GtRNAdb

tRNAscan-SE Analysis of Bacillus anthracis str Sterne

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>> Genome Seq
Predicted tRNA Secondary Structures


Click on "View tRNA" buttons to view 2-D tRNA structures

Cove-predicted tRNA secondary structures rendered by NAVIEW (c) 1988 Robert E. Bruccoleri


chr.trna16 (151061-151133)	Length: 73 bp
Type: Ala	Anticodon: TGC at 34-36 (151094-151096)	Score: 85.62
Seq: GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGtCAGCGGTTCGATCCCGCTAGGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna54 (746998-747070)	Length: 73 bp
Type: Ala	Anticodon: TGC at 34-36 (747031-747033)	Score: 85.62
Seq: GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGtCAGCGGTTCGATCCCGCTAGGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna78 (4652396-4652324)	Length: 73 bp
Type: Ala	Anticodon: TGC at 34-36 (4652363-4652361)	Score: 85.62
Seq: GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGtCAGCGGTTCGATCCCGCTAGGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna2 (11078-11153)	Length: 76 bp
Type: Ala	Anticodon: TGC at 34-36 (11111-11113)	Score: 93.92
Seq: GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGtCAGCGGTTCGATCCCGCTAGGCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna5 (30872-30947)	Length: 76 bp
Type: Ala	Anticodon: TGC at 34-36 (30905-30907)	Score: 93.92
Seq: GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGtCAGCGGTTCGATCCCGCTAGGCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna52 (746824-746897)	Length: 74 bp
Type: Arg	Anticodon: ACG at 35-37 (746858-746860)	Score: 69.97
Seq: GCGCCCGTAGCTCAATTGGAtAGAGCGTTTGACTACGGATCAAGAGGtTAGGGGTTCGACTCCTCTCGGGCGCG
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna76 (4652569-4652496)	Length: 74 bp
Type: Arg	Anticodon: ACG at 35-37 (4652535-4652533)	Score: 69.97
Seq: GCGCCCGTAGCTCAATTGGAtAGAGCGTTTGACTACGGATCAAGAGGtTAGGGGTTCGACTCCTCTCGGGCGCG
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna25 (245915-245991)	Length: 77 bp
Type: Arg	Anticodon: ACG at 35-37 (245949-245951)	Score: 78.27
Seq: GCGCCCGTAGCTCAATTGGAtAGAGCGTTTGACTACGGATCAAGAGGtTAGGGGTTCGACTCCTCTCGGGCGCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna69 (4868777-4868699)	Length: 79 bp
Type: Arg	Anticodon: CCG at 35-37 (4868743-4868741)	Score: 62.69
Seq: GCGCCCATAGCTCAGTCGGAtAGAGCGGTGGTTTCCGGTACCACGTCTGcCGGGGGTTCGAATCCCTCTGGGCGCGTCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.......>>>>>.......<<<<<<<<<<<<....
                    
chr.trna93 (4288076-4288000)	Length: 77 bp
Type: Arg	Anticodon: TCT at 35-37 (4288042-4288040)	Score: 79.49
Seq: GTCCCAGTAGCTCAGCCGGAtAGAGCATACGCCTTCTAAGCGTACGGtCGGGAGTTCGAATCTCTCCTGGGACGCTA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna30 (537315-537389)	Length: 75 bp
Type: Asn	Anticodon: GTT at 33-35 (537347-537349)	Score: 86.53
Seq: TCCGCAGTAGCTCAGCGGTAGAGCTATCGGCTGTTAACCGATCGGtCGTAGGTTCGATTCCTACCTGCGGAGCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna17 (245022-245096)	Length: 75 bp
Type: Asn	Anticodon: GTT at 33-35 (245054-245056)	Score: 88.32
Seq: TCCGCAGTAGCTCAGTGGTAGAGCTATCGGCTGTTAACCGATCGGtCGTAGGTTCGAGTCCTACCTGCGGAGCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna63 (747846-747920)	Length: 75 bp
Type: Asn	Anticodon: GTT at 33-35 (747878-747880)	Score: 88.32
Seq: TCCGCAGTAGCTCAGTGGTAGAGCTATCGGCTGTTAACCGATCGGtCGTAGGTTCGAGTCCTACCTGCGGAGCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna8 (150320-150394)	Length: 75 bp
Type: Asn	Anticodon: GTT at 33-35 (150352-150354)	Score: 88.32
Seq: TCCGCAGTAGCTCAGTGGTAGAGCTATCGGCTGTTAACCGATCGGtCGTAGGTTCGAGTCCTACCTGCGGAGCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna89 (4651412-4651338)	Length: 75 bp
Type: Asn	Anticodon: GTT at 33-35 (4651380-4651378)	Score: 88.32
Seq: TCCGCAGTAGCTCAGTGGTAGAGCTATCGGCTGTTAACCGATCGGtCGTAGGTTCGAGTCCTACCTGCGGAGCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna21 (245400-245475)	Length: 76 bp
Type: Asp	Anticodon: GTC at 34-36 (245433-245435)	Score: 76.06
Seq: GGTCCCGTGGTGTAGTGGTtAACATGCCTGCCTGTCACGCAGGAGAtCGCCGGTTCGACCCCGGTCGGGACCGCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna29 (251098-251173)	Length: 76 bp
Type: Asp	Anticodon: GTC at 34-36 (251131-251133)	Score: 76.06
Seq: GGTCCCGTGGTGTAGTGGTtAACATGCCTGCCTGTCACGCAGGAGAtCGCCGGTTCGACCCCGGTCGGGACCGCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna35 (537761-537836)	Length: 76 bp
Type: Asp	Anticodon: GTC at 34-36 (537794-537796)	Score: 76.06
Seq: GGTCCCGTGGTGTAGTGGTtAACATGCCTGCCTGTCACGCAGGAGAtCGCCGGTTCGACCCCGGTCGGGACCGCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna58 (747432-747507)	Length: 76 bp
Type: Asp	Anticodon: GTC at 34-36 (747465-747467)	Score: 76.06
Seq: GGTCCCGTGGTGTAGTGGTtAACATGCCTGCCTGTCACGCAGGAGAtCGCCGGTTCGACCCCGGTCGGGACCGCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna67 (5208235-5208160)	Length: 76 bp
Type: Asp	Anticodon: GTC at 34-36 (5208202-5208200)	Score: 76.06
Seq: GGTCCCGTGGTGTAGTGGTtAACATGCCTGCCTGTCACGCAGGAGAtCGCCGGTTCGACCCCGGTCGGGACCGCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna83 (4651930-4651855)	Length: 76 bp
Type: Asp	Anticodon: GTC at 34-36 (4651897-4651895)	Score: 76.06
Seq: GGTCCCGTGGTGTAGTGGTtAACATGCCTGCCTGTCACGCAGGAGAtCGCCGGTTCGACCCCGGTCGGGACCGCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna43 (538518-538588)	Length: 71 bp
Type: Cys	Anticodon: GCA at 33-35 (538550-538552)	Score: 71.27
Seq: GGCGGCATAGCCAAGTGGTAAGGCAGAGGTCTGCAAAACCTTTAtCACCGGTTCAAATCCGGTTGCCGCCT
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna13 (150818-150892)	Length: 75 bp
Type: Gln	Anticodon: TTG at 33-35 (150850-150852)	Score: 78.60
Seq: TGGGCTATAGCCAAGCGGTAAGGCAACGGACTTTGACTCCGTCATgCGCTGGTTCGAATCCAGCTAGCCCAGCCA
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna22 (245564-245638)	Length: 75 bp
Type: Gln	Anticodon: TTG at 33-35 (245596-245598)	Score: 78.60
Seq: TGGGCTATAGCCAAGCGGTAAGGCAACGGACTTTGACTCCGTCATgCGCTGGTTCGAATCCAGCTAGCCCAGCCA
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna41 (538349-538423)	Length: 75 bp
Type: Gln	Anticodon: TTG at 33-35 (538381-538383)	Score: 78.60
Seq: TGGGCTATAGCCAAGCGGTAAGGCAACGGACTTTGACTCCGTCATgCGCTGGTTCGAATCCAGCTAGCCCAGCCA
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna47 (746362-746436)	Length: 75 bp
Type: Gln	Anticodon: TTG at 33-35 (746394-746396)	Score: 78.60
Seq: TGGGCTATAGCCAAGCGGTAAGGCAACGGACTTTGACTCCGTCATgCGCTGGTTCGAATCCAGCTAGCCCAGCCA
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna64 (747922-747993)	Length: 72 bp
Type: Glu	Anticodon: TTC at 34-36 (747955-747957)	Score: 71.01
Seq: GGCCCGTTGGTCAAGTGGTtAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAATCCCGTACGGGTCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna66 (5208327-5208256)	Length: 72 bp
Type: Glu	Anticodon: TTC at 34-36 (5208294-5208292)	Score: 71.01
Seq: GGCCCGTTGGTCAAGTGGTtAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAATCCCGTACGGGTCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna7 (64513-64584)	Length: 72 bp
Type: Glu	Anticodon: TTC at 34-36 (64546-64548)	Score: 71.01
Seq: GGCCCGTTGGTCAAGTGGTtAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAATCCCGTACGGGTCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna91 (4651233-4651162)	Length: 72 bp
Type: Glu	Anticodon: TTC at 34-36 (4651200-4651198)	Score: 71.01
Seq: GGCCCGTTGGTCAAGTGGTtAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAATCCCGTACGGGTCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna10 (150496-150570)	Length: 75 bp
Type: Glu	Anticodon: TTC at 34-36 (150529-150531)	Score: 72.70
Seq: GGCCCGTTGGTCAAGTGGTtAAGACACCGCCCTTTCACGGCGGTAAAACGGGTTCGAATCCCGTACGGGTCACCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna19 (245199-245273)	Length: 75 bp
Type: Glu	Anticodon: TTC at 34-36 (245232-245234)	Score: 75.64
Seq: GGCCTGTTGGTCAAGTGGTtAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAATCCCGTACGGGTCACCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna32 (537501-537575)	Length: 75 bp
Type: Glu	Anticodon: TTC at 34-36 (537534-537536)	Score: 79.30
Seq: GGCCCGTTGGTCAAGTGGTtAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAATCCCGTACGGGTCACCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna15 (150979-151050)	Length: 72 bp
Type: Gly	Anticodon: GCC at 33-35 (151011-151013)	Score: 80.56
Seq: GCGGAAGTAGTTCAGTGGTAGAATACAACCTTGCCAAGGTTGGGGtCGCGGGTTCGAATCCCGTCTTCCGCT
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna42 (538429-538503)	Length: 75 bp
Type: Gly	Anticodon: GCC at 33-35 (538461-538463)	Score: 88.86
Seq: GCGGAAGTAGTTCAGTGGTAGAATACAACCTTGCCAAGGTTGGGGtCGCGGGTTCGAATCCCGTCTTCCGCTCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna50 (746641-746715)	Length: 75 bp
Type: Gly	Anticodon: GCC at 33-35 (746673-746675)	Score: 88.86
Seq: GCGGAAGTAGTTCAGTGGTAGAATACAACCTTGCCAAGGTTGGGGtCGCGGGTTCGAATCCCGTCTTCCGCTCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna74 (4652752-4652678)	Length: 75 bp
Type: Gly	Anticodon: GCC at 33-35 (4652720-4652718)	Score: 88.86
Seq: GCGGAAGTAGTTCAGTGGTAGAATACAACCTTGCCAAGGTTGGGGtCGCGGGTTCGAATCCCGTCTTCCGCTCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna27 (246074-246144)	Length: 71 bp
Type: Gly	Anticodon: TCC at 33-35 (246106-246108)	Score: 71.78
Seq: GCGGGTGTAGTTTAGTGGTAAAACAAGAGCCTTCCAAGCTCTGGtCGAGAGTTCGATTCTCTTCACCCGCT
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna87 (4651577-4651507)	Length: 71 bp
Type: Gly	Anticodon: TCC at 33-35 (4651545-4651543)	Score: 71.78
Seq: GCGGGTGTAGTTTAGTGGTAAAACAAGAGCCTTCCAAGCTCTGGtCGAGAGTTCGATTCTCTTCACCCGCT
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna45 (543114-543187)	Length: 74 bp
Type: Gly	Anticodon: TCC at 33-35 (543146-543148)	Score: 80.08
Seq: GCGGGTGTAGTTTAGTGGTAAAACAAGAGCCTTCCAAGCTCTGGtCGAGAGTTCGATTCTCTTCACCCGCTCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna92 (4288151-4288078)	Length: 74 bp
Type: Gly	Anticodon: TCC at 33-35 (4288119-4288117)	Score: 80.08
Seq: GCGGGTGTAGTTTAGTGGTAAAACAAGAGCCTTCCAAGCTCTGGtCGAGAGTTCGATTCTCTTCACCCGCTCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna40 (538210-538285)	Length: 76 bp
Type: His	Anticodon: GTG at 34-36 (538243-538245)	Score: 74.61
Seq: GCGGTTGTGGCGAAGTGGTtAACGCACCGGATTGTGGCTCCGGCATtCGTGGGTTCGATTCCCATCAGTCGCCCCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna72 (4652960-4652885)	Length: 76 bp
Type: His	Anticodon: GTG at 34-36 (4652927-4652925)	Score: 74.61
Seq: GCGGTTGTGGCGAAGTGGTtAACGCACCGGATTGTGGCTCCGGCATtCGTGGGTTCGATTCCCATCAGTCGCCCCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna1 (10993-11069)	Length: 77 bp
Type: Ile	Anticodon: GAT at 35-37 (11027-11029)	Score: 101.21
Seq: GGGCCTATAGCTCAGCTGGTtAGAGCGCACGCCTGATAAGCGTGAGGtCGATGGTTCGAGTCCATTTAGGCCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna4 (30787-30863)	Length: 77 bp
Type: Ile	Anticodon: GAT at 35-37 (30821-30823)	Score: 101.21
Seq: GGGCCTATAGCTCAGCTGGTtAGAGCGCACGCCTGATAAGCGTGAGGtCGATGGTTCGAGTCCATTTAGGCCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna88 (4651496-4651420)	Length: 77 bp
Type: Ile	Anticodon: GAT at 35-37 (4651462-4651460)	Score: 101.21
Seq: GGGCCTATAGCTCAGCTGGTtAGAGCGCACGCCTGATAAGCGTGAGGtCGATGGTTCGAGTCCATTTAGGCCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna62 (747761-747837)	Length: 77 bp
Type: Ile	Anticodon: GAT at 35-37 (747795-747797)	Score: 94.98
Seq: GGGCCTATAGCTCAGCTGGTtAGAGCGCACGCCTGATAAGCGTGAGGtCGATGGTTCGAGTCCATTTAGACCCACCA
Str: >>>.>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<.<<<....
                    
chr.trna44 (538599-538683)	Length: 85 bp
Type: Leu	Anticodon: CAA at 35-37 (538633-538635)	Score: 60.08
Seq: GCCGATGTGGCGGAATTGGCaGACGCGCACGACTCAAAATCGTGTTCCTTCGGGAGTGTCGGTTCGACCCCGACCATCGGTATCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>..<<<<..>>>>>.......<<<<<<<<<<<<....
                    
chr.trna24 (245734-245819)	Length: 86 bp
Type: Leu	Anticodon: GAG at 34-36 (245767-245769)	Score: 57.19
Seq: GCGGTCGTGGCGGAACGGCaGACGCGCTAGGTTGAGGGCCTAGTGGGGGAAACCCCGTGGAGGTTCAAGTCCTCTCGGCCGCATCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>....<<<<..>>>>>.......<<<<<<<<<<<<....
                    
chr.trna51 (746732-746820)	Length: 89 bp
Type: Leu	Anticodon: TAA at 35-37 (746766-746768)	Score: 71.28
Seq: GCCGGGGTGGCGGAACAGGCaGACGCACAGGACTTAAAATCCTGCGGTGGGTGACCACCGTGCGGGTTCGACCCCCGCCCTCGGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>....<<<<<..>>>>>.......<<<<<<<<<<<<....
                    
chr.trna75 (4652661-4652573)	Length: 89 bp
Type: Leu	Anticodon: TAA at 35-37 (4652627-4652625)	Score: 71.28
Seq: GCCGGGGTGGCGGAACAGGCaGACGCACAGGACTTAAAATCCTGCGGTGGGTGACCACCGTGCGGGTTCGACCCCCGCCCTCGGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>....<<<<<..>>>>>.......<<<<<<<<<<<<....
                    
chr.trna49 (746531-746611)	Length: 81 bp
Type: Leu	Anticodon: TAG at 35-37 (746565-746567)	Score: 66.65
Seq: GCGGGTGTGGCGGAATTGGCaGACGCACTAGACTTAGGATCTAGCGCCTTTGGCGTGGGGGTTCGACTCCCTTCACCCGCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>...<<<..>>>>>.......<<<<<<<<<<<<.
                    
chr.trna73 (4652862-4652782)	Length: 81 bp
Type: Leu	Anticodon: TAG at 35-37 (4652828-4652826)	Score: 67.96
Seq: GCGGGTGTGGCGGAATTGGCaGACGCACCAGACTTAGGATCTGGCGCCTTTGGCGTGGGGGTTCGACTCCCTTCACCCGCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>...<<<..>>>>>.......<<<<<<<<<<<<.
                    
chr.trna23 (245644-245716)	Length: 73 bp
Type: Lys	Anticodon: TTT at 34-36 (245677-245679)	Score: 90.38
Seq: GAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGtCGAAGGTTCGAGTCCTTCATGGCTCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna14 (150898-150973)	Length: 76 bp
Type: Lys	Anticodon: TTT at 34-36 (150931-150933)	Score: 98.67
Seq: GAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGtCGAAGGTTCGAGTCCTTCATGGCTCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna48 (746441-746516)	Length: 76 bp
Type: Lys	Anticodon: TTT at 34-36 (746474-746476)	Score: 98.67
Seq: GAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGtCGAAGGTTCGAGTCCTTCATGGCTCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna65 (5208416-5208341)	Length: 76 bp
Type: Lys	Anticodon: TTT at 34-36 (5208383-5208381)	Score: 98.67
Seq: GAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGtCGAAGGTTCGAGTCCTTCATGGCTCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna86 (4651666-4651591)	Length: 76 bp
Type: Lys	Anticodon: TTT at 34-36 (4651633-4651631)	Score: 98.67
Seq: GAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGtCGAAGGTTCGAGTCCTTCATGGCTCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna6 (64426-64499)	Length: 74 bp
Type: Met	Anticodon: CAT at 35-37 (64460-64462)	Score: 75.69
Seq: GGCGGTGTAGCTCAGCTGGCtAGAGCGTACGGTTCATACCCGTGAGGtCGGGGGTTCGATCCCCTCCGCCGCTA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna79 (4652303-4652227)	Length: 77 bp
Type: Met	Anticodon: CAT at 35-37 (4652269-4652267)	Score: 78.26
Seq: GGCGGTGTAGCTCAGCTGGCtAGAGCGTATGGTTCATACCCGTGAGGtCGGGGGTTCGATCCCCTCCGCCGCTACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna34 (537681-537757)	Length: 77 bp
Type: Met	Anticodon: CAT at 35-37 (537715-537717)	Score: 80.72
Seq: CGCGGGGTGGAGCAGCACGTtAGCTCGTCGGGCTCATAACCCGAAGGtCGCAGGTTCAAATCCTGTCCCCGCAACCA
Str: .>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.....
                    
chr.trna28 (251018-251094)	Length: 77 bp
Type: Met	Anticodon: CAT at 35-37 (251052-251054)	Score: 85.35
Seq: CGCGGGGTGGAGCAGCAcGGTAGCTCGTCGGGCTCATAACCCGAAGGtCGCAGGTTCAAATCCTGTCCCCGCAACCA
Str: .>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.....
                    
chr.trna57 (747351-747427)	Length: 77 bp
Type: Met	Anticodon: CAT at 35-37 (747385-747387)	Score: 85.35
Seq: CGCGGGGTGGAGCAGCAcGGTAGCTCGTCGGGCTCATAACCCGAAGGtCGCAGGTTCAAATCCTGTCCCCGCAACCA
Str: .>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.....
                    
chr.trna94 (4095157-4095084)	Length: 74 bp
Type: Met	Anticodon: CAT at 35-37 (4095123-4095121)	Score: 88.27
Seq: GGACCCTTAGCTCAGCTGGTtAGAGCAGACGGCTCATAACCGTCCGGtCGTAGGTTCGAGTCCTACAGGGTCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna82 (4652008-4651932)	Length: 77 bp
Type: Met	Anticodon: CAT at 35-37 (4651974-4651972)	Score: 89.08
Seq: CGCGGGGTGGAGCAGTCtGGTAGCTCGTCGGGCTCATAACCCGAAGGtCGCAGGTTCAAATCCTGTCCCCGCAACCA
Str: .>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.....
                    
chr.trna80 (4652222-4652146)	Length: 77 bp
Type: Met	Anticodon: CAT at 35-37 (4652188-4652186)	Score: 96.69
Seq: GGACCTTTAGCTCAGCTGGTtAGAGCAGACGGCTCATAACCGTCCGGtCGTAGGTTCGAGTCCTACAAGGTCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna68 (5208118-5208046)	Length: 73 bp
Type: Phe	Anticodon: GAA at 34-36 (5208085-5208083)	Score: 84.57
Seq: GGCTCGGTAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGtCGGCGGTTCGATTCCGTCCCGAGCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna84 (4651842-4651767)	Length: 76 bp
Type: Phe	Anticodon: GAA at 34-36 (4651809-4651807)	Score: 86.60
Seq: GGCTCGGTAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGtCGGCGGTTCGATTCCGTCCCGATCCACCA
Str: >>.>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<.<<....
                    
chr.trna36 (537846-537921)	Length: 76 bp
Type: Phe	Anticodon: GAA at 34-36 (537879-537881)	Score: 92.86
Seq: GGCTCGGTAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGtCGGCGGTTCGATTCCGTCCCGAGCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna59 (747516-747591)	Length: 76 bp
Type: Phe	Anticodon: GAA at 34-36 (747549-747551)	Score: 92.86
Seq: GGCTCGGTAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGtCGGCGGTTCGATTCCGTCCCGAGCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna53 (746908-746981)	Length: 74 bp
Type: Pro	Anticodon: TGG at 35-37 (746942-746944)	Score: 85.68
Seq: CGGGAAGTGGCTCAGCTtGGTAGAGCACCTGGTTTGGGACCAGGGGGtCGCAGGTTCAAATCCTGTCTTCCCGA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna77 (4652485-4652412)	Length: 74 bp
Type: Pro	Anticodon: TGG at 35-37 (4652451-4652449)	Score: 85.68
Seq: CGGGAAGTGGCTCAGCTtGGTAGAGCACCTGGTTTGGGACCAGGGGGtCGCAGGTTCAAATCCTGTCTTCCCGA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna26 (245996-246072)	Length: 77 bp
Type: Pro	Anticodon: TGG at 35-37 (246030-246032)	Score: 93.98
Seq: CGGGAAGTGGCTCAGCTtGGTAGAGCACCTGGTTTGGGACCAGGGGGtCGCAGGTTCAAATCCTGTCTTCCCGACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna18 (245100-245190)	Length: 91 bp
Type: Ser	Anticodon: GCT at 35-37 (245134-245136)	Score: 67.93
Seq: AGAGAAGTACCCAAGTGGCtcAAGGGGCTCCCCTGCTAAGGGAGTAGATCGCGAACGCGGTGCGAGGGTTCGAATCCCTTCTTCTCTGCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<...>>>>>....<<<<<..>>>>>.......<<<<<<<<<<<<....
                    
chr.trna90 (4651330-4651240)	Length: 91 bp
Type: Ser	Anticodon: GCT at 35-37 (4651296-4651294)	Score: 67.93
Seq: AGAGAAGTACCCAAGTGGCtcAAGGGGCTCCCCTGCTAAGGGAGTAGATCGCGAACGCGGTGCGAGGGTTCGAATCCCTTCTTCTCTGCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<...>>>>>....<<<<<..>>>>>.......<<<<<<<<<<<<....
                    
chr.trna31 (537392-537483)	Length: 92 bp
Type: Ser	Anticodon: GGA at 36-38 (537427-537429)	Score: 63.66
Seq: GGAGAGCTGTCCGAGTTGGCcgAAGGAGCACGATTGGAAATCGTGTATACGTCACAAGCGTATCAAGGGTTCGAATCCCTTGCTCTCCGCCA
Str: >>>>>>>..>>>............<<<.>>>>>.......<<<<<.>>>>>>.....<<<<<<.>>>>>.......<<<<<<<<<<<<....
                    
chr.trna55 (747091-747183)	Length: 93 bp
Type: Ser	Anticodon: TGA at 37-39 (747127-747129)	Score: 71.21
Seq: GGAGGTATACCCAAGTTcGGCtgAAGGGATCGGTCTTGAAAACCGACAGGCGGTGAGAATCGCGCGGGGGTTCGAATCCCTCTACCTCCTCCA
Str: >>>>>>>..>>>.............<<<.>>>>>.......<<<<<...>>>>>....<<<<<..>>>>>.......<<<<<<<<<<<<....
                    
chr.trna3 (21770-21862)	Length: 93 bp
Type: Ser	Anticodon: TGA at 37-39 (21806-21808)	Score: 71.57
Seq: GGAGGTATACCCAAGTCtGGCtgAAGGGATCGGTCTTGAAAACCGACAGGCGGCGAGAGTCGCGCGGGGGTTCGAATCCCTCTACCTCCTCCA
Str: >>>>>>>..>>>.............<<<.>>>>>.......<<<<<...>>>>>....<<<<<..>>>>>.......<<<<<<<<<<<<....
                    
chr.trna56 (747238-747330)	Length: 93 bp
Type: Ser	Anticodon: TGA at 37-39 (747274-747276)	Score: 71.91
Seq: GGAGGTATACCCAAGCTcGGCtgAAGGGATCGGTCTTGAAAACCGACAGGCGGCGAGAGTCGCGCGAGGGTTCGAATCCCTCTACCTCCTCCA
Str: >>>>>>>..>>>.............<<<.>>>>>.......<<<<<...>>>>>....<<<<<..>>>>>.......<<<<<<<<<<<<....
                    
chr.trna81 (4652128-4652036)	Length: 93 bp
Type: Ser	Anticodon: TGA at 37-39 (4652092-4652090)	Score: 72.21
Seq: GGAGGTATACCCAAGTTcGGCtgAAGGGATCGGTCTTGAAAACCGACAGGCGGCGAGAGTCGCGCGGGGGTTCGAATCCCTCTACCTCCTCCA
Str: >>>>>>>..>>>.............<<<.>>>>>.......<<<<<...>>>>>....<<<<<..>>>>>.......<<<<<<<<<<<<....
                    
chr.trna9 (150399-150471)	Length: 73 bp
Type: Thr	Anticodon: GGT at 34-36 (150432-150434)	Score: 78.48
Seq: GCTTCCATAGCTCAGCTGGTAGAGCACTTCCATGGTAAGGAAGAGGtCACCGGTTCAAGCCCGGTTGGAAGCT
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna60 (747601-747673)	Length: 73 bp
Type: Thr	Anticodon: TGT at 34-36 (747634-747636)	Score: 87.87
Seq: GCCGGCTTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGtTGGGGGTTCAAGTCCTCTAGCCGGCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna71 (4653045-4652970)	Length: 76 bp
Type: Thr	Anticodon: TGT at 34-36 (4653012-4653010)	Score: 92.70
Seq: GCCGACTTAGCTCAATTGGGAGAGCAACTGACTTGTAATCAGTAGGtTGGGGGTTCAAGTCCTCTAGTCGGCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna37 (537940-538015)	Length: 76 bp
Type: Thr	Anticodon: TGT at 34-36 (537973-537975)	Score: 96.17
Seq: GCCGGCTTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGtTGGGGGTTCAAGTCCTCTAGCCGGCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna85 (4651752-4651677)	Length: 76 bp
Type: Thr	Anticodon: TGT at 34-36 (4651719-4651717)	Score: 96.17
Seq: GCCGGCTTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGtTGGGGGTTCAAGTCCTCTAGCCGGCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna61 (747680-747750)	Length: 71 bp
Type: Trp	Anticodon: CCA at 33-35 (747712-747714)	Score: 53.62
Seq: AGGGGCATAGTTTAAAGGTAGAACTGAGGTCTCCAAAACCTCCAGTGTGGGTTCGATTCCTACTGCCCCTG
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna39 (538117-538190)	Length: 74 bp
Type: Trp	Anticodon: CCA at 33-35 (538149-538151)	Score: 61.92
Seq: AGGGGCATAGTTTAAAGGTAGAACTGAGGTCTCCAAAACCTCCAGTGTGGGTTCGATTCCTACTGCCCCTGCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna12 (150669-150752)	Length: 84 bp
Type: Tyr	Anticodon: GTA at 35-37 (150703-150705)	Score: 77.59
Seq: GGAGGGGTAGCGAAGTGGCtaAACGCGGCGGACTGTAAATCCGCTCCTTCGGGTtCGGCAGTTCGAATCTGCCCCCCTCCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>..<<<...>>>>>.......<<<<<<<<<<<<....
                    
chr.trna38 (538026-538109)	Length: 84 bp
Type: Tyr	Anticodon: GTA at 35-37 (538060-538062)	Score: 77.59
Seq: GGAGGGGTAGCGAAGTGGCtaAACGCGGCGGACTGTAAATCCGCTCCTTCGGGTtCGGCAGTTCGAATCTGCCCCCCTCCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>..<<<...>>>>>.......<<<<<<<<<<<<....
                    
chr.trna95 (1232618-1232546)	Length: 73 bp
Type: Val	Anticodon: GAC at 34-36 (1232585-1232583)	Score: 64.72
Seq: GATCCCGTAGCTCAGCAGGGAGAGCGCCACCTTGACAGGGTGGAGGtCGTGAGTTCGAGCCTCTCCGGGATCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>.>>>.......<<<.<<<<<<<<.
                    
chr.trna11 (150576-150651)	Length: 76 bp
Type: Val	Anticodon: TAC at 34-36 (150609-150611)	Score: 97.03
Seq: GGAGGATTAGCTCAGCTGGGAGAGCACCTGCCTTACAAGCAGGGGGtCGGCGGTTCGATCCCGTCATCCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna20 (245278-245353)	Length: 76 bp
Type: Val	Anticodon: TAC at 34-36 (245311-245313)	Score: 97.03
Seq: GGAGGATTAGCTCAGCTGGGAGAGCACCTGCCTTACAAGCAGGGGGtCGGCGGTTCGATCCCGTCATCCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna33 (537581-537656)	Length: 76 bp
Type: Val	Anticodon: TAC at 34-36 (537614-537616)	Score: 97.03
Seq: GGAGGATTAGCTCAGCTGGGAGAGCACCTGCCTTACAAGCAGGGGGtCGGCGGTTCGATCCCGTCATCCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna46 (746275-746350)	Length: 76 bp
Type: Val	Anticodon: TAC at 34-36 (746308-746310)	Score: 97.03
Seq: GGAGGATTAGCTCAGCTGGGAGAGCACCTGCCTTACAAGCAGGGGGtCGGCGGTTCGATCCCGTCATCCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna70 (4653125-4653050)	Length: 76 bp
Type: Val	Anticodon: TAC at 34-36 (4653092-4653090)	Score: 97.03
Seq: GGAGGATTAGCTCAGCTGGGAGAGCACCTGCCTTACAAGCAGGGGGtCGGCGGTTCGATCCCGTCATCCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
         



The Genomic tRNA Database is curated by Todd Lowe and Patricia Chan. Please email lowe@soe.ucsc.edu with any questions and comments. To submit corrections, please use our Bug and Request Tracking System.