tRNAscan-SE Analysis of the Bordetella parapertussis Genome

[Main Overview] [Secondary Structures]	[Analysis Notes]
[tRNAs by Isotype] [tRNAs by Locus]	[Run Options/Stats]
[tRNA Alignments][FASTA Seqs]	[Genome DB] [Genome Seq]

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[GtRNAdb Home] [tRNAscan-SE Server] [Lowe Lab] [Other Links]

Predicted tRNA Secondary Structures

Click on "View tRNA" buttons to view 2-D tRNA structures

chr.trna44 (1520331-1520256)	Length: 76 bp
Type: Ala	Anticodon: CGC at 34-36 (1520298-1520296)	Score: 84.28
Seq: GGGGCGGTAGCTCAGCTGGGAGAGCGTCGCGTTCGCAATGCGAAGGtCGGGAGTTCGATCCTCCTCCGCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna46 (1212713-1212638)	Length: 76 bp
Type: Ala	Anticodon: GGC at 34-36 (1212680-1212678)	Score: 86.46
Seq: GGGGGTATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAGGtCAGCGGTTCGATCCCGCTTACCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna49 (1198009-1197934)	Length: 76 bp
Type: Ala	Anticodon: GGC at 34-36 (1197976-1197974)	Score: 86.46
Seq: GGGGGTATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAGGtCAGCGGTTCGATCCCGCTTACCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna20 (2583312-2583387)	Length: 76 bp
Type: Ala	Anticodon: TGC at 34-36 (2583345-2583347)	Score: 88.49
Seq: GGGGGTGTAGCTCAGCTGGGAGAGCGCCTGCTTTGCAAGCAGGATGtCATCGGTTCGATCCCGTTCACCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>.>>>.......<<<.<<<<<<<<....

chr.trna35 (4077887-4077812)	Length: 76 bp
Type: Ala	Anticodon: TGC at 34-36 (4077854-4077852)	Score: 88.49
Seq: GGGGGTGTAGCTCAGCTGGGAGAGCGCCTGCTTTGCAAGCAGGATGtCATCGGTTCGATCCCGTTCACCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>.>>>.......<<<.<<<<<<<<....

chr.trna9 (1842276-1842351)	Length: 76 bp
Type: Ala	Anticodon: TGC at 34-36 (1842309-1842311)	Score: 88.49
Seq: GGGGGTGTAGCTCAGCTGGGAGAGCGCCTGCTTTGCAAGCAGGATGtCATCGGTTCGATCCCGTTCACCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>.>>>.......<<<.<<<<<<<<....

chr.trna17 (2450739-2450815)	Length: 77 bp
Type: Arg	Anticodon: ACG at 35-37 (2450773-2450775)	Score: 86.25
Seq: GCGCCCGTAGCTCAGTTGGAtAGAGTACTTGGCTACGAACCAAGGGGtCGTGGGTTCGAATCCTGCCGGGCGCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna18 (2465930-2466006)	Length: 77 bp
Type: Arg	Anticodon: ACG at 35-37 (2465964-2465966)	Score: 86.25
Seq: GCGCCCGTAGCTCAGTTGGAtAGAGTACTTGGCTACGAACCAAGGGGtCGTGGGTTCGAATCCTGCCGGGCGCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna31 (4443761-4443687)	Length: 75 bp
Type: Arg	Anticodon: CCG at 34-36 (4443728-4443726)	Score: 66.19
Seq: GCGCCCGTAGTTCAATGGAtAGAATGAGAGTTTCCGAAGCTCTTGATACAGGTTCGATTCCTGTCGGGCGCGCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....

chr.trna45 (1293194-1293120)	Length: 75 bp
Type: Arg	Anticodon: CCT at 34-36 (1293161-1293159)	Score: 58.52
Seq: CTCGCCGTAGTTAAATGGAtATAACCGGCCCCTCCTAAGGGTCAAtTGGTGGTTCGATTCCACCCGGCGAGGCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....

chr.trna14 (2316095-2316171)	Length: 77 bp
Type: Arg	Anticodon: TCT at 35-37 (2316129-2316131)	Score: 90.16
Seq: CCGCCCTTAGCTCAGTTGGAtAGAGCACAGGTCTTCTAAACCTGGGGtCACAAGTTCGAATCTTGTAGGGCGGGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna10 (1975390-1975465)	Length: 76 bp
Type: Asn	Anticodon: GTT at 34-36 (1975423-1975425)	Score: 87.19
Seq: TCCCCGATAGCTCAGTCGGTAGAGCGACGGACTGTTAATCCGCAGGtCGCTGGTTCGAGCCCAGCTCGGGGAGCCA
Str: >>>>>>>..>>>>........<<<<..>>>>.......<<<<......>>>>>.......<<<<<<<<<<<<....

chr.trna30 (4648812-4648887)	Length: 76 bp
Type: Asn	Anticodon: GTT at 34-36 (4648845-4648847)	Score: 87.19
Seq: TCCCCGATAGCTCAGTCGGTAGAGCGACGGACTGTTAATCCGCAGGtCGCTGGTTCGAGCCCAGCTCGGGGAGCCA
Str: >>>>>>>..>>>>........<<<<..>>>>.......<<<<......>>>>>.......<<<<<<<<<<<<....

chr.trna48 (1212495-1212419)	Length: 77 bp
Type: Asp	Anticodon: GTC at 35-37 (1212461-1212459)	Score: 95.07
Seq: GGAGCGGTAGTTCAGTTGGTtAGAATACCGGCCTGTCACGCCGGGGGtCGCGGGTTCGAGCCCCGTCCGCTCCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna51 (1197791-1197715)	Length: 77 bp
Type: Asp	Anticodon: GTC at 35-37 (1197757-1197755)	Score: 95.07
Seq: GGAGCGGTAGTTCAGTTGGTtAGAATACCGGCCTGTCACGCCGGGGGtCGCGGGTTCGAGCCCCGTCCGCTCCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna28 (3819361-3819434)	Length: 74 bp
Type: Cys	Anticodon: GCA at 33-35 (3819393-3819395)	Score: 68.57
Seq: GGCGCAATGGCAGAGTGGTTATGCAGCGGATTGCAAATCCGTGTACGTCGGTTCGATTCCGGCTTGCGCCTCCA
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....

chr.trna7 (878842-878918)	Length: 77 bp
Type: Gln	Anticodon: TTG at 35-37 (878876-878878)	Score: 77.70
Seq: TGGGGAGTCGCCAAGCTGGTtAAGGCACCGGATTTTGATTCCGGCATgCGAAGGTTCGAATCCTTCCTCCCCAGCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna47 (1212606-1212531)	Length: 76 bp
Type: Glu	Anticodon: TTC at 35-37 (1212572-1212570)	Score: 60.10
Seq: GTCCCCTTCGTCTAGAGGCctAGGACATCACCCTTTCACGGTGAGTACAGGGGTTCGAATCCCCTAGGGGACGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....

chr.trna50 (1197902-1197827)	Length: 76 bp
Type: Glu	Anticodon: TTC at 35-37 (1197868-1197866)	Score: 60.10
Seq: GTCCCCTTCGTCTAGAGGCctAGGACATCACCCTTTCACGGTGAGTACAGGGGTTCGAATCCCCTAGGGGACGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....

chr.trna6 (542793-542866)	Length: 74 bp
Type: Gly	Anticodon: CCC at 33-35 (542825-542827)	Score: 77.64
Seq: GCGGGTGTAGTTCAATGGTAGAACGGCGGCTTCCCAAGCCTCAAGCGTGGGTTCGATTCCCATCACCCGCTCCA
Str: >>>>>>>..>>>>.......<<<<.>.>>>.......<<<.<....>>>>>.......<<<<<<<<<<<<....

chr.trna26 (3781521-3781596)	Length: 76 bp
Type: Gly	Anticodon: GCC at 34-36 (3781554-3781556)	Score: 88.26
Seq: GCGGGAATAGCTCAGTTGGTAGAGCGCAACCTTGCCAAGGTTGAGGtCGCGAGTTCGAGACTCGTTTCCCGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna27 (3819225-3819300)	Length: 76 bp
Type: Gly	Anticodon: GCC at 34-36 (3819258-3819260)	Score: 88.26
Seq: GCGGGAATAGCTCAGTTGGTAGAGCGCAACCTTGCCAAGGTTGAGGtCGCGAGTTCGAGACTCGTTTCCCGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna2 (6556-6629)	Length: 74 bp
Type: Gly	Anticodon: TCC at 33-35 (6588-6590)	Score: 82.17
Seq: GCGGGTGTAGCTCAATGGTAGAGCAGAAGCCTTCCAAGCTTACGACGAGGGTTCGATTCCCTTCACCCGCTCCA
Str: >>>>>>>..>>>>.......<<<<..>>>>.......<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna15 (2396937-2397012)	Length: 76 bp
Type: His	Anticodon: GTG at 34-36 (2396970-2396972)	Score: 82.63
Seq: GTGGCTGTAGCTCAGTTGGTAGAGTCCCGGATTGTGATTCCGGTTGtCGTGGGTTCGAGTCCCATCAGCCACCCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna19 (2583215-2583291)	Length: 77 bp
Type: Ile	Anticodon: GAT at 35-37 (2583249-2583251)	Score: 93.29
Seq: GGGTCTGTAGCTCAGTCGGTtAGAGCACCGTCTTGATAAGGCGGGGGtCGTTGGTTCGAATCCAACCAGACCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna34 (4077984-4077908)	Length: 77 bp
Type: Ile	Anticodon: GAT at 35-37 (4077950-4077948)	Score: 93.29
Seq: GGGTCTGTAGCTCAGTCGGTtAGAGCACCGTCTTGATAAGGCGGGGGtCGTTGGTTCGAATCCAACCAGACCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna8 (1842179-1842255)	Length: 77 bp
Type: Ile	Anticodon: GAT at 35-37 (1842213-1842215)	Score: 93.29
Seq: GGGTCTGTAGCTCAGTCGGTtAGAGCACCGTCTTGATAAGGCGGGGGtCGTTGGTTCGAATCCAACCAGACCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna52 (529472-529388)	Length: 85 bp
Type: Leu	Anticodon: CAA at 35-37 (529438-529436)	Score: 75.82
Seq: GCCCGGGTGGTGAAATTGGTaGACGCAGGGGACTCAAAATCCCCCGCCGCAAGGCGTGCCGGTTCGATTCCGGCCCCGGGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>....<<<..>>>>>.......<<<<<<<<<<<<....

chr.trna40 (2722254-2722170)	Length: 85 bp
Type: Leu	Anticodon: CAG at 35-37 (2722220-2722218)	Score: 75.85
Seq: GCCCAGGTGGCGGAATTGGTaGACGCGCATGGTTCAGGTCCATGTGCCGCAAGGTGTGGAGGTTCGAGTCCTCTCCTGGGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>....<<<..>>>>>.......<<<<<<<<<<<<....

chr.trna41 (2721309-2721225)	Length: 85 bp
Type: Leu	Anticodon: CAG at 35-37 (2721275-2721273)	Score: 75.85
Seq: GCCCAGGTGGCGGAATTGGTaGACGCGCATGGTTCAGGTCCATGTGCCGCAAGGTGTGGAGGTTCGAGTCCTCTCCTGGGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>....<<<..>>>>>.......<<<<<<<<<<<<....

chr.trna38 (3699358-3699274)	Length: 85 bp
Type: Leu	Anticodon: GAG at 35-37 (3699324-3699322)	Score: 63.68
Seq: GCCGACGTGGTGAAATTGGTaGACACGCTATCTTGAGGGGGTAGTGGCGAAAGCTGTGCGAGTTCGAGTCTCGCCGTCGGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>....<<<..>>>>>.......<<<<<<<<<<<<....

chr.trna24 (3702329-3702413)	Length: 85 bp
Type: Leu	Anticodon: TAA at 35-37 (3702363-3702365)	Score: 79.53
Seq: GCACCCATGGCGAAATTGGTaGACGCAAGGGACTTAAAATCCCTCGCCGCAAGGCGTCCCGGTTCGATTCCGGGTGGGTGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>....<<<..>>>>>.......<<<<<<<<<<<<....

chr.trna12 (2137768-2137854)	Length: 87 bp
Type: Leu	Anticodon: TAG at 35-37 (2137802-2137804)	Score: 68.96
Seq: GCGAAGGTGGCGAAATTGGTaGACGCACCAGGTTTAGGTCCTGACGCCGTAACAGGTGTGCGGGTTCGAGTCCCGCCCTTCGCACCA
Str: >>>>>>>..>>>...........<<<..>>>>.......<<<<..>>>......<<<..>>>>>.......<<<<<<<<<<<<....

chr.trna37 (4003691-4003616)	Length: 76 bp
Type: Lys	Anticodon: CTT at 34-36 (4003658-4003656)	Score: 88.69
Seq: GGGCTGTTAGCTCAGTTGGTAGAGCAGCGGACTCTTAATCCGTAGGtCGAGTGTTCGAGCCACTCACAGCCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna36 (4022883-4022808)	Length: 76 bp
Type: Lys	Anticodon: TTT at 34-36 (4022850-4022848)	Score: 94.70
Seq: GGGTCGTTAGCTCAGTTGGTAGAGCAGCGGACTTTTAATCCGTTGGtCGCGCGTTCGAGTCGCGCACGACCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna39 (3038161-3038083)	Length: 79 bp
Type: Met	Anticodon: CAT at 37-39 (3038125-3038123)	Score: 66.21
Seq: GGGCCTCTAGCTCAtGCCtGGTtAGAGCAGCGGACTCATAATCCGTTGGtGCCGAGTTCGACTCTCGGGGGGCCTACCA
Str: >>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna42 (2711741-2711665)	Length: 77 bp
Type: Met	Anticodon: CAT at 35-37 (2711707-2711705)	Score: 74.05
Seq: GGCGCATTAGCTCAGCCGGTtAGAGCGACGGAATCATAATCCGCAGGtCCCCTGTTCGAATCAGGGATGCGCCACTA
Str: >>>>>>>..>>>>.........<<<<..>>>>.......<<<<......>>>>>.......<<<<<<<<<<<<....

chr.trna23 (2811859-2811935)	Length: 77 bp
Type: Met	Anticodon: CAT at 35-37 (2811893-2811895)	Score: 85.01
Seq: CGCGGGGTGGAGCAGTCtGGCAGCTCGTCGGGCTCATAACCCGAAGGtCGTAGGTTCAAATCCTGCCCCCGCAACCA
Str: .>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.....

chr.trna53 (400452-400377)	Length: 76 bp
Type: Phe	Anticodon: GAA at 34-36 (400419-400417)	Score: 86.41
Seq: GGCCTGGTAGCTCAGTCGGTAGAGCAGAGGATTGAAAATCCTTGTGtCGGTGGTTCGATTCCGCCCCAGGCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna5 (325800-325876)	Length: 77 bp
Type: Pro	Anticodon: CGG at 35-37 (325834-325836)	Score: 84.17
Seq: CGGGGCGTAGCTCAGCCtGGTAGAGTACTGCGTTCGGGACGCAGGAGtCGGAGGTTCGAATCCTCTCGCCCCGACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna22 (2803874-2803950)	Length: 77 bp
Type: Pro	Anticodon: GGG at 35-37 (2803908-2803910)	Score: 77.19
Seq: CGGGGCGTAGCGCAGCCtGGTAGCGCACTTGCATGGGGTGCAAGGGGtCGCGAGTTCGAATCCCGCCGTCCCGACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>.>.......<.<<<<<<<<<<....

chr.trna13 (2225163-2225239)	Length: 77 bp
Type: Pro	Anticodon: TGG at 35-37 (2225197-2225199)	Score: 87.76
Seq: CGGGGCGTAGCGCAGCCtGGTAGCGCATCTGCTTTGGGAGCAGAGGGtCGCGAGTTCGAATCCCGCCGCCCCGACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>.>.......<.<<<<<<<<<<....

chr.trna25 (3719822-3719911)	Length: 90 bp
Type: Ser	Anticodon: CGA at 35-37 (3719856-3719858)	Score: 77.54
Seq: GGAGAGGTGGCAGAGTGGTcgAATGCGCCGGACTCGAAATCCGGTATACGTTTAGGCGTATCGTGGGTTCGAATCCCACCCTCTCCGCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>>....<<<<<<.>>>>>.......<<<<<<<<<<<<....

chr.trna16 (2435920-2436012)	Length: 93 bp
Type: Ser	Anticodon: GCT at 35-37 (2435954-2435956)	Score: 69.50
Seq: GGAGATGTGCCCGAGAGGCtgAAGGGGCTCCCCTGCTAAGGGAGTATGTGGCTAAAaACTGCATCGTGGGTTCGAATCCCACCATCTCCGCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>>.......<<<<<<.>>>>>.......<<<<<<<<<<<<....

chr.trna32 (4180246-4180156)	Length: 91 bp
Type: Ser	Anticodon: GGA at 35-37 (4180212-4180210)	Score: 75.09
Seq: GGACAGGTGGCCGAGTGGTtgAAGGCGCACGCCTGGAAAGCGTGTATACGTGATAaGCGTATCGGGGGTTCGAATCCCCCTCTGTCCGCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>>.....<<<<<<.>>>>>.......<<<<<<<<<<<<....

chr.trna43 (1975218-1975143)	Length: 76 bp
Type: Thr	Anticodon: CGT at 34-36 (1975185-1975183)	Score: 90.68
Seq: GCCGGCATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGtCGGGGGTTCGACTCCTCTTGCCGGCACCA
Str: >>>>>>>..>>>>........<<<<..>>>>.......<<<<......>>>>>.......<<<<<<<<<<<<....

chr.trna3 (6636-6710)	Length: 75 bp
Type: Thr	Anticodon: GGT at 33-35 (6668-6670)	Score: 86.85
Seq: GCCCATGTGGCTCAGTGGTAGAGCACTCCCTTGGTAAGGGAGAGGtCACGCGTTCGATCCGCGTCATGGGCACCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna29 (4622238-4622313)	Length: 76 bp
Type: Thr	Anticodon: TGT at 34-36 (4622271-4622273)	Score: 95.16
Seq: GCCGGTGTAGCTCAGTTGGTAGAGCAGCTCACTTGTAATGAGAAGGtCGAGGGTTCGATTCCTTTCACCGGCACCA
Str: >>>>>>>..>>>>........<<<<..>>>>.......<<<<......>>>>>.......<<<<<<<<<<<<....

chr.trna4 (8068-8143)	Length: 76 bp
Type: Trp	Anticodon: CCA at 34-36 (8101-8103)	Score: 85.26
Seq: AGGGGTATAGCTCAATTGGCAGAGCGTCGGTCTCCAAAACCGAAGGtTGTAGGTTCGATTCCTACTGCCCCTGCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna1 (6281-6367)	Length: 87 bp
Type: Tyr	Anticodon: GTA at 35-37 (6315-6317)	Score: 72.20
Seq: GGAGGAGTGCCCGAGTGGTtaAAGGGGGCAGACTGTAAATCTGTTGGCCTTGCGCCTACGTTGGTTCGAATCCAACCTCCTCCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>.>.><.<.<<..>>>>>.......<<<<<<<<<<<<....

chr.trna33 (4147672-4147598)	Length: 75 bp
Type: Val	Anticodon: CAC at 33-35 (4147640-4147638)	Score: 85.38
Seq: GGGTGGTTAGCTCAGTGGTAGAGCACTGCCTTCACACGGCAGGGGtCACAAGTTCGAAACTTGTACCACCCACCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna11 (2090948-2091024)	Length: 77 bp
Type: Val	Anticodon: GAC at 35-37 (2090982-2090984)	Score: 88.50
Seq: AGGCGGTTAGCTCAGTTGGTtAGAGCGCTACGTTGACATCGTAGAGGtCGTTGGTTCGAACCCAATACCGCCTACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna21 (2728633-2728708)	Length: 76 bp
Type: Val	Anticodon: TAC at 34-36 (2728666-2728668)	Score: 92.08
Seq: GGGTGCTTAGCTCAGCTGGTAGAGCGGCGCCCTTACAAGGCGTAGGtCACAGGTTCGACCCCTGTAGCACCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

The Genomic tRNA Database is curated by Todd Lowe and Patricia Chan. Please email lowe@soe.ucsc.edu with any questions and comments. To submit corrections, please use our Bug and Request Tracking System.