tRNAscan-SE Analysis of the Corynebacterium diphtheriae Genome


[Main Overview] [Secondary Structures] [Analysis Notes]
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Predicted tRNA Secondary Structures


Click on "View tRNA" buttons to view 2-D tRNA structures

Cove-predicted tRNA secondary structures rendered by NAVIEW (c) 1988 Robert E. Bruccoleri


chr.trna42 (1923618-1923543)	Length: 76 bp
Type: Ala	Anticodon: GGC at 34-36 (1923585-1923583)	Score: 79.11
Seq: GGGGCTATGGCGCAGCTGGTAGCGCATCACACTGGCAGTGTGGGGGtCACGGGTTCGAATCCCGTTAGCTCCACCG
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna2 (11904-11976)	Length: 73 bp
Type: Ala	Anticodon: TGC at 34-36 (11937-11939)	Score: 87.27
Seq: GGGGCATTAGCTCAATTGGTAGAGCATCTGCTTTGCAAGCAGAAGGtCAGGAGTTCGATTCTCCTATGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna4 (19154-19226)	Length: 73 bp
Type: Ala	Anticodon: TGC at 34-36 (19187-19189)	Score: 87.27
Seq: GGGGCATTAGCTCAATTGGTAGAGCATCTGCTTTGCAAGCAGAAGGtCAGGAGTTCGATTCTCCTATGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna5 (20221-20293)	Length: 73 bp
Type: Ala	Anticodon: TGC at 34-36 (20254-20256)	Score: 87.27
Seq: GGGGCATTAGCTCAATTGGTAGAGCATCTGCTTTGCAAGCAGAAGGtCAGGAGTTCGATTCTCCTATGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna10 (154077-154152)	Length: 76 bp
Type: Arg	Anticodon: ACG at 34-36 (154110-154112)	Score: 79.49
Seq: GCGCCCGTAGCTCAACGGAtAGAGCATCTGACTACGGATCAGAAGGtTGGGGGTTCGAATCCCTCCGGGCGCACAA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna9 (151905-151980)	Length: 76 bp
Type: Arg	Anticodon: ACG at 34-36 (151938-151940)	Score: 79.49
Seq: GCGCCCGTAGCTCAACGGAtAGAGCATCTGACTACGGATCAGAAGGtTGGGGGTTCGAATCCCTCCGGGCGCACAA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna51 (1008593-1008518)	Length: 76 bp
Type: Arg	Anticodon: CCG at 34-36 (1008560-1008558)	Score: 70.77
Seq: GTCTCCGTAGCTCAGTGGAtAGAGCATTGGTTTCCGGTACCAAAGGtCGCAAGTTCGAATCTTGTCGGGGACACAA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna52 (795612-795540)	Length: 73 bp
Type: Arg	Anticodon: CCT at 34-36 (795579-795577)	Score: 76.14
Seq: GCCCTAGTAGCTCAGTGGAtAGAGCACGGCTCTCCTAAAGCCGGTGtCGGAGGTTCGATTCCTCTCTGGGGCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna44 (1861221-1861148)	Length: 74 bp
Type: Arg	Anticodon: TCT at 35-37 (1861187-1861185)	Score: 75.75
Seq: GCCTCCATAGCTCAGTGGAttAGAGCAGTCGGCTTCTACCCGATTGGtCGCGGGTTCGAATCCTGCTGGGGGCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna47 (1734761-1734689)	Length: 73 bp
Type: Asn	Anticodon: GTT at 34-36 (1734728-1734726)	Score: 80.50
Seq: TCCCCCATAGCTCAATTGGCAGAGCATTCGACTGTTAATCGAAGGGtTACTGGTTCGAGTCCAGTTGGGGGAG
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna39 (1944191-1944118)	Length: 74 bp
Type: Asp	Anticodon: GTC at 35-37 (1944157-1944155)	Score: 86.14
Seq: GGCCCTGTGGCGCAGTTGGTtAGCGCGCCGCCCTGTCACGGCGGAGGtCGCGGGTTCAAGTCCCGTCAGGGTCG
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna40 (1942751-1942675)	Length: 77 bp
Type: Asp	Anticodon: GTC at 35-37 (1942717-1942715)	Score: 86.76
Seq: GGCCCTGTGGCGCAGTTGGTtAGCGCGCCGCCCTGTCACGGCGGAGGtCGCGGGTTCAAGTCCCGTCAGGGTCGCAA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna29 (1410252-1410322)	Length: 71 bp
Type: Cys	Anticodon: GCA at 33-35 (1410284-1410286)	Score: 65.00
Seq: GGTGGAATGGCCGAGTGGTGAGGCAACGGTCTGCAAAACCGTGCACACGGGTTCGATTCCCGTTTCCACCT
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna21 (1100709-1100780)	Length: 72 bp
Type: Gln	Anticodon: CTG at 34-36 (1100742-1100744)	Score: 50.52
Seq: TGGCCTATGGTGTAATTGGCAACACTACGGTTTCTGGTACCGTCAtTCTAGGTTCGAGTCCTGGTAGGCCAG
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna22 (1100814-1100889)	Length: 76 bp
Type: Glu	Anticodon: CTC at 35-37 (1100848-1100850)	Score: 54.83
Seq: GCCCCGTTCGTCTAGCGGCctAGGACGTCGGCCTCTCACGCCGGTAACACGGGTTCAAATCCCGTACGGGGTACAA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna23 (1106131-1106206)	Length: 76 bp
Type: Glu	Anticodon: CTC at 35-37 (1106165-1106167)	Score: 54.83
Seq: GCCCCGTTCGTCTAGCGGCctAGGACGTCGGCCTCTCACGCCGGTAACACGGGTTCAAATCCCGTACGGGGTACAA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna38 (1944293-1944218)	Length: 76 bp
Type: Glu	Anticodon: TTC at 35-37 (1944259-1944257)	Score: 64.54
Seq: GCTCCCATCGTCTAGGGGCctAGGACACCGCCCTTTCACGGCGGCGACACGGGTTCGAATCCCGTTGGGAGTACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna35 (2209315-2209388)	Length: 74 bp
Type: Gly	Anticodon: CCC at 33-35 (2209347-2209349)	Score: 82.89
Seq: GCCGATGTAGTTCAATGGTAGAACATCAGCTTCCCAAGCTGAATACGCGGGTTCGATTCCCGTCATCGGCTCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna28 (1410141-1410213)	Length: 73 bp
Type: Gly	Anticodon: GCC at 34-36 (1410174-1410176)	Score: 86.03
Seq: GCGGATGTAGCGCAGTTGGTAGCGCATCACCTTGCCAAGGTGAGGGtCGCGAGTTCGAGTCTCGTCATCCGCT
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna26 (1409946-1410021)	Length: 76 bp
Type: Gly	Anticodon: GCC at 34-36 (1409979-1409981)	Score: 86.65
Seq: GCGGATGTAGCGCAGTTGGTAGCGCATCACCTTGCCAAGGTGAGGGtCGCGAGTTCGAGTCTCGTCATCCGCTCAA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna31 (1410435-1410510)	Length: 76 bp
Type: Gly	Anticodon: GCC at 34-36 (1410468-1410470)	Score: 86.65
Seq: GCGGATGTAGCGCAGTTGGTAGCGCATCACCTTGCCAAGGTGAGGGtCGCGAGTTCGAGTCTCGTCATCCGCTCAA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna45 (1842792-1842718)	Length: 75 bp
Type: Gly	Anticodon: TCC at 34-36 (1842759-1842757)	Score: 67.60
Seq: GGGAATGTCGTATAGTGGCtAATACCTCAGCCTTCCAAGCTGAAGACGCGGGTTCGATTCCCGTCATTCCCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna33 (1863910-1863985)	Length: 76 bp
Type: His	Anticodon: GTG at 34-36 (1863943-1863945)	Score: 74.50
Seq: GTGGCTGTAGTTCAGCTGGTAGAGCACCAGGTTGTGATCCTGGGTGtCGCGGGTTCGAGCCCCGTCAGCCACCCCG
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna1 (11818-11894)	Length: 77 bp
Type: Ile	Anticodon: GAT at 35-37 (11852-11854)	Score: 96.92
Seq: GGGCCTATAGCTCAGTCGGTtAGAGCGCATCGCTGATAACGATGAGGtCGCAAGTTCGATTCTTGCTAGGCCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna3 (19068-19144)	Length: 77 bp
Type: Ile	Anticodon: GAT at 35-37 (19102-19104)	Score: 96.92
Seq: GGGCCTATAGCTCAGTCGGTtAGAGCGCATCGCTGATAACGATGAGGtCGCAAGTTCGATTCTTGCTAGGCCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna50 (1129756-1129680)	Length: 77 bp
Type: Leu	Anticodon: CAA at 35-37 (1129722-1129720)	Score: 56.88
Seq: GCCCCTGTATCCCAATTGGCaGAGGAAACGGATTCAAAACCCGTGCAgTGTGAGTTCGAGTCTCACCAGGGGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>.........<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna6 (53080-53166)	Length: 87 bp
Type: Leu	Anticodon: CAG at 35-37 (53114-53116)	Score: 69.20
Seq: GCCCAGGTGGCGGAATTGGCaGACGCGCTGGCTTCAGGTGCCAGTGTTCGCAAGGACGTGGGGGTTCAAGTCCCCCCCTGGGCACAA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>....<<<<..>>>>>.......<<<<<<<<<<<<....
                    
chr.trna25 (1273184-1273272)	Length: 89 bp
Type: Leu	Anticodon: GAG at 34-36 (1273217-1273219)	Score: 56.56
Seq: GCCCGGGTGGCGGAATGGCaGACGCGCTAGCTTGAGGTGCTAGTGTCCTACTAaCGGACGTGGGGGTTCAAGTCCCCCCTCGGGCACAA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>.......<<<<..>>>>>.......<<<<<<<<<<<<....
                    
chr.trna20 (895059-895135)	Length: 77 bp
Type: Leu	Anticodon: TAA at 35-37 (895093-895095)	Score: 67.32
Seq: GCCCCCATAGCCCAATCGGCaGAGGCAATCGACTTAAAATCGATTCAgTGTGGGTTCGAGTCCCACTGGGGGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna43 (1894071-1893990)	Length: 82 bp
Type: Leu	Anticodon: TAG at 35-37 (1894037-1894035)	Score: 66.48
Seq: GCGCCCGTGGCGGAATTGGCaGACGCGCTGGATTTAGGTTCCAGTGTCTTAGGACGTGAGAGTTCAAGTCTCTCCGGGCGCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>....<<<..>>>>>.......<<<<<<<<<<<<.
                    
chr.trna34 (1866327-1866399)	Length: 73 bp
Type: Lys	Anticodon: CTT at 34-36 (1866360-1866362)	Score: 84.46
Seq: GCGCCATTAGCTCAATTGGCAGAGCAACTGACTCTTAATCAGTGGGtTCGGGGTTCAAGTCCCTGATGGCGCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna37 (1950226-1950151)	Length: 76 bp
Type: Lys	Anticodon: TTT at 34-36 (1950193-1950191)	Score: 80.63
Seq: GGGCCTTTAGCTCAGCTGGTAGAGCTACGGACTTTTAATCCGCAGGtCCCGGGTTCGAGCCCCGGAGGGCCCACAA
Str: >>>>>>>..>>>>........<<<<..>>>>.......<<<<......>>>>>.......<<<<<<<<<<<<....
                    
chr.trna16 (395164-395238)	Length: 75 bp
Type: Met	Anticodon: CAT at 33-35 (395196-395198)	Score: 77.37
Seq: GGCGGTGTAGCTCAGTGGTAGAGCAAACGACTCATAATCGTTGTGtCGAGAGTTCAATTCTCTCCATCGCTACTA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna18 (710975-711051)	Length: 77 bp
Type: Met	Anticodon: CAT at 35-37 (711009-711011)	Score: 78.91
Seq: CGCGGGGTGGAGCAGCTcGGTAGCTCGCTGGGCTCATAACCCAGAGGtCGTAGGTTCGAATCCTGCCCCCGCTACTA
Str: .>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.....
                    
chr.trna32 (1734940-1735013)	Length: 74 bp
Type: Met	Anticodon: CAT at 35-37 (1734974-1734976)	Score: 82.48
Seq: GGGGCTATAGCTCAGTCGGTtAGAGCCGCGGACTCATAATCCGTTGGtCCCGGGTTCGAGCCCCGGTGGCCCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna41 (1942655-1942580)	Length: 76 bp
Type: Phe	Anticodon: GAA at 34-36 (1942622-1942620)	Score: 81.96
Seq: GGCCAGATAGCTCAGTCGGTAGAGCACACGCCTGAAAAGTGTGGGGtCGCCAGTTCGATCCTGGCTCTGGCCACAA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna53 (264753-264677)	Length: 77 bp
Type: Pro	Anticodon: CGG at 35-37 (264719-264717)	Score: 89.76
Seq: CGGGATATGGCGCAGCTtGGTAGCGCGCCTCGTTCGGGACGAGGAGGtCGCAGGTTCAAATCCTGTTATCCCGACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna24 (1201374-1201450)	Length: 77 bp
Type: Pro	Anticodon: GGG at 35-37 (1201408-1201410)	Score: 76.20
Seq: CGGACTATGGCGCAGCTtGGTAGCGCACTTGACTGGGGGTCAAGGGGtCGCAGGTTCAAATCCTGTTAGTCCGACAA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna46 (1842377-1842301)	Length: 77 bp
Type: Pro	Anticodon: TGG at 35-37 (1842343-1842341)	Score: 87.00
Seq: CGGGACGTGGCGCAGTTtGGTAGCGCACCTGCTTTGGGAGCAGGGGGtCGCAGGTTCAAATCCTGTCGTCCCGACAA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna11 (190719-190791)	Length: 73 bp
Type: Arg	Anticodon: ACG at 31-33 (190749-190751)	Score: 20.62
Seq: GCACAGGTAGAGCAGAAtTCGAATCTGACTACGGATCAGAAGGtTGGGGGTTCGAATCCCTCCGGGCGCACAA
Str: >>.>..>....>.......<...>>>>>.......<<<<<.....>>>>>.......<<<<<<..<.<<....
                    
chr.trna19 (882605-882676)	Length: 72 bp
Type: Gln	Anticodon: TTG at 34-36 (882638-882640)	Score: 44.71
Seq: TTCCCCATGGTGTAATCGGCAACACTACGGTTTTTGGTACCGTCAtTCTAGGTTCGAGTCCTGGTGGGGAAG
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna12 (210284-210374)	Length: 91 bp
Type: Ser	Anticodon: CGA at 35-37 (210318-210320)	Score: 61.75
Seq: GGTAGCGTGTCCGAGCGGCcgAAGGTGTTCGCCTCGAAAGCGAATGTTGGGTAACCCCCAACCGCGGGTTCAAATCCCGCCGCTACCGCCA
Str: >>>>>>>...>>...........<<..>>>>>.......<<<<<.>>>>>>.....<<<<<<.>>>>>.......<<<<<<<<<<<<....
                    
chr.trna8 (151769-151857)	Length: 89 bp
Type: Ser	Anticodon: GCT at 35-37 (151803-151805)	Score: 53.90
Seq: GGAGACGTGCCAGAGCGGCcgAATGGGGCTCCCTGCTAAGGAGTTGACTTGTTTGCGCAGGTCCGGAGGTTCAAATCCTCTCGTCTCCG
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>>>>....<<<<<<..>>>>>.......<<<<<<<<<<<<.
                    
chr.trna54 (219222-219134)	Length: 89 bp
Type: Ser	Anticodon: GGA at 35-37 (219188-219186)	Score: 58.32
Seq: GGAGGATTCGACTAGCGGCctATGTCACACGCCTGGAACGCGTGCGGGTTTCACGACCCtCGTGGGTTCAAATCCCACATCCTCCGCAA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>>....<<<<...>>>>>.......<<<<<<<<<<<<....
                    
chr.trna7 (150357-150441)	Length: 85 bp
Type: Ser	Anticodon: TGA at 35-37 (150391-150393)	Score: 59.53
Seq: GGAGATGTGGCAGAGCGGCcgAATGCACTGGTCTTGAAAACCAGCGATGGGAAACCATCCCAGGGTTCAAATCCCTGCGTCTCCG
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>>....<<<<..>>>>>.......<<<<<<<<<<<<.
                    
chr.trna13 (305408-305483)	Length: 76 bp
Type: Thr	Anticodon: CGT at 34-36 (305441-305443)	Score: 81.42
Seq: GCCGCCTTAGCTCAGTCGGTAGAGCGCTTCACTCGTAATGAAAAGGtCGCGAGTTCGATTCTCGCAGGCGGCTCAA
Str: >>>>>>>..>>>>........<<<<..>>>>.......<<<<......>>>>>.......<<<<<<<<<<<<....
                    
chr.trna15 (395053-395125)	Length: 73 bp
Type: Thr	Anticodon: GGT at 34-36 (395086-395088)	Score: 75.88
Seq: GCCCCCTTAGCTCAGTCGGCAGAGCGTTTCCATGGTAAGGAAAAGGtCGACAGTTCGATTCTGTCAGGGGGCT
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna36 (2012035-2011960)	Length: 76 bp
Type: Thr	Anticodon: TGT at 34-36 (2012002-2012000)	Score: 82.85
Seq: GCTGGAGTGGCGCAATTGGTAGCGCAACGCACTTGTAATGCGTAGGtTGTGGGTTCAAGTCCCATCTCCAGCTCAA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna17 (395264-395339)	Length: 76 bp
Type: Trp	Anticodon: CCA at 34-36 (395297-395299)	Score: 77.97
Seq: AGGGGCGTAGTTCAATTGGTAGAGCAACGGTCTCCAAAACCGTAGGtTGCAGGTTCAAGTCCTGTCGCCCCTGCAA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna14 (394779-394860)	Length: 82 bp
Type: Tyr	Anticodon: GTA at 35-37 (394813-394815)	Score: 51.27
Seq: GCCAGGTTGCCCGAGCGGCcaAAGGGAGCGGACTGTAAATCCGTCGGCAtTGCCTaCAGAAGTTCGAATCTTCTACCTGGCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>.<<<<...>>>>>.......<<<<<<<<<<<<.
                    
chr.trna49 (1409657-1409586)	Length: 72 bp
Type: Val	Anticodon: CAC at 33-35 (1409625-1409623)	Score: 74.63
Seq: GGTCCTATGGCTCAGTGGAAGAGCGTTCCGTTCACACCGGAAAGGtCGCTGGTTCGATCCCAGCTAGGACCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna27 (1410036-1410110)	Length: 75 bp
Type: Val	Anticodon: GAC at 33-35 (1410068-1410070)	Score: 74.38
Seq: GCGCGTTTAGCTCAGCGGGAGAGCGCTTCCCTGACACGGAAGAGGtCACTGGTTCAATCCCAGTATCGCGCACAA
Str: >>>>>.>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<.<<<<<....
                    
chr.trna30 (1410330-1410404)	Length: 75 bp
Type: Val	Anticodon: GAC at 33-35 (1410362-1410364)	Score: 74.38
Seq: GCGCGTTTAGCTCAGCGGGAGAGCGCTTCCCTGACACGGAAGAGGtCACTGGTTCAATCCCAGTATCGCGCACAA
Str: >>>>>.>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<.<<<<<....
                    
chr.trna48 (1722527-1722452)	Length: 76 bp
Type: Val	Anticodon: TAC at 34-36 (1722494-1722492)	Score: 80.78
Seq: GCGCCTTTAGCTCAGCTGGGAGAGCAGCTGGTTTACACCCAGCAGGtCGGCGGTTCGATCCCGTCAGGGCGCACAA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
         


The Genomic tRNA Database is curated by Todd Lowe and Patricia Chan. Please email lowe@soe.ucsc.edu with any questions and comments. To submit corrections, please use our Bug and Request Tracking System.