tRNAscan-SE Analysis of the Burkholderia mallei ATCC 23344 Genome

[Main Overview] [Secondary Structures]	[Analysis Notes]
[tRNAs by Isotype] [tRNAs by Locus]	[Run Options/Stats]
[tRNA Alignments][FASTA Seqs]	[Genome DB] [Genome Seq]

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[GtRNAdb Home] [tRNAscan-SE Server] [Lowe Lab] [Other Links]

Predicted tRNA Secondary Structures

Click on "View tRNA" buttons to view 2-D tRNA structures

chr1.trna20 (2885283-2885208)	Length: 76 bp
Type: Ala	Anticodon: CGC at 34-36 (2885250-2885248)	Score: 84.28
Seq: GGGGCGGTAGCTCAGCTGGGAGAGCGTCGCGTTCGCAATGCGAAGGtCGGGAGTTCGATCCTCCTCCGCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr1.trna34 (1661599-1661524)	Length: 76 bp
Type: Ala	Anticodon: GGC at 34-36 (1661566-1661564)	Score: 86.46
Seq: GGGGGTATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAGGtCAGCGGTTCGATCCCGCTTACCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr1.trna27 (2676133-2676058)	Length: 76 bp
Type: Ala	Anticodon: TGC at 34-36 (2676100-2676098)	Score: 90.89
Seq: GGGGGCATAGCTCAGCTGGGAGAGCACCTGCTTTGCAAGCAGGGGGtCGTCGGTTCGATCCCGTCTGCCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>.>>>.......<<<.<<<<<<<<....

chr1.trna31 (1883498-1883423)	Length: 76 bp
Type: Ala	Anticodon: TGC at 34-36 (1883465-1883463)	Score: 90.89
Seq: GGGGGCATAGCTCAGCTGGGAGAGCACCTGCTTTGCAAGCAGGGGGtCGTCGGTTCGATCCCGTCTGCCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>.>>>.......<<<.<<<<<<<<....

chr2.trna3 (556655-556730)	Length: 76 bp
Type: Ala	Anticodon: TGC at 34-36 (556688-556690)	Score: 90.89
Seq: GGGGGCATAGCTCAGCTGGGAGAGCACCTGCTTTGCAAGCAGGGGGtCGTCGGTTCGATCCCGTCTGCCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>.>>>.......<<<.<<<<<<<<....

chr2.trna5 (888169-888244)	Length: 76 bp
Type: Ala	Anticodon: TGC at 34-36 (888202-888204)	Score: 90.89
Seq: GGGGGCATAGCTCAGCTGGGAGAGCACCTGCTTTGCAAGCAGGGGGtCGTCGGTTCGATCCCGTCTGCCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>.>>>.......<<<.<<<<<<<<....

chr1.trna13 (2184882-2184958)	Length: 77 bp
Type: Arg	Anticodon: ACG at 35-37 (2184916-2184918)	Score: 87.10
Seq: GCGGCTGTAGCTCAGTTGGAtAGAGTACTTGGCTACGAACCAAGGGGtCGTGGGTTCGAATCCTGCCAGCCGCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr1.trna14 (2185018-2185094)	Length: 77 bp
Type: Arg	Anticodon: ACG at 35-37 (2185052-2185054)	Score: 87.10
Seq: GCGGCTGTAGCTCAGTTGGAtAGAGTACTTGGCTACGAACCAAGGGGtCGTGGGTTCGAATCCTGCCAGCCGCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr1.trna18 (3109428-3109503)	Length: 76 bp
Type: Arg	Anticodon: CCG at 34-36 (3109461-3109463)	Score: 82.41
Seq: GCGCCCGTAGCTCAATGGAtAGAGTACTGCCCTCCGAAGGCAGGGGtTGCTGGTTCGATCCCAGCCGGGCGCGCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr1.trna45 (527853-527779)	Length: 75 bp
Type: Arg	Anticodon: CCT at 34-36 (527820-527818)	Score: 72.32
Seq: CTCCCCGTAGTTCAATGGAtAGAACAAGCGCCTCCTAAGCGCTAGATACAGGTTCGATTCCTGTCGGGGGGACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....

chr2.trna8 (909390-909314)	Length: 77 bp
Type: Arg	Anticodon: TCT at 35-37 (909356-909354)	Score: 86.86
Seq: CCGCCCTTAGCTCAGTCGGAtAGAGCAACGGCCTTCTAAGCCGTAGGtCACACGTTCGAATCGTGTAGGGCGGGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr1.trna43 (534815-534740)	Length: 76 bp
Type: Asn	Anticodon: GTT at 34-36 (534782-534780)	Score: 85.87
Seq: TCCCCGATAGCTCAGTCGGTAGAGCGCCGGACTGTTAATCCGTAGGtCCCTGGTTCGAGCCCAGGTCGGGGAGCCA
Str: >>>>>>>..>>>>........<<<<..>>>>.......<<<<......>>>>>.......<<<<<<<<<<<<....

chr1.trna44 (534650-534575)	Length: 76 bp
Type: Asn	Anticodon: GTT at 34-36 (534617-534615)	Score: 85.87
Seq: TCCCCGATAGCTCAGTCGGTAGAGCGCCGGACTGTTAATCCGTAGGtCCCTGGTTCGAGCCCAGGTCGGGGAGCCA
Str: >>>>>>>..>>>>........<<<<..>>>>.......<<<<......>>>>>.......<<<<<<<<<<<<....

chr1.trna36 (1661216-1661140)	Length: 77 bp
Type: Asp	Anticodon: GTC at 35-37 (1661182-1661180)	Score: 95.34
Seq: GGAGCGGTAGTTCAGTCGGTtAGAATACCGGCCTGTCACGCCGGGGGtCGCGGGTTCGAGTCCCGTCCGCTCCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr1.trna39 (1512267-1512191)	Length: 77 bp
Type: Asp	Anticodon: GTC at 35-37 (1512233-1512231)	Score: 95.34
Seq: GGAGCGGTAGTTCAGTCGGTtAGAATACCGGCCTGTCACGCCGGGGGtCGCGGGTTCGAGTCCCGTCCGCTCCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr2.trna7 (1308732-1308659)	Length: 74 bp
Type: Cys	Anticodon: GCA at 33-35 (1308700-1308698)	Score: 56.83
Seq: GGCGCGGTAGCAAAGCGGTTATGCGGCGGCCTGCAAAGCCGCTCAGGTCGGTTCGACTCCGGCTCGCGCCTCCA
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....

chr1.trna5 (581808-581881)	Length: 74 bp
Type: Cys	Anticodon: GCA at 33-35 (581840-581842)	Score: 64.85
Seq: GGCGCGATAGCAAAGCGGTTATGCAGCGGCCTGCAAAGCCGTGTAGGCCGGTTCGACTCCGGCTCGCGCCTCCA
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....

chr1.trna19 (3214598-3214674)	Length: 77 bp
Type: Gln	Anticodon: TTG at 35-37 (3214632-3214634)	Score: 75.81
Seq: AGGGGAGTCGCCAAGTTGGTtAAGGCACCGGATTTTGATTCCGGCATgCGAGGGTTCGAGTCCTTCCTCCCCTGCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr1.trna35 (1661373-1661298)	Length: 76 bp
Type: Glu	Anticodon: TTC at 35-37 (1661339-1661337)	Score: 60.10
Seq: GTCCCCTTCGTCTAGAGGCctAGGACATCACCCTTTCACGGTGAGTACAGGGGTTCGAATCCCCTAGGGGACGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....

chr1.trna16 (2251487-2251561)	Length: 75 bp
Type: Gly	Anticodon: CCC at 34-36 (2251520-2251522)	Score: 61.13
Seq: GCGGGCGTCGTATAATGGCcATTACCTCAGCTTCCCAAGCTGATGACGTGGGTTCGATTCCCATCGCCCGCTCCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....

chr1.trna3 (581483-581558)	Length: 76 bp
Type: Gly	Anticodon: GCC at 34-36 (581516-581518)	Score: 89.05
Seq: GCGGGAGTAGCTCAGTTGGTAGAGCGCAACCTTGCCAAGGTTGAGGtCGCGAGTTCGAGACTCGTCTCCCGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr1.trna4 (581618-581693)	Length: 76 bp
Type: Gly	Anticodon: GCC at 34-36 (581651-581653)	Score: 89.05
Seq: GCGGGAGTAGCTCAGTTGGTAGAGCGCAACCTTGCCAAGGTTGAGGtCGCGAGTTCGAGACTCGTCTCCCGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr1.trna23 (2752206-2752133)	Length: 74 bp
Type: Gly	Anticodon: TCC at 33-35 (2752174-2752172)	Score: 82.17
Seq: GCGGGTGTAGCTCAATGGTAGAGCAGAAGCCTTCCAAGCTTACGACGAGGGTTCGATTCCCTTCACCCGCTCCA
Str: >>>>>>>..>>>>.......<<<<..>>>>.......<<<<.....>>>>>.......<<<<<<<<<<<<....

chr1.trna7 (1289565-1289640)	Length: 76 bp
Type: His	Anticodon: GTG at 34-36 (1289598-1289600)	Score: 80.89
Seq: GTGGCTGTAGCTCAGTTGGTAGAGTCCAGGATTGTGATTCCTGTTGtCGTGGGTTCGAGTCCCATCAGCCACCCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr1.trna30 (1883609-1883533)	Length: 77 bp
Type: Ile	Anticodon: GAT at 35-37 (1883575-1883573)	Score: 93.29
Seq: GGGTCTGTAGCTCAGTCGGTtAGAGCACCGTCTTGATAAGGCGGGGGtCGTTGGTTCGAATCCAACCAGACCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr2.trna2 (556544-556620)	Length: 77 bp
Type: Ile	Anticodon: GAT at 35-37 (556578-556580)	Score: 93.29
Seq: GGGTCTGTAGCTCAGTCGGTtAGAGCACCGTCTTGATAAGGCGGGGGtCGTTGGTTCGAATCCAACCAGACCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr2.trna4 (888058-888134)	Length: 77 bp
Type: Ile	Anticodon: GAT at 35-37 (888092-888094)	Score: 93.29
Seq: GGGTCTGTAGCTCAGTCGGTtAGAGCACCGTCTTGATAAGGCGGGGGtCGTTGGTTCGAATCCAACCAGACCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr1.trna42 (684998-684914)	Length: 85 bp
Type: Leu	Anticodon: CAA at 35-37 (684964-684962)	Score: 75.09
Seq: GCCCAGGTGGTGAAATTGGTaGACGCAGGGGACTCAAAATCCCCCGCCGCAAGGCGTGCCGGTTCGATTCCGGCCCTGGGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>....<<<..>>>>>.......<<<<<<<<<<<<....

chr1.trna9 (1315394-1315480)	Length: 87 bp
Type: Leu	Anticodon: CAG at 35-37 (1315428-1315430)	Score: 69.58
Seq: GCCCAGGTGGCGAAATTGGTaGACGCACTAGGTTCAGGTCCTAGCGGTGGCAACACTgTGGAGGTTCGAGTCCTCTCTTGGGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>....<<<...>>>>>.......<<<<<<<<<<<<....

chr1.trna10 (1317229-1317315)	Length: 87 bp
Type: Leu	Anticodon: CAG at 35-37 (1317263-1317265)	Score: 76.78
Seq: GCCCAGGTGGCGGAATTGGTaGACGCACTAGGTTCAGGTCCTAGCGGTGGCAACACCGTGGAGGTTCGAGTCCTCTCCTGGGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>....<<<<..>>>>>.......<<<<<<<<<<<<....

chr1.trna29 (1920437-1920353)	Length: 85 bp
Type: Leu	Anticodon: GAG at 35-37 (1920403-1920401)	Score: 63.68
Seq: GCCGACGTGGTGAAATTGGTaGACACGCTATCTTGAGGGGGTAGTGGCGAAAGCTGTGCGAGTTCGAGTCTCGCCGTCGGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>....<<<..>>>>>.......<<<<<<<<<<<<....

chr2.trna9 (634270-634186)	Length: 85 bp
Type: Leu	Anticodon: GAG at 35-37 (634236-634234)	Score: 65.46
Seq: GCCGACGTGGTGAAATTGGTaGACACGCTATCTTGAGGGGGTAGTGGCGAAAGCCGTGCGAGTTCGAGTCTCGCCGTCGGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>....<<<..>>>>>.......<<<<<<<<<<<<....

chr1.trna37 (1534984-1534898)	Length: 87 bp
Type: Leu	Anticodon: TAG at 35-37 (1534950-1534948)	Score: 77.10
Seq: GCGTGAGTGGCGAAATTGGTaGACGCACCAGGTTTAGGTCCTGACGCCCGCAAGGGCGTGCCGGTTCGAGTCCGGCCTCACGCACCA
Str: >>>>>>>..>>>...........<<<..>>>>.......<<<<..>>>>....<<<<..>>>>>.......<<<<<<<<<<<<....

chr1.trna47 (144090-144015)	Length: 76 bp
Type: Lys	Anticodon: CTT at 34-36 (144057-144055)	Score: 94.68
Seq: GGGGCGTTAGCTCAGTTGGTAGAGCAGCGGACTCTTAATCCGTAGGtCGAGTGTTCGAGTCACTCACGCCCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr1.trna12 (2178985-2179060)	Length: 76 bp
Type: Lys	Anticodon: TTT at 34-36 (2179018-2179020)	Score: 92.38
Seq: GGGTCGTTAGCTCAGCTGGTAGAGCAGCGGACTTTTAATCCGTTGGtCACTGGTTCGAATCCAGTACGGCCTACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr1.trna32 (1808633-1808557)	Length: 77 bp
Type: Met	Anticodon: CAT at 35-37 (1808599-1808597)	Score: 86.01
Seq: CGCGGGGTGGAGCAGTCtGGCAGCTCGTCGGGCTCATAACCCGAAGGtCGTAGGTTCAAATCCTACCCCCGCAACCA
Str: .>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.....

chr1.trna8 (1300504-1300580)	Length: 77 bp
Type: Met	Anticodon: CAT at 35-37 (1300538-1300540)	Score: 86.01
Seq: CGCGGGGTGGAGCAGTCtGGCAGCTCGTCGGGCTCATAACCCGAAGGtCGTAGGTTCAAATCCTACCCCCGCAACCA
Str: .>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.....

chr2.trna1 (329291-329366)	Length: 76 bp
Type: Met	Anticodon: CAT at 34-36 (329324-329326)	Score: 86.24
Seq: GGGCCTGTAGCTCAGGGGTtAGAGCAGTCGACTCATAATCGATTGGtCGCGGGTTCGAAACCCGCCGGGCCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr1.trna46 (285516-285440)	Length: 77 bp
Type: Met	Anticodon: CAT at 35-37 (285482-285480)	Score: 88.36
Seq: GGCGAATTAGCTCAGTCGGTtAGAGCGACGGAATCATAATCCGCAGGtCCGGGGTTCGAGTCCCTGATTCGCCACCA
Str: >>>>>>>..>>>>.........<<<<..>>>>.......<<<<......>>>>>.......<<<<<<<<<<<<....

chr1.trna1 (161897-161972)	Length: 76 bp
Type: Phe	Anticodon: GAA at 34-36 (161930-161932)	Score: 87.37
Seq: GGCCCGGTAGCTCAGTTGGTAGAGCAGCGGATTGAAAATCCGCGTGtCGGTGGTTCGATTCCGCCCCAGGCCACCA
Str: >>>>.>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<.<<<<....

chr1.trna17 (2629066-2629142)	Length: 77 bp
Type: Pro	Anticodon: CGG at 35-37 (2629100-2629102)	Score: 81.43
Seq: CGGGGTGTAGCTTAGCCtGGTAGAGCGCTACGTTCGGGACGTAGAGGcCGGAGGTTCGAATCCTCTCACCCCGACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr1.trna6 (1130046-1130122)	Length: 77 bp
Type: Pro	Anticodon: GGG at 35-37 (1130080-1130082)	Score: 81.38
Seq: CGGGGCGTAGCGCAGCCtGGTAGCGTACCTGCATGGGGTGCAGGTGGtCGGAGGTTCAAATCCTCTCGCCCCGACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr1.trna41 (830691-830615)	Length: 77 bp
Type: Pro	Anticodon: TGG at 35-37 (830657-830655)	Score: 88.66
Seq: CGGAGCGTAGCGCAGCCtGGTAGCGCATCTGATTTGGGATCAGAGGGtCGTAGGTTCGAATCCTATCGCTCCGACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr1.trna28 (2204645-2204555)	Length: 91 bp
Type: Ser	Anticodon: CGA at 35-37 (2204611-2204609)	Score: 69.83
Seq: GGAAAGGTGGCAGAGAGGTcgAATGCGCCGGACTCGAAATCCGGTATACGGTTATaCCGTATCGTGGGTTCGAATCCCACCCTTTCCGCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>>.....<<<<<<.>>>>>.......<<<<<<<<<<<<....

chr1.trna33 (1724813-1724720)	Length: 94 bp
Type: Ser	Anticodon: GCT at 35-37 (1724779-1724777)	Score: 69.97
Seq: GGAGACGTGGCCGAGAGGTcgAAGGCACTCCCCTGCTAAGGGAGCATCTGGGCCAAaACCTGGAtCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>.>>.......<<.<<...>>>>>.......<<<<<<<<<<<<....

chr2.trna6 (1959399-1959310)	Length: 90 bp
Type: Ser	Anticodon: GGA at 35-37 (1959365-1959363)	Score: 75.69
Seq: GGAGAGATGGATGAGTGGTttAAGTCGCACGCCTGGAAAGCGTGTATAGGTGAAAGCCTATCGGGGGTTCGAATCCCCCTCTCTCCGCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>>....<<<<<<.>>>>>.......<<<<<<<<<<<<....

chr1.trna15 (2192475-2192562)	Length: 88 bp
Type: Ser	Anticodon: TGA at 35-37 (2192509-2192511)	Score: 78.34
Seq: GGAAGCGTGGCCGAGTGGTttAAGGCACTGGTCTTGAAAACCAGCGACGGGCAACCGTCCGTGAGTTCGAATCTCACCGCTTCCGCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>....<<<<<.>>>>>.......<<<<<<<<<<<<....

chr1.trna2 (502561-502636)	Length: 76 bp
Type: Thr	Anticodon: CGT at 34-36 (502594-502596)	Score: 88.22
Seq: GCCGGTGTAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGtCGGAAGTTCGAGTCTTCTCTCCGGCACCA
Str: >>>>>.>..>>>>........<<<<..>>>>.......<<<<......>>>>>.......<<<<<<.<<<<<....

chr1.trna24 (2752108-2752034)	Length: 75 bp
Type: Thr	Anticodon: GGT at 33-35 (2752076-2752074)	Score: 90.12
Seq: GCCCATGTGGCTCAGTGGTAGAGCACTCCCTTGGTAAGGGAGAGGtCGGCAGTTCGATCCTGCCCATGGGCACCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr1.trna21 (2790831-2790756)	Length: 76 bp
Type: Thr	Anticodon: TGT at 34-36 (2790798-2790796)	Score: 81.30
Seq: GCCGGCTTAGCTCATCTGGTAGAGCAGTTGATTTGTAATCATCAGGtGGCGGGTTCGAGTCCTGCAGCCGGCACCA
Str: >>>>>>>..>>>>........<<<<.>.>>>.......<<<.<.....>>>>>.......<<<<<<<<<<<<....

chr1.trna25 (2750721-2750646)	Length: 76 bp
Type: Trp	Anticodon: CCA at 34-36 (2750688-2750686)	Score: 83.72
Seq: AGGGGTATAGCTCAACTGGCAGAGCGTCGGTCTCCAAAACCGAAGGtTGGGGGTTCAATTCCCTCTGCCCCTGCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr1.trna22 (2752335-2752250)	Length: 86 bp
Type: Tyr	Anticodon: GTA at 35-37 (2752301-2752299)	Score: 66.50
Seq: GGAGGGGTGCCCGAGTGGCtaAAGGGGGCAGACTGTAAATCTGTTGGCTTACGCCTaCGTTGGTTCGAATCCAACCTCCTCCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>....<<<...>>>>>.......<<<<<<<<<<<<....

chr1.trna26 (2676245-2676168)	Length: 78 bp
Type: Undet	Anticodon: ??? at 0-0 (0-0)	Score: 83.88
Seq: GGGTCTGTAGCTCAGTCGGTtAGAGCACCGTCTTTgATAAGGCGGGGGtCGTTGGTTCGAATCCAACCAGACCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>........<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr1.trna11 (1847464-1847538)	Length: 75 bp
Type: Val	Anticodon: CAC at 33-35 (1847496-1847498)	Score: 91.15
Seq: GGGCGGTTAGCTCAGCGGTAGAGCACTGCCTTCACACGGCAGGGGtCACTGGTTCGATCCCAGTACCGCCCACCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr1.trna40 (1140923-1140847)	Length: 77 bp
Type: Val	Anticodon: GAC at 35-37 (1140889-1140887)	Score: 91.08
Seq: AGGCTCGTAGCTCAGTTGGTtAGAGCACCACCTTGACATGGTGGGGGtCGTTGGTTCGAATCCAATCGAGCCTACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr1.trna38 (1515831-1515756)	Length: 76 bp
Type: Val	Anticodon: TAC at 34-36 (1515798-1515796)	Score: 93.03
Seq: GGGTGCTTAGCTCAGTTGGTAGAGCGGCGCCCTTACAAGGCGTAGGtCGGGAGTTCGAGCCTCTCAGCACCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

The Genomic tRNA Database is curated by Todd Lowe and Patricia Chan. Please email lowe@soe.ucsc.edu with any questions and comments. To submit corrections, please use our Bug and Request Tracking System.