tRNAscan-SE Analysis of the Bifidobacterium longum Genome

[Main Overview] [Secondary Structures]	[Analysis Notes]
[tRNAs by Isotype] [tRNAs by Locus]	[Run Options/Stats]
[tRNA Alignments][FASTA Seqs]	[Genome DB] [Genome Seq]

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[GtRNAdb Home] [tRNAscan-SE Server] [Lowe Lab] [Other Links]

Predicted tRNA Secondary Structures

Click on "View tRNA" buttons to view 2-D tRNA structures

chr.trna23 (1769952-1770027)	Length: 76 bp
Type: Ala	Anticodon: CGC at 34-36 (1769985-1769987)	Score: 78.13
Seq: GGGGCTGTAGCTCAGTTGGTAGAGCGCTTCGTTCGCATCGAAGAGGtCGCGGTTTCGACTACCGTCAGCTCCACGA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna10 (778709-778784)	Length: 76 bp
Type: Ala	Anticodon: GGC at 34-36 (778742-778744)	Score: 83.42
Seq: GGGGCTATAGCGCAGCTGGTAGCGCATCTCCATGGCATGGAGAGGGtCGGGGGTTCGAATCCCCCTAGCTCCACGA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna11 (778871-778946)	Length: 76 bp
Type: Ala	Anticodon: GGC at 34-36 (778904-778906)	Score: 83.42
Seq: GGGGCTATAGCGCAGCTGGTAGCGCATCTCCATGGCATGGAGAGGGtCGGGGGTTCGAATCCCCCTAGCTCCACAA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna22 (1606279-1606351)	Length: 73 bp
Type: Ala	Anticodon: TGC at 34-36 (1606312-1606314)	Score: 89.29
Seq: GGGGCTATAGCGCAGCTGGTAGCGCATCTGCTTTGCAAGCAGAGGGtCGCCGGTTCGAACCCGGCTAGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr.trna52 (747472-747399)	Length: 74 bp
Type: Arg	Anticodon: ACG at 35-37 (747438-747436)	Score: 73.57
Seq: GCGCCAGTAGCCCAGCGGAttAGAGCAGCTGACTACGGATCAGCAGGtCGCAGGTTCGAATCCTGTCTGGCGCA
Str: >>>>>>>..>>.>.........<.<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr.trna53 (747369-747296)	Length: 74 bp
Type: Arg	Anticodon: ACG at 35-37 (747335-747333)	Score: 73.57
Seq: GCGCCAGTAGCCCAGCGGAttAGAGCAGCTGACTACGGATCAGCAGGtCGCAGGTTCGAATCCTGTCTGGCGCA
Str: >>>>>>>..>>.>.........<.<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr.trna45 (1280666-1280591)	Length: 76 bp
Type: Arg	Anticodon: CCG at 34-36 (1280633-1280631)	Score: 82.97
Seq: GGGTTTGTAGCTCAGTGGAtAGAGCGTCTGTCTCCGGAACAGAAGGtCGTGGGTTCGATCCCCATCAAGCCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna36 (2171440-2171512)	Length: 73 bp
Type: Arg	Anticodon: CCT at 34-36 (2171473-2171475)	Score: 83.05
Seq: GCCCGAGTAGCTCAGTGGAtAGAGCACCGCTCTCCTAAAGCGGGTGtCGTCGGTTCGAATCCGATCTCGGGCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr.trna49 (981253-981177)	Length: 77 bp
Type: Arg	Anticodon: TCT at 35-37 (981219-981217)	Score: 76.80
Seq: GGCCCCGTAGCTCAGCTGGAtAGAGCATGTGACTTCTAATCTCAAGGtCGACGGTTCGAGCCCGTCCGGGGTCACGA
Str: >>>>>>>..>>>>.........<<<<.>>.>>.......<<.<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna55 (383040-382968)	Length: 73 bp
Type: Asn	Anticodon: GTT at 34-36 (383007-383005)	Score: 81.02
Seq: TCCTGCGTAGCTCAGTTGGCAGAGCATCCGACTGTTAATCGGACGGtCACTGGTTCAAGCCCAGTCGCAGGAG
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr.trna54 (440150-440078)	Length: 73 bp
Type: Asn	Anticodon: GTT at 34-36 (440117-440115)	Score: 81.86
Seq: TCCTGCGTAGCTCAGTTGGCAGAGCATCCGACTGTTAATCGGACGGtCGCTGGTTCAAGCCCAGCCGCAGGAG
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr.trna56 (382924-382849)	Length: 76 bp
Type: Asn	Anticodon: GTT at 34-36 (382891-382889)	Score: 89.32
Seq: TCCTGCGTAGCTCAGTTGGCAGAGCATCCGACTGTTAATCGGACGGtCACTGGTTCAAGCCCAGTCGCAGGAGCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna32 (2087969-2088042)	Length: 74 bp
Type: Asp	Anticodon: GTC at 35-37 (2088003-2088005)	Score: 81.74
Seq: GGCCCCGTAGCTCAGTTGGTtAGAGCGCCGCCCTGTCACGGCGGAGGtCACCGGTTCAAGTCCGGCCGGGGTCG
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<......>>>>.......<<<<.<<<<<<<.

chr.trna34 (2110850-2110926)	Length: 77 bp
Type: Asp	Anticodon: GTC at 35-37 (2110884-2110886)	Score: 90.04
Seq: GGCCCCGTAGCTCAGTTGGTtAGAGCGCCGCCCTGTCACGGCGGAGGtCACCGGTTCAAGTCCGGCCGGGGTCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<......>>>>.......<<<<.<<<<<<<....

chr.trna3 (503649-503719)	Length: 71 bp
Type: Cys	Anticodon: GCA at 33-35 (503681-503683)	Score: 54.73
Seq: GGTGGGTTAGCCAAGCGGTTAGGCAGCGGCCTGCAAAGCCGTATAGACGAGTTCGACTCTCGTACCCACCT
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.

chr.trna42 (1424867-1424793)	Length: 75 bp
Type: Gln	Anticodon: CTG at 34-36 (1424834-1424832)	Score: 64.01
Seq: TGGGGTGTGGTGTAATTGGCAACACAGCTGATTCTGGTTCAGCCAtTCTTGGTTCGAGTCCAGGCACCCCAGCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....

chr.trna9 (775646-775716)	Length: 71 bp
Type: Gln	Anticodon: TTG at 33-35 (775678-775680)	Score: 50.35
Seq: TCCCCCATGGTGTAATGGCAGCACACGGGTCTTTGGAACCCTTTGTCTTGGTTCGAGTCCAGGTGGGGGAA
Str: >>>>>>>..>>>>.......<<<<..>>>>.......<<<<.....>>>>>.......<<<<<<<<<<<<.

chr.trna41 (1424979-1424904)	Length: 76 bp
Type: Glu	Anticodon: CTC at 35-37 (1424945-1424943)	Score: 48.46
Seq: GCCCCCATCGTCTAGCGGTctAGGACTACGCCCTCTCACGGCGCCAACACCGGTTCAAATCCGGTTGGGGGTACGA
Str: >>>>>>>..>>>>.........<<<<..>>>>.......<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna37 (2085473-2085402)	Length: 72 bp
Type: Glu	Anticodon: TTC at 34-36 (2085440-2085438)	Score: 53.59
Seq: GCCCCCATCGTCTAACGGTtAGGACACCAGACTTTCAATCTGACAACGAGAGTTCGACTCTCTCTGGGGGTA
Str: >>>>>>>..>>>>........<<<<..>>>>.......<<<<.....>>>>>.......<<<<<<<<<<<<.

chr.trna40 (1524215-1524142)	Length: 74 bp
Type: Gly	Anticodon: CCC at 33-35 (1524183-1524181)	Score: 63.99
Seq: GCGGACATAGTTCATCGGTAGAATGAAAGCTTCCCAAGCTTTAGAGGCGGGTTCGACTCCCGTTGTCCGCTCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....

chr.trna46 (1264704-1264632)	Length: 73 bp
Type: Gly	Anticodon: GCC at 34-36 (1264671-1264669)	Score: 76.07
Seq: GCGGACATAGCTTAGTTGGTAAAGCGCAACCTTGCCAAGGTTGAGAcCGCGGGTTCGAGTCCCGTTGTCCGCT
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr.trna2 (503549-503624)	Length: 76 bp
Type: Gly	Anticodon: GCC at 34-36 (503582-503584)	Score: 76.69
Seq: GCGGACATAGCTTAGTTGGTAAAGCGCAACCTTGCCAAGGTTGAGAcCGCGGGTTCGAGTCCCGTTGTCCGCTCTA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna6 (503985-504060)	Length: 76 bp
Type: Gly	Anticodon: GCC at 34-36 (504018-504020)	Score: 84.37
Seq: GCGGACATAGCTTAGTTGGTAAAGCGCAACCTTGCCAAGGTTGAGAcCGCGGGTTCGAGTCCCGTTGTCCGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna25 (1936132-1936205)	Length: 74 bp
Type: Gly	Anticodon: TCC at 33-35 (1936164-1936166)	Score: 79.76
Seq: GCGGATGTAGCTCAATGGTAGAGCCTCAGTCTTCCAAACTGATTACGCGGGTTCGATTCCCGTCATCCGCTCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....

chr.trna13 (937056-937131)	Length: 76 bp
Type: His	Anticodon: GTG at 34-36 (937089-937091)	Score: 82.14
Seq: GTGGCCATAGCTCAGTTGGTAGAGCATCTGATTGTGGTTCAGAAGGtCGCGCGTTCGAGCCGCGTTGGCCACCCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna21 (1606163-1606236)	Length: 74 bp
Type: Ile	Anticodon: GAT at 35-37 (1606197-1606199)	Score: 93.28
Seq: GGGCCCGTAGCTCAGCTGGTtAGAGCGCATCCCTGATAAGGATGAGGtCGGAGGTTCAAGTCCTCCCGGGCCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr.trna51 (804463-804390)	Length: 74 bp
Type: Leu	Anticodon: CAA at 35-37 (804429-804427)	Score: 48.19
Seq: GCCCTCGTATCCCAATTGGTaGAGGAAGCAGCCTCAAAATCTGCGCAgTGTGGGTTCGAGTCCCACCGAGGGCA
Str: >>>>>>>..>>>...........<<<.>>>>.........<<<<.....>>>>>.......<<<<<<<<<<<<.

chr.trna20 (1534802-1534887)	Length: 86 bp
Type: Leu	Anticodon: CAG at 34-36 (1534835-1534837)	Score: 58.67
Seq: GCGAGTGTGGCGGAATGGTaGACGCGCTGTCTTCAGGTGGCAGTGAGTGTATGCTCGTGGGGGTTCAACTCCCCCCACTCGCACCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>....<<<<..>>>>>.......<<<<<<<<<<<<....

chr.trna8 (648764-648851)	Length: 88 bp
Type: Leu	Anticodon: GAG at 34-36 (648797-648799)	Score: 57.72
Seq: GCCCGGGTGGCGGAATGGTaGACGCGCTAGCTTGAGGTGCTAGTGCCTATTTTATACAGGCGTACGGGTTCAAGTCCCGTCTCGGGCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>.>.....<.<<<<..>>>>>.......<<<<<<<<<<<<.

chr.trna50 (841136-841055)	Length: 82 bp
Type: Leu	Anticodon: TAA at 34-36 (841103-841101)	Score: 60.16
Seq: GCCTCCGTGGCGAAATGGTaTACGCAGTCGACTTAAAATCGATCGCTTCGGCTTGTGGGTTCGAGTCCCACCGGAGGCACCT
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>..<<<..>>>>>.......<<<<<<<<<<<<....

chr.trna15 (1202593-1202676)	Length: 84 bp
Type: Leu	Anticodon: TAG at 35-37 (1202627-1202629)	Score: 67.07
Seq: GCGCGAGTGGCGGAATTGGTaGACGCGCAGGATTTAGGTTCCTGTGTCTTTGACGTGTGGGTTCAAGTCCCATCTCGCGCACCG
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>...<<<..>>>>>.......<<<<<<<<<<<<....

chr.trna44 (1350074-1350001)	Length: 74 bp
Type: Lys	Anticodon: CTT at 35-37 (1350040-1350038)	Score: 87.20
Seq: GCCCCTGTAGCTCAGTTGGTtAGAGCAGCTGACTCTTAATCAGCGTGtCCAGGGTTCGAATCCCTGCGGGGGCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr.trna43 (1388950-1388875)	Length: 76 bp
Type: Lys	Anticodon: TTT at 34-36 (1388917-1388915)	Score: 77.70
Seq: GCCCCTTTAGCTCAACGGTtAGAGCAGCGTCCTTTTAAGTCGTGGGtTGTGGGTTCGAATCCCACAGGGGGCACAA
Str: >>>>>>>..>>>>........<<<<.>>>.>.......<.<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna28 (1971555-1971631)	Length: 77 bp
Type: Met	Anticodon: CAT at 35-37 (1971589-1971591)	Score: 79.34
Seq: GGCGGGGTAGCTCAGCTGGCtAGAGCGTACGACTCATAATCGTAAGGtCAAGAGTTCGAGCCTCTTCCTCGCTACAA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna35 (2130626-2130699)	Length: 74 bp
Type: Met	Anticodon: CAT at 35-37 (2130660-2130662)	Score: 81.10
Seq: GGGGCCGTAGCTCAGTCGGTtAGAGCATGCGACTCATAATCGCCCGGtCCAGGGTTCAAGCCCCTGCGGCCCCA
Str: >>>>>>>..>>>>.........<<<<..>>>>.......<<<<......>>>>>.......<<<<<<<<<<<<.

chr.trna17 (1295466-1295542)	Length: 77 bp
Type: Met	Anticodon: CAT at 35-37 (1295500-1295502)	Score: 83.43
Seq: CGCGGGGTGGAGCAGCTcGGTAGCTCGCTGGGCTCATAACCCAGAGGtCCATGGTTCAAATCCATGCCCCGCTACCA
Str: .>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.....

chr.trna33 (2088090-2088165)	Length: 76 bp
Type: Phe	Anticodon: GAA at 34-36 (2088123-2088125)	Score: 75.92
Seq: GGCTCTGTAGCTCAGTTGGTAGAGCGAGCGACTGAAAATCGCTAGGtCAACGGATCGACGCCGTTCGGAGCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna38 (2068713-2068637)	Length: 77 bp
Type: Pro	Anticodon: CGG at 35-37 (2068679-2068677)	Score: 80.22
Seq: CGGGCTGTAGCGCAGCTtGGTAGCGCGCTTCGTTCGGGACGAAGAGGcCGCGGGTTCAAATCCCGCCAGCCCGACAA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna7 (521008-521084)	Length: 77 bp
Type: Pro	Anticodon: GGG at 35-37 (521042-521044)	Score: 83.07
Seq: CGGGCCGTAGCGCAGTTtGGTAGCGCACTTGACTGGGGGTCAAGGGGtCGCGGGTTCAAATCCCGCCGGCCCGACCG
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna12 (793729-793805)	Length: 77 bp
Type: Pro	Anticodon: TGG at 35-37 (793763-793765)	Score: 84.46
Seq: CGGGCTATAGCGCAGTTtGGTAGCGCGCCTGCTTTGGGAGCAGGATGtCGTGGGTTCAAATCCCGCTAGCCCGACAA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna19 (1414391-1414464)	Length: 74 bp
Type: Thr	Anticodon: GGT at 33-35 (1414423-1414425)	Score: 36.78
Seq: GCCCCGATAGCTCAGTGGTAGAGCACTTCCTTGGTAAGGAAGAGGtCGTGAGTCCAATTCTGAACTGCGCCCCG
Str: >>.>.>...>>>>.......<<<<.>>>>>.......<<<<<......>.>>.......<<.<.<.<.<<....

chr.trna30 (2016025-2016112)	Length: 88 bp
Type: Ser	Anticodon: CGA at 35-37 (2016059-2016061)	Score: 60.61
Seq: GGATAAGTGTCCGAGCGGTctAAGGAGCACGCCTCGAAAGCGTGTGAGGTGAAAGCCTCCGCGAGTTCGAATCTCGCCTTATCCGCCT
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>>....<<<<..>>>>>.......<<<<<<<<<<<<....

chr.trna29 (1979312-1979401)	Length: 90 bp
Type: Ser	Anticodon: GCT at 35-37 (1979346-1979348)	Score: 55.64
Seq: GGAGTCATGCCTGAGTGGCcgATAGGGGCACCCTGCTAAGGTGTTAGTCGTGTAAACGGCTCGAGGGTTCGAATCCCTCTGACTCCGCCG
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.>>>>>>....<<<<<<.>>>>>.......<<<<<<<<<<<<....

chr.trna18 (1410594-1410681)	Length: 88 bp
Type: Ser	Anticodon: GGA at 35-37 (1410628-1410630)	Score: 60.01
Seq: GGAGGATTCGCCTAGTGGTctATGGCGCACGCTTGGAAAGCGTGTTGGTGTAAcAGCCtCACGAGTTCGAATCTCGTATCCTCCGCCC
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>.>.....<.<...>>>>>.......<<<<<<<<<<<<....

chr.trna31 (2047072-2047159)	Length: 88 bp
Type: Ser	Anticodon: TGA at 35-37 (2047106-2047108)	Score: 63.66
Seq: GGACAGGTGTCTGAGCGGCctAAAGAGACGGTCTTGAAAACCGTTGAGGGGCAACCCTCCGCGAGTTCGAATCTCGCCCTGTCCGCGA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>>....<<<<..>>>>>.......<<<<<<<<<<<<....

chr.trna16 (1208139-1208211)	Length: 73 bp
Type: Thr	Anticodon: CGT at 33-35 (1208171-1208173)	Score: 53.41
Seq: GCCACCTTAGCTCAGTGGTAGAGCATCCCCCTCGTTCGtGGGAAGGtCGGTAGTTCGATTCTATCGGGTGGCT
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<.<<<<.....>>>>>.......<<<<<<<<<<<<.

chr.trna14 (1202433-1202505)	Length: 73 bp
Type: Thr	Anticodon: CGT at 34-36 (1202466-1202468)	Score: 79.68
Seq: GCCACTTTAGCTCAGTCGGTAGAGCGGCTCACTCGTAATGAGCAGGtCGTCAGTTCGATTCTGACAAGTGGCT
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr.trna27 (1971479-1971550)	Length: 72 bp
Type: Thr	Anticodon: GGT at 33-35 (1971511-1971513)	Score: 74.46
Seq: GCCCCGATAGCTCAGTGGTAGAGCACTTCCTTGGTAAGGAAGAGGtCGTGAGTCCAATTCTCACTCGGGGCT
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr.trna39 (1646911-1646835)	Length: 77 bp
Type: Thr	Anticodon: TGT at 35-37 (1646877-1646875)	Score: 77.74
Seq: GCCTCTTTAGCTCAGATGGCcAGAGCGGCCGCCTTGTAAGCGGCAGGtCGTCGGTTCGATCCCGACAAGAGGCTCGA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna57 (207457-207382)	Length: 76 bp
Type: Trp	Anticodon: CCA at 34-36 (207424-207422)	Score: 54.64
Seq: ATGCGCGTAGCTCAGCTGGTAGAGCGGCGGTCTCCAAAACCGCAGGtCGTCGGATCGAAGCCAACCGCGCAATCCC
Str: .>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>.>>.......<<.<<<<<<<<.....

chr.trna24 (1905665-1905740)	Length: 76 bp
Type: Trp	Anticodon: CCA at 34-36 (1905698-1905700)	Score: 87.91
Seq: AGGGAAGTGGCGCAATTGGTAGCGCAACGGTCTCCAAAACCGTAGGtTGTGGGTTCGAGTCCCGCCTTCCCTGCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna26 (1971396-1971477)	Length: 82 bp
Type: Tyr	Anticodon: GTA at 35-37 (1971430-1971432)	Score: 59.16
Seq: GGCGGATTTCCCAAGCGGTcaAAGGGAGCTGACTGTAAATCAGCCGCTTCGTGCTtCAGTGGTTCGAATCCACTATCCGCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<...>.><.<....>>>>>.......<<<<<<<<<<<<.

chr.trna5 (503881-503953)	Length: 73 bp
Type: Val	Anticodon: CAC at 34-36 (503914-503916)	Score: 80.71
Seq: GGGCGATTGGCGCAGCGGCtAGCGCACTTCGTTCACACCGAAGGGGtCGTAGGTTCGATTCCTACATCGCCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr.trna48 (1264465-1264390)	Length: 76 bp
Type: Val	Anticodon: CAC at 34-36 (1264432-1264430)	Score: 81.33
Seq: GGGCGATTGGCGCAGCGGCtAGCGCACTTCGTTCACACCGAAGGGGtCGTAGGTTCGATTCCTACATCGCCCACCC
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna47 (1264585-1264514)	Length: 72 bp
Type: Val	Anticodon: GAC at 33-35 (1264553-1264551)	Score: 78.26
Seq: GGGCGGTTGGCGCAGTGGTAGCGCACTTCCCTGACACGGAAGGGGtCACAAGTTCGAATCTTGTATCGCCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

chr.trna4 (503761-503835)	Length: 75 bp
Type: Val	Anticodon: GAC at 33-35 (503793-503795)	Score: 78.88
Seq: GGGCGGTTGGCGCAGTGGTAGCGCACTTCCCTGACACGGAAGGGGtCACAAGTTCGAATCTTGTATCGCCCACGA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

chr.trna1 (115187-115260)	Length: 74 bp
Type: Val	Anticodon: TAC at 35-37 (115221-115223)	Score: 88.93
Seq: GGGCAATTAGCTCAGTTGGTtAGAGCGCCACCTTTACACGGTGGATGtCGGGGGTTCGAGTCCCTCATTGCCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.

The Genomic tRNA Database is curated by Todd Lowe and Patricia Chan. Please email lowe@soe.ucsc.edu with any questions and comments. To submit corrections, please use our Bug and Request Tracking System.