tRNAscan-SE Analysis of the Bacillus halodurans Genome
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| Predicted tRNA Secondary Structures |
Click on "View tRNA" buttons to view 2-D tRNA structures
Cove-predicted tRNA secondary structures rendered by
NAVIEW (c) 1988 Robert E. Bruccoleri
chr.trna65 (3457850-3457775) Length: 76 bp
Type: Ala Anticodon: GGC at 34-36 (3457817-3457815) Score: 86.05
Seq: GGGGCATTAGCTCAGCTGGGAGAGCGCTTCGCTGGCAGCGAAGAGGtCAGCGGTTCGAGCCCGCTATGCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna13 (124135-124210) Length: 76 bp
Type: Ala Anticodon: TGC at 34-36 (124168-124170) Score: 92.94
Seq: GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGtCAGCGGTTCGATCCCGCTAGGCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna23 (283049-283124) Length: 76 bp
Type: Ala Anticodon: TGC at 34-36 (283082-283084) Score: 92.94
Seq: GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGtCAGCGGTTCGATCCCGCTAGGCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna37 (658293-658368) Length: 76 bp
Type: Ala Anticodon: TGC at 34-36 (658326-658328) Score: 92.94
Seq: GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGtCAGCGGTTCGATCCCGCTAGGCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna4 (119466-119541) Length: 76 bp
Type: Ala Anticodon: TGC at 34-36 (119499-119501) Score: 92.94
Seq: GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGtCAGCGGTTCGATCCCGCTAGGCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna68 (2949551-2949476) Length: 76 bp
Type: Ala Anticodon: TGC at 34-36 (2949518-2949516) Score: 92.94
Seq: GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGtCAGCGGTTCGATCCCGCTAGGCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna11 (123973-124049) Length: 77 bp
Type: Arg Anticodon: ACG at 35-37 (124007-124009) Score: 81.43
Seq: GCGCCCGTAGCTCAATTGGAtAGAGCGTTTGACTACGGATCAAAAGGtTAGGGGTTCGACTCCTCTCGGGCGCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna31 (558683-558759) Length: 77 bp
Type: Arg Anticodon: ACG at 35-37 (558717-558719) Score: 81.43
Seq: GCGCCCGTAGCTCAATTGGAtAGAGCGTTTGACTACGGATCAAAAGGtTAGGGGTTCGACTCCTCTCGGGCGCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna53 (1025355-1025431) Length: 77 bp
Type: Arg Anticodon: ACG at 35-37 (1025389-1025391) Score: 81.43
Seq: GCGCCCGTAGCTCAATTGGAtAGAGCGTTTGACTACGGATCAAAAGGtTAGGGGTTCGACTCCTCTCGGGCGCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna75 (2948769-2948693) Length: 77 bp
Type: Arg Anticodon: ACG at 35-37 (2948735-2948733) Score: 81.43
Seq: GCGCCCGTAGCTCAATTGGAtAGAGCGTTTGACTACGGATCAAAAGGtTAGGGGTTCGACTCCTCTCGGGCGCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna77 (2876706-2876632) Length: 75 bp
Type: Arg Anticodon: CCG at 34-36 (2876673-2876671) Score: 60.68
Seq: GCGCCTATGGTGAAAGGGAtATCACACGAGATTCCGGTTCTCGCGtTGTGGGTTCGAATCCTGCTAGGCGCGCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
chr.trna67 (3188115-3188039) Length: 77 bp
Type: Arg Anticodon: TCT at 35-37 (3188081-3188079) Score: 91.41
Seq: GTCCCAGTAGCTCAGCTGGAtAGAGCAACGGCCTTCTAAGCCGTCGGtCGGGAGTTCGAATCTCTCCTGGGACGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna14 (267531-267605) Length: 75 bp
Type: Asn Anticodon: GTT at 33-35 (267563-267565) Score: 89.39
Seq: TCCACAGTAGCTCAGTGGTAGAGCAATCGGCTGTTAACCGATCGGtCGTAGGTTCGAGTCCTACCTGTGGAGCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna38 (1023797-1023871) Length: 75 bp
Type: Asn Anticodon: GTT at 33-35 (1023829-1023831) Score: 89.39
Seq: TCCACAGTAGCTCAGTGGTAGAGCAATCGGCTGTTAACCGATCGGtCGTAGGTTCGAGTCCTACCTGTGGAGCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna55 (1491438-1491512) Length: 75 bp
Type: Asn Anticodon: GTT at 33-35 (1491470-1491472) Score: 89.39
Seq: TCCACAGTAGCTCAGTGGTAGAGCAATCGGCTGTTAACCGATCGGtCGTAGGTTCGAGTCCTACCTGTGGAGCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna24 (558019-558093) Length: 75 bp
Type: Asn Anticodon: GTT at 33-35 (558051-558053) Score: 92.27
Seq: TCCGCAGTAGCTCAGTGGTAGAGCAATCGGCTGTTAACCGATCGGtCGTAGGTTCGAGTCCTACCTGCGGAGCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna28 (558388-558464) Length: 77 bp
Type: Asp Anticodon: GTC at 35-37 (558422-558424) Score: 95.80
Seq: GGTCCGGTAGTTCAGTTGGTtAGAATGCCTGCCTGTCACGCAGGAGGtCGCGGGTTCGAGTCCCGTCCGGACCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna43 (1024418-1024494) Length: 77 bp
Type: Asp Anticodon: GTC at 35-37 (1024452-1024454) Score: 95.80
Seq: GGTCCGGTAGTTCAGTTGGTtAGAATGCCTGCCTGTCACGCAGGAGGtCGCGGGTTCGAGTCCCGTCCGGACCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna62 (4163805-4163729) Length: 77 bp
Type: Asp Anticodon: GTC at 35-37 (4163771-4163769) Score: 95.80
Seq: GGTCCGGTAGTTCAGTTGGTtAGAATGCCTGCCTGTCACGCAGGAGGtCGCGGGTTCGAGTCCCGTCCGGACCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna51 (1025154-1025224) Length: 71 bp
Type: Cys Anticodon: GCA at 33-35 (1025186-1025188) Score: 67.13
Seq: GGCGGCATAGCCAAGTGGTAAGGCACGGGTCTGCAAAACCCTTAtCCCCGGTTCGAATCCGGGTGCCGCCT
Str: >>>>>>>..>>>.........<<<..>>>>.......<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna59 (2952402-2952473) Length: 72 bp
Type: Gln Anticodon: TTG at 33-35 (2952434-2952436) Score: 70.66
Seq: TGGGCTATAGCCAAGCGGTAAGGCAACGGACTTTGACTCCGTGATgCGCTGGTTCGAATCCAGCTAGCCCAG
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna20 (282749-282823) Length: 75 bp
Type: Gln Anticodon: TTG at 33-35 (282781-282783) Score: 78.95
Seq: TGGGCTATAGCCAAGCGGTAAGGCAACGGACTTTGACTCCGTGATgCGCTGGTTCGAATCCAGCTAGCCCAGCCA
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna49 (1024993-1025067) Length: 75 bp
Type: Gln Anticodon: TTG at 33-35 (1025025-1025027) Score: 78.95
Seq: TGGGCTATAGCCAAGCGGTAAGGCAACGGACTTTGACTCCGTGATgCGCTGGTTCGAATCCAGCTAGCCCAGCCA
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna73 (2948924-2948850) Length: 75 bp
Type: Gln Anticodon: TTG at 33-35 (2948892-2948890) Score: 78.95
Seq: TGGGCTATAGCCAAGCGGTAAGGCAACGGACTTTGACTCCGTGATgCGCTGGTTCGAATCCAGCTAGCCCAGCCA
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna40 (1023980-1024051) Length: 72 bp
Type: Glu Anticodon: TTC at 34-36 (1024013-1024015) Score: 71.01
Seq: GGCCCGTTGGTCAAGTGGTtAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAATCCCGTACGGGTCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.
chr.trna26 (558197-558271) Length: 75 bp
Type: Glu Anticodon: TTC at 34-36 (558230-558232) Score: 71.62
Seq: GGCCCGTTGGTCAAGTGGTtAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAATCCCGTACGGGTCATCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
chr.trna16 (282063-282137) Length: 75 bp
Type: Glu Anticodon: TTC at 34-36 (282096-282098) Score: 79.30
Seq: GGCCCGTTGGTCAAGTGGTtAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAATCCCGTACGGGTCACCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
chr.trna61 (4163890-4163816) Length: 75 bp
Type: Glu Anticodon: TTC at 34-36 (4163857-4163855) Score: 79.30
Seq: GGCCCGTTGGTCAAGTGGTtAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAATCCCGTACGGGTCACCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
chr.trna22 (282970-283044) Length: 75 bp
Type: Gly Anticodon: GCC at 33-35 (283002-283004) Score: 94.93
Seq: GCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGTGGGGGtCGCGGGTTCGAATCCCGTCTTCCGCTCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna50 (1025072-1025146) Length: 75 bp
Type: Gly Anticodon: GCC at 33-35 (1025104-1025106) Score: 94.93
Seq: GCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGTGGGGGtCGCGGGTTCGAATCCCGTCTTCCGCTCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna74 (2948845-2948771) Length: 75 bp
Type: Gly Anticodon: GCC at 33-35 (2948813-2948811) Score: 94.93
Seq: GCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGTGGGGGtCGCGGGTTCGAATCCCGTCTTCCGCTCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna9 (123771-123845) Length: 75 bp
Type: Gly Anticodon: GCC at 33-35 (123803-123805) Score: 94.93
Seq: GCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGTGGGGGtCGCGGGTTCGAATCCCGTCTTCCGCTCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna76 (2948507-2948437) Length: 71 bp
Type: Gly Anticodon: TCC at 33-35 (2948475-2948473) Score: 73.06
Seq: GCGGGTGTAGTTTAGTGGTAAAACCTCAGCCTTCCAAGCTGATGtCGTGGGTTCGATTCCCATCACCCGCT
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.
chr.trna66 (3188193-3188120) Length: 74 bp
Type: Gly Anticodon: TCC at 33-35 (3188161-3188159) Score: 78.55
Seq: GCGGGTGTAGTTTAGTGGTAAAACCTCAGCCTTCCAAGCTGATGtCGTGAGTTCGATTCTCATCACCCGCTCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
chr.trna33 (558863-558936) Length: 74 bp
Type: Gly Anticodon: TCC at 33-35 (558895-558897) Score: 81.36
Seq: GCGGGTGTAGTTTAGTGGTAAAACCTCAGCCTTCCAAGCTGATGtCGTGGGTTCGATTCCCATCACCCGCTCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
chr.trna48 (1024904-1024979) Length: 76 bp
Type: His Anticodon: GTG at 34-36 (1024937-1024939) Score: 78.04
Seq: GCGACTGTGGCGAAGTGGTtAACGCACCGGATTGTGGCTCCGGCACtCGTGGGTTCGATTCCCATCAGTCGCCCCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna72 (2949015-2948940) Length: 76 bp
Type: His Anticodon: GTG at 34-36 (2948982-2948980) Score: 78.04
Seq: GCGACTGTGGCGAAGTGGTtAACGCACCGGATTGTGGCTCCGGCACtCGTGGGTTCGATTCCCATCAGTCGCCCCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna3 (119378-119454) Length: 77 bp
Type: Ile Anticodon: GAT at 35-37 (119412-119414) Score: 101.27
Seq: GGGCCTGTAGCTCAGCTGGTtAGAGCGCACGCCTGATAAGCGTGAGGtCGGTGGTTCAAGTCCACTCAGGCCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna34 (558976-559052) Length: 77 bp
Type: Ile Anticodon: GAT at 35-37 (559010-559012) Score: 101.27
Seq: GGGCCTGTAGCTCAGCTGGTtAGAGCGCACGCCTGATAAGCGTGAGGtCGGTGGTTCAAGTCCACTCAGGCCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna36 (658205-658281) Length: 77 bp
Type: Ile Anticodon: GAT at 35-37 (658239-658241) Score: 102.39
Seq: GGGCCTGTAGCTCAGCTGGTtAGAGCGCACGCCTGATAAGCGTGAGGtCGGTGGTTCGAGTCCACTCAGGCCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna54 (1039353-1039438) Length: 86 bp
Type: Leu Anticodon: CAA at 35-37 (1039387-1039389) Score: 67.31
Seq: GCCGGTGTGGCGGAATTGGCaGACGCGCACGACTCAAAATCGTGTTCCCTCGTGGAGTGTCGGTTCGACCCCGACCACCGGTACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<...>>.><.<<...>>>>>.......<<<<<<<<<<<<....
chr.trna30 (558590-558673) Length: 84 bp
Type: Leu Anticodon: GAG at 34-36 (558623-558625) Score: 61.41
Seq: GCGGTTGTGGCGGAATGGCaGACGCGCTAGGTTGAGGGCCTAGTGGGGGTTGACCCCGTGGAGGTTCGAGTCCTCTCAACCGCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<..>>>>>><<<<<<..>>>>>.......<<<<<<<<<<<<.
chr.trna10 (123869-123957) Length: 89 bp
Type: Leu Anticodon: TAA at 35-37 (123903-123905) Score: 76.51
Seq: GCCGGGGTGGTGGAATTGGCaGACACACAGGACTTAAAATCCTGCGGTAGGTGACTACCGTGCCGGTTCAAGTCCGGCCCTCGGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>....<<<<<..>>>>>.......<<<<<<<<<<<<....
chr.trna52 (1025251-1025339) Length: 89 bp
Type: Leu Anticodon: TAA at 35-37 (1025285-1025287) Score: 77.63
Seq: GCCGGGGTGGTGGAATTGGCaGACACACAGGACTTAAAATCCTGCGGTAGGTGACTACCGTGCCGGTTCGAGTCCGGCCCTCGGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>....<<<<<..>>>>>.......<<<<<<<<<<<<....
chr.trna29 (558492-558574) Length: 83 bp
Type: Leu Anticodon: TAG at 35-37 (558526-558528) Score: 63.18
Seq: GCGGGTGTGGCGGAATTGGCaGACGCGCTAGACTTAGGATCTAGTGTCCTTGtGACGTGGGGGTTCGACTCCCTTCACCCGCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>.....<<<..>>>>>.......<<<<<<<<<<<<.
chr.trna8 (123679-123764) Length: 86 bp
Type: Leu Anticodon: TAG at 35-37 (123713-123715) Score: 71.48
Seq: GCGGGTGTGGCGGAATTGGCaGACGCGCTAGACTTAGGATCTAGTGTCCTTGtGACGTGGGGGTTCGACTCCCTTCACCCGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>.....<<<..>>>>>.......<<<<<<<<<<<<....
chr.trna21 (282887-282962) Length: 76 bp
Type: Lys Anticodon: TTT at 34-36 (282920-282922) Score: 98.67
Seq: GAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGtCGAAGGTTCGAGTCCTTCATGGCTCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna60 (4163975-4163900) Length: 76 bp
Type: Lys Anticodon: TTT at 34-36 (4163942-4163940) Score: 98.67
Seq: GAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGtCGAAGGTTCGAGTCCTTCATGGCTCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna7 (123595-123670) Length: 76 bp
Type: Lys Anticodon: TTT at 34-36 (123628-123630) Score: 98.67
Seq: GAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGtCGAAGGTTCGAGTCCTTCATGGCTCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna2 (94883-94956) Length: 74 bp
Type: Met Anticodon: CAT at 35-37 (94917-94919) Score: 78.06
Seq: GGCGGTGTAGCTCAGCTGGCtAGAGCGTACGGTTCATACCCGTGAGGtCGGGGGTTCGATTCCCTCCGCCGCTA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna56 (1491519-1491592) Length: 74 bp
Type: Met Anticodon: CAT at 35-37 (1491553-1491555) Score: 78.06
Seq: GGCGGTGTAGCTCAGCTGGCtAGAGCGTACGGTTCATACCCGTGAGGtCGGGGGTTCGATTCCCTCCGCCGCTA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna35 (577380-577453) Length: 74 bp
Type: Met Anticodon: CAT at 35-37 (577414-577416) Score: 79.42
Seq: CGCGGGGTGGAGCAGTCtGGTAGCTCGTCGGGCTCATAACCCGAAGGtCGGCGGTTCAAATCCGTCCCCCGCAA
Str: .>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<..
chr.trna42 (1024337-1024413) Length: 77 bp
Type: Met Anticodon: CAT at 35-37 (1024371-1024373) Score: 87.72
Seq: CGCGGGGTGGAGCAGTCtGGTAGCTCGTCGGGCTCATAACCCGAAGGtCGGCGGTTCAAATCCGTCCCCCGCAACCA
Str: .>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.....
chr.trna70 (2949194-2949118) Length: 77 bp
Type: Met Anticodon: CAT at 35-37 (2949160-2949158) Score: 87.72
Seq: CGCGGGGTGGAGCAGTCtGGTAGCTCGTCGGGCTCATAACCCGAAGGtCGGCGGTTCAAATCCGTCCCCCGCAACCA
Str: .>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.....
chr.trna57 (1491644-1491720) Length: 77 bp
Type: Met Anticodon: CAT at 35-37 (1491678-1491680) Score: 94.46
Seq: GGACCCTTAGCTCAGTTGGTcAGAGCAGTCGGCTCATAACCGATCGGtCGTAGGTTCGAGTCCTACAGGGTCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna44 (1024505-1024580) Length: 76 bp
Type: Phe Anticodon: GAA at 34-36 (1024538-1024540) Score: 94.49
Seq: GGCTCGGTAGCTCAGTCGGTAGAGCAATGGACTGAAAATCCATGTGtCGGCGGTTCGATTCCGTCCCGAGCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna63 (4163719-4163644) Length: 76 bp
Type: Phe Anticodon: GAA at 34-36 (4163686-4163684) Score: 94.49
Seq: GGCTCGGTAGCTCAGTCGGTAGAGCAATGGACTGAAAATCCATGTGtCGGCGGTTCGATTCCGTCCCGAGCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna12 (124055-124131) Length: 77 bp
Type: Pro Anticodon: TGG at 35-37 (124089-124091) Score: 94.03
Seq: CGGGAAGTAGCTCAGCTtGGTAGAGCACTTGGTTTGGGACCAAGGGGtCGCAGGTTCAAATCCTGTCTTCCCGACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna32 (558780-558856) Length: 77 bp
Type: Pro Anticodon: TGG at 35-37 (558814-558816) Score: 94.03
Seq: CGGGAAGTAGCTCAGCTtGGTAGAGCACTTGGTTTGGGACCAAGGGGtCGCAGGTTCAAATCCTGTCTTCCCGACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna25 (558096-558186) Length: 91 bp
Type: Ser Anticodon: GCT at 35-37 (558130-558132) Score: 74.12
Seq: GGAGAAGTACCCAAGTGGCtgAAGGGGCTCCCCTGCTAAGGGAGTAGGTCGTGTGAGCGGCGCGAGGGTTCAAATCCCTCCTTCTCCGCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<...>>>>>....<<<<<..>>>>>.......<<<<<<<<<<<<....
chr.trna39 (1023873-1023966) Length: 94 bp
Type: Ser Anticodon: GGA at 36-38 (1023908-1023910) Score: 70.64
Seq: GGAGAGCTGTCCGAGTTGGCcgAAGGAGCACGATTGGAAATCGTGTAGGCGGTGACAaACCGTCTCGAGGGTTCGAATCCCTCGCTCTCCGCCA
Str: >>>>>>>..>>>............<<<.>>>>>.......<<<<<.>>>>>>>.....<<<<<<<.>>>>>.......<<<<<<<<<<<<....
chr.trna1 (45480-45572) Length: 93 bp
Type: Ser Anticodon: TGA at 37-39 (45516-45518) Score: 79.08
Seq: GGAGGAGTACCCAAGTCtGGCtgAAGGGATCGGTCTTGAAAACCGACAGGCGGGTTAAACCGCGCGGGGGTTCGAATCCCTCCTCCTCCGCCA
Str: >>>>>>>..>>>.............<<<.>>>>>.......<<<<<...>>>>......<<<<..>>>>>.......<<<<<<<<<<<<....
chr.trna58 (1491735-1491827) Length: 93 bp
Type: Ser Anticodon: TGA at 37-39 (1491771-1491773) Score: 79.08
Seq: GGAGGAGTACCCAAGTCtGGCtgAAGGGATCGGTCTTGAAAACCGACAGGCGGGTTAAACCGCGCGGGGGTTCGAATCCCTCCTCCTCCGCCA
Str: >>>>>>>..>>>.............<<<.>>>>>.......<<<<<...>>>>......<<<<..>>>>>.......<<<<<<<<<<<<....
chr.trna69 (2949458-2949366) Length: 93 bp
Type: Ser Anticodon: TGA at 37-39 (2949422-2949420) Score: 79.08
Seq: GGAGGAGTACCCAAGTCtGGCtgAAGGGATCGGTCTTGAAAACCGACAGGCGGGTTAAACCGCGCGGGGGTTCGAATCCCTCCTCCTCCGCCA
Str: >>>>>>>..>>>.............<<<.>>>>>.......<<<<<...>>>>......<<<<..>>>>>.......<<<<<<<<<<<<....
chr.trna15 (267613-267685) Length: 73 bp
Type: Thr Anticodon: GGT at 34-36 (267646-267648) Score: 77.38
Seq: GCTTCCATAGCTCAGTCGGTAGAGCACTACCATGGTAAGGTAGGGGtCAGCGGTTCAAGTCCGCTTGGAAGCT
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna18 (282562-282634) Length: 73 bp
Type: Thr Anticodon: TGT at 34-36 (282595-282597) Score: 82.36
Seq: GCCGGTCTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGtTGGGGGTTCAAGTCCTCTGGCCGGCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna6 (123515-123587) Length: 73 bp
Type: Thr Anticodon: TGT at 34-36 (123548-123550) Score: 82.36
Seq: GCCGGTCTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGtTGGGGGTTCAAGTCCTCTGGCCGGCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna64 (4163258-4163186) Length: 73 bp
Type: Thr Anticodon: TGT at 34-36 (4163225-4163223) Score: 82.36
Seq: GCCGGTCTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGtTGGGGGTTCAAGTCCTCTGGCCGGCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna45 (1024586-1024661) Length: 76 bp
Type: Thr Anticodon: TGT at 34-36 (1024619-1024621) Score: 90.66
Seq: GCCGGTCTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGtTGGGGGTTCAAGTCCTCTGGCCGGCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna47 (1024812-1024885) Length: 74 bp
Type: Trp Anticodon: CCA at 33-35 (1024844-1024846) Score: 71.01
Seq: AGGGGCATAGTTTAACGGTAGAACAGAGGTCTCCAAAACCTCCGGTGTGGGTTCGATTCCTACTGCCCCTGCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
chr.trna19 (282656-282740) Length: 85 bp
Type: Tyr Anticodon: GTA at 35-37 (282690-282692) Score: 80.73
Seq: GGAGGGGTAGCGAAGTGGCtaAACGCGGCGGACTGTAAATCCGCTCCCTCAGGGTtCGGCGGTTCGAATCCGTCCCCCTCCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>...<<<...>>>>>.......<<<<<<<<<<<<....
chr.trna46 (1024716-1024800) Length: 85 bp
Type: Tyr Anticodon: GTA at 35-37 (1024750-1024752) Score: 80.73
Seq: GGAGGGGTAGCGAAGTGGCtaAACGCGGCGGACTGTAAATCCGCTCCCTCAGGGTtCGGCGGTTCGAATCCGTCCCCCTCCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>...<<<...>>>>>.......<<<<<<<<<<<<....
chr.trna71 (2949112-2949028) Length: 85 bp
Type: Tyr Anticodon: GTA at 35-37 (2949078-2949076) Score: 80.73
Seq: GGAGGGGTAGCGAAGTGGCtaAACGCGGCGGACTGTAAATCCGCTCCCTCAGGGTtCGGCGGTTCGAATCCGTCCCCCTCCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>...<<<...>>>>>.......<<<<<<<<<<<<....
chr.trna78 (2860288-2860216) Length: 73 bp
Type: Val Anticodon: GAC at 34-36 (2860255-2860253) Score: 69.44
Seq: GATCCGTTAGCTCAGTTGGGAGAGCGCTACCTTGACAGGGTAGAGGtCACTGGTTCGAGCCCAGTACGGGTCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
chr.trna17 (282231-282306) Length: 76 bp
Type: Val Anticodon: TAC at 34-36 (282264-282266) Score: 94.22
Seq: GGAGGATTAGCTCAGCTGGGAGAGCACCTGCCTTACAAGCAGGGGGtCGGCAGTTCGATCCTGTCATCCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna41 (1024086-1024161) Length: 76 bp
Type: Val Anticodon: TAC at 34-36 (1024119-1024121) Score: 94.22
Seq: GGAGGATTAGCTCAGCTGGGAGAGCACCTGCCTTACAAGCAGGGGGtCGGCAGTTCGATCCTGTCATCCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna27 (558305-558380) Length: 76 bp
Type: Val Anticodon: TAC at 34-36 (558338-558340) Score: 97.03
Seq: GGAGGATTAGCTCAGCTGGGAGAGCACCTGCCTTACAAGCAGGGGGtCGGCGGTTCGATCCCGTCATCCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
chr.trna5 (123398-123473) Length: 76 bp
Type: Val Anticodon: TAC at 34-36 (123431-123433) Score: 97.15
Seq: GGAGGGTTAGCTCAGCTGGGAGAGCACCTGCCTTACAAGCAGGGGGtCGGCGGTTCGATCCCGTCACCCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
The Genomic tRNA Database is curated by Todd Lowe and Patricia Chan.
Please email lowe@soe.ucsc.edu
with any questions and comments. To submit corrections, please use our
Bug and Request Tracking System.