tRNAscan-SE Analysis of the Clostridium tetani E88 Genome

[Main Overview] [Secondary Structures]	[Analysis Notes]
[tRNAs by Isotype] [tRNAs by Locus]	[Run Options/Stats]
[tRNA Alignments][FASTA Seqs]	[Genome DB] [Genome Seq]

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[GtRNAdb Home] [tRNAscan-SE Server] [Lowe Lab] [Other Links]

Predicted tRNA Secondary Structures

Click on "View tRNA" buttons to view 2-D tRNA structures

chr.trna47 (38326-38251)	Length: 76 bp
Type: Ala	Anticodon: TGC at 34-36 (38293-38291)	Score: 90.91
Seq: GGGGGTATAGCTCAGCTGGGAGAGCACCTGCCTTGCACGCAGGGGGtCAAGAGTTCGAATCTCTTTATCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna17 (566657-566732)	Length: 76 bp
Type: Ala	Anticodon: TGC at 34-36 (566690-566692)	Score: 93.93
Seq: GGGGGTATAGCTCAGTTGGGAGAGCACCTGCCTTGCAAGCAGGGGGtCAGGAGTTCGAATCTCCTTATCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna26 (2793741-2793666)	Length: 76 bp
Type: Ala	Anticodon: TGC at 34-36 (2793708-2793706)	Score: 93.93
Seq: GGGGGTATAGCTCAGTTGGGAGAGCACCTGCCTTGCAAGCAGGGGGtCAGGAGTTCGAATCTCCTTATCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna50 (28295-28219)	Length: 77 bp
Type: Arg	Anticodon: ACG at 35-37 (28261-28259)	Score: 81.94
Seq: GCACCGGTAGCTCAGTTGGAtAGAGTAGCTGGCTACGAACCAGTTGGtCGGGGGTTCGAATCCTCTCCGGTGTACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna51 (26259-26183)	Length: 77 bp
Type: Arg	Anticodon: CCT at 35-37 (26225-26223)	Score: 78.82
Seq: GCGCTCGTAGCTCAGTTGGAtAGAGCAGTGGTTTCCTAAACCACGTGcCAGGGGTTCAATTCCTCTCGGGCGCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna40 (2523461-2523385)	Length: 77 bp
Type: Arg	Anticodon: TCG at 35-37 (2523427-2523425)	Score: 81.89
Seq: GCGCCCATAGCTCAGCTGGAtAGAGTTACGGACTTCGAATCCGGAGGtCACAGGTTCGACTCCTGTTGGGCGCACCA
Str: >>>>>>>..>>>>.........<<<<..>>>>.......<<<<......>>>>>.......<<<<<<<<<<<<....

chr.trna32 (2524175-2524099)	Length: 77 bp
Type: Arg	Anticodon: TCT at 35-37 (2524141-2524139)	Score: 86.55
Seq: GCGTCTTTAGCTCAGCTGGAtAGAGCAACGGCCTTCTAAGCCGTGTGcCAGGGGTTCGACTCCCTTAAGACGCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna10 (172150-172224)	Length: 75 bp
Type: Asn	Anticodon: GTT at 33-35 (172182-172184)	Score: 83.05
Seq: TCCGTGGTAGCTCAATGGTGGAGCATTCGGCTGTTAACCGAAGGGtTGAAGGTTCGAATCCTTTCCACGGAGCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna19 (570186-570260)	Length: 75 bp
Type: Asn	Anticodon: GTT at 33-35 (570218-570220)	Score: 83.05
Seq: TCCGTGGTAGCTCAATGGTGGAGCATTCGGCTGTTAACCGAAGGGtTGAAGGTTCGAATCCTTTCCACGGAGCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna28 (2788520-2788446)	Length: 75 bp
Type: Asn	Anticodon: GTT at 33-35 (2788488-2788486)	Score: 83.05
Seq: TCCGTGGTAGCTCAATGGTGGAGCATTCGGCTGTTAACCGAAGGGtTGAAGGTTCGAATCCTTTCCACGGAGCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna3 (82507-82584)	Length: 78 bp
Type: Asp	Anticodon: GTC at 36-38 (82542-82544)	Score: 91.34
Seq: GGCCCAGTGGCTCAGTTGGTttAGAGTGCCGGCCTGTCACGCCGGAGGtCGAGGGTTCGAGTCCCTTCTGGGTCGCCA
Str: >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna43 (2414867-2414793)	Length: 75 bp
Type: Cys	Anticodon: GCA at 33-35 (2414835-2414833)	Score: 72.76
Seq: GGCACTATAGCCAAGTGGTAAGGCAGAGGTCTGCAAAACCTCTATtCCCCAGTTCAAATCTGGGTGGTGCCTCCA
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna12 (182817-182891)	Length: 75 bp
Type: Cys	Anticodon: GCA at 33-35 (182849-182851)	Score: 78.45
Seq: GGCGCTATAGCCAAGTGGTAAGGCAGAGGTCTGCAAAACCTCTATtCCCCGGTTCAAATCCGGGTGGCGCCTCCA
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna45 (326445-326370)	Length: 76 bp
Type: Gln	Anticodon: CTG at 33-35 (326413-326411)	Score: 68.64
Seq: TGCCCATTAGCCAAATGGTAAGGCACCTGTCTCTGGAACAGGCACTGTGCTGGTTCGAATCCAGCATGGGCAGCCA
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<......>>>>>.......<<<<<<<<<<<<....

chr.trna35 (2523922-2523848)	Length: 75 bp
Type: Gln	Anticodon: TTG at 33-35 (2523890-2523888)	Score: 72.14
Seq: TGGGATGTCGCCAAGTGGTAAGGCACGGGACTTTGACTTCCGCATtCGTAGGTTCGAATCCTGCCATCCCAGCCA
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna20 (713286-713360)	Length: 75 bp
Type: Glu	Anticodon: CTC at 34-36 (713319-713321)	Score: 69.40
Seq: GGTCTCTTGGTCAAGTGGTtAAGACGCCACCCTCTCAAGGTGGAAtCGGGAGTTCGATCCTCCTAGAGACTGCCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....

chr.trna1 (82338-82412)	Length: 75 bp
Type: Glu	Anticodon: TTC at 34-36 (82371-82373)	Score: 75.70
Seq: GGCCCCTTGGTCAAGTGGTtAAGACACCACCCTTTCACGGTGGTAACATGGGTTCGAATCCCGTAGGGGTCACCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....

chr.trna38 (2523642-2523568)	Length: 75 bp
Type: Gly	Anticodon: GCC at 33-35 (2523610-2523608)	Score: 84.37
Seq: GCGGGAGTGGCTCAGTGGTAGAGCGTCACCTTGCCAAGGTGAACGtCGTGGGTTCGAATCCCATCTTCCGCTCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna42 (2414948-2414874)	Length: 75 bp
Type: Gly	Anticodon: GCC at 33-35 (2414916-2414914)	Score: 84.37
Seq: GCGGGAGTGGCTCAGTGGTAGAGCGTCACCTTGCCAAGGTGAACGtCGTGGGTTCGAATCCCATCTTCCGCTCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna31 (2524253-2524180)	Length: 74 bp
Type: Gly	Anticodon: TCC at 33-35 (2524221-2524219)	Score: 77.14
Seq: GCGGGTGTAGCTCAATGGTAGAGTTCCAGCCTTCCAAGCTGGCTGTGAGAGTTCGATTCTCTTCACCCGCTCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....

chr.trna39 (2523556-2523483)	Length: 74 bp
Type: Gly	Anticodon: TCC at 33-35 (2523524-2523522)	Score: 77.14
Seq: GCGGGTGTAGCTCAATGGTAGAGTTCCAGCCTTCCAAGCTGGCTGTGAGAGTTCGATTCTCTTCACCCGCTCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....

chr.trna34 (2524007-2523932)	Length: 76 bp
Type: His	Anticodon: GTG at 34-36 (2523974-2523972)	Score: 74.72
Seq: GTGGGTATAGCTCAGGTGGTAGAGCGCCAGATTGTGGTTCTGGATGcCAAGGGTTCGAGTCCCTTTATCCACCCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna18 (566743-566819)	Length: 77 bp
Type: Ile	Anticodon: GAT at 35-37 (566777-566779)	Score: 98.32
Seq: GGGCTTATAGCTCAGCTGGTtAGAGCGCACGCCTGATAAGCGTGAGGtCGATGGTTCGAGTCCATTTAAGCCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna24 (2797231-2797155)	Length: 77 bp
Type: Ile	Anticodon: GAT at 35-37 (2797197-2797195)	Score: 98.32
Seq: GGGCTTATAGCTCAGCTGGTtAGAGCGCACGCCTGATAAGCGTGAGGtCGATGGTTCGAGTCCATTTAAGCCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna27 (2791914-2791838)	Length: 77 bp
Type: Ile	Anticodon: GAT at 35-37 (2791880-2791878)	Score: 98.32
Seq: GGGCTTATAGCTCAGCTGGTtAGAGCGCACGCCTGATAAGCGTGAGGtCGATGGTTCGAGTCCATTTAAGCCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna22 (2243062-2243150)	Length: 89 bp
Type: Leu	Anticodon: CAA at 35-37 (2243096-2243098)	Score: 73.63
Seq: GCCGAAGTGGTGGAACTGGCaGACGCGCTGGATTCAAAATCCAGTGGGGCTTAAaCCTCGTGCGGGTTCGATTCCCGCCTTCGGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>.......<<<..>>>>>.......<<<<<<<<<<<<....

chr.trna44 (2236411-2236326)	Length: 86 bp
Type: Leu	Anticodon: GAG at 35-37 (2236377-2236375)	Score: 58.71
Seq: GCAGGTGTGCTGGAATTGGCaGACAGGCACGCTTGAGGTGCGTGTGTTCAACGAACGTATGGGTTCAAGTCCCTTCACCTGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>...<<<<..>.>>>.......<<<.<<<<<<<<....

chr.trna5 (159533-159623)	Length: 91 bp
Type: Leu	Anticodon: TAA at 35-37 (159567-159569)	Score: 76.91
Seq: GCCGAAGTGGCGGAACTGGCaGACGCACAGGACTTAAAATCCTGCGGTGTTTTGAAGCACCGTACCGGTTCGATTCCGGTCTTCGGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>>....<<<<<<..>>>>>.......<<<<<<<<<<<<....

chr.trna8 (159813-159903)	Length: 91 bp
Type: Leu	Anticodon: TAA at 35-37 (159847-159849)	Score: 76.91
Seq: GCCGAAGTGGCGGAACTGGCaGACGCACAGGACTTAAAATCCTGCGGTGTTTTGAAGCACCGTACCGGTTCGATTCCGGTCTTCGGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>>....<<<<<<..>>>>>.......<<<<<<<<<<<<....

chr.trna37 (2523745-2523662)	Length: 84 bp
Type: Leu	Anticodon: TAG at 35-37 (2523711-2523709)	Score: 73.77
Seq: GCAGGTGTGGCGGAATTGGCaGACGCACTAGACTTAGGATCTAGCGCCTTTGGCGTGGGGGTTCGACTCCCTTCACCTGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>...<<<..>>>>>.......<<<<<<<<<<<<....

chr.trna33 (2524094-2524019)	Length: 76 bp
Type: Lys	Anticodon: CTT at 34-36 (2524061-2524059)	Score: 91.25
Seq: GTGCCATTAGCTCAGTTGGTAGAGCACCTGACTCTTAATCAGGGTGtCCAGGGTTCGACTCCCTGATGGCGCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna36 (2523844-2523769)	Length: 76 bp
Type: Lys	Anticodon: TTT at 34-36 (2523811-2523809)	Score: 86.50
Seq: GATCCACTAGCTCAGTCGGTAGAGCACATGACTTTTAATCATGGTGtCCGGGGTTCGATTCCCCGGTGGATCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna54 (5324-5249)	Length: 76 bp
Type: Lys	Anticodon: TTT at 34-36 (5291-5289)	Score: 86.50
Seq: GATCCACTAGCTCAGTCGGTAGAGCACATGACTTTTAATCATGGTGtCCGGGGTTCGATTCCCCGGTGGATCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna6 (159635-159710)	Length: 76 bp
Type: Met	Anticodon: CAT at 34-36 (159668-159670)	Score: 84.32
Seq: CGCGGGGTGGAGCAGCTGGTAGCTCGTCGGGCTCATAACCCGAAGGtCGTAGGTTCAAGTCCTACCTCCGCAACCA
Str: .>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.....

chr.trna9 (159915-159990)	Length: 76 bp
Type: Met	Anticodon: CAT at 34-36 (159948-159950)	Score: 84.32
Seq: CGCGGGGTGGAGCAGCTGGTAGCTCGTCGGGCTCATAACCCGAAGGtCGTAGGTTCAAGTCCTACCTCCGCAACCA
Str: .>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.....

chr.trna7 (159731-159807)	Length: 77 bp
Type: Met	Anticodon: CAT at 35-37 (159765-159767)	Score: 88.08
Seq: GGCGGAATAGCTCAGCTGGCtAGAGCATTCGGTTCATACCCGAAGTGtCGTAGGTTCAAGTCCTATTTCCGCTACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna25 (2793824-2793748)	Length: 77 bp
Type: Met	Anticodon: CAT at 35-37 (2793790-2793788)	Score: 94.88
Seq: GGATCTTTAGCTCAGCTGGTtAGAGCAACCGGCTCATAACCGGTAGGtCCGGGGTTCGAGTCCCTGAAGGTCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna46 (38408-38332)	Length: 77 bp
Type: Met	Anticodon: CAT at 35-37 (38374-38372)	Score: 94.88
Seq: GGATCTTTAGCTCAGCTGGTtAGAGCAACCGGCTCATAACCGGTAGGtCCGGGGTTCGAGTCCCTGAAGGTCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna11 (181014-181089)	Length: 76 bp
Type: Phe	Anticodon: GAA at 34-36 (181047-181049)	Score: 85.71
Seq: GGCTCGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGtCCCTGGTTCGATTCCTGGTCGAGCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>.>>.......<<.<<<<<<<<<....

chr.trna41 (2415029-2414954)	Length: 76 bp
Type: Phe	Anticodon: GAA at 34-36 (2414996-2414994)	Score: 85.71
Seq: GGCTCGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGtCCCTGGTTCGATTCCTGGTCGAGCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>.>>.......<<.<<<<<<<<<....

chr.trna21 (1206667-1206742)	Length: 76 bp
Type: Pro	Anticodon: GGG at 34-36 (1206700-1206702)	Score: 75.93
Seq: CTGGGTATAGCGCAGATGGTAGCGCGCATGCATGGGGTGCATGAGGtCGCAGGTTCAAGTCCTGTTACTCAGACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna30 (2524339-2524264)	Length: 76 bp
Type: Pro	Anticodon: TGG at 34-36 (2524306-2524304)	Score: 82.05
Seq: CGGGGTGTGGCGCAGATGGGAGCGCGCGTGGTTTGGGACCATGAGGtCGCAGGTTCAAGCCCTGTCACCCCGACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna52 (25606-25515)	Length: 92 bp
Type: Ser	Anticodon: CGA at 35-37 (25572-25570)	Score: 56.78
Seq: GGAGAGATGTCCGAGAGGTcgAAGGTGGTGGTCTCGAAAACCATTATACAGTAACAACTGTATCGAGGGTTCAAATCCCTCTCTCTCCGCCA
Str: >>>>>>>...>>...........<<..>>>>>.......<<<<<.>>>>>>>....<<<<<<<.>>>>>.......<<<<<<<<<<<<....

chr.trna49 (28435-28345)	Length: 91 bp
Type: Ser	Anticodon: GCT at 35-37 (28401-28399)	Score: 66.57
Seq: GGAGAAATACTCAAGAGGTcgAAGAGGCGCCCCTGCTAAGGGCGTAGGTCGGGTAACCGGCACGAGGGTTCAAATCCCTCTTTCTCCGCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<...>>>>>....<<<<<..>>>>>.......<<<<<<<<<<<<....

chr.trna53 (24292-24203)	Length: 90 bp
Type: Ser	Anticodon: GGA at 35-37 (24258-24256)	Score: 71.33
Seq: GGAGAGATGTCCGAGAGGTtgAAGGAGCACGCCTGGAAAGCGTGTGTAGGGGCAACTCTACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>>....<<<<<<.>>>>>.......<<<<<<<<<<<<....

chr.trna48 (28553-28463)	Length: 91 bp
Type: Ser	Anticodon: TGA at 36-38 (28518-28516)	Score: 77.44
Seq: GGAAAGATGGTCGAGTTGGTttAAGGCACCGGTCTTGAAAACCGGCGTACGGGTGACCGTACCGTGGGTTCGAATCCCACTCTTTCCGCCA
Str: >>>>>>>..>>>............<<<.>>>>>.......<<<<<.>>>>>>....<<<<<<.>>>>>.......<<<<<<<<<<<<....

chr.trna29 (2765679-2765604)	Length: 76 bp
Type: Thr	Anticodon: GGT at 34-36 (2765646-2765644)	Score: 86.12
Seq: GCCCATGTAGCTCAGTAGGTAGAGTGCCACCTTGGTAAGGTGGAGGtCACCGGTTCAATCCCGGTCATGGGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna13 (302847-302922)	Length: 76 bp
Type: Thr	Anticodon: TGT at 34-36 (302880-302882)	Score: 88.90
Seq: GCTGGCATGGCTCAATTGGCAGAGCAGCTGACTTGTAATCAGCAGGtTGTAGGTTCAAGTCCTATTGCCAGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna15 (303065-303140)	Length: 76 bp
Type: Thr	Anticodon: TGT at 34-36 (303098-303100)	Score: 88.90
Seq: GCTGGCATGGCTCAATTGGCAGAGCAGCTGACTTGTAATCAGCAGGtTGTAGGTTCAAGTCCTATTGCCAGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna4 (82592-82667)	Length: 76 bp
Type: Thr	Anticodon: TGT at 34-36 (82625-82627)	Score: 88.90
Seq: GCTGGCATGGCTCAATTGGCAGAGCAGCTGACTTGTAATCAGCAGGtTGTAGGTTCAAGTCCTATTGCCAGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna23 (2577708-2577783)	Length: 76 bp
Type: Trp	Anticodon: CCA at 34-36 (2577741-2577743)	Score: 72.06
Seq: AGGGGTATAGCTCAATTGGTAGAGTAGCGGTCTCCAAAACCGTTGGtTCCGGGTTCAAGTCCTCGTGCCCCTGCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>.>>>.......<<<.<<<<<<<<....

chr.trna14 (302928-303013)	Length: 86 bp
Type: Tyr	Anticodon: GTA at 35-37 (302962-302964)	Score: 66.49
Seq: GGAGGAGTTCCCGAGTGGCcaAAGGGGGCAGACTGTAAATCTGTTGGCTTTCGCCTtCGATGGTTCGAATCCGTCCTCCTCCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>....<<<...>>>>>.......<<<<<<<<<<<<....

chr.trna16 (303146-303231)	Length: 86 bp
Type: Tyr	Anticodon: GTA at 35-37 (303180-303182)	Score: 66.49
Seq: GGAGGAGTTCCCGAGTGGCcaAAGGGGGCAGACTGTAAATCTGTTGGCTTTCGCCTtCGATGGTTCGAATCCGTCCTCCTCCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>....<<<...>>>>>.......<<<<<<<<<<<<....

chr.trna2 (82424-82499)	Length: 76 bp
Type: Val	Anticodon: TAC at 34-36 (82457-82459)	Score: 95.51
Seq: GGGCGCATAGCTCAGCTGGGAGAGCACCTGCCTTACAAGCAGGGGGtCACAGGTTCGAGCCCTGTTGTGCCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

The Genomic tRNA Database is curated by Todd Lowe and Patricia Chan. Please email lowe@soe.ucsc.edu with any questions and comments. To submit corrections, please use our Bug and Request Tracking System.