcagc gtcttctttt 0 0 77.11 49.53 27.58 Both chrUn 593 108054895 108054823 View Val AAC cttcgccagc cccctttttt 0 0 78.53 50.95 27.58 Both chrUn 778 57169714 57169642 View Val AAC ctatgccaga cctgtttttg 0 0 78.58 49.32 29.26 Both chrUn 85 24654666 24654738 View Val AAC ctctaccagc cgtgtttttt 0 0 78.58 49.32 29.26 Both chrUn 86 24656484 24656556 View Val AAC ctcaaccagc cctgtttttt 0 0 78.58 49.32 29.26 Both chrUn 27 2580032 2580104 View Val AAC atcaaccagc cccctttttc 0 0 79.07 50.16 28.91 Both chrUn 295 82651289 82651361 View Val AAC tctttcatgc ccctgttttt 0 0 79.07 50.16 28.91 Both chrUn 439 123991074 123991146 View Val AAC cttcaccagc cccctttttt 0 0 79.07 50.16 28.91 Both chrUn 571 118753428 118753356 View Val AAC cctagccagc cccttctttt 0 0 79.07 50.16 28.91 Both chrUn 637 97241581 97241509 View Val AAC ttcttcgtgc ctcttctttg 0 0 79.07 50.16 28.91 Both chrUn 653 89693096 89693024 View Val AAC ctcttccagc tttttctttt 0 0 79.07 50.16 28.91 Both chrUn 826 40423735 40423663 View Val AAC tcctttcatc tttttgtttt 0 0 79.07 50.16 28.91 Both chrUn 956 2574541 2574469 View Val AAC atcaaccagc cccccttttt 0 0 79.07 50.16 28.91 Both chrUn 894 21921410 21921327 View Val CAC ttgttttggt aacttttttc 0 0 48.80 23.37 25.43 Both chrUn 51 13256543 13256615 View Val CAC acatgccagc agttttggaa 0 0 78.64 53.34 25.30 Both chrUn 934 7908716 7908644 View Val CAC ttcggatcga acttttttcc 0 0 78.64 53.34 25.30 Both chrUn 100 28946592 28946664 View Val CAC atggccgagc actccatttt 0 0 79.04 53.75 25.29 Both chrUn 866 28944836 28944764 View Val CAC ttctcccgtc acttttcaac 0 0 79.04 53.75 25.29 Both chrUn 318 87604415 87604487 View Val CAC tccggcaagc actcttttgc 0 0 80.71 52.67 28.04 Both chrUn 476 150131466 150131538 View Val CAC tccggcaagc actcttttgc 0 0 80.71 52.67 28.04 Both chrUn 724 70134966 70134894 View Val CAC tccgacaagc actcttttta 0 0 80.71 52.67 28.04 Both chrUn 217 64969528 64969600 View Val CAC tacgaccaca actctttttt 0 0 83.58 58.28 25.30 Both chrUn 57 14974301 14974373 View Val TAC caaggccacc ctcgttttgt 0 0 78.88 53.59 25.29 Both chrUn 268 77184291 77184363 View Val TAC tctaccatgc atcttttttt 0 0 80.69 55.03 25.66 Both chrUn 98 27419355 27419427 View Val TAC aatttccgtg atttttagaa 0 0 80.93 55.27 25.66 Both chrUn 252 73508543 73508615 View Val TAC tcttttccgc tgtttttgcg 0 0 81.33 56.03 25.30 Both

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The Genomic tRNA Database is curated by Todd Lowe and Patricia Chan. Please email lowe@soe.ucsc.edu with any questions and comments. To submit corrections, please use our Bug and Request Tracking System.